AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94363


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94363.t1 MTR_3g051300 88.710 744 34 2 1 700 1 738 0.0 1341
MS.gene94363.t1 MTR_5g092570 62.800 750 222 4 1 699 1 744 0.0 929
MS.gene94363.t1 MTR_2g102180 47.268 787 321 9 1 700 1 780 0.0 684
MS.gene94363.t1 MTR_4g012050 46.076 790 326 12 1 700 1 780 0.0 656
MS.gene94363.t1 MTR_3g081170 25.739 812 481 21 2 701 25 826 2.58e-74 257
MS.gene94363.t1 MTR_6g033955 33.718 347 229 1 4 350 10 355 1.54e-63 223
MS.gene94363.t1 MTR_7g024580 33.718 347 229 1 4 350 10 355 1.40e-62 221
MS.gene94363.t1 MTR_7g099680 33.718 347 229 1 4 350 10 355 1.84e-62 220
MS.gene94363.t1 MTR_4g063710 33.718 347 229 1 4 350 10 355 1.84e-62 220
MS.gene94363.t1 MTR_7g024390 33.141 347 231 1 4 350 10 355 8.95e-62 218
MS.gene94363.t1 MTR_4g063720 33.141 347 231 1 4 350 10 355 1.86e-61 218
MS.gene94363.t1 MTR_6g033760 34.294 347 227 1 4 350 10 355 5.49e-61 216
MS.gene94363.t1 MTR_4g130540 32.853 347 232 1 4 350 9 354 7.12e-61 216
MS.gene94363.t1 MTR_6g033820 33.913 345 227 1 4 348 10 353 1.12e-60 216
MS.gene94363.t1 MTR_6g033870 33.146 356 236 2 4 358 11 365 3.07e-60 215
MS.gene94363.t1 MTR_7g078190 34.670 349 226 1 4 350 10 358 9.04e-60 213
MS.gene94363.t1 MTR_6g033850 32.578 353 237 1 4 356 10 361 3.88e-59 212
MS.gene94363.t1 MTR_8g099945 32.857 350 229 3 2 350 37 381 8.21e-59 211
MS.gene94363.t1 MTR_8g099795 32.857 350 229 3 2 350 37 381 2.69e-58 209
MS.gene94363.t1 MTR_2g010020 34.262 359 220 4 3 356 57 404 3.85e-58 209
MS.gene94363.t1 MTR_2g010020 34.262 359 220 4 3 356 56 403 4.32e-58 209
MS.gene94363.t1 MTR_7g024030 32.665 349 232 2 4 350 10 357 9.60e-58 206
MS.gene94363.t1 MTR_7g025760 32.665 349 232 2 4 350 10 357 1.19e-57 206
MS.gene94363.t1 MTR_8g032650 32.571 350 231 3 4 350 10 357 2.35e-57 206
MS.gene94363.t1 MTR_2g437440 31.429 350 235 3 4 350 10 357 4.65e-57 204
MS.gene94363.t1 MTR_7g026030 32.378 349 233 2 4 350 10 357 9.24e-57 204
MS.gene94363.t1 MTR_7g025740 32.378 349 233 2 4 350 10 357 1.71e-56 204
MS.gene94363.t1 MTR_2g038260 32.378 349 233 2 4 350 10 357 2.19e-56 203
MS.gene94363.t1 MTR_7g025790 32.092 349 234 2 4 350 10 357 4.25e-56 202
MS.gene94363.t1 MTR_2g040370 32.565 347 231 1 4 350 1030 1373 6.15e-56 207
MS.gene94363.t1 MTR_2g040370 31.034 348 236 2 4 350 1414 1758 1.15e-50 191
MS.gene94363.t1 MTR_2g040370 32.565 347 231 1 4 350 1030 1373 7.57e-56 207
MS.gene94363.t1 MTR_2g040370 31.034 348 236 2 4 350 1414 1758 1.40e-50 191
MS.gene94363.t1 MTR_7g025720 33.429 350 228 3 4 350 10 357 8.88e-56 201
MS.gene94363.t1 MTR_7g026170 32.471 348 232 2 4 349 10 356 1.46e-55 201
MS.gene94363.t1 MTR_7g021440 32.571 350 231 4 4 350 10 357 2.61e-55 200
MS.gene94363.t1 MTR_2g032550 31.909 351 232 3 4 350 11 358 5.29e-55 199
MS.gene94363.t1 MTR_4g092920 32.591 359 227 4 3 356 53 401 6.51e-55 200
MS.gene94363.t1 MTR_2g032160 30.659 349 239 2 4 350 10 357 8.89e-55 195
MS.gene94363.t1 MTR_7g451380 32.286 350 232 3 4 350 10 357 1.33e-54 198
MS.gene94363.t1 MTR_7g029415 31.232 349 237 2 4 350 17 364 2.44e-54 197
MS.gene94363.t1 MTR_7g026090 32.665 349 232 2 4 350 10 357 2.97e-54 197
MS.gene94363.t1 MTR_2g040260 32.277 347 232 1 4 350 1039 1382 3.81e-54 202
MS.gene94363.t1 MTR_4g079590 31.429 350 235 3 4 350 10 357 4.85e-54 196
MS.gene94363.t1 MTR_7g025770 30.966 352 238 3 2 350 8 357 5.91e-54 196
MS.gene94363.t1 MTR_5g066800 31.283 374 227 6 4 356 10 374 6.09e-54 196
MS.gene94363.t1 MTR_7g025820 31.805 349 235 2 4 350 10 357 7.22e-54 196
MS.gene94363.t1 MTR_7g026130 31.429 350 235 3 4 350 10 357 2.04e-53 196
MS.gene94363.t1 MTR_2g040160 31.412 347 235 1 4 350 1110 1453 5.67e-53 198
MS.gene94363.t1 MTR_2g022050 31.714 350 234 3 4 350 10 357 7.37e-53 193
MS.gene94363.t1 MTR_7g025620 30.682 352 239 3 2 350 8 357 1.60e-52 192
MS.gene94363.t1 MTR_7g026110 32.203 354 226 6 4 350 10 356 4.04e-52 191
MS.gene94363.t1 MTR_2g017730 30.659 349 239 2 4 350 9 356 4.40e-52 191
MS.gene94363.t1 MTR_7g078210 31.714 350 234 3 4 350 10 357 1.40e-50 187
MS.gene94363.t1 MTR_7g035155 29.211 380 252 5 4 380 10 375 3.77e-50 184
MS.gene94363.t1 MTR_7g025630 31.232 349 223 3 4 350 10 343 9.71e-50 184
MS.gene94363.t1 MTR_2g032580 29.513 349 243 2 4 350 10 357 4.30e-49 182
MS.gene94363.t1 MTR_2g038270 29.805 359 239 4 3 350 9 365 2.03e-48 181
MS.gene94363.t1 MTR_7g011590 29.799 349 230 2 4 350 10 345 3.88e-48 179
MS.gene94363.t1 MTR_7g451360 30.659 349 209 3 4 350 10 327 1.53e-47 177
MS.gene94363.t1 MTR_1g077230 33.455 275 178 3 4 275 10 282 2.16e-47 169
MS.gene94363.t1 MTR_2g040350 31.073 354 233 3 3 350 1038 1386 2.65e-47 181
MS.gene94363.t1 MTR_2g040350 31.073 354 233 3 3 350 820 1168 5.31e-47 180
MS.gene94363.t1 MTR_2g040220 29.799 349 242 2 4 350 1019 1366 3.00e-46 178
MS.gene94363.t1 MTR_7g025260 32.476 311 207 2 42 350 20 329 7.53e-46 173
MS.gene94363.t1 MTR_4g027145 29.363 361 240 3 4 350 10 369 5.36e-45 171
MS.gene94363.t1 MTR_7g026140 28.940 349 229 3 4 350 10 341 7.14e-45 170
MS.gene94363.t1 MTR_7g007000 26.566 399 247 6 4 380 10 384 2.46e-43 165
MS.gene94363.t1 MTR_2g005690 31.728 353 227 5 3 350 71 414 8.44e-43 165
MS.gene94363.t1 MTR_8g103930 28.333 360 228 6 4 350 12 354 4.79e-42 162
MS.gene94363.t1 MTR_7g074460 28.653 349 228 4 4 350 10 339 1.71e-40 157
MS.gene94363.t1 MTR_6g033800 32.601 273 183 1 84 356 1 272 2.38e-40 157
MS.gene94363.t1 MTR_1g017130 26.648 349 215 3 4 350 10 319 1.27e-39 154
MS.gene94363.t1 MTR_7g026080 31.780 236 156 3 4 236 10 243 7.08e-36 136
MS.gene94363.t1 MTR_4g092920 31.408 277 176 3 84 356 1 267 2.32e-35 141
MS.gene94363.t1 MTR_4g063720 31.925 213 144 1 4 216 10 221 3.14e-32 132
MS.gene94363.t1 MTR_1g041565 25.926 351 204 6 2 350 4 300 1.21e-30 127
MS.gene94363.t1 MTR_4g088515 28.571 252 155 4 4 251 277 507 2.38e-28 121
MS.gene94363.t1 MTR_1207s0010 36.527 167 104 2 112 278 13 177 2.48e-28 112
MS.gene94363.t1 MTR_2g031670 27.434 226 159 2 15 238 45 267 1.64e-27 114
MS.gene94363.t1 MTR_6g034005 28.413 271 191 2 74 344 2 269 2.06e-27 118
MS.gene94363.t1 MTR_6g033810 27.347 245 129 1 112 356 42 237 3.30e-23 100
MS.gene94363.t1 MTR_7g026180 34.677 124 81 0 68 191 21 144 2.89e-19 90.1
MS.gene94363.t1 MTR_5g006180 26.393 341 224 12 4 326 30 361 9.64e-19 90.9
MS.gene94363.t1 MTR_5g097190 26.286 175 116 3 4 176 159 322 2.24e-16 82.0
MS.gene94363.t1 MTR_6g478100 24.658 219 150 3 30 248 10 213 3.52e-16 80.5
MS.gene94363.t1 MTR_4g107920 26.280 293 192 8 113 392 125 406 1.26e-13 74.7
MS.gene94363.t1 MTR_5g090110 24.167 360 236 9 4 350 29 364 1.70e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94363.t1 AT1G11660 55.376 744 273 4 1 699 1 730 0.0 807
MS.gene94363.t1 AT1G11660 55.376 744 273 4 1 699 1 730 0.0 807
MS.gene94363.t1 AT1G11660 55.376 744 273 4 1 699 1 730 0.0 807
MS.gene94363.t1 AT1G11660 53.607 707 269 4 38 699 1 693 0.0 738
MS.gene94363.t1 AT1G79930 47.066 784 326 9 1 700 1 779 0.0 690
MS.gene94363.t1 AT1G79930 47.126 783 325 9 1 699 1 778 0.0 689
MS.gene94363.t1 AT1G79920 48.154 650 255 8 1 573 1 645 0.0 583
MS.gene94363.t1 AT1G79920 47.994 648 259 7 1 573 1 645 0.0 578
MS.gene94363.t1 AT1G79920 47.994 648 259 7 1 573 1 645 0.0 578
MS.gene94363.t1 AT1G79920 47.994 648 259 7 1 573 1 645 0.0 578
MS.gene94363.t1 AT4G16660 27.318 809 467 23 2 701 25 821 2.94e-77 265
MS.gene94363.t1 AT4G16660 27.318 809 467 23 2 701 49 845 4.28e-77 265
MS.gene94363.t1 AT5G02500 33.141 347 231 1 4 350 10 355 9.44e-64 221
MS.gene94363.t1 AT3G09440 34.006 347 228 1 4 350 10 355 5.59e-63 222
MS.gene94363.t1 AT3G09440 34.006 347 228 1 4 350 10 355 5.59e-63 222
MS.gene94363.t1 AT3G09440 34.006 347 228 1 4 350 10 355 5.59e-63 222
MS.gene94363.t1 AT3G09440 34.006 347 228 1 4 350 10 355 5.59e-63 222
MS.gene94363.t1 AT5G02500 33.141 347 231 1 4 350 10 355 1.01e-62 221
MS.gene94363.t1 AT5G42020 34.000 350 225 3 2 350 36 380 1.26e-61 218
MS.gene94363.t1 AT5G42020 34.000 350 225 3 2 350 36 380 1.32e-61 217
MS.gene94363.t1 AT5G42020 34.000 350 225 3 2 350 41 385 2.21e-61 218
MS.gene94363.t1 AT3G12580 32.565 347 233 1 4 350 10 355 2.55e-61 217
MS.gene94363.t1 AT5G28540 34.000 350 225 3 2 350 36 380 2.74e-61 218
MS.gene94363.t1 AT1G16030 32.277 347 234 1 4 350 9 354 8.41e-61 216
MS.gene94363.t1 AT1G56410 32.565 347 233 1 4 350 10 355 2.46e-60 214
MS.gene94363.t1 AT1G09080 34.670 349 223 2 2 350 41 384 8.57e-60 213
MS.gene94363.t1 AT1G09080 34.670 349 223 2 2 350 51 394 1.58e-59 213
MS.gene94363.t1 AT5G02490 31.988 347 235 1 4 350 10 355 8.18e-58 207
MS.gene94363.t1 AT5G09590 33.705 359 223 5 3 356 59 407 1.33e-55 202
MS.gene94363.t1 AT4G37910 33.426 359 224 4 3 356 54 402 1.33e-54 199
MS.gene94363.t1 AT4G37910 33.426 359 224 4 3 356 54 402 1.33e-54 199
MS.gene94363.t1 AT5G49910 32.295 353 225 5 3 350 80 423 1.17e-43 168
MS.gene94363.t1 AT4G24280 31.728 353 227 5 3 350 80 423 1.08e-41 162
MS.gene94363.t1 AT2G32120 25.824 364 230 12 4 350 31 371 6.38e-18 88.2
MS.gene94363.t1 AT2G32120 25.824 364 230 12 4 350 31 371 6.38e-18 88.2

Find 139 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTATAGGCAGGAGATTTC+TGG 0.177339 3.2:+43771715 MS.gene94363:CDS
AATATTGGGTCGACATTCTT+AGG 0.196299 3.2:-43777332 None:intergenic
CCCATCTCGGATTGTGTTAT+TGG 0.218841 3.2:+43771914 MS.gene94363:CDS
GAATCTTGCATCTGGATTAT+TGG 0.227874 3.2:+43772420 MS.gene94363:CDS
ATATGACTTGACCATAATAT+TGG 0.250150 3.2:-43777347 None:intergenic
CTTGGAATGGGATGGCCTTT+TGG 0.265566 3.2:-43773221 None:intergenic
TGCATTGCAGCGTTTGAGTT+TGG 0.267137 3.2:+43772133 MS.gene94363:CDS
TGGTGGAGAATCACGCTTAT+TGG 0.286757 3.2:-43775071 None:intergenic
TTTCATTTGAAATACTTAGA+TGG 0.296582 3.2:+43771809 MS.gene94363:CDS
AGCTAGTTGGTTCAGGTTCT+AGG 0.310491 3.2:+43772515 MS.gene94363:CDS
CTCTGTCCTGTTGAGCTAAC+TGG 0.311382 3.2:-43775693 None:intergenic
TCGCAAGTGAAGAGATTTAT+AGG 0.314040 3.2:+43771701 MS.gene94363:CDS
CTATCTGAGGTCTCGGACTT+AGG 0.323825 3.2:-43775013 None:intergenic
AAATCTCTTCACTTGCGATA+TGG 0.325541 3.2:-43771696 None:intergenic
GCATTGCAGCGTTTGAGTTT+GGG 0.325875 3.2:+43772134 MS.gene94363:CDS
TCTGTGGAGCTAGTTGGTTC+AGG 0.330516 3.2:+43772508 MS.gene94363:CDS
GATTGAAGTCCATATGAAAA+AGG 0.332999 3.2:-43773155 None:intergenic
GCCAACTGATTTGTCCCATT+TGG 0.343188 3.2:+43773265 MS.gene94363:CDS
AAAACTAGAAGATCTGAAAA+AGG 0.347739 3.2:+43776959 MS.gene94363:CDS
ACCCCTGCTGTCGTCTGCTT+TGG 0.352853 3.2:+43771611 MS.gene94363:CDS
AGCGCCATTGGCAACAGAAT+TGG 0.380177 3.2:-43775038 None:intergenic
GAGATTTCTGGATCCTGATA+TGG 0.383130 3.2:+43771727 MS.gene94363:CDS
AGCATAGACATTATTTGAAC+TGG 0.388293 3.2:-43771848 None:intergenic
TATGACTTGACCATAATATT+GGG 0.389242 3.2:-43777346 None:intergenic
GCGCAATAGAGGAGCTAAAC+AGG 0.389650 3.2:+43777375 MS.gene94363:CDS
GATGGATGAGAAAGATGTTA+AGG 0.391889 3.2:+43772372 MS.gene94363:CDS
AGAACTCCAGTTAGCTCAAC+AGG 0.394053 3.2:+43775687 MS.gene94363:CDS
ACGCAGCCTAATGCAAGCCT+TGG 0.398015 3.2:-43772281 None:intergenic
GAATTTGAGAATCTTGCATC+TGG 0.403441 3.2:+43772412 MS.gene94363:CDS
AGAATGTCGACCCAATATTA+TGG 0.406352 3.2:+43777336 MS.gene94363:CDS
TCGCCAAAGCAGACGACAGC+AGG 0.408209 3.2:-43771614 None:intergenic
TCAATAAATGCAACATAACT+TGG 0.417342 3.2:-43772085 None:intergenic
TCGATATTTAGCGGTGCCTC+TGG 0.422641 3.2:-43772343 None:intergenic
TCTTTGTACCGAATCTCAAT+TGG 0.423825 3.2:-43777062 None:intergenic
CTTGCGATATGGTTGACTTT+GGG 0.426132 3.2:-43771685 None:intergenic
TTGCTGGGTTGAAGCCTTTG+AGG 0.426321 3.2:+43771993 MS.gene94363:CDS
GTTGAATGATGAATCGAAAC+GGG 0.426655 3.2:+43771586 MS.gene94363:CDS
GACTGAGGATTGGCTTTATG+AGG 0.428957 3.2:+43776902 MS.gene94363:CDS
CTTGACGCGGCAATAATTGC+TGG 0.430407 3.2:+43771977 MS.gene94363:CDS
AAATTCTCATTCACTGCAAT+AGG 0.439271 3.2:-43775619 None:intergenic
TTCATTTGAAATACTTAGAT+GGG 0.442131 3.2:+43771810 MS.gene94363:CDS
TTGCGTAGAAAGCTTCCAAA+TGG 0.446853 3.2:-43773280 None:intergenic
TGCAAGTCGGTGAAGTATGA+TGG 0.449561 3.2:-43771941 None:intergenic
ACTGCAACTGCTCTTAGTTA+TGG 0.451796 3.2:+43772031 MS.gene94363:CDS
GCAGTGAATGAGAATTTCTA+TGG 0.456214 3.2:+43775625 MS.gene94363:CDS
GATGGGAAGACCACAGTACT+TGG 0.456596 3.2:-43773239 None:intergenic
ATTTCTTCTGTGGAGCTAGT+TGG 0.456860 3.2:+43772502 MS.gene94363:CDS
CGTTTGAGTTTGGGCAAATG+AGG 0.457526 3.2:+43772143 MS.gene94363:CDS
TCATATTAAGAGCGCAATAG+AGG 0.458464 3.2:+43777364 MS.gene94363:CDS
GACAAATCAGTTGGCTTGGA+TGG 0.460531 3.2:-43773257 None:intergenic
ACTTGCGATATGGTTGACTT+TGG 0.461121 3.2:-43771686 None:intergenic
TGAGTTGAAATGAGCGTGGT+AGG 0.472061 3.2:+43771500 None:intergenic
TCAATTAATGCTTCGTTGCA+AGG 0.472169 3.2:-43772457 None:intergenic
AACAGCTCTTCAACACATAT+CGG 0.473623 3.2:+43776829 MS.gene94363:intron
AAGAGAGGGATGTCATATCT+AGG 0.475264 3.2:+43776868 MS.gene94363:CDS
AACGAAGCATTAATTGAAGC+AGG 0.477356 3.2:+43772463 MS.gene94363:CDS
GCATGGATCTCAAGGTAGTA+AGG 0.480080 3.2:+43774790 MS.gene94363:CDS
GGTACTATCTTCAGCGCCAT+TGG 0.480640 3.2:-43775050 None:intergenic
ATGGATGAGAAAGATGTTAA+GGG 0.484542 3.2:+43772373 MS.gene94363:CDS
ATGGGACAAATCAGTTGGCT+TGG 0.486215 3.2:-43773261 None:intergenic
TTTGGGAAAAGTACACCATC+TGG 0.486296 3.2:-43773203 None:intergenic
GCTAAATATCGAGTGTCTGA+TGG 0.498645 3.2:+43772354 MS.gene94363:CDS
TTTCAGATCGGTCCTATGCA+TGG 0.498893 3.2:+43774773 MS.gene94363:intron
ATTGGTACTATCTGAGGTCT+CGG 0.498902 3.2:-43775020 None:intergenic
TGAAACAAAACGCCACCATC+CGG 0.499778 3.2:-43771791 None:intergenic
TATGTTGCATTTATTGACAT+TGG 0.501872 3.2:+43772091 MS.gene94363:CDS
TGTTGAATGATGAATCGAAA+CGG 0.503473 3.2:+43771585 MS.gene94363:CDS
CTAATGCCAAGGCTTGCATT+AGG 0.505620 3.2:+43772275 MS.gene94363:CDS
TAGATATGACATCCCTCTCT+TGG 0.505654 3.2:-43776866 None:intergenic
TCTGGATCCTGATATGGAAA+AGG 0.508996 3.2:+43771733 MS.gene94363:CDS
AAGTGAAGAGATTTATAGGC+AGG 0.509278 3.2:+43771705 MS.gene94363:CDS
TCTTGAAACTTCTCAAGGGC+CGG 0.516494 3.2:+43771772 MS.gene94363:CDS
TGGTGGATCCAATTGAGATT+CGG 0.522302 3.2:+43777054 MS.gene94363:CDS
AGATTTGGAGGCACCCATCT+CGG 0.528289 3.2:+43771901 MS.gene94363:CDS
GCTGTGGCTTCAGTTGATCA+AGG 0.528497 3.2:+43774943 MS.gene94363:intron
TGCGTAGAAAGCTTCCAAAT+GGG 0.529319 3.2:-43773279 None:intergenic
ACCAATAACACAATCCGAGA+TGG 0.536467 3.2:-43771915 None:intergenic
CTCCCTCTTGAAACTTCTCA+AGG 0.537397 3.2:+43771767 MS.gene94363:CDS
TTGCTGTGGCAAAGCATCGC+GGG 0.538277 3.2:+43771552 MS.gene94363:CDS
GAGTTGAAATGAGCGTGGTA+GGG 0.538506 3.2:+43771501 None:intergenic
ATGACAGTACTTACATAACT+TGG 0.540514 3.2:-43775091 None:intergenic
TGTCTATGAGACGAGAAGTA+AGG 0.544538 3.2:+43775759 MS.gene94363:CDS
TCCAAATGGGACAAATCAGT+TGG 0.545647 3.2:-43773266 None:intergenic
ACTTCACCGACTTGCAGAGA+TGG 0.547166 3.2:+43771948 MS.gene94363:CDS
TTGACGCGGCAATAATTGCT+GGG 0.549851 3.2:+43771978 MS.gene94363:CDS
ACAAATCAGTTGGCTTGGAT+GGG 0.550025 3.2:-43773256 None:intergenic
CAGTCGTGTATCAGCCTCAA+AGG 0.550345 3.2:-43772007 None:intergenic
CTTCACCGACTTGCAGAGAT+GGG 0.553773 3.2:+43771949 MS.gene94363:CDS
AAGACCACAGTACTTGGAAT+GGG 0.553954 3.2:-43773233 None:intergenic
CGAATTTCTGATAGACCAGA+TGG 0.560566 3.2:+43773188 MS.gene94363:CDS
GTTTGCAAGAGACTGAGGAT+TGG 0.563246 3.2:+43776892 MS.gene94363:CDS
TGCAGAGAAGATTTCTTCTG+TGG 0.563467 3.2:+43772492 MS.gene94363:CDS
GAAGACCACAGTACTTGGAA+TGG 0.568981 3.2:-43773234 None:intergenic
CCAATAACACAATCCGAGAT+GGG 0.574942 3.2:-43771914 None:intergenic
GCAAGTCGGTGAAGTATGAT+GGG 0.575797 3.2:-43771940 None:intergenic
GAAAAGATAAGGCGAACAGA+AGG 0.576632 3.2:+43775593 MS.gene94363:CDS
CGCCAAAGCAGACGACAGCA+GGG 0.576685 3.2:-43771613 None:intergenic
AGATTGTCTAAGAAAAGATA+AGG 0.579423 3.2:+43775582 MS.gene94363:CDS
ATGTTAAGGGCTTTATAACA+AGG 0.580637 3.2:+43772386 MS.gene94363:CDS
TTAGCAATGAAGCAGAGCAT+TGG 0.581229 3.2:+43777276 MS.gene94363:CDS
AGAGCATTGGCTAACAGAGA+AGG 0.581697 3.2:+43777289 MS.gene94363:CDS
GGTCCTATGCATGGATCTCA+AGG 0.585543 3.2:+43774782 MS.gene94363:CDS
TCTGCTTTGGCGAGAAGCAG+CGG 0.586019 3.2:+43771624 MS.gene94363:CDS
ATCAGACACTCGATATTTAG+CGG 0.586237 3.2:-43772352 None:intergenic
ACTTCTCGTCTCATAGACAT+AGG 0.590574 3.2:-43775755 None:intergenic
TGATGTGTATTCTAATGCCA+AGG 0.591618 3.2:+43772264 MS.gene94363:CDS
AACAGAATTGGTACTATCTG+AGG 0.592528 3.2:-43775026 None:intergenic
ACAGTACTTACATAACTTGG+TGG 0.592894 3.2:-43775088 None:intergenic
GAAACTTCTCAAGGGCCGGA+TGG 0.593136 3.2:+43771776 MS.gene94363:CDS
ACTTCTCAAGGGCCGGATGG+TGG 0.593340 3.2:+43771779 MS.gene94363:CDS
AGCTCAACAGGACAGAGCTG+TGG 0.600190 3.2:+43775699 MS.gene94363:CDS
CTCATAGACATAGGACTCCA+AGG 0.602157 3.2:-43775746 None:intergenic
GCTTTGCTAGTGACCAAGAG+AGG 0.604732 3.2:+43776853 MS.gene94363:CDS
AATGAACATGAACTACCACC+TGG 0.605194 3.2:+43773302 MS.gene94363:CDS
CAAAGAAAAGAAGAACACCT+TGG 0.609634 3.2:+43775729 MS.gene94363:CDS
AGTACCAATTCTGTTGCCAA+TGG 0.610914 3.2:+43775034 MS.gene94363:CDS
TTTCTATGGTGGAATGACAA+TGG 0.611799 3.2:+43775639 MS.gene94363:CDS
TAGGAGTTTGCAAGAGACTG+AGG 0.618731 3.2:+43776887 MS.gene94363:CDS
TGTTAAGGGCTTTATAACAA+GGG 0.620789 3.2:+43772387 MS.gene94363:CDS
GAGGATTGGCTTTATGAGGA+CGG 0.621172 3.2:+43776906 MS.gene94363:CDS
GGCCCTTGAGAAGTTTCAAG+AGG 0.625597 3.2:-43771770 None:intergenic
TCCCTCTTGAAACTTCTCAA+GGG 0.627702 3.2:+43771768 MS.gene94363:CDS
CCACAGTACTTGGAATGGGA+TGG 0.630102 3.2:-43773229 None:intergenic
CTACCTTGAGATCCATGCAT+AGG 0.630694 3.2:-43774785 None:intergenic
AGCGTGGTAGGGTTTGACAT+TGG 0.635643 3.2:+43771512 MS.gene94363:CDS
CTTTGCTAGTGACCAAGAGA+GGG 0.635803 3.2:+43776854 MS.gene94363:CDS
GCCCTTGAGAAGTTTCAAGA+GGG 0.636685 3.2:-43771769 None:intergenic
CGAGTTCAACTAAATCTGCA+TGG 0.636814 3.2:+43774827 MS.gene94363:CDS
CATTGGTCAATGTGACACTC+AGG 0.643408 3.2:+43772108 MS.gene94363:CDS
CTAAACTGAGCATACCGTGA+AGG 0.666297 3.2:-43773345 None:intergenic
TGAGAACTGTGTTATTGCTG+TGG 0.670838 3.2:+43771538 MS.gene94363:CDS
AAGGTGAGTTGAAATGAGCG+TGG 0.670974 3.2:+43771496 None:intergenic
GTGAATGAGAATTTCTATGG+TGG 0.675812 3.2:+43775628 MS.gene94363:CDS
TCAGTTGATCAAGGATCACA+CGG 0.676692 3.2:+43774952 MS.gene94363:intron
ATATGCCCATCTCTGCAAGT+CGG 0.677521 3.2:-43771954 None:intergenic
GCCAAAGCAGACGACAGCAG+GGG 0.693366 3.2:-43771612 None:intergenic
CCATCCCATTCCAAGTACTG+TGG 0.701012 3.2:+43773229 MS.gene94363:CDS
ATTGCTGTGGCAAAGCATCG+CGG 0.704864 3.2:+43771551 MS.gene94363:CDS
GAGATGGGCATATCTTGACG+CGG 0.752043 3.2:+43771964 MS.gene94363:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr3.2:43774345-43774364 None:intergenic 0.0%
!! ACAAATATAAACTAATATTA+AGG - chr3.2:43777425-43777444 None:intergenic 10.0%
!!! GATTATCTTATATTTTTTAT+TGG + chr3.2:43776238-43776257 MS.gene94363:intron 10.0%
!!! TTATTATTTTTTTGAATTTC+AGG + chr3.2:43773753-43773772 MS.gene94363:intron 10.0%
!! AAAACTTATATAGATATAGA+CGG + chr3.2:43773818-43773837 MS.gene94363:intron 15.0%
!! ACACTAATATAAGAAAATAA+AGG - chr3.2:43773565-43773584 None:intergenic 15.0%
!! TAAAAAGTAAAATAGTTGTT+CGG - chr3.2:43776013-43776032 None:intergenic 15.0%
!! TCATAATTTATACCAAAAAA+TGG - chr3.2:43774900-43774919 None:intergenic 15.0%
!!! AAAAAAAAAAGGAAAAGTAT+TGG - chr3.2:43774335-43774354 None:intergenic 15.0%
!!! TTCTAAGAAATATTAAAAAC+AGG + chr3.2:43774245-43774264 MS.gene94363:intron 15.0%
!! AACATAAATCAGACAATATT+TGG - chr3.2:43774431-43774450 None:intergenic 20.0%
!! AGAATATATTATGACATAAG+TGG - chr3.2:43774168-43774187 None:intergenic 20.0%
!! ATACTGAAAATAAACCTTTA+AGG - chr3.2:43772984-43773003 None:intergenic 20.0%
!! ATATATTCTATCATTAGAAC+AGG + chr3.2:43777477-43777496 MS.gene94363:intron 20.0%
!! ATGCTTACAAATATAATGTA+TGG - chr3.2:43774406-43774425 None:intergenic 20.0%
!! ATTATAAATAACAGCTCAAA+AGG - chr3.2:43773650-43773669 None:intergenic 20.0%
!! CATCACAGTTATATATTATA+AGG - chr3.2:43774096-43774115 None:intergenic 20.0%
!! CATGAAATAAGATAAAAGTT+TGG - chr3.2:43776751-43776770 None:intergenic 20.0%
!! GGATTAAAATAAAAACTTCA+TGG + chr3.2:43776592-43776611 MS.gene94363:intron 20.0%
!! TAATATTAAGGAAAACAGAA+AGG - chr3.2:43777413-43777432 None:intergenic 20.0%
!! TATAACTTTATCAAGTAAAG+TGG + chr3.2:43776558-43776577 MS.gene94363:intron 20.0%
!! TTATAAATAACAGCTCAAAA+GGG - chr3.2:43773649-43773668 None:intergenic 20.0%
!!! AGAAATTGCATTGATTTAAA+CGG - chr3.2:43773107-43773126 None:intergenic 20.0%
!!! AGTTAGAAATTTAACTTGAA+TGG + chr3.2:43774463-43774482 MS.gene94363:intron 20.0%
!!! AGTTTATATTTGTCATTTTC+TGG + chr3.2:43777432-43777451 MS.gene94363:intron 20.0%
!!! CTTAAGATAAGCTTTTAATT+GGG + chr3.2:43777225-43777244 MS.gene94363:intron 20.0%
!!! CTTTCTTTTTCTTTTTCTTT+TGG + chr3.2:43775146-43775165 MS.gene94363:intron 20.0%
!!! GGTTTTATTTTTCCATTTTT+TGG + chr3.2:43774885-43774904 MS.gene94363:intron 20.0%
!!! TCTTAAGATAAGCTTTTAAT+TGG + chr3.2:43777224-43777243 MS.gene94363:intron 20.0%
!!! TGTTTTATGAATTGTTGTTA+AGG - chr3.2:43773798-43773817 None:intergenic 20.0%
!!! TTCATTTGAAATACTTAGAT+GGG + chr3.2:43771810-43771829 MS.gene94363:CDS 20.0%
!!! TTGTCTGATTTATGTTTTAT+TGG + chr3.2:43774435-43774454 MS.gene94363:intron 20.0%
!!! TTTCATTTGAAATACTTAGA+TGG + chr3.2:43771809-43771828 MS.gene94363:CDS 20.0%
!!! TTTCTTAGAAACTTTGTTTT+AGG - chr3.2:43774235-43774254 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTGTATCC+AGG + chr3.2:43774361-43774380 MS.gene94363:intron 20.0%
! AAAACTAGAAGATCTGAAAA+AGG + chr3.2:43776959-43776978 MS.gene94363:CDS 25.0%
! ACAAACCCATAAATGTAATA+TGG + chr3.2:43775394-43775413 MS.gene94363:intron 25.0%
! ACTTGATAAAGTTATAGCAT+GGG - chr3.2:43776554-43776573 None:intergenic 25.0%
! AGATTGTCTAAGAAAAGATA+AGG + chr3.2:43775582-43775601 MS.gene94363:CDS 25.0%
! AGCATCACAATAATATATAG+TGG - chr3.2:43777202-43777221 None:intergenic 25.0%
! ATATGACTTGACCATAATAT+TGG - chr3.2:43777350-43777369 None:intergenic 25.0%
! CTATACCTAATTCAGAAATA+GGG - chr3.2:43774515-43774534 None:intergenic 25.0%
! GATTGCCATATTACATTTAT+GGG - chr3.2:43775402-43775421 None:intergenic 25.0%
! GGGTACAATATTACAAATAA+AGG - chr3.2:43773086-43773105 None:intergenic 25.0%
! TACTTGATAAAGTTATAGCA+TGG - chr3.2:43776555-43776574 None:intergenic 25.0%
! TATGAAATATTATCTGCACA+GGG + chr3.2:43776708-43776727 MS.gene94363:intron 25.0%
! TATGACTTGACCATAATATT+GGG - chr3.2:43777349-43777368 None:intergenic 25.0%
! TATGTTGCATTTATTGACAT+TGG + chr3.2:43772091-43772110 MS.gene94363:CDS 25.0%
! TCAATAAATGCAACATAACT+TGG - chr3.2:43772088-43772107 None:intergenic 25.0%
! TCTATACCTAATTCAGAAAT+AGG - chr3.2:43774516-43774535 None:intergenic 25.0%
! TCTTATCCTATATATTGCAT+AGG + chr3.2:43775367-43775386 MS.gene94363:intron 25.0%
! TGATTGCCATATTACATTTA+TGG - chr3.2:43775403-43775422 None:intergenic 25.0%
!! AAAACAAATTTTCAGAGTGA+TGG + chr3.2:43772061-43772080 MS.gene94363:CDS 25.0%
!! CTTTTAATATGAGAATCCAA+AGG - chr3.2:43776501-43776520 None:intergenic 25.0%
!! TAAAAACAGGTTACTCTTTT+GGG + chr3.2:43774258-43774277 MS.gene94363:intron 25.0%
!! TCATTTTGCTGAAAAATTCA+AGG + chr3.2:43772228-43772247 MS.gene94363:CDS 25.0%
!! TTAAAAACAGGTTACTCTTT+TGG + chr3.2:43774257-43774276 MS.gene94363:intron 25.0%
!! TTGCTAAAAGGAAGTATATA+TGG + chr3.2:43774657-43774676 MS.gene94363:intron 25.0%
!!! AAATTTAACTTGAATGGATC+TGG + chr3.2:43774469-43774488 MS.gene94363:intron 25.0%
!!! AATTTAACTTGAATGGATCT+GGG + chr3.2:43774470-43774489 MS.gene94363:intron 25.0%
!!! ACTTTTTTGCTGATGTAAAA+TGG + chr3.2:43773027-43773046 MS.gene94363:intron 25.0%
!!! GAAATTGCATTGATTTAAAC+GGG - chr3.2:43773106-43773125 None:intergenic 25.0%
!!! GATATTAGTCCTTTTTCATA+TGG + chr3.2:43773146-43773165 MS.gene94363:CDS 25.0%
!!! GTGTTTTTGTTTTTAGTACT+AGG + chr3.2:43773482-43773501 MS.gene94363:intron 25.0%
!!! TCATTCAAATTTTGATGCAA+TGG + chr3.2:43774982-43775001 MS.gene94363:CDS 25.0%
!!! TTTGTCATTTTCTGGTTATA+TGG + chr3.2:43777440-43777459 MS.gene94363:intron 25.0%
AAATTCTCATTCACTGCAAT+AGG - chr3.2:43775622-43775641 None:intergenic 30.0%
AACATGTTTCAAGAAGTTCT+CGG + chr3.2:43774202-43774221 MS.gene94363:intron 30.0%
AAGGCATGAAAACAATTCTT+CGG - chr3.2:43776626-43776645 None:intergenic 30.0%
AAGTAAAATAGTTGTTCGGT+TGG - chr3.2:43776009-43776028 None:intergenic 30.0%
AATCCAAAGGATATCATTAG+GGG - chr3.2:43776488-43776507 None:intergenic 30.0%
AGAATCCAAAGGATATCATT+AGG - chr3.2:43776490-43776509 None:intergenic 30.0%
AGCATAGACATTATTTGAAC+TGG - chr3.2:43771851-43771870 None:intergenic 30.0%
AGTATCCTTAAACAAAGACT+TGG + chr3.2:43773979-43773998 MS.gene94363:intron 30.0%
ATGAAAAAGGACTAATATCC+TGG - chr3.2:43773145-43773164 None:intergenic 30.0%
ATGACAGTACTTACATAACT+TGG - chr3.2:43775094-43775113 None:intergenic 30.0%
ATGGATGAGAAAGATGTTAA+GGG + chr3.2:43772373-43772392 MS.gene94363:CDS 30.0%
CATGAAATAACCTATGAGTA+TGG + chr3.2:43774289-43774308 MS.gene94363:intron 30.0%
CTAAAAAGATAAGTTCTGCT+AGG + chr3.2:43773896-43773915 MS.gene94363:intron 30.0%
CTATGAAATATTATCTGCAC+AGG + chr3.2:43776707-43776726 MS.gene94363:intron 30.0%
GAAACATGTTGAGTTACATA+GGG - chr3.2:43774192-43774211 None:intergenic 30.0%
GAATCCAAAGGATATCATTA+GGG - chr3.2:43776489-43776508 None:intergenic 30.0%
GACTATGACAGAAAAAGATT+TGG + chr3.2:43771886-43771905 MS.gene94363:CDS 30.0%
GATTGAAGTCCATATGAAAA+AGG - chr3.2:43773158-43773177 None:intergenic 30.0%
GTCTATCCTATGCAATATAT+AGG - chr3.2:43775376-43775395 None:intergenic 30.0%
TATGACAGAAAAAGATTTGG+AGG + chr3.2:43771889-43771908 MS.gene94363:CDS 30.0%
TCCAAAAATTAGTTCCTTCA+CGG + chr3.2:43773331-43773350 MS.gene94363:CDS 30.0%
TCTGGTTATATGGTTTGATT+TGG + chr3.2:43777450-43777469 MS.gene94363:intron 30.0%
TGAAACATGTTGAGTTACAT+AGG - chr3.2:43774193-43774212 None:intergenic 30.0%
TGGTATATGCTAGAACATTA+TGG - chr3.2:43776177-43776196 None:intergenic 30.0%
TGTTGAATGATGAATCGAAA+CGG + chr3.2:43771585-43771604 MS.gene94363:CDS 30.0%
! AAACCTTTAAGGATAAACCT+AGG - chr3.2:43772973-43772992 None:intergenic 30.0%
! ATAGCATGGGTTCTTTAAAA+AGG - chr3.2:43776541-43776560 None:intergenic 30.0%
! ATGTTAAGGGCTTTATAACA+AGG + chr3.2:43772386-43772405 MS.gene94363:CDS 30.0%
! CGAGTTTTGCATTTACTAAA+GGG - chr3.2:43776666-43776685 None:intergenic 30.0%
! GAATTGTTGTTAAGGTATCT+AGG - chr3.2:43773790-43773809 None:intergenic 30.0%
! TACTACACTGTTTTATCCTT+TGG + chr3.2:43776081-43776100 MS.gene94363:intron 30.0%
! TATGCTCAGTTTAGAACATT+TGG + chr3.2:43773354-43773373 MS.gene94363:intron 30.0%
! TCGAGTTTTGCATTTACTAA+AGG - chr3.2:43776667-43776686 None:intergenic 30.0%
! TGTTAAGGGCTTTATAACAA+GGG + chr3.2:43772387-43772406 MS.gene94363:CDS 30.0%
!! ATTTAACTTGAATGGATCTG+GGG + chr3.2:43774471-43774490 MS.gene94363:intron 30.0%
!! TAACTGGAGTTCTTTTTCAT+GGG - chr3.2:43775680-43775699 None:intergenic 30.0%
!! TTTTTGTTGTGTGAATCCAA+AGG - chr3.2:43776100-43776119 None:intergenic 30.0%
!!! ATCTTACCTGTTCTTTTTTC+TGG - chr3.2:43777169-43777188 None:intergenic 30.0%
!!! TCTTACCTGTTCTTTTTTCT+GGG - chr3.2:43777168-43777187 None:intergenic 30.0%
!!! TTTCAGATCTTCTAGTTTTG+AGG - chr3.2:43776958-43776977 None:intergenic 30.0%
AAAAAACCAAATTGCTGCCT+AGG + chr3.2:43772953-43772972 MS.gene94363:intron 35.0%
AAAGGATATCATTAGGGGTT+AGG - chr3.2:43776483-43776502 None:intergenic 35.0%
AAATCTCTTCACTTGCGATA+TGG - chr3.2:43771699-43771718 None:intergenic 35.0%
AAATGTTATGTGGGGTAAGA+TGG - chr3.2:43776332-43776351 None:intergenic 35.0%
AACAGAATTGGTACTATCTG+AGG - chr3.2:43775029-43775048 None:intergenic 35.0%
AACAGCTCTTCAACACATAT+CGG + chr3.2:43776829-43776848 MS.gene94363:intron 35.0%
AAGAGTTAAGTCACTTAAGC+AGG - chr3.2:43775124-43775143 None:intergenic 35.0%
AAGTGAAGAGATTTATAGGC+AGG + chr3.2:43771705-43771724 MS.gene94363:CDS 35.0%
AATATTGGGTCGACATTCTT+AGG - chr3.2:43777335-43777354 None:intergenic 35.0%
ACAGTACTTACATAACTTGG+TGG - chr3.2:43775091-43775110 None:intergenic 35.0%
ACATGTTTCAAGAAGTTCTC+GGG + chr3.2:43774203-43774222 MS.gene94363:intron 35.0%
ACTCACTTGCATTCAACTTT+CGG - chr3.2:43772591-43772610 None:intergenic 35.0%
ACTTGAAGGGTGAAAAACAA+CGG - chr3.2:43776408-43776427 None:intergenic 35.0%
AGAATGTCGACCCAATATTA+TGG + chr3.2:43777336-43777355 MS.gene94363:CDS 35.0%
AGAGTTAAGTCACTTAAGCA+GGG - chr3.2:43775123-43775142 None:intergenic 35.0%
AGATCTAGAGATCAATGAGT+TGG - chr3.2:43776209-43776228 None:intergenic 35.0%
AGTGGATATGTAGTAAGACA+TGG + chr3.2:43773701-43773720 MS.gene94363:intron 35.0%
ATAACATTTGCACTTCCTTG+TGG + chr3.2:43776343-43776362 MS.gene94363:intron 35.0%
ATAACCTATGAGTATGGTGT+CGG + chr3.2:43774295-43774314 MS.gene94363:intron 35.0%
ATCAGACACTCGATATTTAG+CGG - chr3.2:43772355-43772374 None:intergenic 35.0%
ATCCCTTCACAAATTGCATA+TGG - chr3.2:43772811-43772830 None:intergenic 35.0%
ATCGCTTCCATTTAACAACA+TGG - chr3.2:43772743-43772762 None:intergenic 35.0%
ATGTTGTTAAATGGAAGCGA+TGG + chr3.2:43772742-43772761 MS.gene94363:intron 35.0%
ATTTATAGGCAGGAGATTTC+TGG + chr3.2:43771715-43771734 MS.gene94363:CDS 35.0%
CAAAGAAAAGAAGAACACCT+TGG + chr3.2:43775729-43775748 MS.gene94363:CDS 35.0%
CAGCAAAAAAGTAATAGCAG+TGG - chr3.2:43773019-43773038 None:intergenic 35.0%
CAGCTACAGAAATAGTAGAT+TGG - chr3.2:43777036-43777055 None:intergenic 35.0%
GAATCAATAGCACAAGAATG+TGG - chr3.2:43774692-43774711 None:intergenic 35.0%
GAATCTTGCATCTGGATTAT+TGG + chr3.2:43772420-43772439 MS.gene94363:CDS 35.0%
GAATTTGAGAATCTTGCATC+TGG + chr3.2:43772412-43772431 MS.gene94363:CDS 35.0%
GATAATAATGTACTCACTGC+TGG - chr3.2:43772544-43772563 None:intergenic 35.0%
GATCTAGAGATCAATGAGTT+GGG - chr3.2:43776208-43776227 None:intergenic 35.0%
GATGGATGAGAAAGATGTTA+AGG + chr3.2:43772372-43772391 MS.gene94363:CDS 35.0%
GCAATTTCTCATGTTTGTTC+AGG + chr3.2:43773118-43773137 MS.gene94363:intron 35.0%
GCAGTGAATGAGAATTTCTA+TGG + chr3.2:43775625-43775644 MS.gene94363:CDS 35.0%
GTATAGACTTCATTGCTATG+AGG + chr3.2:43774529-43774548 MS.gene94363:intron 35.0%
GTGAATGAGAATTTCTATGG+TGG + chr3.2:43775628-43775647 MS.gene94363:CDS 35.0%
GTGGATATGTAGTAAGACAT+GGG + chr3.2:43773702-43773721 MS.gene94363:intron 35.0%
GTTGAATGATGAATCGAAAC+GGG + chr3.2:43771586-43771605 MS.gene94363:CDS 35.0%
TAACCCCTAATGATATCCTT+TGG + chr3.2:43776482-43776501 MS.gene94363:intron 35.0%
TAGAAGAACTGAGATGTTTC+AGG + chr3.2:43773944-43773963 MS.gene94363:intron 35.0%
TAGACAATCTGCCTGTAAAA+TGG - chr3.2:43775572-43775591 None:intergenic 35.0%
TATGTAGTAAGACATGGGTA+TGG + chr3.2:43773707-43773726 MS.gene94363:intron 35.0%
TCAATTAATGCTTCGTTGCA+AGG - chr3.2:43772460-43772479 None:intergenic 35.0%
TCGCAAGTGAAGAGATTTAT+AGG + chr3.2:43771701-43771720 MS.gene94363:CDS 35.0%
TCGCTTCCATTTAACAACAT+GGG - chr3.2:43772742-43772761 None:intergenic 35.0%
TCTTTGTACCGAATCTCAAT+TGG - chr3.2:43777065-43777084 None:intergenic 35.0%
TGATGTGTATTCTAATGCCA+AGG + chr3.2:43772264-43772283 MS.gene94363:CDS 35.0%
TGCCATATGCAATTTGTGAA+GGG + chr3.2:43772806-43772825 MS.gene94363:intron 35.0%
TGTGCACTTTCTTTGCTAAA+AGG + chr3.2:43774645-43774664 MS.gene94363:intron 35.0%
TGTTGTTAAATGGAAGCGAT+GGG + chr3.2:43772743-43772762 MS.gene94363:intron 35.0%
TTAGAGCCCATGTTGTTAAA+TGG + chr3.2:43772733-43772752 MS.gene94363:intron 35.0%
TTGATTCAGCTACAGTAAGT+AGG + chr3.2:43774861-43774880 MS.gene94363:intron 35.0%
TTTGTTTAAGGATACTCCTC+GGG - chr3.2:43773975-43773994 None:intergenic 35.0%
! AACGAAGCATTAATTGAAGC+AGG + chr3.2:43772463-43772482 MS.gene94363:CDS 35.0%
! AAGGAAGTGCAAATGTTATG+TGG - chr3.2:43776342-43776361 None:intergenic 35.0%
! ACCGTGAAGGAACTAATTTT+TGG - chr3.2:43773335-43773354 None:intergenic 35.0%
! AGGAAGTGCAAATGTTATGT+GGG - chr3.2:43776341-43776360 None:intergenic 35.0%
! CATCTATAGAAAGCTGATTC+TGG - chr3.2:43774627-43774646 None:intergenic 35.0%
! CTACTACACAAACTTTTCTG+TGG - chr3.2:43773594-43773613 None:intergenic 35.0%
! CTTTGTTTAAGGATACTCCT+CGG - chr3.2:43773976-43773995 None:intergenic 35.0%
! TACTTTCACATGCTTTTGAC+AGG + chr3.2:43772167-43772186 MS.gene94363:CDS 35.0%
! TCAGACCAAGTCTTTGTTTA+AGG - chr3.2:43773987-43774006 None:intergenic 35.0%
! TCATATTAAGAGCGCAATAG+AGG + chr3.2:43777364-43777383 MS.gene94363:CDS 35.0%
! TGTTTCAGATCAAGTGTTGT+CGG + chr3.2:43775916-43775935 MS.gene94363:intron 35.0%
! TTCAGATCCTTTTCCATATC+AGG - chr3.2:43771743-43771762 None:intergenic 35.0%
! TTGACCACTTCTTTTCAGAT+CGG + chr3.2:43774761-43774780 MS.gene94363:intron 35.0%
! TTTCTATGGTGGAATGACAA+TGG + chr3.2:43775639-43775658 MS.gene94363:CDS 35.0%
! TTTCTGTCGTACCATTTTAC+AGG + chr3.2:43775558-43775577 MS.gene94363:intron 35.0%
!! CAAGGTGTTCTTCTTTTCTT+TGG - chr3.2:43775731-43775750 None:intergenic 35.0%
!! CAATCTACTATTTCTGTAGC+TGG + chr3.2:43777034-43777053 MS.gene94363:intron 35.0%
!! CTAACTGGAGTTCTTTTTCA+TGG - chr3.2:43775681-43775700 None:intergenic 35.0%
!! CTAATTTTTGGAAACGTTCC+AGG - chr3.2:43773323-43773342 None:intergenic 35.0%
!!! AGTAAAGTGGAAGTTTTGAG+TGG + chr3.2:43776571-43776590 MS.gene94363:intron 35.0%
!!! CTTACCTGTTCTTTTTTCTG+GGG - chr3.2:43777167-43777186 None:intergenic 35.0%
!!! TTCCAACACAAGGTTTTAGA+GGG - chr3.2:43776382-43776401 None:intergenic 35.0%
AAGACCACAGTACTTGGAAT+GGG - chr3.2:43773236-43773255 None:intergenic 40.0%
AAGAGAGGGATGTCATATCT+AGG + chr3.2:43776868-43776887 MS.gene94363:CDS 40.0%
AAGCTATGAAGCGTAGATAG+TGG + chr3.2:43773683-43773702 MS.gene94363:intron 40.0%
AATGAACATGAACTACCACC+TGG + chr3.2:43773302-43773321 MS.gene94363:CDS 40.0%
ACCAATAACACAATCCGAGA+TGG - chr3.2:43771918-43771937 None:intergenic 40.0%
ACGGAGTATGCTTGTAAAGA+GGG + chr3.2:43773837-43773856 MS.gene94363:intron 40.0%
ACTGCAACTGCTCTTAGTTA+TGG + chr3.2:43772031-43772050 MS.gene94363:CDS 40.0%
ACTTCTCGTCTCATAGACAT+AGG - chr3.2:43775758-43775777 None:intergenic 40.0%
AGCATGCGCAATAACTAACA+AGG - chr3.2:43773451-43773470 None:intergenic 40.0%
AGCTTATAGACTATGAAGCC+TGG - chr3.2:43774382-43774401 None:intergenic 40.0%
AGTACCAATTCTGTTGCCAA+TGG + chr3.2:43775034-43775053 MS.gene94363:CDS 40.0%
ATTCAGCTACAGTAAGTAGG+AGG + chr3.2:43774864-43774883 MS.gene94363:intron 40.0%
ATTTCTTCTGTGGAGCTAGT+TGG + chr3.2:43772502-43772521 MS.gene94363:CDS 40.0%
CAATAACTAACAAGGAAGGG+GGG - chr3.2:43773443-43773462 None:intergenic 40.0%
CATCGACAACACTGATCATT+GGG + chr3.2:43772893-43772912 MS.gene94363:intron 40.0%
CATGTTTCAAGAAGTTCTCG+GGG + chr3.2:43774204-43774223 MS.gene94363:intron 40.0%
CCAATAACACAATCCGAGAT+GGG - chr3.2:43771917-43771936 None:intergenic 40.0%
CCTAATTCAGAAATAGGGTG+AGG - chr3.2:43774510-43774529 None:intergenic 40.0%
CGAATTTCTGATAGACCAGA+TGG + chr3.2:43773188-43773207 MS.gene94363:CDS 40.0%
CGAGTTCAACTAAATCTGCA+TGG + chr3.2:43774827-43774846 MS.gene94363:CDS 40.0%
CGCAATAACTAACAAGGAAG+GGG - chr3.2:43773445-43773464 None:intergenic 40.0%
CTGCCATATGCAATTTGTGA+AGG + chr3.2:43772805-43772824 MS.gene94363:intron 40.0%
CTGCCTAGGTTTATCCTTAA+AGG + chr3.2:43772967-43772986 MS.gene94363:intron 40.0%
GAAAAGATAAGGCGAACAGA+AGG + chr3.2:43775593-43775612 MS.gene94363:CDS 40.0%
GAACAGGTAAGATAACTAGC+AGG + chr3.2:43777176-43777195 MS.gene94363:intron 40.0%
GAAGAGAAGAATCCACAGTA+GGG - chr3.2:43776452-43776471 None:intergenic 40.0%
GATAAACCTAGGCAGCAATT+TGG - chr3.2:43772962-43772981 None:intergenic 40.0%
GCAATAACTAACAAGGAAGG+GGG - chr3.2:43773444-43773463 None:intergenic 40.0%
GCGCAATAACTAACAAGGAA+GGG - chr3.2:43773446-43773465 None:intergenic 40.0%
GCTAAATATCGAGTGTCTGA+TGG + chr3.2:43772354-43772373 MS.gene94363:CDS 40.0%
GTTGTTAAATGGAAGCGATG+GGG + chr3.2:43772744-43772763 MS.gene94363:intron 40.0%
TACATTACCTGCATGCATAC+AGG + chr3.2:43774716-43774735 MS.gene94363:intron 40.0%
TAGATATGACATCCCTCTCT+TGG - chr3.2:43776869-43776888 None:intergenic 40.0%
TCACAAATTGCATATGGCAG+TGG - chr3.2:43772805-43772824 None:intergenic 40.0%
TCAGTTGATCAAGGATCACA+CGG + chr3.2:43774952-43774971 MS.gene94363:intron 40.0%
TCCAAATGGGACAAATCAGT+TGG - chr3.2:43773269-43773288 None:intergenic 40.0%
TCCCTCTTGAAACTTCTCAA+GGG + chr3.2:43771768-43771787 MS.gene94363:CDS 40.0%
TCTGGATCCTGATATGGAAA+AGG + chr3.2:43771733-43771752 MS.gene94363:CDS 40.0%
TGAGACATCTAGTTATGCTG+TGG + chr3.2:43774927-43774946 MS.gene94363:intron 40.0%
TGCAGAGAAGATTTCTTCTG+TGG + chr3.2:43772492-43772511 MS.gene94363:CDS 40.0%
TGCGCAATAACTAACAAGGA+AGG - chr3.2:43773447-43773466 None:intergenic 40.0%
TGCGTAGAAAGCTTCCAAAT+GGG - chr3.2:43773282-43773301 None:intergenic 40.0%
TGTCTATGAGACGAGAAGTA+AGG + chr3.2:43775759-43775778 MS.gene94363:CDS 40.0%
TTAGCAATGAAGCAGAGCAT+TGG + chr3.2:43777276-43777295 MS.gene94363:CDS 40.0%
TTGCGTAGAAAGCTTCCAAA+TGG - chr3.2:43773283-43773302 None:intergenic 40.0%
TTTACTAAAGGGTCGTGAGT+CGG - chr3.2:43776655-43776674 None:intergenic 40.0%
! ACTTGCGATATGGTTGACTT+TGG - chr3.2:43771689-43771708 None:intergenic 40.0%
! ATGCTTTTGACAGGAGCTTA+GGG + chr3.2:43772176-43772195 MS.gene94363:CDS 40.0%
! ATTGGTACTATCTGAGGTCT+CGG - chr3.2:43775023-43775042 None:intergenic 40.0%
! CAATGAGTTGGGTAGAGATA+TGG - chr3.2:43776197-43776216 None:intergenic 40.0%
! CTTGCGATATGGTTGACTTT+GGG - chr3.2:43771688-43771707 None:intergenic 40.0%
! GAGATTTCTGGATCCTGATA+TGG + chr3.2:43771727-43771746 MS.gene94363:CDS 40.0%
! GATGGTGTACTTTTCCCAAA+AGG + chr3.2:43773206-43773225 MS.gene94363:CDS 40.0%
! GGAAGTGCAAATGTTATGTG+GGG - chr3.2:43776340-43776359 None:intergenic 40.0%
! TATGAGTATGGTGTCGGATA+CGG + chr3.2:43774301-43774320 MS.gene94363:intron 40.0%
! TGAGAACTGTGTTATTGCTG+TGG + chr3.2:43771538-43771557 MS.gene94363:CDS 40.0%
! TGGTGGATCCAATTGAGATT+CGG + chr3.2:43777054-43777073 MS.gene94363:CDS 40.0%
! TTTGGGAAAAGTACACCATC+TGG - chr3.2:43773206-43773225 None:intergenic 40.0%
!! ACAAATCAGTTGGCTTGGAT+GGG - chr3.2:43773259-43773278 None:intergenic 40.0%
!! ATCAAGTGCTGACACTTGAA+GGG - chr3.2:43776421-43776440 None:intergenic 40.0%
!! ATTTTTGGAAACGTTCCAGG+TGG - chr3.2:43773320-43773339 None:intergenic 40.0%
!! CCTCACCCTATTTCTGAATT+AGG + chr3.2:43774507-43774526 MS.gene94363:intron 40.0%
!! CTTCCAACACAAGGTTTTAG+AGG - chr3.2:43776383-43776402 None:intergenic 40.0%
!! TCTACTATTTCTGTAGCTGG+TGG + chr3.2:43777037-43777056 MS.gene94363:intron 40.0%
!!! AGATCAAGTGTTGTCGGTTT+TGG + chr3.2:43775922-43775941 MS.gene94363:intron 40.0%
!!! AGTTTTGAGTGCAAATCCAG+AGG + chr3.2:43772327-43772346 MS.gene94363:CDS 40.0%
!!! TTCTTTTTTCTGGGGTGGAA+CGG - chr3.2:43777159-43777178 None:intergenic 40.0%
AAACACCGGAGAAGATCCTA+TGG - chr3.2:43776296-43776315 None:intergenic 45.0%
AAACATGCCATTGCAGCCTA+TGG - chr3.2:43772849-43772868 None:intergenic 45.0%
AAACCTCGTATTCTCGCACA+CGG - chr3.2:43772663-43772682 None:intergenic 45.0%
ACAACGGATCTTCCAACACA+AGG - chr3.2:43776392-43776411 None:intergenic 45.0%
ACCATCCATAGGATCTTCTC+CGG + chr3.2:43776288-43776307 MS.gene94363:intron 45.0%
AGAACTCCAGTTAGCTCAAC+AGG + chr3.2:43775687-43775706 MS.gene94363:CDS 45.0%
AGCTCAAAAGGGAAAGCTCT+TGG - chr3.2:43773638-43773657 None:intergenic 45.0%
AGGACCGATCTGAAAAGAAG+TGG - chr3.2:43774768-43774787 None:intergenic 45.0%
ATATGCCCATCTCTGCAAGT+CGG - chr3.2:43771957-43771976 None:intergenic 45.0%
ATGATCAGTGTTGTCGATGG+CGG - chr3.2:43772892-43772911 None:intergenic 45.0%
ATGGGACAAATCAGTTGGCT+TGG - chr3.2:43773264-43773283 None:intergenic 45.0%
CATTGGTCAATGTGACACTC+AGG + chr3.2:43772108-43772127 MS.gene94363:CDS 45.0%
CCAATGATCAGTGTTGTCGA+TGG - chr3.2:43772895-43772914 None:intergenic 45.0%
CCATCGACAACACTGATCAT+TGG + chr3.2:43772892-43772911 MS.gene94363:intron 45.0%
CCCATCTCGGATTGTGTTAT+TGG + chr3.2:43771914-43771933 MS.gene94363:CDS 45.0%
CGAAGAGAAGAATCCACAGT+AGG - chr3.2:43776453-43776472 None:intergenic 45.0%
CTAAACTGAGCATACCGTGA+AGG - chr3.2:43773348-43773367 None:intergenic 45.0%
CTAATGCCAAGGCTTGCATT+AGG + chr3.2:43772275-43772294 MS.gene94363:CDS 45.0%
CTACCTTGAGATCCATGCAT+AGG - chr3.2:43774788-43774807 None:intergenic 45.0%
CTCATAGACATAGGACTCCA+AGG - chr3.2:43775749-43775768 None:intergenic 45.0%
CTCCCTCTTGAAACTTCTCA+AGG + chr3.2:43771767-43771786 MS.gene94363:CDS 45.0%
CTTGCATTCAACTTTCGGCT+CGG - chr3.2:43772586-43772605 None:intergenic 45.0%
CTTTGCTAGTGACCAAGAGA+GGG + chr3.2:43776854-43776873 MS.gene94363:CDS 45.0%
GAAGACCACAGTACTTGGAA+TGG - chr3.2:43773237-43773256 None:intergenic 45.0%
GACGGAGTATGCTTGTAAAG+AGG + chr3.2:43773836-43773855 MS.gene94363:intron 45.0%
GCAAGTCGGTGAAGTATGAT+GGG - chr3.2:43771943-43771962 None:intergenic 45.0%
GCACATGGGGATTAAAACAC+CGG - chr3.2:43776310-43776329 None:intergenic 45.0%
GCATGGATCTCAAGGTAGTA+AGG + chr3.2:43774790-43774809 MS.gene94363:CDS 45.0%
GCCCTTGAGAAGTTTCAAGA+GGG - chr3.2:43771772-43771791 None:intergenic 45.0%
GCTGCAATGGCATGTTTATG+TGG + chr3.2:43772852-43772871 MS.gene94363:intron 45.0%
GGATATCATTAGGGGTTAGG+AGG - chr3.2:43776480-43776499 None:intergenic 45.0%
GGTATGGTAAGATGCGTACA+AGG + chr3.2:43773723-43773742 MS.gene94363:intron 45.0%
GTAACAACCTGTATGCATGC+AGG - chr3.2:43774726-43774745 None:intergenic 45.0%
GTATCCGACACCATACTCAT+AGG - chr3.2:43774302-43774321 None:intergenic 45.0%
GTGCTTTGACTACCATCCAT+AGG + chr3.2:43776277-43776296 MS.gene94363:intron 45.0%
GTTTATGCAGTCAGACACTG+AGG + chr3.2:43775840-43775859 MS.gene94363:intron 45.0%
GTTTGCAAGAGACTGAGGAT+TGG + chr3.2:43776892-43776911 MS.gene94363:CDS 45.0%
TAGGAGTTTGCAAGAGACTG+AGG + chr3.2:43776887-43776906 MS.gene94363:CDS 45.0%
TATTCTCGCACACGGTATGT+GGG - chr3.2:43772655-43772674 None:intergenic 45.0%
TCCACCCCAGAAAAAAGAAC+AGG + chr3.2:43777160-43777179 MS.gene94363:CDS 45.0%
TCTCATGTTTGTTCAGGTCC+AGG + chr3.2:43773124-43773143 MS.gene94363:intron 45.0%
TCTTGAAACTTCTCAAGGGC+CGG + chr3.2:43771772-43771791 MS.gene94363:CDS 45.0%
TGAAACAAAACGCCACCATC+CGG - chr3.2:43771794-43771813 None:intergenic 45.0%
TGAGACGAGAAGTAAGGTAC+TGG + chr3.2:43775765-43775784 MS.gene94363:intron 45.0%
TGCAAGTCGGTGAAGTATGA+TGG - chr3.2:43771944-43771963 None:intergenic 45.0%
TGGTGGAGAATCACGCTTAT+TGG - chr3.2:43775074-43775093 None:intergenic 45.0%
TTACTAAAGGGTCGTGAGTC+GGG - chr3.2:43776654-43776673 None:intergenic 45.0%
TTGACGCGGCAATAATTGCT+GGG + chr3.2:43771978-43771997 MS.gene94363:CDS 45.0%
TTTCAGATCGGTCCTATGCA+TGG + chr3.2:43774773-43774792 MS.gene94363:intron 45.0%
TTTGTGAAGGGATCTCACCA+TGG + chr3.2:43772818-43772837 MS.gene94363:intron 45.0%
! AGCTAGTTGGTTCAGGTTCT+AGG + chr3.2:43772515-43772534 MS.gene94363:CDS 45.0%
! CATGCTTTTGACAGGAGCTT+AGG + chr3.2:43772175-43772194 MS.gene94363:CDS 45.0%
! CGTTTGAGTTTGGGCAAATG+AGG + chr3.2:43772143-43772162 MS.gene94363:CDS 45.0%
! GATGGTAGTCAAAGCACTAG+AGG - chr3.2:43776274-43776293 None:intergenic 45.0%
! GCATTGCAGCGTTTGAGTTT+GGG + chr3.2:43772134-43772153 MS.gene94363:CDS 45.0%
! TGCATTGCAGCGTTTGAGTT+TGG + chr3.2:43772133-43772152 MS.gene94363:CDS 45.0%
! TGCTTTTGACAGGAGCTTAG+GGG + chr3.2:43772177-43772196 MS.gene94363:CDS 45.0%
! TTGGAATGGGATGGCCTTTT+GGG - chr3.2:43773223-43773242 None:intergenic 45.0%
!! AGAGCATTGGCTAACAGAGA+AGG + chr3.2:43777289-43777308 MS.gene94363:CDS 45.0%
!! CTCCCTCTAAAACCTTGTGT+TGG + chr3.2:43776377-43776396 MS.gene94363:intron 45.0%
!! GACAAATCAGTTGGCTTGGA+TGG - chr3.2:43773260-43773279 None:intergenic 45.0%
!! GACTGAGGATTGGCTTTATG+AGG + chr3.2:43776902-43776921 MS.gene94363:CDS 45.0%
!! GAGGATTGGCTTTATGAGGA+CGG + chr3.2:43776906-43776925 MS.gene94363:CDS 45.0%
!! GATCAAGTGCTGACACTTGA+AGG - chr3.2:43776422-43776441 None:intergenic 45.0%
!! GCCAACTGATTTGTCCCATT+TGG + chr3.2:43773265-43773284 MS.gene94363:CDS 45.0%
!!! ACCTGTTCTTTTTTCTGGGG+TGG - chr3.2:43777164-43777183 None:intergenic 45.0%
!!! AGGTTTTAGAGGGAGGTCTT+TGG - chr3.2:43776372-43776391 None:intergenic 45.0%
!!! CAACACAAGGTTTTAGAGGG+AGG - chr3.2:43776379-43776398 None:intergenic 45.0%
!!! GGTTTTAGAGGGAGGTCTTT+GGG - chr3.2:43776371-43776390 None:intergenic 45.0%
ACCGGAGAAGATCCTATGGA+TGG - chr3.2:43776292-43776311 None:intergenic 50.0%
AGCCTAATCCCACCACTTAG+TGG + chr3.2:43776126-43776145 MS.gene94363:intron 50.0%
AGCGCCATTGGCAACAGAAT+TGG - chr3.2:43775041-43775060 None:intergenic 50.0%
AGCGTGGTAGGGTTTGACAT+TGG + chr3.2:43771512-43771531 MS.gene94363:CDS 50.0%
AGTACCACACCACTACACCA+TGG - chr3.2:43772773-43772792 None:intergenic 50.0%
ATACCGTGTGCGAGAATACG+AGG + chr3.2:43772657-43772676 MS.gene94363:intron 50.0%
ATGTAGCCAACCCCACTAAG+TGG - chr3.2:43776141-43776160 None:intergenic 50.0%
ATGTGGGGTAAGATGGCACA+TGG - chr3.2:43776325-43776344 None:intergenic 50.0%
CAGTCGTGTATCAGCCTCAA+AGG - chr3.2:43772010-43772029 None:intergenic 50.0%
CCACAGTACTTGGAATGGGA+TGG - chr3.2:43773232-43773251 None:intergenic 50.0%
CCTAATCCCACCACTTAGTG+GGG + chr3.2:43776128-43776147 MS.gene94363:intron 50.0%
CTCTGTCCTGTTGAGCTAAC+TGG - chr3.2:43775696-43775715 None:intergenic 50.0%
CTTGACGCGGCAATAATTGC+TGG + chr3.2:43771977-43771996 MS.gene94363:CDS 50.0%
GAATCCACAGTAGGGTTCTG+TGG - chr3.2:43776444-43776463 None:intergenic 50.0%
GAGATGGGCATATCTTGACG+CGG + chr3.2:43771964-43771983 MS.gene94363:CDS 50.0%
GATGGGAAGACCACAGTACT+TGG - chr3.2:43773242-43773261 None:intergenic 50.0%
GCCTAATCCCACCACTTAGT+GGG + chr3.2:43776127-43776146 MS.gene94363:intron 50.0%
GCGCAATAGAGGAGCTAAAC+AGG + chr3.2:43777375-43777394 MS.gene94363:CDS 50.0%
GCTGTGGCTTCAGTTGATCA+AGG + chr3.2:43774943-43774962 MS.gene94363:intron 50.0%
GCTTTGCTAGTGACCAAGAG+AGG + chr3.2:43776853-43776872 MS.gene94363:CDS 50.0%
GGCCCTTGAGAAGTTTCAAG+AGG - chr3.2:43771773-43771792 None:intergenic 50.0%
GGTACTATCTTCAGCGCCAT+TGG - chr3.2:43775053-43775072 None:intergenic 50.0%
GGTCCTATGCATGGATCTCA+AGG + chr3.2:43774782-43774801 MS.gene94363:CDS 50.0%
GTATTCTCGCACACGGTATG+TGG - chr3.2:43772656-43772675 None:intergenic 50.0%
TCGATATTTAGCGGTGCCTC+TGG - chr3.2:43772346-43772365 None:intergenic 50.0%
TGATCCACAGAACCCTACTG+TGG + chr3.2:43776437-43776456 MS.gene94363:intron 50.0%
TGTGGGGTAAGATGGCACAT+GGG - chr3.2:43776324-43776343 None:intergenic 50.0%
TTGCGCATGCTCTTCTGTCT+TGG + chr3.2:43773460-43773479 MS.gene94363:intron 50.0%
! AGTCAAAGCACTAGAGGCAG+AGG - chr3.2:43776268-43776287 None:intergenic 50.0%
! CCATCCCATTCCAAGTACTG+TGG + chr3.2:43773229-43773248 MS.gene94363:CDS 50.0%
! CTAAGTGGTGGGATTAGGCT+TGG - chr3.2:43776126-43776145 None:intergenic 50.0%
! CTATCTGAGGTCTCGGACTT+AGG - chr3.2:43775016-43775035 None:intergenic 50.0%
! CTTGGAATGGGATGGCCTTT+TGG - chr3.2:43773224-43773243 None:intergenic 50.0%
! CTTTTGACAGGAGCTTAGGG+GGG + chr3.2:43772179-43772198 MS.gene94363:CDS 50.0%
! GCGAGAAGCAGCGGTTTTTA+GGG + chr3.2:43771633-43771652 MS.gene94363:CDS 50.0%
! GCTTTTGACAGGAGCTTAGG+GGG + chr3.2:43772178-43772197 MS.gene94363:CDS 50.0%
! TAGGGTGAGGTGTCTTGCAA+TGG - chr3.2:43774497-43774516 None:intergenic 50.0%
! TCTGTGGAGCTAGTTGGTTC+AGG + chr3.2:43772508-43772527 MS.gene94363:CDS 50.0%
! TTGCTGGGTTGAAGCCTTTG+AGG + chr3.2:43771993-43772012 MS.gene94363:CDS 50.0%
!! ACTTCACCGACTTGCAGAGA+TGG + chr3.2:43771948-43771967 MS.gene94363:CDS 50.0%
!! AGATTTGGAGGCACCCATCT+CGG + chr3.2:43771901-43771920 MS.gene94363:CDS 50.0%
!! ATTGCTGTGGCAAAGCATCG+CGG + chr3.2:43771551-43771570 MS.gene94363:CDS 50.0%
!! CTTCACCGACTTGCAGAGAT+GGG + chr3.2:43771949-43771968 MS.gene94363:CDS 50.0%
ACGCAGCCTAATGCAAGCCT+TGG - chr3.2:43772284-43772303 None:intergenic 55.0%
AGCCAACCCCACTAAGTGGT+GGG - chr3.2:43776137-43776156 None:intergenic 55.0%
AGCTCAACAGGACAGAGCTG+TGG + chr3.2:43775699-43775718 MS.gene94363:CDS 55.0%
ATCCCACCACTTAGTGGGGT+TGG + chr3.2:43776132-43776151 MS.gene94363:intron 55.0%
GAAACTTCTCAAGGGCCGGA+TGG + chr3.2:43771776-43771795 MS.gene94363:CDS 55.0%
GCAAGTGAGTGTGTAGCTCG+TGG + chr3.2:43772601-43772620 MS.gene94363:intron 55.0%
GTGAAGGGATCTCACCATGG+TGG + chr3.2:43772821-43772840 MS.gene94363:intron 55.0%
GTGGGGTAAGATGGCACATG+GGG - chr3.2:43776323-43776342 None:intergenic 55.0%
TAGCCAACCCCACTAAGTGG+TGG - chr3.2:43776138-43776157 None:intergenic 55.0%
TCTGCTTTGGCGAGAAGCAG+CGG + chr3.2:43771624-43771643 MS.gene94363:CDS 55.0%
! CCCCACTAAGTGGTGGGATT+AGG - chr3.2:43776131-43776150 None:intergenic 55.0%
! GGCGAGAAGCAGCGGTTTTT+AGG + chr3.2:43771632-43771651 MS.gene94363:CDS 55.0%
!! GATGTTTCAGGAAGTGCCCG+AGG + chr3.2:43773956-43773975 MS.gene94363:intron 55.0%
!! TCAGTGTTGTCGATGGCGGA+AGG - chr3.2:43772888-43772907 None:intergenic 55.0%
!! TTGCTGTGGCAAAGCATCGC+GGG + chr3.2:43771552-43771571 MS.gene94363:CDS 55.0%
!!! CAGCGGTTTTTAGGGTCTGC+TGG + chr3.2:43771641-43771660 MS.gene94363:CDS 55.0%
ACCCCTGCTGTCGTCTGCTT+TGG + chr3.2:43771611-43771630 MS.gene94363:CDS 60.0%
ACTTCTCAAGGGCCGGATGG+TGG + chr3.2:43771779-43771798 MS.gene94363:CDS 60.0%
ATGGGGCTGCCATGGTGTAG+TGG + chr3.2:43772761-43772780 MS.gene94363:intron 60.0%
CGCCAAAGCAGACGACAGCA+GGG - chr3.2:43771616-43771635 None:intergenic 60.0%
GCCAAAGCAGACGACAGCAG+GGG - chr3.2:43771615-43771634 None:intergenic 60.0%
GCTGCCATGGTGTAGTGGTG+TGG + chr3.2:43772766-43772785 MS.gene94363:intron 60.0%
GGTCGTGAGTCGGGACAGAA+AGG - chr3.2:43776645-43776664 None:intergenic 60.0%
TCGCCAAAGCAGACGACAGC+AGG - chr3.2:43771617-43771636 None:intergenic 60.0%
TGACAGGAGCTTAGGGGGGA+GGG + chr3.2:43772183-43772202 MS.gene94363:CDS 60.0%
TTGACAGGAGCTTAGGGGGG+AGG + chr3.2:43772182-43772201 MS.gene94363:CDS 60.0%
! GGAGGTCTTTGGGAGCCACA+AGG - chr3.2:43776361-43776380 None:intergenic 60.0%
! TCTCACCATGGTGGCGCCAT+AGG + chr3.2:43772830-43772849 MS.gene94363:intron 60.0%
AGGGGGGAGGGACTTTGACG+AGG + chr3.2:43772195-43772214 MS.gene94363:CDS 65.0%
GGTGGCGCCATAGGCTGCAA+TGG + chr3.2:43772839-43772858 MS.gene94363:intron 65.0%
TGCAGCCTATGGCGCCACCA+TGG - chr3.2:43772838-43772857 None:intergenic 65.0%
TGGAAGCGATGGGGCTGCCA+TGG + chr3.2:43772753-43772772 MS.gene94363:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 43771509 43777505 43771509 ID=MS.gene94363
chr3.2 mRNA 43771509 43777505 43771509 ID=MS.gene94363.t1;Parent=MS.gene94363
chr3.2 exon 43771509 43772546 43771509 ID=MS.gene94363.t1.exon1;Parent=MS.gene94363.t1
chr3.2 CDS 43771509 43772546 43771509 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43773140 43773352 43773140 ID=MS.gene94363.t1.exon2;Parent=MS.gene94363.t1
chr3.2 CDS 43773140 43773352 43773140 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43774779 43774874 43774779 ID=MS.gene94363.t1.exon3;Parent=MS.gene94363.t1
chr3.2 CDS 43774779 43774874 43774779 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43774956 43775099 43774956 ID=MS.gene94363.t1.exon4;Parent=MS.gene94363.t1
chr3.2 CDS 43774956 43775099 43774956 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43775580 43775780 43775580 ID=MS.gene94363.t1.exon5;Parent=MS.gene94363.t1
chr3.2 CDS 43775580 43775780 43775580 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43776834 43776980 43776834 ID=MS.gene94363.t1.exon6;Parent=MS.gene94363.t1
chr3.2 CDS 43776834 43776980 43776834 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43777053 43777181 43777053 ID=MS.gene94363.t1.exon7;Parent=MS.gene94363.t1
chr3.2 CDS 43777053 43777181 43777053 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43777266 43777396 43777266 ID=MS.gene94363.t1.exon8;Parent=MS.gene94363.t1
chr3.2 CDS 43777266 43777396 43777266 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
chr3.2 exon 43777499 43777505 43777499 ID=MS.gene94363.t1.exon9;Parent=MS.gene94363.t1
chr3.2 CDS 43777499 43777505 43777499 ID=cds.MS.gene94363.t1;Parent=MS.gene94363.t1
Gene Sequence

>MS.gene94363

ATGAGCGTGGTAGGGTTTGACATTGGTAATGAGAACTGTGTTATTGCTGTGGCAAAGCATCGCGGGATTGATGTTTTGTTGAATGATGAATCGAAACGGGAAACCCCTGCTGTCGTCTGCTTTGGCGAGAAGCAGCGGTTTTTAGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACCCAAAGTCAACCATATCGCAAGTGAAGAGATTTATAGGCAGGAGATTTCTGGATCCTGATATGGAAAAGGATCTGAAAATGCTCCCTCTTGAAACTTCTCAAGGGCCGGATGGTGGCGTTTTGTTTCATTTGAAATACTTAGATGGGATTCATACGTTTACGCCAGTTCAAATAATGTCTATGCTCTTTGCTCACTTGAAGACTATGACAGAAAAAGATTTGGAGGCACCCATCTCGGATTGTGTTATTGGTATCCCATCATACTTCACCGACTTGCAGAGATGGGCATATCTTGACGCGGCAATAATTGCTGGGTTGAAGCCTTTGAGGCTGATACACGACTGTACTGCAACTGCTCTTAGTTATGGAATTTACAAAACAAATTTTCAGAGTGATGGTCCAAGTTATGTTGCATTTATTGACATTGGTCAATGTGACACTCAGGTCTGCATTGCAGCGTTTGAGTTTGGGCAAATGAGGATACTTTCACATGCTTTTGACAGGAGCTTAGGGGGGAGGGACTTTGACGAGGTTCTGTTTACTCATTTTGCTGAAAAATTCAAGGAACAGTACAAAATTGATGTGTATTCTAATGCCAAGGCTTGCATTAGGCTGCGTGCTGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCCAGAGGCACCGCTAAATATCGAGTGTCTGATGGATGAGAAAGATGTTAAGGGCTTTATAACAAGGGAAGAATTTGAGAATCTTGCATCTGGATTATTGGAGAGAATTTCAGTACCTTGCAACGAAGCATTAATTGAAGCAGGCTTGAATGCAGAGAAGATTTCTTCTGTGGAGCTAGTTGGTTCAGGTTCTAGGATTCCAGCAGTGAGTACATTATTATCTTCTTTATTCAAGAGAGAACCGAGCCGAAAGTTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCTATGCTCAGTCCCACATACCGTGTGCGAGAATACGAGGTTTGTTTATTTTTAAGTCTCTTCTTATTCTATGTCTATGTTATATATTGCAGATTAGAGCCCATGTTGTTAAATGGAAGCGATGGGGCTGCCATGGTGTAGTGGTGTGGTACTTTTTTTTGACCACTGCCATATGCAATTTGTGAAGGGATCTCACCATGGTGGCGCCATAGGCTGCAATGGCATGTTTATGTGGCAGATTTTGACCTTCCGCCATCGACAACACTGATCATTGGGTTTCTAGATTCTTAGAAATGTAATTTAACAATTGTCAAAAAAACCAAATTGCTGCCTAGGTTTATCCTTAAAGGTTTATTTTCAGTATTTAAATTATCTTCCACTGCTATTACTTTTTTGCTGATGTAAAATGGAATTTTTGTTATTTTGATTTCTGATTGATATTGCCTTTATTTGTAATATTGTACCCGTTTAAATCAATGCAATTTCTCATGTTTGTTCAGGTCCAGGATATTAGTCCTTTTTCATATGGACTTCAATCAGATAAAGTTCGAATTTCTGATAGACCAGATGGTGTACTTTTCCCAAAAGGCCATCCCATTCCAAGTACTGTGGTCTTCCCATCCAAGCCAACTGATTTGTCCCATTTGGAAGCTTTCTACGCAAATGAACATGAACTACCACCTGGAACGTTTCCAAAAATTAGTTCCTTCACGGTATGCTCAGTTTAGAACATTTGGCTAATGTGATAAAGTTAAATTTTCTTCTGCGAATGTTTTATTTGTTATGTATTTCTTCTCACTCCCCCCTTCCTTGTTAGTTATTGCGCATGCTCTTCTGTCTTGGTGTTTTTGTTTTTAGTACTAGGCGTGTAGTATAGCTTCTATGTGAGATATTTTATTATGTAAATCTGTGAGCTTTTTTACCTTTATTTTCTTATATTAGTGTTTAAATCCACAGAAAAGTTTGTGTAGTAGATATTTTCATCATTAGCACAACCAAGAGCTTTCCCTTTTGAGCTGTTATTTATAATAATCTATTTATAGAAGCTATGAAGCGTAGATAGTGGATATGTAGTAAGACATGGGTATGGTAAGATGCGTACAAGGATTATTATTATTATTTTTTTGAATTTCAGGATACTATATAGCCTAGATACCTTAACAACAATTCATAAAACAAAAACTTATATAGATATAGACGGAGTATGCTTGTAAAGAGGGATACATTGATCATTCTGTAGTAGTATATCACGCTTTCTAAAAAGATAAGTTCTGCTAGGATATTATCAACAAAAGTACATTTAGTAGAAGAACTGAGATGTTTCAGGAAGTGCCCGAGGAGTATCCTTAAACAAAGACTTGGTCTGATACAACACATGTAACTTAACAAATTTTATAGAACAAACAATTTGTGTAGATGTAGAATGTTTGTAAAAGAACATACACTCATCATTCCTTATAATATATAACTGTGATGATCACAATTTATAAAAAGATACTTGTGATCATAACTGAAATAAGAGTTTCCACTTATGTCATAATATATTCTACCCTATGTAACTCAACATGTTTCAAGAAGTTCTCGGGGAGTATCCTAAAACAAAGTTTCTAAGAAATATTAAAAACAGGTTACTCTTTTGGGACATGTATCATGAAATAACCTATGAGTATGGTGTCGGATACGGATACAACACCAATACTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTATCCAGGCTTCATAGTCTATAAGCTGCCATACATTATATTTGTAAGCATCTCCAAATATTGTCTGATTTATGTTTTATTGGCATCAAGTTAGAAATTTAACTTGAATGGATCTGGGGCCATTGCAAGACACCTCACCCTATTTCTGAATTAGGTATAGACTTCATTGCTATGAGGTCTGTGATTATTGCTTGTTCTGACATCAAAGAAAGCTAATGTTGTAAAACTAATTATGCATTAGAATAAAAGCCAGAATCAGCTTTCTATAGATGTGCACTTTCTTTGCTAAAAGGAAGTATATATGGTAGATTTAGCCACATTCTTGTGCTATTGATTCAGTGTACATTACCTGCATGCATACAGGTTGTTACATGCTTACACATTTGTTGACCACTTCTTTTCAGATCGGTCCTATGCATGGATCTCAAGGTAGTAAGGAAAAAGTTAAAGTTCGAGTTCAACTAAATCTGCATGGCATTTTCAGTATTGATTCAGCTACAGTAAGTAGGAGGTTTTATTTTTCCATTTTTTGGTATAAATTATGATTTTTTCTGAGACATCTAGTTATGCTGTGGCTTCAGTTGATCAAGGATCACACGGATGATCATCATTCAAATTTTGATGCAATGGATGTCGATCCTAAGTCCGAGACCTCAGATAGTACCAATTCTGTTGCCAATGGCGCTGAAGATAGTACCAATAAGCGTGATTCTCCACCAAGTTATGTAAGTACTGTCATGTTAATCCCTGCTTAAGTGACTTAACTCTTTTCTTTCTTTTTCTTTTTCTTTTGGAGAGATATCAGATGTTAGAGATTTCTAGTAAATTTATCATTTGAGCATGAAAAGTTTTATCAAAGTAGAGTTTTTCTATCATATGCGAACTTACATAATATAAGAAGTCAAAACTTGTAAATGTTAATATTAAATACATTTTGTAATAAATAATTGTTGTTTTCAAGATTTTTTTTTACTAGTTTTAGTCGTCTTAACTCTTATCCTATATATTGCATAGGATAGACAAACCCATAAATGTAATATGGCAATCATTTTTTATGACAAATTCTGAGACATCTGTTATGACTGACTTTCACAATCACTATAGTATGCTTAGTTTTTTATTTGATTTTATCTTGTAGTGATAGTTTTGATTGTAGATATGTTTTTTCAAGTATATAACAGTTTTTCTGTCGTACCATTTTACAGGCAGATTGTCTAAGAAAAGATAAGGCGAACAGAAGGATTCCTATTGCAGTGAATGAGAATTTCTATGGTGGAATGACAATGGAAGAGATTTCTGAAGCCCATGAAAAAGAACTCCAGTTAGCTCAACAGGACAGAGCTGTGGAGCTAACCAAAGAAAAGAAGAACACCTTGGAGTCCTATGTCTATGAGACGAGAAGTAAGGTACTGGTTAAAAATATAAATAAGACGCAGTTGACTAATTTCTTTGATTCATGATACTTGTTTATGCAGTCAGACACTGAGGTTTTGAGTGATTGTGTTTTCATTTTATAATTTTTAAAAGCAATTTTGAAAAACTGTTTCAGATCAAGTGTTGTCGGTTTTGGCTTTTTACTTTTAAAAATATGAAATAAGAAACTGTTTTGTAAAACATTTTTAGAAAACATACCAACCGAACAACTATTTTACTTTTTAAAAACAGAAAATAGTTTTAAAATGCAGTGATTAAAAAGAAATGAACTTTACTACACTGTTTTATCCTTTGGATTCACACAACAAAAACAACCAAGCCTAATCCCACCACTTAGTGGGGTTGGCTACATTGATTAATCGACACCATAATGTTCTAGCATATACCATATCTCTACCCAACTCATTGATCTCTAGATCTTTCTTAATAGATTATCTTATATTTTTTATTGGTCTTCCTCTGCCTCTAGTGCTTTGACTACCATCCATAGGATCTTCTCCGGTGTTTTAATCCCCATGTGCCATCTTACCCCACATAACATTTGCACTTCCTTGTGGCTCCCAAAGACCTCCCTCTAAAACCTTGTGTTGGAAGATCCGTTGTTTTTCACCCTTCAAGTGTCAGCACTTGATCCACAGAACCCTACTGTGGATTCTTCTCTTCGCTTTCCTCCTAACCCCTAATGATATCCTTTGGATTCTCATATTAAAAGAAAAAATGTTAGATGCTCCTTTTTAAAGAACCCATGCTATAACTTTATCAAGTAAAGTGGAAGTTTTGAGTGGATTAAAATAAAAACTTCATGGTTTAATTACCGAAGAATTGTTTTCATGCCTTTCTGTCCCGACTCACGACCCTTTAGTAAATGCAAAACTCGAACTGCTTAGCTGTTACAATACTATGAAATATTATCTGCACAGGGTCTCAAATTTCAAATTTCCAAACTTTTATCTTATTTCATGCTATTGATTTTATGCATGCATTTGAAGATTCTGTTAATTAAATTAATTTGCATACATAAACAGCTCTTCAACACATATCGGAGCTTTGCTAGTGACCAAGAGAGGGATGTCATATCTAGGAGTTTGCAAGAGACTGAGGATTGGCTTTATGAGGACGGTGATGATGAAACTGAACACGCTTATACCTCAAAACTAGAAGATCTGAAAAAGGTATTTTTTTGCTTTTCTATTTTCAATGTTTCTCTTGTTATACTTATTGTTTCCAATCTACTATTTCTGTAGCTGGTGGATCCAATTGAGATTCGGTACAAAGATGATGAAGAAAGAACACAAGCTATAAAAGATTTATCAAAATTCATTTCAGATATTCGCAAGTTTGCAGATTCCGTTCCACCCCAGAAAAAAGAACAGGTAAGATAACTAGCAGGCCACTATATATTATTGTGATGCTGCTCTTAAGATAAGCTTTTAATTGGGATTTTATTTTATTTTCAGATCATTGATATTAGCAATGAAGCAGAGCATTGGCTAACAGAGAAGGTGCAACAACAAGAATCTTATCCTAAGAATGTCGACCCAATATTATGGTCAAGTCATATTAAGAGCGCAATAGAGGAGCTAAACAGGTATAGTGCTTATCCTTTCTGTTTTCCTTAATATTAGTTTATATTTGTCATTTTCTGGTTATATGGTTTGATTTGGTTTGATATATTCTATCATTAGAACAGGAAATGA

Protein sequence

>MS.gene94363.t1

MSVVGFDIGNENCVIAVAKHRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMHPKSTISQVKRFIGRRFLDPDMEKDLKMLPLETSQGPDGGVLFHLKYLDGIHTFTPVQIMSMLFAHLKTMTEKDLEAPISDCVIGIPSYFTDLQRWAYLDAAIIAGLKPLRLIHDCTATALSYGIYKTNFQSDGPSYVAFIDIGQCDTQVCIAAFEFGQMRILSHAFDRSLGGRDFDEVLFTHFAEKFKEQYKIDVYSNAKACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFENLASGLLERISVPCNEALIEAGLNAEKISSVELVGSGSRIPAVQDISPFSYGLQSDKVRISDRPDGVLFPKGHPIPSTVVFPSKPTDLSHLEAFYANEHELPPGTFPKISSFTIGPMHGSQGSKEKVKVRVQLNLHGIFSIDSATLIKDHTDDHHSNFDAMDVDPKSETSDSTNSVANGAEDSTNKRDSPPSYADCLRKDKANRRIPIAVNENFYGGMTMEEISEAHEKELQLAQQDRAVELTKEKKNTLESYVYETRSKLFNTYRSFASDQERDVISRSLQETEDWLYEDGDDETEHAYTSKLEDLKKLVDPIEIRYKDDEERTQAIKDLSKFISDIRKFADSVPPQKKEQIIDISNEAEHWLTEKVQQQESYPKNVDPILWSSHIKSAIEELNRK