Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94408.t1 | XP_013447502.1 | 97.9 | 569 | 10 | 1 | 1 | 569 | 1 | 567 | 7.50E-299 | 1035.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94408.t1 | Q9C5D6 | 67.8 | 547 | 167 | 5 | 25 | 565 | 21 | 564 | 1.4e-200 | 700.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94408.t1 | A0A072U6U4 | 97.9 | 569 | 10 | 1 | 1 | 569 | 1 | 567 | 5.4e-299 | 1035.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94408 | MS.gene073450 | PPI |
| MS.gene041367 | MS.gene94408 | PPI |
| MS.gene58674 | MS.gene94408 | PPI |
| MS.gene94408 | MS.gene00402 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94408.t1 | MTR_7g007850 | 98.594 | 569 | 6 | 1 | 1 | 569 | 1 | 567 | 0.0 | 1120 |
| MS.gene94408.t1 | MTR_7g007850 | 93.656 | 599 | 6 | 2 | 1 | 569 | 1 | 597 | 0.0 | 1104 |
| MS.gene94408.t1 | MTR_7g007850 | 98.577 | 492 | 5 | 1 | 1 | 492 | 1 | 490 | 0.0 | 955 |
| MS.gene94408.t1 | MTR_7g007850 | 98.574 | 491 | 5 | 1 | 1 | 491 | 1 | 489 | 0.0 | 954 |
| MS.gene94408.t1 | MTR_6g027660 | 31.767 | 617 | 341 | 13 | 1 | 550 | 1 | 604 | 3.41e-89 | 288 |
| MS.gene94408.t1 | MTR_6g027680 | 33.102 | 577 | 303 | 14 | 10 | 520 | 12 | 571 | 1.50e-87 | 282 |
| MS.gene94408.t1 | MTR_6g027630 | 35.797 | 433 | 264 | 5 | 19 | 444 | 13 | 438 | 7.44e-83 | 270 |
| MS.gene94408.t1 | MTR_6g027630 | 35.797 | 433 | 264 | 5 | 19 | 444 | 13 | 438 | 2.80e-82 | 270 |
| MS.gene94408.t1 | MTR_6g027650 | 35.321 | 436 | 261 | 6 | 16 | 444 | 10 | 431 | 9.76e-80 | 263 |
| MS.gene94408.t1 | MTR_7g086510 | 38.191 | 398 | 234 | 4 | 51 | 441 | 38 | 430 | 3.57e-79 | 262 |
| MS.gene94408.t1 | MTR_7g086610 | 36.930 | 417 | 242 | 6 | 31 | 438 | 17 | 421 | 5.43e-78 | 258 |
| MS.gene94408.t1 | MTR_2g035430 | 30.245 | 572 | 368 | 13 | 8 | 562 | 26 | 583 | 1.43e-73 | 246 |
| MS.gene94408.t1 | MTR_1g030660 | 31.238 | 541 | 339 | 9 | 44 | 566 | 60 | 585 | 3.73e-73 | 245 |
| MS.gene94408.t1 | MTR_8g089360 | 31.560 | 545 | 344 | 12 | 31 | 565 | 42 | 567 | 6.50e-71 | 238 |
| MS.gene94408.t1 | MTR_8g089360 | 31.793 | 541 | 340 | 12 | 31 | 561 | 59 | 580 | 7.69e-71 | 239 |
| MS.gene94408.t1 | MTR_8g089320 | 30.370 | 540 | 349 | 13 | 8 | 535 | 26 | 550 | 6.55e-70 | 236 |
| MS.gene94408.t1 | MTR_1g111740 | 31.100 | 582 | 342 | 11 | 6 | 555 | 2 | 556 | 6.83e-70 | 236 |
| MS.gene94408.t1 | MTR_8g461380 | 30.728 | 563 | 350 | 12 | 8 | 549 | 33 | 576 | 4.17e-65 | 223 |
| MS.gene94408.t1 | MTR_6g027630 | 34.270 | 356 | 223 | 3 | 95 | 444 | 3 | 353 | 4.36e-63 | 216 |
| MS.gene94408.t1 | MTR_4g099270 | 32.775 | 537 | 328 | 16 | 37 | 556 | 6 | 526 | 5.90e-57 | 200 |
| MS.gene94408.t1 | MTR_4g099270 | 37.297 | 370 | 214 | 10 | 33 | 391 | 20 | 382 | 9.39e-52 | 182 |
| MS.gene94408.t1 | MTR_8g089340 | 27.778 | 450 | 297 | 8 | 130 | 566 | 3 | 437 | 2.46e-41 | 155 |
| MS.gene94408.t1 | MTR_4g099270 | 31.235 | 429 | 266 | 13 | 142 | 556 | 1 | 414 | 4.21e-38 | 146 |
| MS.gene94408.t1 | MTR_4g099270 | 38.014 | 292 | 163 | 10 | 33 | 313 | 20 | 304 | 4.76e-36 | 137 |
| MS.gene94408.t1 | MTR_6g027670 | 28.956 | 297 | 157 | 4 | 278 | 520 | 6 | 302 | 7.92e-33 | 128 |
| MS.gene94408.t1 | MTR_7g007840 | 79.661 | 59 | 12 | 0 | 29 | 87 | 25 | 83 | 2.37e-23 | 94.7 |
| MS.gene94408.t1 | MTR_6g034535 | 28.700 | 223 | 154 | 4 | 345 | 566 | 89 | 307 | 3.72e-14 | 73.9 |
| MS.gene94408.t1 | MTR_8g089342 | 43.056 | 72 | 40 | 1 | 44 | 114 | 66 | 137 | 5.34e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94408.t1 | AT1G05940 | 70.450 | 555 | 155 | 5 | 17 | 565 | 13 | 564 | 0.0 | 755 |
| MS.gene94408.t1 | AT1G05940 | 71.124 | 516 | 143 | 4 | 17 | 526 | 13 | 528 | 0.0 | 701 |
| MS.gene94408.t1 | AT1G05940 | 71.518 | 481 | 132 | 3 | 17 | 492 | 13 | 493 | 0.0 | 656 |
| MS.gene94408.t1 | AT1G05940 | 69.933 | 449 | 127 | 4 | 122 | 565 | 1 | 446 | 0.0 | 610 |
| MS.gene94408.t1 | AT3G03720 | 32.253 | 586 | 328 | 11 | 26 | 550 | 1 | 578 | 2.71e-95 | 303 |
| MS.gene94408.t1 | AT5G36940 | 32.215 | 596 | 320 | 12 | 26 | 551 | 4 | 585 | 7.06e-85 | 276 |
| MS.gene94408.t1 | AT4G21120 | 29.895 | 572 | 378 | 8 | 8 | 569 | 24 | 582 | 5.33e-80 | 263 |
| MS.gene94408.t1 | AT1G58030 | 35.646 | 418 | 243 | 8 | 25 | 430 | 18 | 421 | 7.54e-79 | 261 |
| MS.gene94408.t1 | AT2G34960 | 31.239 | 573 | 357 | 10 | 4 | 559 | 14 | 566 | 7.10e-77 | 254 |
| MS.gene94408.t1 | AT5G04770 | 32.967 | 546 | 330 | 13 | 32 | 555 | 33 | 564 | 7.73e-74 | 246 |
| MS.gene94408.t1 | AT1G17120 | 30.978 | 552 | 356 | 10 | 10 | 549 | 40 | 578 | 9.14e-70 | 236 |
| MS.gene94408.t1 | AT3G10600 | 31.849 | 584 | 356 | 13 | 4 | 562 | 6 | 572 | 6.85e-68 | 230 |
| MS.gene94408.t1 | AT5G04770 | 36.074 | 377 | 215 | 9 | 32 | 390 | 33 | 401 | 2.56e-61 | 208 |
| MS.gene94408.t1 | AT4G21120 | 28.539 | 438 | 305 | 3 | 133 | 569 | 2 | 432 | 2.00e-56 | 196 |
| MS.gene94408.t1 | AT3G10600 | 30.046 | 436 | 280 | 8 | 142 | 562 | 1 | 426 | 1.73e-50 | 180 |
| MS.gene94408.t1 | AT5G04770 | 31.163 | 430 | 267 | 10 | 142 | 555 | 1 | 417 | 1.04e-48 | 175 |
Find 134 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTGCTGTTGCTGTTTC+TGG | -0.028109 | 7.1:-86414607 | MS.gene94408:CDS |
| TTCTTTAACATGTTCTTATT+TGG | 0.134061 | 7.1:-86413736 | MS.gene94408:CDS |
| CCCCTCTTCATTCTCAGATT+TGG | 0.162253 | 7.1:-86415640 | MS.gene94408:CDS |
| CCCTCTTCATTCTCAGATTT+GGG | 0.191090 | 7.1:-86415639 | MS.gene94408:CDS |
| GTCTTTGACCTTATACTTCT+TGG | 0.209325 | 7.1:-86418412 | MS.gene94408:CDS |
| AGACCATGTCCAATCCATTT+TGG | 0.221103 | 7.1:+86416810 | None:intergenic |
| TGAAGAGGGGTGTGGCGTTT+GGG | 0.255331 | 7.1:+86415653 | None:intergenic |
| GATTTGCCAATAGGCATAAT+TGG | 0.263921 | 7.1:-86416029 | MS.gene94408:CDS |
| TGTGATTCTAAGCATTCTTA+TGG | 0.276279 | 7.1:-86413586 | MS.gene94408:CDS |
| TAATGCTTGACTATCATATT+GGG | 0.287047 | 7.1:-86416911 | MS.gene94408:CDS |
| GTTATTGTTGTCATCTTTGC+TGG | 0.287928 | 7.1:-86416552 | MS.gene94408:CDS |
| TTAATGCTTGACTATCATAT+TGG | 0.288983 | 7.1:-86416912 | MS.gene94408:CDS |
| ATGAAGAGGGGTGTGGCGTT+TGG | 0.293761 | 7.1:+86415652 | None:intergenic |
| ATTAGCATTGGTGCTATTGC+TGG | 0.302863 | 7.1:-86415867 | MS.gene94408:CDS |
| CTTAGATTCTTCAGCAGAAT+TGG | 0.303211 | 7.1:+86416416 | None:intergenic |
| GGAATGTTATCTTTGAAAAC+AGG | 0.303937 | 7.1:+86416831 | None:intergenic |
| GGAGTATGCTTGGTGATTAC+TGG | 0.320177 | 7.1:-86415975 | MS.gene94408:CDS |
| GGTATAAGACCCGTCTTTAC+AGG | 0.324045 | 7.1:-86416483 | MS.gene94408:CDS |
| GCCGGTATCTTCGTTGTTAC+CGG | 0.332457 | 7.1:-86418370 | MS.gene94408:CDS |
| ATGCAAACATTTGGTACAAT+AGG | 0.339118 | 7.1:+86413760 | None:intergenic |
| TGGCTGTGTTGCCAGCATTA+TGG | 0.349017 | 7.1:-86415615 | MS.gene94408:CDS |
| TCAAAGATAACATTCCAAAA+TGG | 0.351156 | 7.1:-86416824 | MS.gene94408:CDS |
| AAGACAGCTCGCGATAATTC+CGG | 0.360533 | 7.1:-86418460 | MS.gene94408:CDS |
| TTTCAGAGGGATTTGCCAAT+AGG | 0.372116 | 7.1:-86416038 | MS.gene94408:intron |
| TGTGTTGCCAGCATTATGGC+TGG | 0.373393 | 7.1:-86415611 | MS.gene94408:CDS |
| GTCGGAGTTTACGCGATATA+TGG | 0.373801 | 7.1:-86413564 | MS.gene94408:CDS |
| TCTCGATTTCCTGCTGTTGT+TGG | 0.376719 | 7.1:-86416999 | MS.gene94408:CDS |
| CGATTTCCTGCTGTTGTTGG+AGG | 0.386552 | 7.1:-86416996 | MS.gene94408:CDS |
| AGGCTTCCAATTATGCCTAT+TGG | 0.388084 | 7.1:+86416023 | None:intergenic |
| CCTTGTTGGTCTCTATGTTC+AGG | 0.391513 | 7.1:-86415829 | MS.gene94408:intron |
| CTTCATTCTCAGATTTGGGT+TGG | 0.398047 | 7.1:-86415635 | MS.gene94408:CDS |
| AAGACGGGTCTTATACCATT+TGG | 0.403482 | 7.1:+86416489 | None:intergenic |
| ATGGTTCCATACAGTCTTCT+AGG | 0.408151 | 7.1:-86415951 | MS.gene94408:CDS |
| TCTAGGAGAAGAAGCTCCTT+TGG | 0.410647 | 7.1:-86415934 | MS.gene94408:CDS |
| GTAGTCTTCTTTGCGTATGT+TGG | 0.421190 | 7.1:-86416453 | MS.gene94408:CDS |
| GGCTATATCTTGGACTTGGC+AGG | 0.423128 | 7.1:-86415712 | MS.gene94408:CDS |
| ACTCATTGAGGTGGTTCCTC+TGG | 0.431209 | 7.1:+86413489 | None:intergenic |
| CTCCGATTCCAAGAAGTATA+AGG | 0.433685 | 7.1:+86418404 | None:intergenic |
| TTGAGGTTGATGTTTCCAAC+TGG | 0.433700 | 7.1:-86416524 | MS.gene94408:CDS |
| AATCGGAGCTAAGGCATTGA+TGG | 0.434753 | 7.1:+86416767 | None:intergenic |
| GTGAGAAGTATTAGTAGAAT+CGG | 0.435463 | 7.1:+86416750 | None:intergenic |
| TGATGGAGAGATGACGCGTT+TGG | 0.435931 | 7.1:+86418486 | None:intergenic |
| GAGCAGTCTCGGCTATATCT+TGG | 0.442697 | 7.1:-86415722 | MS.gene94408:intron |
| CTCACTATAATTCTCTGTCT+TGG | 0.443992 | 7.1:-86416732 | MS.gene94408:CDS |
| GTTTCTATTCTGATTAGCAT+TGG | 0.444221 | 7.1:-86415879 | MS.gene94408:CDS |
| TGGTCTCCGTTTGTTCCAAA+TGG | 0.449673 | 7.1:-86416504 | MS.gene94408:CDS |
| GACCTTATACTTCTTGGAAT+CGG | 0.452507 | 7.1:-86418406 | MS.gene94408:CDS |
| TTAAAGAAGATGCAAACATT+TGG | 0.456562 | 7.1:+86413751 | None:intergenic |
| GAAGAGGGGTGTGGCGTTTG+GGG | 0.463035 | 7.1:+86415654 | None:intergenic |
| GCTGTTTCTGGATTTGCTGC+GGG | 0.465037 | 7.1:-86414595 | MS.gene94408:CDS |
| AGCGTATCTATATACATATA+CGG | 0.465929 | 7.1:-86416973 | MS.gene94408:CDS |
| TGAACTTTAGCAAATATTGC+GGG | 0.468776 | 7.1:+86415677 | None:intergenic |
| GATGAAGAAAATGATGAAGA+AGG | 0.469568 | 7.1:+86418559 | None:intergenic |
| TATCTTGGACTTGGCAGGGA+TGG | 0.469596 | 7.1:-86415707 | MS.gene94408:CDS |
| TTGTTCACGTTTCTTGTCAT+CGG | 0.470010 | 7.1:-86418518 | MS.gene94408:CDS |
| CTATCACACATTCTTTCTGT+TGG | 0.475825 | 7.1:-86415569 | MS.gene94408:CDS |
| CTTATACCATTTGGAACAAA+CGG | 0.475959 | 7.1:+86416498 | None:intergenic |
| CTTACAACAGCACTCCTTGT+TGG | 0.477977 | 7.1:-86415843 | MS.gene94408:CDS |
| AACAATAGTTTCGTCTGCAG+TGG | 0.482915 | 7.1:+86413524 | None:intergenic |
| AACGAAGATACCGGCACCGA+TGG | 0.483739 | 7.1:+86418378 | None:intergenic |
| CGTGGTCTTTCCCGTCGGCT+TGG | 0.487553 | 7.1:-86418436 | MS.gene94408:CDS |
| GATAACATTCCAAAATGGAT+TGG | 0.488211 | 7.1:-86416819 | MS.gene94408:CDS |
| CATGTGTTGTTGTACTTCGC+TGG | 0.488780 | 7.1:-86414687 | MS.gene94408:CDS |
| GTGTTGCCAGCATTATGGCT+GGG | 0.490837 | 7.1:-86415610 | MS.gene94408:CDS |
| TCTTGCTCTTCATTTCCGCC+AGG | 0.496565 | 7.1:-86414503 | MS.gene94408:intron |
| TCTTCTCCTAGAAGACTGTA+TGG | 0.498213 | 7.1:+86415945 | None:intergenic |
| TACAGTTACATCATGAAGCA+TGG | 0.501501 | 7.1:-86413617 | MS.gene94408:intron |
| GATTTAAAAGCTTCAGCCAA+AGG | 0.508670 | 7.1:+86415918 | None:intergenic |
| ACAATAGTTTCGTCTGCAGT+GGG | 0.509979 | 7.1:+86413525 | None:intergenic |
| GTTTATGCAGCGGATTCAGT+AGG | 0.512220 | 7.1:-86413802 | MS.gene94408:CDS |
| GAGAGATGACGCGTTTGGAT+CGG | 0.514161 | 7.1:+86418491 | None:intergenic |
| CATTCTTTCTGTTGGTACGC+TGG | 0.514365 | 7.1:-86415561 | MS.gene94408:intron |
| TAACATGTTCTTATTTGGCC+AGG | 0.516841 | 7.1:-86413731 | MS.gene94408:intron |
| TACGCTCCTCCAACAACAGC+AGG | 0.517835 | 7.1:+86416990 | None:intergenic |
| TCGCGAGCTGTCTTCTCTGA+TGG | 0.520362 | 7.1:+86418469 | None:intergenic |
| CTTGGAATCGGAGCTTCCAT+CGG | 0.527576 | 7.1:-86418394 | MS.gene94408:CDS |
| CCGACGGGAAAGACCACGTC+CGG | 0.528346 | 7.1:+86418441 | None:intergenic |
| AGGCATAATTGGAAGCCTCT+TGG | 0.530309 | 7.1:-86416018 | MS.gene94408:CDS |
| ATCGGAGCTTCCATCGGTGC+CGG | 0.531766 | 7.1:-86418388 | MS.gene94408:CDS |
| TCTCGGCTATATCTTGGACT+TGG | 0.534605 | 7.1:-86415716 | MS.gene94408:CDS |
| TTTGGTACAATAGGAACTCC+AGG | 0.535491 | 7.1:+86413769 | None:intergenic |
| ATTCTAAGCATTCTTATGGT+CGG | 0.538022 | 7.1:-86413582 | MS.gene94408:CDS |
| TACAGTAGCTCCTGTAAAGA+CGG | 0.545158 | 7.1:+86416473 | None:intergenic |
| CTTGCTATAGTTGTTGCAGT+CGG | 0.547457 | 7.1:-86414532 | MS.gene94408:CDS |
| AACGTCATGAGCAACGGTGC+CGG | 0.551795 | 7.1:+86418351 | None:intergenic |
| TGTTGTTGTACTTCGCTGGA+AGG | 0.552915 | 7.1:-86414683 | MS.gene94408:CDS |
| TATTAGTAGAATCGGAGCTA+AGG | 0.553069 | 7.1:+86416758 | None:intergenic |
| ATTGTACATTGGAGTATGCT+TGG | 0.554345 | 7.1:-86415985 | MS.gene94408:CDS |
| AAGCAGCCCAGCCATAATGC+TGG | 0.555365 | 7.1:+86415604 | None:intergenic |
| TGCTGTTTCTGGATTTGCTG+CGG | 0.556606 | 7.1:-86414596 | MS.gene94408:CDS |
| TTTATGCAGCGGATTCAGTA+GGG | 0.557373 | 7.1:-86413801 | MS.gene94408:CDS |
| CCCAAATCTGAGAATGAAGA+GGG | 0.557797 | 7.1:+86415639 | None:intergenic |
| CCGGACGTGGTCTTTCCCGT+CGG | 0.560819 | 7.1:-86418441 | MS.gene94408:CDS |
| AGATAATTGATGTTTCATAA+CGG | 0.563069 | 7.1:+86414563 | None:intergenic |
| TCTTGGTGTTAGAGAATCAT+CGG | 0.563890 | 7.1:-86416715 | MS.gene94408:CDS |
| GCCGGTAACAACGAAGATAC+CGG | 0.564677 | 7.1:+86418369 | None:intergenic |
| ACAGTTACATCATGAAGCAT+GGG | 0.565510 | 7.1:-86413616 | MS.gene94408:intron |
| ATTGAATTGATAACTCATTG+AGG | 0.574290 | 7.1:+86413477 | None:intergenic |
| GTCAAAGACACCAAGCCGAC+GGG | 0.574354 | 7.1:+86418426 | None:intergenic |
| GTATGTATTGCATTGTACAT+TGG | 0.579606 | 7.1:-86415996 | MS.gene94408:CDS |
| ATGCTTGGTGATTACTGGAA+TGG | 0.581981 | 7.1:-86415970 | MS.gene94408:CDS |
| GTTGCTCATGACGTTGGACC+TGG | 0.582954 | 7.1:-86418343 | MS.gene94408:intron |
| AGTATCTTCAGCTAAGCGGC+GGG | 0.590169 | 7.1:-86414644 | MS.gene94408:CDS |
| GTGAACTTTAGCAAATATTG+CGG | 0.592167 | 7.1:+86415676 | None:intergenic |
| TGCTCTCTAGGTTTATGCAG+CGG | 0.593099 | 7.1:-86413812 | MS.gene94408:intron |
| TGAAGAATCTAAGAAGCCAC+AGG | 0.593382 | 7.1:-86416406 | MS.gene94408:intron |
| GCTATATCTTGGACTTGGCA+GGG | 0.593905 | 7.1:-86415711 | MS.gene94408:CDS |
| TTCGTTCATGACAGTGACCA+AGG | 0.597319 | 7.1:-86416685 | MS.gene94408:intron |
| TCTTCAGCTAAGCGGCGGGA+AGG | 0.597566 | 7.1:-86414640 | MS.gene94408:CDS |
| TGGAACAAACGGAGACCAGT+TGG | 0.600173 | 7.1:+86416509 | None:intergenic |
| TCTGAGAATGAAGAGGGGTG+TGG | 0.600264 | 7.1:+86415645 | None:intergenic |
| GGTCAAAGACACCAAGCCGA+CGG | 0.603693 | 7.1:+86418425 | None:intergenic |
| ACAGTAGCTCCTGTAAAGAC+GGG | 0.606123 | 7.1:+86416474 | None:intergenic |
| GAATTGATAACTCATTGAGG+TGG | 0.607223 | 7.1:+86413480 | None:intergenic |
| GGCACCGTTGCTCATGACGT+TGG | 0.607562 | 7.1:-86418349 | MS.gene94408:CDS |
| AGAATTGCTACGAATTCCCA+TGG | 0.612552 | 7.1:+86418582 | None:intergenic |
| AATGCTTGACTATCATATTG+GGG | 0.616231 | 7.1:-86416910 | MS.gene94408:CDS |
| TGTTTATCATGAAGCTCCAG+AGG | 0.619676 | 7.1:-86413505 | MS.gene94408:CDS |
| GAATGTTATCTTTGAAAACA+GGG | 0.627722 | 7.1:+86416832 | None:intergenic |
| ACCCAAATCTGAGAATGAAG+AGG | 0.633728 | 7.1:+86415638 | None:intergenic |
| AAGTATCTTCAGCTAAGCGG+CGG | 0.636037 | 7.1:-86414645 | MS.gene94408:CDS |
| AGGTCCAACGTCATGAGCAA+CGG | 0.636276 | 7.1:+86418345 | None:intergenic |
| ATTCCAAAATGGATTGGACA+TGG | 0.639496 | 7.1:-86416813 | MS.gene94408:CDS |
| GCTCGCGATAATTCCGGACG+TGG | 0.641843 | 7.1:-86418454 | MS.gene94408:CDS |
| CAGAAACAGCAACAGCAATG+AGG | 0.643820 | 7.1:+86414608 | None:intergenic |
| GTTGTTGTACTTCGCTGGAA+GGG | 0.646755 | 7.1:-86414682 | MS.gene94408:CDS |
| ACAGAGTGCATTTATAACAC+AGG | 0.665366 | 7.1:+86417037 | None:intergenic |
| ATTGGACATGGTCTAGACAT+CGG | 0.667606 | 7.1:-86416801 | MS.gene94408:CDS |
| TTGGTACAATAGGAACTCCA+GGG | 0.688639 | 7.1:+86413770 | None:intergenic |
| ACAATGCAATACATACCAAG+AGG | 0.689157 | 7.1:+86416003 | None:intergenic |
| TCGAAGTATCTTCAGCTAAG+CGG | 0.713382 | 7.1:-86414648 | MS.gene94408:CDS |
| CCTGAACATAGAGACCAACA+AGG | 0.716194 | 7.1:+86415829 | None:intergenic |
| CCAAATCTGAGAATGAAGAG+GGG | 0.734973 | 7.1:+86415640 | None:intergenic |
| CAATAGTTTCGTCTGCAGTG+GGG | 0.739028 | 7.1:+86413526 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCAAATCAAAATATTT+AGG | + | chr7.1:86418007-86418026 | None:intergenic | 10.0% |
| !! | TATCATTTATCTATTTATTA+TGG | - | chr7.1:86414764-86414783 | MS.gene94408:intron | 10.0% |
| !!! | TAAAATATATGGTATTATTT+TGG | + | chr7.1:86418399-86418418 | None:intergenic | 10.0% |
| !!! | TATTTATTTATATTTGAAAC+CGG | - | chr7.1:86413869-86413888 | MS.gene94408:intron | 10.0% |
| !!! | TATTTTGATTTGATTTAATA+TGG | - | chr7.1:86418010-86418029 | MS.gene94408:intron | 10.0% |
| !!! | AAAATATAAGTATTTCTAAC+CGG | + | chr7.1:86416898-86416917 | None:intergenic | 15.0% |
| !!! | ATAAGTTGTTTTTGATTATT+GGG | - | chr7.1:86414036-86414055 | MS.gene94408:intron | 15.0% |
| !!! | ATATTTTTTGACATGATTAT+AGG | - | chr7.1:86416911-86416930 | MS.gene94408:CDS | 15.0% |
| !!! | CTTTTATTTTTATTTAACAC+CGG | + | chr7.1:86413786-86413805 | None:intergenic | 15.0% |
| !!! | TATAAGTTGTTTTTGATTAT+TGG | - | chr7.1:86414035-86414054 | MS.gene94408:intron | 15.0% |
| !!! | TATTTTTTGACATGATTATA+GGG | - | chr7.1:86416912-86416931 | MS.gene94408:CDS | 15.0% |
| !!! | TTTATCAATTTTGAAGTATT+TGG | + | chr7.1:86416623-86416642 | None:intergenic | 15.0% |
| !! | AATAAGCTGAAAATAGTTTA+TGG | - | chr7.1:86414268-86414287 | MS.gene94408:intron | 20.0% |
| !! | AATATCATAAAATTGTCTGT+TGG | - | chr7.1:86417774-86417793 | MS.gene94408:intron | 20.0% |
| !! | ACTTGGATAAACAAAATTAA+TGG | - | chr7.1:86414111-86414130 | MS.gene94408:intron | 20.0% |
| !! | AGAAGTAAATAGTAGATATT+CGG | - | chr7.1:86415872-86415891 | MS.gene94408:CDS | 20.0% |
| !! | AGATAATTGATGTTTCATAA+CGG | + | chr7.1:86417511-86417530 | None:intergenic | 20.0% |
| !! | ATTAGAAATATCATTGTGTT+TGG | - | chr7.1:86417068-86417087 | MS.gene94408:CDS | 20.0% |
| !! | ATTATAGGGAAAAAATACTT+TGG | - | chr7.1:86416926-86416945 | MS.gene94408:CDS | 20.0% |
| !! | ATTCAATCTTGTCATTATAA+AGG | - | chr7.1:86417745-86417764 | MS.gene94408:intron | 20.0% |
| !! | CTGAAATAAGTAAAAATATC+AGG | + | chr7.1:86417342-86417361 | None:intergenic | 20.0% |
| !! | TACAAATATCTCTCTATTTA+AGG | + | chr7.1:86414386-86414405 | None:intergenic | 20.0% |
| !! | TCAAACATAATTGATGTATT+TGG | - | chr7.1:86413806-86413825 | MS.gene94408:intron | 20.0% |
| !! | TCTTATGTAATAAAAAACGA+AGG | - | chr7.1:86417980-86417999 | MS.gene94408:intron | 20.0% |
| !! | TTAGAAAATTCATAAAGCAT+TGG | + | chr7.1:86415711-86415730 | None:intergenic | 20.0% |
| !! | TTAGAAATATCATTGTGTTT+GGG | - | chr7.1:86417069-86417088 | MS.gene94408:CDS | 20.0% |
| !! | TTATAGGGAAAAAATACTTT+GGG | - | chr7.1:86416927-86416946 | MS.gene94408:CDS | 20.0% |
| !! | TTATGGTATCTTAGTTATAT+TGG | - | chr7.1:86414781-86414800 | MS.gene94408:intron | 20.0% |
| !! | TTCTTTAACATGTTCTTATT+TGG | - | chr7.1:86418335-86418354 | MS.gene94408:intron | 20.0% |
| !!! | ACATTAAGTTTTATATTTGC+TGG | - | chr7.1:86415006-86415025 | MS.gene94408:intron | 20.0% |
| !!! | AGTCAAAACTTCTTTTAAAT+AGG | - | chr7.1:86416828-86416847 | MS.gene94408:CDS | 20.0% |
| !!! | ATAATACCATATATTTTACG+AGG | - | chr7.1:86418401-86418420 | MS.gene94408:CDS | 20.0% |
| !!! | ATATTGAATTTTCTTCAGTA+AGG | - | chr7.1:86414511-86414530 | MS.gene94408:CDS | 20.0% |
| !!! | CTATTTTCTCAAATTATTAC+CGG | + | chr7.1:86414636-86414655 | None:intergenic | 20.0% |
| !!! | TAGTTATTTTGGAGATTTTA+TGG | - | chr7.1:86413980-86413999 | MS.gene94408:intron | 20.0% |
| !!! | TATTGAATTTTCTTCAGTAA+GGG | - | chr7.1:86414512-86414531 | MS.gene94408:CDS | 20.0% |
| !!! | TATTTTTACTTATTTCAGAC+TGG | - | chr7.1:86417344-86417363 | MS.gene94408:intron | 20.0% |
| ! | AAAATTTCAAAACGAAGAGA+TGG | + | chr7.1:86418374-86418393 | None:intergenic | 25.0% |
| ! | AATCTTGTCATTATAAAGGA+GGG | - | chr7.1:86417749-86417768 | MS.gene94408:intron | 25.0% |
| ! | ACTAATGCAAACTTAACTAA+AGG | + | chr7.1:86414725-86414744 | None:intergenic | 25.0% |
| ! | AGCGTATCTATATACATATA+CGG | - | chr7.1:86415098-86415117 | MS.gene94408:intron | 25.0% |
| ! | ATAAGTAAAAATATCAGGTG+TGG | + | chr7.1:86417337-86417356 | None:intergenic | 25.0% |
| ! | ATAGGACATCAATTATTTAC+AGG | + | chr7.1:86417683-86417702 | None:intergenic | 25.0% |
| ! | ATCAACATCGAAATTCAAAA+TGG | + | chr7.1:86418205-86418224 | None:intergenic | 25.0% |
| ! | CTTTAACCTCGTAAAATATA+TGG | + | chr7.1:86418410-86418429 | None:intergenic | 25.0% |
| ! | GCTTATGCCTTATATAAAAA+CGG | + | chr7.1:86414215-86414234 | None:intergenic | 25.0% |
| ! | GTAGATAAGCTCAATTATTA+AGG | - | chr7.1:86414084-86414103 | MS.gene94408:intron | 25.0% |
| ! | GTTAAATACTTTAGGTAAGA+TGG | + | chr7.1:86415419-86415438 | None:intergenic | 25.0% |
| ! | TAAAAAAAATAACACTGACC+TGG | + | chr7.1:86417589-86417608 | None:intergenic | 25.0% |
| ! | TAAACATGGTTAGATTCTAT+TGG | + | chr7.1:86417213-86417232 | None:intergenic | 25.0% |
| ! | TAAGTAAAAATATCAGGTGT+GGG | + | chr7.1:86417336-86417355 | None:intergenic | 25.0% |
| ! | TAATGCTTGACTATCATATT+GGG | - | chr7.1:86415160-86415179 | MS.gene94408:intron | 25.0% |
| ! | TATCTTATACAAGCTCAAAA+TGG | - | chr7.1:86414419-86414438 | MS.gene94408:intron | 25.0% |
| ! | TCAAAGATAACATTCCAAAA+TGG | - | chr7.1:86415247-86415266 | MS.gene94408:intron | 25.0% |
| ! | TCAAATAAGCTAATCCAAAT+AGG | - | chr7.1:86414360-86414379 | MS.gene94408:intron | 25.0% |
| ! | TGAGCTGAAAATAGTTTATA+TGG | - | chr7.1:86414006-86414025 | MS.gene94408:intron | 25.0% |
| ! | TGATTTCTAACATGACAATT+TGG | + | chr7.1:86417648-86417667 | None:intergenic | 25.0% |
| ! | TGCTCAATGTTAAATACTTT+AGG | + | chr7.1:86415427-86415446 | None:intergenic | 25.0% |
| ! | TGTGTGTATTTGTTTGTATT+CGG | - | chr7.1:86417092-86417111 | MS.gene94408:intron | 25.0% |
| ! | TTAAAGAAGATGCAAACATT+TGG | + | chr7.1:86418323-86418342 | None:intergenic | 25.0% |
| ! | TTAATGCTTGACTATCATAT+TGG | - | chr7.1:86415159-86415178 | MS.gene94408:intron | 25.0% |
| ! | TTGTGAAAAAACAAGAAAAG+CGG | + | chr7.1:86415139-86415158 | None:intergenic | 25.0% |
| !! | AAAGTATCAACAATAGACTT+TGG | + | chr7.1:86415837-86415856 | None:intergenic | 25.0% |
| !! | AATTGATAATTGAGTTACTC+CGG | + | chr7.1:86413891-86413910 | None:intergenic | 25.0% |
| !! | ATGTGGTATTATTTGCTAAA+TGG | + | chr7.1:86417249-86417268 | None:intergenic | 25.0% |
| !! | CAACATGATTTTTGTTCAAT+TGG | + | chr7.1:86417873-86417892 | None:intergenic | 25.0% |
| !! | GAATGTTATCTTTGAAAACA+GGG | + | chr7.1:86415242-86415261 | None:intergenic | 25.0% |
| !! | GTTGTTCACTTTAGTTATTT+TGG | - | chr7.1:86413969-86413988 | MS.gene94408:intron | 25.0% |
| !! | TTTTTATCATTTTGCTCTCT+AGG | - | chr7.1:86418247-86418266 | MS.gene94408:intron | 25.0% |
| !!! | AAAGGTAAAGCTTTTTAGTA+TGG | + | chr7.1:86416764-86416783 | None:intergenic | 25.0% |
| !!! | AGTTAGACCGTTTTTATATA+AGG | - | chr7.1:86414205-86414224 | MS.gene94408:intron | 25.0% |
| !!! | GTTATTTTTGACATTTCAGA+GGG | - | chr7.1:86416020-86416039 | MS.gene94408:CDS | 25.0% |
| !!! | TGTTATTTTTGACATTTCAG+AGG | - | chr7.1:86416019-86416038 | MS.gene94408:CDS | 25.0% |
| AAATTGTGATCATTACCTGT+TGG | - | chr7.1:86417023-86417042 | MS.gene94408:CDS | 30.0% | |
| AAGCTATTCTAGTGAGATTA+TGG | - | chr7.1:86414244-86414263 | MS.gene94408:intron | 30.0% | |
| AAGTATCCATGTTCTATACA+AGG | - | chr7.1:86416641-86416660 | MS.gene94408:intron | 30.0% | |
| AATGCTTGACTATCATATTG+GGG | - | chr7.1:86415161-86415180 | MS.gene94408:intron | 30.0% | |
| ACAATAGTGGCTTAAAATCA+TGG | - | chr7.1:86416701-86416720 | MS.gene94408:CDS | 30.0% | |
| ACCTTGTCAAAGAACAAAAT+AGG | + | chr7.1:86417701-86417720 | None:intergenic | 30.0% | |
| ATACACATAGATACTCATAC+CGG | - | chr7.1:86414614-86414633 | MS.gene94408:CDS | 30.0% | |
| ATACTTTAGGTAAGATGGAA+AGG | + | chr7.1:86415414-86415433 | None:intergenic | 30.0% | |
| ATATCAAGACAATAAACCTG+TGG | + | chr7.1:86415684-86415703 | None:intergenic | 30.0% | |
| ATCAATTATTTACAGGTCAG+TGG | + | chr7.1:86417676-86417695 | None:intergenic | 30.0% | |
| ATGCAAACATTTGGTACAAT+AGG | + | chr7.1:86418314-86418333 | None:intergenic | 30.0% | |
| ATTCTAAGCATTCTTATGGT+CGG | - | chr7.1:86418489-86418508 | MS.gene94408:CDS | 30.0% | |
| CAATCTTGTCATTATAAAGG+AGG | - | chr7.1:86417748-86417767 | MS.gene94408:intron | 30.0% | |
| CACATGCTCATTATTGAAAA+AGG | + | chr7.1:86416782-86416801 | None:intergenic | 30.0% | |
| CTAACCATGTTTAATGCATT+CGG | - | chr7.1:86417220-86417239 | MS.gene94408:intron | 30.0% | |
| GATAACATTCCAAAATGGAT+TGG | - | chr7.1:86415252-86415271 | MS.gene94408:intron | 30.0% | |
| GATGAAGAAAATGATGAAGA+AGG | + | chr7.1:86413515-86413534 | None:intergenic | 30.0% | |
| GTATGTATTGCATTGTACAT+TGG | - | chr7.1:86416075-86416094 | MS.gene94408:intron | 30.0% | |
| GTGAACTTTAGCAAATATTG+CGG | + | chr7.1:86416398-86416417 | None:intergenic | 30.0% | |
| GTGTGTATTTGTTTGTATTC+GGG | - | chr7.1:86417093-86417112 | MS.gene94408:intron | 30.0% | |
| GTTCTTCAGTATAAACAGTT+AGG | - | chr7.1:86414448-86414467 | MS.gene94408:intron | 30.0% | |
| GTTTCTATTCTGATTAGCAT+TGG | - | chr7.1:86416192-86416211 | MS.gene94408:intron | 30.0% | |
| TAGAAATGACATATACGACA+TGG | - | chr7.1:86414561-86414580 | MS.gene94408:CDS | 30.0% | |
| TCAATTATTAAGGCTCTACT+TGG | - | chr7.1:86414094-86414113 | MS.gene94408:intron | 30.0% | |
| TCATAAAATTGTCTGTTGGT+TGG | - | chr7.1:86417778-86417797 | MS.gene94408:intron | 30.0% | |
| TGAAAAATTCTTAGCATACC+AGG | + | chr7.1:86413749-86413768 | None:intergenic | 30.0% | |
| TGAACTTTAGCAAATATTGC+GGG | + | chr7.1:86416397-86416416 | None:intergenic | 30.0% | |
| TGATATATAACCATACCAAC+AGG | + | chr7.1:86417041-86417060 | None:intergenic | 30.0% | |
| TGCTTATTTACATACATGAC+AGG | - | chr7.1:86416311-86416330 | MS.gene94408:intron | 30.0% | |
| TGGTATCTTAGTTATATTGG+AGG | - | chr7.1:86414784-86414803 | MS.gene94408:intron | 30.0% | |
| TGTGATTCTAAGCATTCTTA+TGG | - | chr7.1:86418485-86418504 | MS.gene94408:CDS | 30.0% | |
| TGTTATAGTTCCAAACTTTG+TGG | - | chr7.1:86414950-86414969 | MS.gene94408:intron | 30.0% | |
| TTTCAATTTATTTACCGCTC+CGG | - | chr7.1:86413764-86413783 | MS.gene94408:CDS | 30.0% | |
| ! | AACACATGCACACTTTTAAT+AGG | + | chr7.1:86416976-86416995 | None:intergenic | 30.0% |
| ! | ATGTCGTATATGTCATTTCT+AGG | + | chr7.1:86414562-86414581 | None:intergenic | 30.0% |
| ! | CTTATACCATTTGGAACAAA+CGG | + | chr7.1:86415576-86415595 | None:intergenic | 30.0% |
| ! | GCTGAAGCTTTTAAATCTAA+GGG | - | chr7.1:86416159-86416178 | MS.gene94408:intron | 30.0% |
| ! | GGAATGTTATCTTTGAAAAC+AGG | + | chr7.1:86415243-86415262 | None:intergenic | 30.0% |
| ! | TCCTATTTTGTTCTTTGACA+AGG | - | chr7.1:86417697-86417716 | MS.gene94408:intron | 30.0% |
| ! | TGTCGTATATGTCATTTCTA+GGG | + | chr7.1:86414561-86414580 | None:intergenic | 30.0% |
| !! | AGAATCGATTTCTAAGATCA+TGG | - | chr7.1:86416535-86416554 | MS.gene94408:CDS | 30.0% |
| !! | ATTTTTATTTAACACCGGAG+CGG | + | chr7.1:86413781-86413800 | None:intergenic | 30.0% |
| !! | CTGCTTTAAGATAATGATCA+TGG | - | chr7.1:86414907-86414926 | MS.gene94408:intron | 30.0% |
| !! | GTGAGAAGTATTAGTAGAAT+CGG | + | chr7.1:86415324-86415343 | None:intergenic | 30.0% |
| AAAAAATAACACTGACCTGG+CGG | + | chr7.1:86417586-86417605 | None:intergenic | 35.0% | |
| ACAATGCAATACATACCAAG+AGG | + | chr7.1:86416071-86416090 | None:intergenic | 35.0% | |
| ACAGAGTGCATTTATAACAC+AGG | + | chr7.1:86415037-86415056 | None:intergenic | 35.0% | |
| ACAGTTACATCATGAAGCAT+GGG | - | chr7.1:86418455-86418474 | MS.gene94408:CDS | 35.0% | |
| AGCATGTGCGAGATAAAAAT+TGG | - | chr7.1:86416794-86416813 | MS.gene94408:CDS | 35.0% | |
| AGTTATATTGGAGGATGTGT+AGG | - | chr7.1:86414793-86414812 | MS.gene94408:intron | 35.0% | |
| AGTTGGACTATTAGATTCAC+AGG | + | chr7.1:86415931-86415950 | None:intergenic | 35.0% | |
| ATTGTACATTGGAGTATGCT+TGG | - | chr7.1:86416086-86416105 | MS.gene94408:intron | 35.0% | |
| ATTTCAAAACGAAGAGATGG+TGG | + | chr7.1:86418371-86418390 | None:intergenic | 35.0% | |
| CATGTTCTATACAAGGTTGT+GGG | - | chr7.1:86416648-86416667 | MS.gene94408:intron | 35.0% | |
| CTATCACACATTCTTTCTGT+TGG | - | chr7.1:86416502-86416521 | MS.gene94408:CDS | 35.0% | |
| CTCACTATAATTCTCTGTCT+TGG | - | chr7.1:86415339-86415358 | MS.gene94408:intron | 35.0% | |
| CTTAGATTCTTCAGCAGAAT+TGG | + | chr7.1:86415658-86415677 | None:intergenic | 35.0% | |
| GACCTTATACTTCTTGGAAT+CGG | - | chr7.1:86413665-86413684 | MS.gene94408:intron | 35.0% | |
| GATTTAAAAGCTTCAGCCAA+AGG | + | chr7.1:86416156-86416175 | None:intergenic | 35.0% | |
| GATTTGCCAATAGGCATAAT+TGG | - | chr7.1:86416042-86416061 | MS.gene94408:intron | 35.0% | |
| GGGAAAAAATACTTTGGGTA+TGG | - | chr7.1:86416932-86416951 | MS.gene94408:CDS | 35.0% | |
| GGTATGAGTATCTATGTGTA+TGG | + | chr7.1:86414615-86414634 | None:intergenic | 35.0% | |
| GTCTTTGACCTTATACTTCT+TGG | - | chr7.1:86413659-86413678 | MS.gene94408:intron | 35.0% | |
| GTTATTGTTGTCATCTTTGC+TGG | - | chr7.1:86415519-86415538 | MS.gene94408:intron | 35.0% | |
| TAATGATCATGGACATGTGA+TGG | - | chr7.1:86414918-86414937 | MS.gene94408:intron | 35.0% | |
| TACAGTTACATCATGAAGCA+TGG | - | chr7.1:86418454-86418473 | MS.gene94408:CDS | 35.0% | |
| TATTAGTAGAATCGGAGCTA+AGG | + | chr7.1:86415316-86415335 | None:intergenic | 35.0% | |
| TCTTATATCCGTATTGTACC+CGG | - | chr7.1:86417145-86417164 | MS.gene94408:intron | 35.0% | |
| TTAAGCCACTATTGTCAAGT+GGG | + | chr7.1:86416696-86416715 | None:intergenic | 35.0% | |
| TTCAGAATACATCTCACAAC+AGG | - | chr7.1:86418036-86418055 | MS.gene94408:intron | 35.0% | |
| TTGTTCACGTTTCTTGTCAT+CGG | - | chr7.1:86413553-86413572 | MS.gene94408:CDS | 35.0% | |
| TTTAAGCCACTATTGTCAAG+TGG | + | chr7.1:86416697-86416716 | None:intergenic | 35.0% | |
| ! | AACTTAACTAAAGGCGTGTT+TGG | + | chr7.1:86414716-86414735 | None:intergenic | 35.0% |
| ! | CTCTCTATTTAAGGCCTATT+TGG | + | chr7.1:86414377-86414396 | None:intergenic | 35.0% |
| ! | GAGAAGAAGATTAAGTACTG+AGG | - | chr7.1:86418109-86418128 | MS.gene94408:intron | 35.0% |
| ! | GGCTGAAGCTTTTAAATCTA+AGG | - | chr7.1:86416158-86416177 | MS.gene94408:intron | 35.0% |
| ! | TAACATGTTCTTATTTGGCC+AGG | - | chr7.1:86418340-86418359 | MS.gene94408:intron | 35.0% |
| ! | TAGGGTATCAACTCAAATAC+TGG | + | chr7.1:86414543-86414562 | None:intergenic | 35.0% |
| !! | ATTCCAAAATGGATTGGACA+TGG | - | chr7.1:86415258-86415277 | MS.gene94408:intron | 35.0% |
| !! | TCTTGGTGTTAGAGAATCAT+CGG | - | chr7.1:86415356-86415375 | MS.gene94408:intron | 35.0% |
| !! | TTAAGTACTGAGGTTATCTC+AGG | - | chr7.1:86418119-86418138 | MS.gene94408:intron | 35.0% |
| AACAATAGTTTCGTCTGCAG+TGG | + | chr7.1:86418550-86418569 | None:intergenic | 40.0% | |
| AATGTCGCAAAAAGCAACGT+TGG | + | chr7.1:86416855-86416874 | None:intergenic | 40.0% | |
| ACAATAGTTTCGTCTGCAGT+GGG | + | chr7.1:86418549-86418568 | None:intergenic | 40.0% | |
| ACCCAAATCTGAGAATGAAG+AGG | + | chr7.1:86416436-86416455 | None:intergenic | 40.0% | |
| AGGCTTCCAATTATGCCTAT+TGG | + | chr7.1:86416051-86416070 | None:intergenic | 40.0% | |
| ATGGTTCCATACAGTCTTCT+AGG | - | chr7.1:86416120-86416139 | MS.gene94408:intron | 40.0% | |
| ATTGGACATGGTCTAGACAT+CGG | - | chr7.1:86415270-86415289 | MS.gene94408:intron | 40.0% | |
| CAACAATAGACTTTGGCATC+TGG | + | chr7.1:86415830-86415849 | None:intergenic | 40.0% | |
| CCAAACTTTGTGGCTTATTC+TGG | - | chr7.1:86414960-86414979 | MS.gene94408:intron | 40.0% | |
| CCAAATCTGAGAATGAAGAG+GGG | + | chr7.1:86416434-86416453 | None:intergenic | 40.0% | |
| CCACAACCTTGTATAGAACA+TGG | + | chr7.1:86416650-86416669 | None:intergenic | 40.0% | |
| CCAGAATAAGCCACAAAGTT+TGG | + | chr7.1:86414963-86414982 | None:intergenic | 40.0% | |
| CCATGTTCTATACAAGGTTG+TGG | - | chr7.1:86416647-86416666 | MS.gene94408:intron | 40.0% | |
| CCCAAATCTGAGAATGAAGA+GGG | + | chr7.1:86416435-86416454 | None:intergenic | 40.0% | |
| CCCTCTTCATTCTCAGATTT+GGG | - | chr7.1:86416432-86416451 | MS.gene94408:CDS | 40.0% | |
| CTTATATCCGTATTGTACCC+GGG | - | chr7.1:86417146-86417165 | MS.gene94408:intron | 40.0% | |
| CTTCATTCTCAGATTTGGGT+TGG | - | chr7.1:86416436-86416455 | MS.gene94408:CDS | 40.0% | |
| GACTCCGAATGCATTAAACA+TGG | + | chr7.1:86417227-86417246 | None:intergenic | 40.0% | |
| GGTTTCTTTCTGTAATGCAG+CGG | - | chr7.1:86414981-86415000 | MS.gene94408:intron | 40.0% | |
| GTAGTCTTCTTTGCGTATGT+TGG | - | chr7.1:86415618-86415637 | MS.gene94408:CDS | 40.0% | |
| GTCTCACAAGTGATTATGTC+AGG | - | chr7.1:86414329-86414348 | MS.gene94408:intron | 40.0% | |
| GTGATCATTACCTGTTGGTA+TGG | - | chr7.1:86417028-86417047 | MS.gene94408:CDS | 40.0% | |
| TACAGTAGCTCCTGTAAAGA+CGG | + | chr7.1:86415601-86415620 | None:intergenic | 40.0% | |
| TCTTCTCCTAGAAGACTGTA+TGG | + | chr7.1:86416129-86416148 | None:intergenic | 40.0% | |
| TGAAGAATCTAAGAAGCCAC+AGG | - | chr7.1:86415665-86415684 | MS.gene94408:CDS | 40.0% | |
| TGTAAATAAGCACATGCCTC+CGG | + | chr7.1:86416303-86416322 | None:intergenic | 40.0% | |
| TGTTTATCATGAAGCTCCAG+AGG | - | chr7.1:86418566-86418585 | MS.gene94408:CDS | 40.0% | |
| TTAGTCAAAGCACAGCAATG+TGG | + | chr7.1:86417266-86417285 | None:intergenic | 40.0% | |
| TTCTTTCTGATGAGCAGTCT+CGG | - | chr7.1:86416338-86416357 | MS.gene94408:intron | 40.0% | |
| TTGGTACAATAGGAACTCCA+GGG | + | chr7.1:86418304-86418323 | None:intergenic | 40.0% | |
| TTGTTACACGTCTGTTGAGT+TGG | + | chr7.1:86415948-86415967 | None:intergenic | 40.0% | |
| TTTCAGAGGGATTTGCCAAT+AGG | - | chr7.1:86416033-86416052 | MS.gene94408:CDS | 40.0% | |
| TTTGGTACAATAGGAACTCC+AGG | + | chr7.1:86418305-86418324 | None:intergenic | 40.0% | |
| ! | AAGACGGGTCTTATACCATT+TGG | + | chr7.1:86415585-86415604 | None:intergenic | 40.0% |
| ! | AGACCATGTCCAATCCATTT+TGG | + | chr7.1:86415264-86415283 | None:intergenic | 40.0% |
| ! | ATGCTTGGTGATTACTGGAA+TGG | - | chr7.1:86416101-86416120 | MS.gene94408:intron | 40.0% |
| ! | CTCCGATTCCAAGAAGTATA+AGG | + | chr7.1:86413670-86413689 | None:intergenic | 40.0% |
| ! | CTTGCTATAGTTGTTGCAGT+CGG | - | chr7.1:86417539-86417558 | MS.gene94408:intron | 40.0% |
| ! | TCGAAGTATCTTCAGCTAAG+CGG | - | chr7.1:86417423-86417442 | MS.gene94408:intron | 40.0% |
| ! | TTTATGCAGCGGATTCAGTA+GGG | - | chr7.1:86418270-86418289 | MS.gene94408:intron | 40.0% |
| ! | TTTTTGCGACATTCCGACAT+TGG | - | chr7.1:86416862-86416881 | MS.gene94408:CDS | 40.0% |
| !! | ATTAGCATTGGTGCTATTGC+TGG | - | chr7.1:86416204-86416223 | MS.gene94408:intron | 40.0% |
| !! | TTGAGGTTGATGTTTCCAAC+TGG | - | chr7.1:86415547-86415566 | MS.gene94408:intron | 40.0% |
| AAGACAGCTCGCGATAATTC+CGG | - | chr7.1:86413611-86413630 | MS.gene94408:CDS | 45.0% | |
| AAGTATCTTCAGCTAAGCGG+CGG | - | chr7.1:86417426-86417445 | MS.gene94408:intron | 45.0% | |
| AATGAAGCCCGGGTACAATA+CGG | + | chr7.1:86417156-86417175 | None:intergenic | 45.0% | |
| ACAAGGTTGTGGGACATTAG+TGG | - | chr7.1:86416658-86416677 | MS.gene94408:intron | 45.0% | |
| ACAGTAGCTCCTGTAAAGAC+GGG | + | chr7.1:86415600-86415619 | None:intergenic | 45.0% | |
| AGGCATAATTGGAAGCCTCT+TGG | - | chr7.1:86416053-86416072 | MS.gene94408:intron | 45.0% | |
| CAAGTGATCACTTCATGAGC+AGG | - | chr7.1:86418066-86418085 | MS.gene94408:intron | 45.0% | |
| CAATAGTTTCGTCTGCAGTG+GGG | + | chr7.1:86418548-86418567 | None:intergenic | 45.0% | |
| CAGAAACAGCAACAGCAATG+AGG | + | chr7.1:86417466-86417485 | None:intergenic | 45.0% | |
| CATGACCCACTTGACAATAG+TGG | - | chr7.1:86416688-86416707 | MS.gene94408:CDS | 45.0% | |
| CATTCTTTCTGTTGGTACGC+TGG | - | chr7.1:86416510-86416529 | MS.gene94408:CDS | 45.0% | |
| CCCCTCTTCATTCTCAGATT+TGG | - | chr7.1:86416431-86416450 | MS.gene94408:CDS | 45.0% | |
| CCTGAACATAGAGACCAACA+AGG | + | chr7.1:86416245-86416264 | None:intergenic | 45.0% | |
| CTTACAACAGCACTCCTTGT+TGG | - | chr7.1:86416228-86416247 | MS.gene94408:intron | 45.0% | |
| GCTATATCTTGGACTTGGCA+GGG | - | chr7.1:86416360-86416379 | MS.gene94408:intron | 45.0% | |
| GGAGGATGTGTAGGCTAAAA+GGG | - | chr7.1:86414802-86414821 | MS.gene94408:intron | 45.0% | |
| GGTAAGATGGAAAGGAACCT+TGG | + | chr7.1:86415406-86415425 | None:intergenic | 45.0% | |
| GGTATAAGACCCGTCTTTAC+AGG | - | chr7.1:86415588-86415607 | MS.gene94408:CDS | 45.0% | |
| GTCGGAGTTTACGCGATATA+TGG | - | chr7.1:86418507-86418526 | MS.gene94408:CDS | 45.0% | |
| GTTGTTGTACTTCGCTGGAA+GGG | - | chr7.1:86417389-86417408 | MS.gene94408:intron | 45.0% | |
| TCATCAGACAGAATGAAGCC+CGG | + | chr7.1:86417167-86417186 | None:intergenic | 45.0% | |
| TCTAGGAGAAGAAGCTCCTT+TGG | - | chr7.1:86416137-86416156 | MS.gene94408:intron | 45.0% | |
| TCTCGATTTCCTGCTGTTGT+TGG | - | chr7.1:86415072-86415091 | MS.gene94408:intron | 45.0% | |
| TCTCGGCTATATCTTGGACT+TGG | - | chr7.1:86416355-86416374 | MS.gene94408:intron | 45.0% | |
| TGAGCAGTGTGTTAATGCTG+CGG | - | chr7.1:86415441-86415460 | MS.gene94408:intron | 45.0% | |
| TGATCACTTCATGAGCAGGA+GGG | - | chr7.1:86418070-86418089 | MS.gene94408:intron | 45.0% | |
| TGCTCTCTAGGTTTATGCAG+CGG | - | chr7.1:86418259-86418278 | MS.gene94408:intron | 45.0% | |
| TGGAGGATGTGTAGGCTAAA+AGG | - | chr7.1:86414801-86414820 | MS.gene94408:intron | 45.0% | |
| TGGTCTCCGTTTGTTCCAAA+TGG | - | chr7.1:86415567-86415586 | MS.gene94408:CDS | 45.0% | |
| TGTTGTTGTACTTCGCTGGA+AGG | - | chr7.1:86417388-86417407 | MS.gene94408:intron | 45.0% | |
| TTCGTTCATGACAGTGACCA+AGG | - | chr7.1:86415386-86415405 | MS.gene94408:intron | 45.0% | |
| ! | AATACTGATTGATGTGCCGG+AGG | - | chr7.1:86416284-86416303 | MS.gene94408:intron | 45.0% |
| ! | CATCTTTGCTGGAGCTTTTG+AGG | - | chr7.1:86415530-86415549 | MS.gene94408:intron | 45.0% |
| ! | CATGTGTTGTTGTACTTCGC+TGG | - | chr7.1:86417384-86417403 | MS.gene94408:intron | 45.0% |
| ! | CCTTGTTGGTCTCTATGTTC+AGG | - | chr7.1:86416242-86416261 | MS.gene94408:intron | 45.0% |
| ! | CGCAATACTGATTGATGTGC+CGG | - | chr7.1:86416281-86416300 | MS.gene94408:intron | 45.0% |
| ! | GGAGTATGCTTGGTGATTAC+TGG | - | chr7.1:86416096-86416115 | MS.gene94408:intron | 45.0% |
| ! | GTTTATGCAGCGGATTCAGT+AGG | - | chr7.1:86418269-86418288 | MS.gene94408:intron | 45.0% |
| !! | AATCGGAGCTAAGGCATTGA+TGG | + | chr7.1:86415307-86415326 | None:intergenic | 45.0% |
| !! | CTCATTGCTGTTGCTGTTTC+TGG | - | chr7.1:86417464-86417483 | MS.gene94408:intron | 45.0% |
| ACTTCATGAGCAGGAGGGTA+CGG | - | chr7.1:86418075-86418094 | MS.gene94408:intron | 50.0% | |
| AGGTCCAACGTCATGAGCAA+CGG | + | chr7.1:86413729-86413748 | None:intergenic | 50.0% | |
| AGTATCTTCAGCTAAGCGGC+GGG | - | chr7.1:86417427-86417446 | MS.gene94408:intron | 50.0% | |
| CATCAGACAGAATGAAGCCC+GGG | + | chr7.1:86417166-86417185 | None:intergenic | 50.0% | |
| CGATTTCCTGCTGTTGTTGG+AGG | - | chr7.1:86415075-86415094 | MS.gene94408:intron | 50.0% | |
| CGGACTAACCCTACCAATGT+CGG | + | chr7.1:86416878-86416897 | None:intergenic | 50.0% | |
| CTTGGAATCGGAGCTTCCAT+CGG | - | chr7.1:86413677-86413696 | MS.gene94408:intron | 50.0% | |
| GAGAGATGACGCGTTTGGAT+CGG | + | chr7.1:86413583-86413602 | None:intergenic | 50.0% | |
| GAGCAGTCTCGGCTATATCT+TGG | - | chr7.1:86416349-86416368 | MS.gene94408:intron | 50.0% | |
| GCCGGTAACAACGAAGATAC+CGG | + | chr7.1:86413705-86413724 | None:intergenic | 50.0% | |
| GCCGGTATCTTCGTTGTTAC+CGG | - | chr7.1:86413701-86413720 | MS.gene94408:intron | 50.0% | |
| GCGACATTCCGACATTGGTA+GGG | - | chr7.1:86416867-86416886 | MS.gene94408:CDS | 50.0% | |
| GGCTATATCTTGGACTTGGC+AGG | - | chr7.1:86416359-86416378 | MS.gene94408:intron | 50.0% | |
| GTGATCACTTCATGAGCAGG+AGG | - | chr7.1:86418069-86418088 | MS.gene94408:intron | 50.0% | |
| GTGTTGCCAGCATTATGGCT+GGG | - | chr7.1:86416461-86416480 | MS.gene94408:CDS | 50.0% | |
| TATCTTGGACTTGGCAGGGA+TGG | - | chr7.1:86416364-86416383 | MS.gene94408:intron | 50.0% | |
| TCTGAGAATGAAGAGGGGTG+TGG | + | chr7.1:86416429-86416448 | None:intergenic | 50.0% | |
| TCTTGCTCTTCATTTCCGCC+AGG | - | chr7.1:86417568-86417587 | MS.gene94408:intron | 50.0% | |
| TGATGGAGAGATGACGCGTT+TGG | + | chr7.1:86413588-86413607 | None:intergenic | 50.0% | |
| TGCGACATTCCGACATTGGT+AGG | - | chr7.1:86416866-86416885 | MS.gene94408:CDS | 50.0% | |
| TGGAACAAACGGAGACCAGT+TGG | + | chr7.1:86415565-86415584 | None:intergenic | 50.0% | |
| TGGCTGTGTTGCCAGCATTA+TGG | - | chr7.1:86416456-86416475 | MS.gene94408:CDS | 50.0% | |
| TGTGTTGCCAGCATTATGGC+TGG | - | chr7.1:86416460-86416479 | MS.gene94408:CDS | 50.0% | |
| ! | TCAGTAGGGTTTTCTTGCCC+TGG | - | chr7.1:86418284-86418303 | MS.gene94408:intron | 50.0% |
| !! | CGACATTGGTAGGGTTAGTC+CGG | - | chr7.1:86416876-86416895 | MS.gene94408:CDS | 50.0% |
| AACGTCATGAGCAACGGTGC+CGG | + | chr7.1:86413723-86413742 | None:intergenic | 55.0% | |
| AAGCAGCCCAGCCATAATGC+TGG | + | chr7.1:86416470-86416489 | None:intergenic | 55.0% | |
| GGTCAAAGACACCAAGCCGA+CGG | + | chr7.1:86413649-86413668 | None:intergenic | 55.0% | |
| GTCAAAGACACCAAGCCGAC+GGG | + | chr7.1:86413648-86413667 | None:intergenic | 55.0% | |
| GTTGCTCATGACGTTGGACC+TGG | - | chr7.1:86413728-86413747 | MS.gene94408:intron | 55.0% | |
| TACGCTCCTCCAACAACAGC+AGG | + | chr7.1:86415084-86415103 | None:intergenic | 55.0% | |
| TCGCGAGCTGTCTTCTCTGA+TGG | + | chr7.1:86413605-86413624 | None:intergenic | 55.0% | |
| ! | AACGAAGATACCGGCACCGA+TGG | + | chr7.1:86413696-86413715 | None:intergenic | 55.0% |
| ! | ATGAAGAGGGGTGTGGCGTT+TGG | + | chr7.1:86416422-86416441 | None:intergenic | 55.0% |
| ! | TGAAGAGGGGTGTGGCGTTT+GGG | + | chr7.1:86416421-86416440 | None:intergenic | 55.0% |
| !! | GAAGAGATGGTGGACGTACC+TGG | + | chr7.1:86418361-86418380 | None:intergenic | 55.0% |
| ATCGGAGCTTCCATCGGTGC+CGG | - | chr7.1:86413683-86413702 | MS.gene94408:intron | 60.0% | |
| GCTCGCGATAATTCCGGACG+TGG | - | chr7.1:86413617-86413636 | MS.gene94408:intron | 60.0% | |
| GGCACCGTTGCTCATGACGT+TGG | - | chr7.1:86413722-86413741 | MS.gene94408:intron | 60.0% | |
| TCTTCAGCTAAGCGGCGGGA+AGG | - | chr7.1:86417431-86417450 | MS.gene94408:intron | 60.0% | |
| ! | ATGAGCAGGAGGGTACGGCA+CGG | - | chr7.1:86418080-86418099 | MS.gene94408:intron | 60.0% |
| ! | GAAGAGGGGTGTGGCGTTTG+GGG | + | chr7.1:86416420-86416439 | None:intergenic | 60.0% |
| CCGACGGGAAAGACCACGTC+CGG | + | chr7.1:86413633-86413652 | None:intergenic | 65.0% | |
| CCGGACGTGGTCTTTCCCGT+CGG | - | chr7.1:86413630-86413649 | MS.gene94408:intron | 65.0% | |
| ! | CGTGGTCTTTCCCGTCGGCT+TGG | - | chr7.1:86413635-86413654 | MS.gene94408:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 86413491 | 86418602 | 86413491 | ID=MS.gene94408 |
| chr7.1 | mRNA | 86413491 | 86418602 | 86413491 | ID=MS.gene94408.t1;Parent=MS.gene94408 |
| chr7.1 | exon | 86418344 | 86418602 | 86418344 | ID=MS.gene94408.t1.exon1;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86418344 | 86418602 | 86418344 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86416686 | 86417092 | 86416686 | ID=MS.gene94408.t1.exon2;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86416686 | 86417092 | 86416686 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86416407 | 86416583 | 86416407 | ID=MS.gene94408.t1.exon3;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86416407 | 86416583 | 86416407 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86415830 | 86416054 | 86415830 | ID=MS.gene94408.t1.exon4;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86415830 | 86416054 | 86415830 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86415562 | 86415738 | 86415562 | ID=MS.gene94408.t1.exon5;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86415562 | 86415738 | 86415562 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86414504 | 86414731 | 86414504 | ID=MS.gene94408.t1.exon6;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86414504 | 86414731 | 86414504 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86413732 | 86413824 | 86413732 | ID=MS.gene94408.t1.exon7;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86413732 | 86413824 | 86413732 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| chr7.1 | exon | 86413491 | 86413634 | 86413491 | ID=MS.gene94408.t1.exon8;Parent=MS.gene94408.t1 |
| chr7.1 | CDS | 86413491 | 86413634 | 86413491 | ID=cds.MS.gene94408.t1;Parent=MS.gene94408.t1 |
| Gene Sequence |
| Protein sequence |
