Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94916.t1 | XP_013444623.2 | 88.4 | 1125 | 97 | 3 | 1 | 1093 | 48 | 1171 | 0.00E+00 | 1908.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94916.t1 | G8A2Y6 | 88.4 | 1125 | 97 | 3 | 1 | 1093 | 48 | 1171 | 0.0e+00 | 1908.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene94916 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene94916 | 0.848775 | 4.94E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene94916 | 0.815087 | 1.11E-51 | -1.69E-46 |
| MS.gene050516 | MS.gene94916 | 0.810655 | 1.03E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene94916 | 0.801123 | 1.04E-48 | -1.69E-46 |
| MS.gene051663 | MS.gene94916 | 0.830317 | 3.14E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene94916 | 0.808367 | 3.21E-50 | -1.69E-46 |
| MS.gene052207 | MS.gene94916 | 0.807037 | 6.15E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene94916 | 0.835896 | 1.28E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene94916 | 0.812358 | 4.41E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene94916 | 0.805104 | 1.57E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene94916 | 0.813462 | 2.53E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene94916 | 0.833329 | 5.68E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene94916 | 0.8129 | 3.36E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene94916 | 0.831376 | 1.73E-55 | -1.69E-46 |
| MS.gene058833 | MS.gene94916 | 0.81052 | 1.11E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene94916 | 0.801972 | 7.00E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene94916 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene94916 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene94916 | 0.819169 | 1.34E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATGAATTTAAAAAC+GGG | + | 55983:6238-6257 | MS.gene94916:intergenic | 10.0% |
| !! | CAAATTTATGAATTTAAAAA+CGG | + | 55983:6239-6258 | MS.gene94916:intergenic | 10.0% |
| !!! | TTATGTGTATAATATAATTT+TGG | + | 55983:4155-4174 | MS.gene94916:intergenic | 10.0% |
| !! | AATTTATGAATTTAAAAACG+GGG | + | 55983:6237-6256 | MS.gene94916:intergenic | 15.0% |
| !! | ACAAAACTGTAAATATTTAT+AGG | + | 55983:5873-5892 | MS.gene94916:intergenic | 15.0% |
| !! | CAAAACTGTAAATATTTATA+GGG | + | 55983:5872-5891 | MS.gene94916:intergenic | 15.0% |
| !!! | AAAAAAAAACTAGTCTTTTA+TGG | + | 55983:6600-6619 | MS.gene94916:intergenic | 15.0% |
| !!! | AAGTATGATTTTATTTTGTA+AGG | + | 55983:5903-5922 | MS.gene94916:intergenic | 15.0% |
| !!! | AATATTGGAAATATTGATTA+CGG | - | 55983:4109-4128 | MS.gene94916:CDS | 15.0% |
| !!! | CGTTTTTAAATTCATAAATT+TGG | - | 55983:6237-6256 | MS.gene94916:CDS | 15.0% |
| !! | ATAAATCAATTTAGGCTTAA+AGG | - | 55983:6168-6187 | MS.gene94916:CDS | 20.0% |
| !! | ATAATTAAGAAAATTAGAGC+TGG | - | 55983:3800-3819 | MS.gene94916:intron | 20.0% |
| !! | ATTTATGAATTTAAAAACGG+GGG | + | 55983:6236-6255 | MS.gene94916:intergenic | 20.0% |
| !! | CAATATTTCCAATATTTGAA+TGG | + | 55983:4105-4124 | MS.gene94916:intergenic | 20.0% |
| !! | TAAATATGAAATCAGATTCT+AGG | - | 55983:3558-3577 | MS.gene94916:intron | 20.0% |
| !! | TTAAAAACAACAAATTTGGA+AGG | + | 55983:3227-3246 | MS.gene94916:intergenic | 20.0% |
| !! | TTAGTTCCATAAATCAATTT+AGG | - | 55983:6160-6179 | MS.gene94916:CDS | 20.0% |
| !! | TTTATCTAGGAATTCATTTA+GGG | + | 55983:4600-4619 | MS.gene94916:intergenic | 20.0% |
| !!! | AAAAAAAGAAAAGCGTAAAA+TGG | + | 55983:6435-6454 | MS.gene94916:intergenic | 20.0% |
| !!! | AAAATTTCCATCAACATTTT+TGG | + | 55983:5964-5983 | MS.gene94916:intergenic | 20.0% |
| !!! | AAATGTTATGTTGACTAAAT+TGG | - | 55983:2002-2021 | MS.gene94916:intron | 20.0% |
| !!! | AAGATTTTAATCAAAAGGAA+AGG | - | 55983:3345-3364 | MS.gene94916:CDS | 20.0% |
| !!! | AAGTGCAATTTTATTTTGTA+AGG | - | 55983:6060-6079 | MS.gene94916:CDS | 20.0% |
| !!! | ACATTTTCCTTAAGTATTTT+AGG | - | 55983:5936-5955 | MS.gene94916:CDS | 20.0% |
| !!! | AGAGCATATTATTATTTCTT+TGG | - | 55983:6397-6416 | MS.gene94916:CDS | 20.0% |
| !!! | AGATTTTAATCAAAAGGAAA+GGG | - | 55983:3346-3365 | MS.gene94916:CDS | 20.0% |
| !!! | ATGTATTAATTCGTTCATTT+TGG | - | 55983:4328-4347 | MS.gene94916:CDS | 20.0% |
| !!! | CATTTTCCTTAAGTATTTTA+GGG | - | 55983:5937-5956 | MS.gene94916:CDS | 20.0% |
| !!! | GATAATTGTAGTTGTTTTTA+CGG | + | 55983:6487-6506 | MS.gene94916:intergenic | 20.0% |
| !!! | GCTCTAATTTTCTTAATTAT+AGG | + | 55983:3800-3819 | MS.gene94916:intergenic | 20.0% |
| !!! | GCTGATGAAAATTTTTTATA+GGG | - | 55983:6000-6019 | MS.gene94916:CDS | 20.0% |
| !!! | TCCTAAGGTATTAAATTTTA+GGG | - | 55983:5829-5848 | MS.gene94916:CDS | 20.0% |
| !!! | TGCTGATGAAAATTTTTTAT+AGG | - | 55983:5999-6018 | MS.gene94916:CDS | 20.0% |
| !!! | TTATCTACTAGTTTTAATTG+TGG | - | 55983:4379-4398 | MS.gene94916:CDS | 20.0% |
| !!! | TTCCTAATTTGTTTAATTGT+TGG | + | 55983:3527-3546 | MS.gene94916:intergenic | 20.0% |
| !!! | TTGTCTTTCTTTTTTTATCT+AGG | + | 55983:4613-4632 | MS.gene94916:intergenic | 20.0% |
| !!! | TTTAAGCCTAAATTGATTTA+TGG | + | 55983:6169-6188 | MS.gene94916:intergenic | 20.0% |
| !!! | TTTTATCTAGGAATTCATTT+AGG | + | 55983:4601-4620 | MS.gene94916:intergenic | 20.0% |
| ! | AAATCTTTGTTACATAATGC+AGG | - | 55983:5757-5776 | MS.gene94916:CDS | 25.0% |
| ! | AACAAAAAATATGTTCTAGC+AGG | + | 55983:6907-6926 | MS.gene94916:intergenic | 25.0% |
| ! | AATAGAAATGAGTTGTTAAG+TGG | - | 55983:6750-6769 | MS.gene94916:CDS | 25.0% |
| ! | ACAAAGAAGAAGATTACTTA+TGG | - | 55983:5086-5105 | MS.gene94916:CDS | 25.0% |
| ! | ACCCTAAAATTTAATACCTT+AGG | + | 55983:5833-5852 | MS.gene94916:intergenic | 25.0% |
| ! | AGCCAACAATTAAACAAATT+AGG | - | 55983:3522-3541 | MS.gene94916:intron | 25.0% |
| ! | ATAACTAAAATGACTAGTGT+TGG | - | 55983:6628-6647 | MS.gene94916:CDS | 25.0% |
| ! | ATACTTAAGGAAAATGTCAT+AGG | + | 55983:5933-5952 | MS.gene94916:intergenic | 25.0% |
| ! | ATAGAAATGAGTTGTTAAGT+GGG | - | 55983:6751-6770 | MS.gene94916:CDS | 25.0% |
| ! | CTAAAATTTAATACCTTAGG+AGG | + | 55983:5830-5849 | MS.gene94916:intergenic | 25.0% |
| ! | GATATAAACTCGATAATGAA+GGG | - | 55983:7158-7177 | MS.gene94916:CDS | 25.0% |
| ! | GTCGTTAAAAACAACAAATT+TGG | + | 55983:3231-3250 | MS.gene94916:intergenic | 25.0% |
| ! | GTTTGTGATAATAGAGAAAT+TGG | - | 55983:2960-2979 | MS.gene94916:intron | 25.0% |
| ! | TAATAGAGAAATTGGTAAAG+AGG | - | 55983:2968-2987 | MS.gene94916:intron | 25.0% |
| ! | TACTTAAGGAAAATGTCATA+GGG | + | 55983:5932-5951 | MS.gene94916:intergenic | 25.0% |
| ! | TACTTCTTTCCTTTATCATA+AGG | - | 55983:4268-4287 | MS.gene94916:CDS | 25.0% |
| ! | TCTCGATAAACAGTAAAAAT+AGG | + | 55983:2084-2103 | MS.gene94916:intergenic | 25.0% |
| ! | TGAAGTTATTCATGAATCTA+CGG | - | 55983:2518-2537 | MS.gene94916:intron | 25.0% |
| ! | TTTCATGTTGAAATGAGAAA+AGG | - | 55983:6289-6308 | MS.gene94916:CDS | 25.0% |
| !! | AGACACTTTGAAAATTGAAA+GGG | + | 55983:6264-6283 | MS.gene94916:intergenic | 25.0% |
| !! | AGTAGAAAGAAAAGATTTTC+TGG | - | 55983:3731-3750 | MS.gene94916:intron | 25.0% |
| !! | CTACAAAAATCTGAACTTTT+GGG | - | 55983:1976-1995 | MS.gene94916:CDS | 25.0% |
| !! | GAAATCTGAAAAGTACAAAT+AGG | + | 55983:5533-5552 | MS.gene94916:intergenic | 25.0% |
| !! | GAACAATATTCTAAAAGCTA+AGG | - | 55983:2593-2612 | MS.gene94916:intron | 25.0% |
| !! | TGAAATTGAGGATAAGATTT+TGG | - | 55983:2170-2189 | MS.gene94916:intron | 25.0% |
| !! | TTCCAAGAGCATAAAATTTA+GGG | + | 55983:6134-6153 | MS.gene94916:intergenic | 25.0% |
| !! | TTTCTGGAAAAACAGAAAAT+TGG | - | 55983:3747-3766 | MS.gene94916:intron | 25.0% |
| !!! | ATAAGGAAGATGTTGATTTT+TGG | - | 55983:2043-2062 | MS.gene94916:intron | 25.0% |
| !!! | ATGTTGATGGAAAATTTTGT+AGG | - | 55983:6030-6049 | MS.gene94916:CDS | 25.0% |
| !!! | ATTAATTTGTTCATCCAAAC+AGG | - | 55983:5440-5459 | MS.gene94916:CDS | 25.0% |
| !!! | CAGTGAAGATTTTAATCAAA+AGG | - | 55983:3340-3359 | MS.gene94916:CDS | 25.0% |
| !!! | CTCCTAAGGTATTAAATTTT+AGG | - | 55983:5828-5847 | MS.gene94916:CDS | 25.0% |
| !!! | CTTTTGATTAAAATCTTCAC+TGG | + | 55983:3342-3361 | MS.gene94916:intergenic | 25.0% |
| !!! | GTTGATGGAAATTTTTTACA+GGG | - | 55983:5969-5988 | MS.gene94916:CDS | 25.0% |
| !!! | TAAGGAAGATGTTGATTTTT+GGG | - | 55983:2044-2063 | MS.gene94916:intron | 25.0% |
| !!! | TGCACAATATTTTTTTCTAG+AGG | - | 55983:4412-4431 | MS.gene94916:CDS | 25.0% |
| !!! | TGTTGATGGAAAATTTTGTA+GGG | - | 55983:6031-6050 | MS.gene94916:CDS | 25.0% |
| !!! | TGTTGATGGAAATTTTTTAC+AGG | - | 55983:5968-5987 | MS.gene94916:CDS | 25.0% |
| !!! | TTAATTTGTTCATCCAAACA+GGG | - | 55983:5441-5460 | MS.gene94916:CDS | 25.0% |
| !!! | TTGATGGAAATTTTTTACAG+GGG | - | 55983:5970-5989 | MS.gene94916:CDS | 25.0% |
| AAACTTGCATTAAATGTGAC+AGG | - | 55983:6974-6993 | MS.gene94916:CDS | 30.0% | |
| AAATGAGAAAAGGATGGTAT+TGG | - | 55983:6299-6318 | MS.gene94916:CDS | 30.0% | |
| AACATACATACCAGAACATA+TGG | + | 55983:5124-5143 | MS.gene94916:intergenic | 30.0% | |
| AAGAAGAAGATTACTTATGG+TGG | - | 55983:5089-5108 | MS.gene94916:CDS | 30.0% | |
| AAGGATAAGTCAAAACTAGT+GGG | + | 55983:5561-5580 | MS.gene94916:intergenic | 30.0% | |
| AATCGTAAAAGAAGCAAAGT+AGG | + | 55983:6207-6226 | MS.gene94916:intergenic | 30.0% | |
| ACAAATTCATTCAGCATCAA+TGG | + | 55983:5594-5613 | MS.gene94916:intergenic | 30.0% | |
| ACTGTTTATCGAGATTCATT+TGG | - | 55983:2090-2109 | MS.gene94916:intron | 30.0% | |
| AGTTAGTAAGGATATGGAAA+TGG | - | 55983:2752-2771 | MS.gene94916:intron | 30.0% | |
| ATAGGGACTAAAAATGTTGA+TGG | - | 55983:6017-6036 | MS.gene94916:CDS | 30.0% | |
| ATGTATTCTTGAAGCTGTTT+GGG | - | 55983:5220-5239 | MS.gene94916:CDS | 30.0% | |
| ATGTTGAAATGAGAAAAGGA+TGG | - | 55983:6293-6312 | MS.gene94916:CDS | 30.0% | |
| CAACAAACTTAAAAGAGAGA+TGG | - | 55983:5012-5031 | MS.gene94916:CDS | 30.0% | |
| CACTAGCAGAAATGAAATTA+AGG | - | 55983:5161-5180 | MS.gene94916:CDS | 30.0% | |
| CATCAATGGTTAGAAAAAGA+AGG | + | 55983:5580-5599 | MS.gene94916:intergenic | 30.0% | |
| CATCTAATACCATACAAGTT+TGG | - | 55983:6528-6547 | MS.gene94916:CDS | 30.0% | |
| CATTACTAGAAACAGAAGAA+GGG | + | 55983:1912-1931 | MS.gene94916:intergenic | 30.0% | |
| CATTATCGAGTTTATATCCA+CGG | + | 55983:7156-7175 | MS.gene94916:intergenic | 30.0% | |
| GAAGAAAATTATGATGAGGA+AGG | - | 55983:2452-2471 | MS.gene94916:intron | 30.0% | |
| GAATGTGAATTATACTTACC+TGG | + | 55983:1882-1901 | MS.gene94916:intergenic | 30.0% | |
| GATAAAGATGCTTTCTTCAA+AGG | - | 55983:4022-4041 | MS.gene94916:CDS | 30.0% | |
| GCTAAAAGACCTTATGATAA+AGG | + | 55983:4280-4299 | MS.gene94916:intergenic | 30.0% | |
| GGATATAAACTCGATAATGA+AGG | - | 55983:7157-7176 | MS.gene94916:CDS | 30.0% | |
| GGCAAAACAACAGATAATAA+TGG | - | 55983:2873-2892 | MS.gene94916:intron | 30.0% | |
| GTAACAATCCAAAAATTCCT+GGG | + | 55983:4843-4862 | MS.gene94916:intergenic | 30.0% | |
| GTACCATGATAAGATAACAA+AGG | - | 55983:7124-7143 | MS.gene94916:intron | 30.0% | |
| GTCATAAATGAGCCATTAAT+AGG | + | 55983:3059-3078 | MS.gene94916:intergenic | 30.0% | |
| GTTGACTAAATTGGAGAATT+GGG | - | 55983:2011-2030 | MS.gene94916:intron | 30.0% | |
| TAAGTTTATTGTTCAAGGTG+AGG | - | 55983:2260-2279 | MS.gene94916:intron | 30.0% | |
| TAATTATAGGCTCAACTTCA+TGG | + | 55983:3787-3806 | MS.gene94916:intergenic | 30.0% | |
| TACTATCACCATTAACTTCA+TGG | + | 55983:3715-3734 | MS.gene94916:intergenic | 30.0% | |
| TATGTATTCTTGAAGCTGTT+TGG | - | 55983:5219-5238 | MS.gene94916:CDS | 30.0% | |
| TATTTACTAACTACTGCTTG+CGG | + | 55983:5049-5068 | MS.gene94916:intergenic | 30.0% | |
| TCATATATACTAATGCCATC+TGG | + | 55983:4518-4537 | MS.gene94916:intergenic | 30.0% | |
| TCGTCGTTCATCAAATAAAA+TGG | + | 55983:4001-4020 | MS.gene94916:intergenic | 30.0% | |
| TCTAGAGGATACTTATGTTT+AGG | - | 55983:4427-4446 | MS.gene94916:CDS | 30.0% | |
| TGATTCATCTTCAAAAGTGA+AGG | - | 55983:4694-4713 | MS.gene94916:intron | 30.0% | |
| TGCATTGAGGTATATAAAGT+TGG | - | 55983:5626-5645 | MS.gene94916:CDS | 30.0% | |
| TGGAGAAGAAAATTATGATG+AGG | - | 55983:2448-2467 | MS.gene94916:intron | 30.0% | |
| TGTAACAATCCAAAAATTCC+TGG | + | 55983:4844-4863 | MS.gene94916:intergenic | 30.0% | |
| TTCTCTAGTTAGTAAGGATA+TGG | - | 55983:2746-2765 | MS.gene94916:intron | 30.0% | |
| TTTAGATATACCAACTGAGA+TGG | - | 55983:3868-3887 | MS.gene94916:intron | 30.0% | |
| TTTCGAGATGCTAAAGAAAA+TGG | - | 55983:7002-7021 | MS.gene94916:CDS | 30.0% | |
| TTTGGTCCCTAAAATACTTA+AGG | + | 55983:5946-5965 | MS.gene94916:intergenic | 30.0% | |
| ! | AAAAGTACAAATAGGACAAG+TGG | + | 55983:5525-5544 | MS.gene94916:intergenic | 30.0% |
| ! | AACCCTAAATTTTATGCTCT+TGG | - | 55983:6129-6148 | MS.gene94916:CDS | 30.0% |
| ! | AAGAGTCGGATTTTATTCAT+TGG | - | 55983:5661-5680 | MS.gene94916:CDS | 30.0% |
| ! | AATTGAGGATAAGATTTTGG+AGG | - | 55983:2173-2192 | MS.gene94916:intron | 30.0% |
| ! | ATCAATGGATATGGACTATA+AGG | - | 55983:2668-2687 | MS.gene94916:intron | 30.0% |
| ! | ATCTCAGTTGGTATATCTAA+AGG | + | 55983:3869-3888 | MS.gene94916:intergenic | 30.0% |
| ! | CAGACACTTTGAAAATTGAA+AGG | + | 55983:6265-6284 | MS.gene94916:intergenic | 30.0% |
| ! | CTTCCAAGAGCATAAAATTT+AGG | + | 55983:6135-6154 | MS.gene94916:intergenic | 30.0% |
| ! | CTTTGCTTCTTTTACGATTT+TGG | - | 55983:6208-6227 | MS.gene94916:CDS | 30.0% |
| ! | GATCCTTTGTTATCTTATCA+TGG | + | 55983:7130-7149 | MS.gene94916:intergenic | 30.0% |
| ! | GATGCTAAAGAAAATGGTTT+TGG | - | 55983:7008-7027 | MS.gene94916:CDS | 30.0% |
| ! | GCTACAAAAATCTGAACTTT+TGG | - | 55983:1975-1994 | MS.gene94916:CDS | 30.0% |
| ! | TGTTGACTAAATTGGAGAAT+TGG | - | 55983:2010-2029 | MS.gene94916:intron | 30.0% |
| !! | AAGGGTGTGTTTGATTTTAA+TGG | - | 55983:7176-7195 | MS.gene94916:CDS | 30.0% |
| !! | ATTCATTTGGTGCTGTTAAA+AGG | - | 55983:2103-2122 | MS.gene94916:intron | 30.0% |
| !! | GAATTGGGTTGATAAGTATA+AGG | - | 55983:2026-2045 | MS.gene94916:intron | 30.0% |
| !! | GATGAGATTTTGAAAAGAGT+TGG | - | 55983:2141-2160 | MS.gene94916:intron | 30.0% |
| !! | TGTGTTTTTGTTGCTATGTT+TGG | - | 55983:2375-2394 | MS.gene94916:intron | 30.0% |
| !! | TTCATTTGGTGCTGTTAAAA+GGG | - | 55983:2104-2123 | MS.gene94916:intron | 30.0% |
| !!! | AAGGAAGATGTTGATTTTTG+GGG | - | 55983:2045-2064 | MS.gene94916:intron | 30.0% |
| !!! | ATGTTGATTTTTGGGGTATT+GGG | - | 55983:2052-2071 | MS.gene94916:intron | 30.0% |
| !!! | CTTGTTGTTCATAGTTCTTT+TGG | - | 55983:2630-2649 | MS.gene94916:intron | 30.0% |
| !!! | GACAGCTTATAGTTTTTTTG+TGG | - | 55983:5286-5305 | MS.gene94916:CDS | 30.0% |
| !!! | GGATTTTTTGACTTCTTCAT+CGG | + | 55983:4734-4753 | MS.gene94916:intergenic | 30.0% |
| !!! | TGATGGTAGTTTTGTTGAAT+TGG | - | 55983:1948-1967 | MS.gene94916:CDS | 30.0% |
| AAAAGAGAGATGGAGTTGTT+TGG | - | 55983:5022-5041 | MS.gene94916:CDS | 35.0% | |
| AAATGGATGACAGTGTGATT+GGG | - | 55983:2769-2788 | MS.gene94916:intron | 35.0% | |
| AAATTCAGCCCAACAAAGAT+TGG | - | 55983:3623-3642 | MS.gene94916:intron | 35.0% | |
| AACCTTCAAAATGAAGTTGC+AGG | - | 55983:2852-2871 | MS.gene94916:intron | 35.0% | |
| AAGCTATCCTTGAGAGTTTA+TGG | + | 55983:5262-5281 | MS.gene94916:intergenic | 35.0% | |
| AAGTCCGTAATGAAGGATAT+CGG | - | 55983:4887-4906 | MS.gene94916:CDS | 35.0% | |
| AATACCATACAAGTTTGGCT+CGG | - | 55983:6533-6552 | MS.gene94916:CDS | 35.0% | |
| AATGAGTGCTTGAAAGATTC+TGG | - | 55983:3386-3405 | MS.gene94916:intron | 35.0% | |
| ACAAGAAACCAAGGATCATA+CGG | - | 55983:3096-3115 | MS.gene94916:intron | 35.0% | |
| ACATGGTACTACTATCTAGA+TGG | + | 55983:6873-6892 | MS.gene94916:intergenic | 35.0% | |
| ACTTCAGACCATGAAGTTAA+TGG | - | 55983:3704-3723 | MS.gene94916:intron | 35.0% | |
| AGAAATCAGGGAAGGAATAT+TGG | - | 55983:4798-4817 | MS.gene94916:intron | 35.0% | |
| AGAAGTTAAGTCCGTAATGA+AGG | - | 55983:4880-4899 | MS.gene94916:CDS | 35.0% | |
| ATTAACTTCATGGTCTGAAG+TGG | + | 55983:3705-3724 | MS.gene94916:intergenic | 35.0% | |
| ATTTCTGCTAGTGAAACAGT+GGG | + | 55983:5154-5173 | MS.gene94916:intergenic | 35.0% | |
| CAGAATCTTCACTAGGATTT+AGG | + | 55983:3589-3608 | MS.gene94916:intergenic | 35.0% | |
| CCATTACTAGAAACAGAAGA+AGG | + | 55983:1913-1932 | MS.gene94916:intergenic | 35.0% | |
| GAAAATCCTGATGCAAAATC+TGG | - | 55983:3164-3183 | MS.gene94916:intron | 35.0% | |
| GAAGGATAAGTCAAAACTAG+TGG | + | 55983:5562-5581 | MS.gene94916:intergenic | 35.0% | |
| GAATGGCTCCATTCAAATAT+TGG | - | 55983:4094-4113 | MS.gene94916:CDS | 35.0% | |
| GAGAATAGCAAACAAGATGA+CGG | - | 55983:2822-2841 | MS.gene94916:intron | 35.0% | |
| GAGATGGAATCAATTGAAGT+TGG | - | 55983:3884-3903 | MS.gene94916:CDS | 35.0% | |
| GATCACGGAAAAAGAAATAG+AGG | - | 55983:4928-4947 | MS.gene94916:CDS | 35.0% | |
| GGTTATAGGTGTAAAAAAGC+CGG | - | 55983:2548-2567 | MS.gene94916:intron | 35.0% | |
| GTGGCTAAGTTTATTGTTCA+AGG | - | 55983:2255-2274 | MS.gene94916:intron | 35.0% | |
| GTGTCAATCTCATGTTGAAT+TGG | - | 55983:6324-6343 | MS.gene94916:CDS | 35.0% | |
| GTTAGATCTTCCATATGTTC+TGG | - | 55983:5111-5130 | MS.gene94916:CDS | 35.0% | |
| TAGTGAAGATTCTGATCAGA+AGG | - | 55983:3595-3614 | MS.gene94916:intron | 35.0% | |
| TATATACTAATGCCATCTGG+AGG | + | 55983:4515-4534 | MS.gene94916:intergenic | 35.0% | |
| TATGACTTCACTCTCATTAG+AGG | + | 55983:2799-2818 | MS.gene94916:intergenic | 35.0% | |
| TATTTGAATGGAGCCATTCA+TGG | + | 55983:4093-4112 | MS.gene94916:intergenic | 35.0% | |
| TCAAGCACTCATTCTTTGTT+GGG | + | 55983:3379-3398 | MS.gene94916:intergenic | 35.0% | |
| TCATTACGGACTTAACTTCT+GGG | + | 55983:4880-4899 | MS.gene94916:intergenic | 35.0% | |
| TCCAGAAGTGACACATTAAA+TGG | - | 55983:3287-3306 | MS.gene94916:CDS | 35.0% | |
| TCTTCAAAAGTGAAGGTTGA+TGG | - | 55983:4701-4720 | MS.gene94916:intron | 35.0% | |
| TGATGTCACCAATCTTTGTT+GGG | + | 55983:3634-3653 | MS.gene94916:intergenic | 35.0% | |
| TGGAAAAACAGAAAATTGGC+TGG | - | 55983:3751-3770 | MS.gene94916:intron | 35.0% | |
| TTAAAGCTGGCAAGAAATCA+GGG | - | 55983:4786-4805 | MS.gene94916:intron | 35.0% | |
| TTACATAATGCAGGCTCATA+TGG | - | 55983:5766-5785 | MS.gene94916:CDS | 35.0% | |
| TTAGGGACCAAAAATGTTGA+TGG | - | 55983:5954-5973 | MS.gene94916:CDS | 35.0% | |
| TTATTGTCTTCTCTGTCCTT+CGG | + | 55983:3023-3042 | MS.gene94916:intergenic | 35.0% | |
| TTCAAGCACTCATTCTTTGT+TGG | + | 55983:3380-3399 | MS.gene94916:intergenic | 35.0% | |
| TTCATTACGGACTTAACTTC+TGG | + | 55983:4881-4900 | MS.gene94916:intergenic | 35.0% | |
| TTCTGATCAGAATCTTCACT+AGG | + | 55983:3596-3615 | MS.gene94916:intergenic | 35.0% | |
| TTGATGTCACCAATCTTTGT+TGG | + | 55983:3635-3654 | MS.gene94916:intergenic | 35.0% | |
| TTTATTCTGTCAGTGCATTG+AGG | - | 55983:5613-5632 | MS.gene94916:CDS | 35.0% | |
| ! | ATCTTCACTGGCATTTTTGT+CGG | + | 55983:3330-3349 | MS.gene94916:intergenic | 35.0% |
| ! | ATTGGTGACATCAAAAACTC+TGG | - | 55983:3641-3660 | MS.gene94916:intron | 35.0% |
| ! | CGGATTTTATTCATTGGAGA+TGG | - | 55983:5667-5686 | MS.gene94916:CDS | 35.0% |
| ! | GAGAAAGAGATGTTGATGAA+GGG | - | 55983:2489-2508 | MS.gene94916:intron | 35.0% |
| ! | GGTGTTGAAGAAATTGATGA+TGG | - | 55983:1931-1950 | MS.gene94916:CDS | 35.0% |
| ! | GTTCGTGATAATGAATTGTG+TGG | - | 55983:3968-3987 | MS.gene94916:CDS | 35.0% |
| ! | TAGTCTTTTATGGTCTCCTA+CGG | + | 55983:6590-6609 | MS.gene94916:intergenic | 35.0% |
| ! | TCAATTGATTCCATCTCAGT+TGG | + | 55983:3881-3900 | MS.gene94916:intergenic | 35.0% |
| ! | TCTCCAAATTTTTCTGCTTC+TGG | + | 55983:3253-3272 | MS.gene94916:intergenic | 35.0% |
| !! | AGTTGGTGGAAATGAAATTG+AGG | - | 55983:2158-2177 | MS.gene94916:intron | 35.0% |
| !! | CCTTCTTCTGTTTCTAGTAA+TGG | - | 55983:1910-1929 | MS.gene94916:CDS | 35.0% |
| !! | GAGATTTTGAAAAGAGTTGG+TGG | - | 55983:2144-2163 | MS.gene94916:intron | 35.0% |
| !! | TCAATTGAAGTTGGTGAAGA+TGG | - | 55983:3893-3912 | MS.gene94916:CDS | 35.0% |
| !! | TCATTGAACGATAGTTTTGC+TGG | - | 55983:5492-5511 | MS.gene94916:CDS | 35.0% |
| !! | TCCATTTAATGTGTCACTTC+TGG | + | 55983:3291-3310 | MS.gene94916:intergenic | 35.0% |
| !!! | GATGTTGATTTTTGGGGTAT+TGG | - | 55983:2051-2070 | MS.gene94916:intron | 35.0% |
| !!! | GGCTTTTTTACACCTATAAC+CGG | + | 55983:2549-2568 | MS.gene94916:intergenic | 35.0% |
| !!! | GTTGTTTCGTTTTGGAGATA+AGG | - | 55983:2407-2426 | MS.gene94916:intron | 35.0% |
| AAAAAAGCCGGAGTTGGATA+AGG | - | 55983:2560-2579 | MS.gene94916:intron | 40.0% | |
| AAATTTGAACCCAGCGAAGA+AGG | - | 55983:4643-4662 | MS.gene94916:intron | 40.0% | |
| AACCAAAGCCATTAACCTGA+CGG | + | 55983:3460-3479 | MS.gene94916:intergenic | 40.0% | |
| AACTTTCTCACCTCCATGAA+TGG | - | 55983:4077-4096 | MS.gene94916:CDS | 40.0% | |
| AAGGATCATACGGTCTGTTA+AGG | - | 55983:3106-3125 | MS.gene94916:intron | 40.0% | |
| AAGTCAAAACTAGTGGGAGA+GGG | + | 55983:5555-5574 | MS.gene94916:intergenic | 40.0% | |
| AATCCAAAGACTGTTGTCGA+AGG | - | 55983:4749-4768 | MS.gene94916:intron | 40.0% | |
| AATGCCATCTGGAGGAATAA+AGG | + | 55983:4507-4526 | MS.gene94916:intergenic | 40.0% | |
| AGAAACAGAAGAAGGGTCAT+TGG | + | 55983:1905-1924 | MS.gene94916:intergenic | 40.0% | |
| AGTCCGTAATGAAGGATATC+GGG | - | 55983:4888-4907 | MS.gene94916:CDS | 40.0% | |
| ATATCAAACACCGTCTATGC+GGG | + | 55983:6779-6798 | MS.gene94916:intergenic | 40.0% | |
| ATTAACCTGACGGTCTAAAG+CGG | + | 55983:3450-3469 | MS.gene94916:intergenic | 40.0% | |
| ATTGGCAGCACACAAAGAAA+TGG | - | 55983:4816-4835 | MS.gene94916:intron | 40.0% | |
| CACGGAAAAAGAAATAGAGG+AGG | - | 55983:4931-4950 | MS.gene94916:CDS | 40.0% | |
| CATTTCTGCTAGTGAAACAG+TGG | + | 55983:5155-5174 | MS.gene94916:intergenic | 40.0% | |
| CGACCAGAAGCAGAAAAATT+TGG | - | 55983:3247-3266 | MS.gene94916:CDS | 40.0% | |
| CGTAAAAGAAGCAAAGTAGG+AGG | + | 55983:6204-6223 | MS.gene94916:intergenic | 40.0% | |
| CTTCCCGATATCCTTCATTA+CGG | + | 55983:4894-4913 | MS.gene94916:intergenic | 40.0% | |
| GAAACAGAAGAAGGGTCATT+GGG | + | 55983:1904-1923 | MS.gene94916:intergenic | 40.0% | |
| GAAATGGATGACAGTGTGAT+TGG | - | 55983:2768-2787 | MS.gene94916:intron | 40.0% | |
| GACATGTCCATAAACTCTCA+AGG | - | 55983:5252-5271 | MS.gene94916:CDS | 40.0% | |
| GAGAACTGGATCAATGGATA+TGG | - | 55983:2659-2678 | MS.gene94916:intron | 40.0% | |
| GAGGAAGAGATTACAGAGAT+TGG | - | 55983:7092-7111 | MS.gene94916:intron | 40.0% | |
| GAGGTATATAAAGTTGGCGA+TGG | - | 55983:5632-5651 | MS.gene94916:CDS | 40.0% | |
| GATATCAAACACCGTCTATG+CGG | + | 55983:6780-6799 | MS.gene94916:intergenic | 40.0% | |
| GCAATCACGTGATATGGTTT+AGG | + | 55983:5713-5732 | MS.gene94916:intergenic | 40.0% | |
| GCTTGTTCCTTAGTGAATTG+CGG | + | 55983:1846-1865 | MS.gene94916:intergenic | 40.0% | |
| GGATCGTTCTCTAGTTAGTA+AGG | - | 55983:2740-2759 | MS.gene94916:intron | 40.0% | |
| GTGCTTGAAAGATTCTGGTA+CGG | - | 55983:3391-3410 | MS.gene94916:intron | 40.0% | |
| GTGGTGAAAATGTGATTGCA+AGG | - | 55983:2223-2242 | MS.gene94916:intron | 40.0% | |
| GTTAAAGCTGGCAAGAAATC+AGG | - | 55983:4785-4804 | MS.gene94916:intron | 40.0% | |
| GTTCAGTGAACAAGAAACCA+AGG | - | 55983:3087-3106 | MS.gene94916:intron | 40.0% | |
| GTTTATTGTTCAAGGTGAGG+AGG | - | 55983:2263-2282 | MS.gene94916:intron | 40.0% | |
| TAAACCGAGCCAAACTTGTA+TGG | + | 55983:6540-6559 | MS.gene94916:intergenic | 40.0% | |
| TAAGTCAAAACTAGTGGGAG+AGG | + | 55983:5556-5575 | MS.gene94916:intergenic | 40.0% | |
| TCATACTTTGTAGCCCTGTT+TGG | + | 55983:5457-5476 | MS.gene94916:intergenic | 40.0% | |
| TCCTCACGTACTCCTATTAA+TGG | - | 55983:3044-3063 | MS.gene94916:intron | 40.0% | |
| TCTTCACTAGGATTTAGGTC+AGG | + | 55983:3584-3603 | MS.gene94916:intergenic | 40.0% | |
| TGAACTTGGGAAAGAAAGCA+TGG | - | 55983:3190-3209 | MS.gene94916:CDS | 40.0% | |
| TGATCTGATGAGCAAGTTAC+CGG | - | 55983:4958-4977 | MS.gene94916:CDS | 40.0% | |
| TGGAAAGCAATCACGTGATA+TGG | + | 55983:5719-5738 | MS.gene94916:intergenic | 40.0% | |
| TTAACAGACCGTATGATCCT+TGG | + | 55983:3107-3126 | MS.gene94916:intergenic | 40.0% | |
| TTAGGCTCCAATTCAAGATC+TGG | + | 55983:5695-5714 | MS.gene94916:intergenic | 40.0% | |
| TTATGGTGCATGACCTGAAT+AGG | - | 55983:6557-6576 | MS.gene94916:CDS | 40.0% | |
| TTCCAAAGCAAGTCTATCAG+AGG | - | 55983:3478-3497 | MS.gene94916:intron | 40.0% | |
| TTGTCCTTTATTCCTCCAGA+TGG | - | 55983:4500-4519 | MS.gene94916:intron | 40.0% | |
| TTTCTGCTAGTGAAACAGTG+GGG | + | 55983:5153-5172 | MS.gene94916:intergenic | 40.0% | |
| ! | AAAAACTCTGGTGTTGAACC+TGG | - | 55983:3653-3672 | MS.gene94916:intron | 40.0% |
| ! | AGTGATGGTTCTGTTAAAGC+TGG | - | 55983:4773-4792 | MS.gene94916:intron | 40.0% |
| ! | CAAAATCTGGCGTTGAACTT+GGG | - | 55983:3177-3196 | MS.gene94916:CDS | 40.0% |
| ! | CAAAGATTTTTGCAGTCACC+AGG | + | 55983:5746-5765 | MS.gene94916:intergenic | 40.0% |
| ! | GAAATGGTCCCAGGAATTTT+TGG | - | 55983:4832-4851 | MS.gene94916:intron | 40.0% |
| ! | GATTGCAAGGAATAGTTCTG+TGG | - | 55983:2236-2255 | MS.gene94916:intron | 40.0% |
| ! | GATTTTGTTAAGGCTGTTCG+TGG | - | 55983:2294-2313 | MS.gene94916:intron | 40.0% |
| ! | GGAAATATTGATTACGGAGC+AGG | - | 55983:4115-4134 | MS.gene94916:CDS | 40.0% |
| ! | GGAGAAAGAGATGTTGATGA+AGG | - | 55983:2488-2507 | MS.gene94916:intron | 40.0% |
| ! | GGAGAAGGGTGATTTTGTTA+AGG | - | 55983:2284-2303 | MS.gene94916:intron | 40.0% |
| ! | TAGGAATTCATTTAGGGCCT+CGG | + | 55983:4594-4613 | MS.gene94916:intergenic | 40.0% |
| ! | TCTTCACTGGCATTTTTGTC+GGG | + | 55983:3329-3348 | MS.gene94916:intergenic | 40.0% |
| ! | TGAGAAAAGGATGGTATTGG+TGG | - | 55983:6302-6321 | MS.gene94916:CDS | 40.0% |
| ! | TGCCTGCAACTTCATTTTGA+AGG | + | 55983:2857-2876 | MS.gene94916:intergenic | 40.0% |
| !! | ATTGAAGTTGGTGAAGATGG+TGG | - | 55983:3896-3915 | MS.gene94916:CDS | 40.0% |
| !! | GGTGTTACTGTCATCAAGAA+AGG | - | 55983:7029-7048 | MS.gene94916:intron | 40.0% |
| !! | GTGACGAAGTTGTTTCGTTT+TGG | - | 55983:2399-2418 | MS.gene94916:intron | 40.0% |
| !! | TACAAGTTTGGCTCGGTTTA+TGG | - | 55983:6540-6559 | MS.gene94916:CDS | 40.0% |
| !! | TTTTGAAGATTTGCCACTCC+AGG | + | 55983:3674-3693 | MS.gene94916:intergenic | 40.0% |
| !! | TTTTGAAGGTCTTCCAATCC+AGG | + | 55983:3419-3438 | MS.gene94916:intergenic | 40.0% |
| !!! | GTTTCGTTTTGGAGATAAGG+AGG | - | 55983:2410-2429 | MS.gene94916:intron | 40.0% |
| !!! | GTTTTGGAGATAAGGAGGTT+CGG | - | 55983:2415-2434 | MS.gene94916:intron | 40.0% |
| AAAATCATACCGCGGTGGAA+AGG | - | 55983:4548-4567 | MS.gene94916:intron | 45.0% | |
| AAAGATTCTGGTACGGAACC+TGG | - | 55983:3398-3417 | MS.gene94916:intron | 45.0% | |
| AAATCCGAGAAATGGCTAGG+CGG | - | 55983:2697-2716 | MS.gene94916:intron | 45.0% | |
| ACGAAACTCCTATTCCTCTC+CGG | + | 55983:4980-4999 | MS.gene94916:intergenic | 45.0% | |
| ACGGTCTGTTAAGGAAGCTA+AGG | - | 55983:3115-3134 | MS.gene94916:intron | 45.0% | |
| ACTGTTGTCGAAGGAAGTGA+TGG | - | 55983:4758-4777 | MS.gene94916:intron | 45.0% | |
| AGACCAACCACTAGAAGAAG+TGG | - | 55983:7070-7089 | MS.gene94916:intron | 45.0% | |
| AGCTGTTCCTTATCCAACTC+CGG | + | 55983:2570-2589 | MS.gene94916:intergenic | 45.0% | |
| AGGTGTAAAAAAGCCGGAGT+TGG | - | 55983:2554-2573 | MS.gene94916:intron | 45.0% | |
| CAAGCTTCTTCATGATCACC+AGG | - | 55983:1861-1880 | MS.gene94916:CDS | 45.0% | |
| CACCAGAGAAAATCATACCG+CGG | - | 55983:4540-4559 | MS.gene94916:intron | 45.0% | |
| CAGGCTCATATGGATATGCT+TGG | - | 55983:5776-5795 | MS.gene94916:CDS | 45.0% | |
| CATATGGATATGCTTGGAGG+TGG | - | 55983:5782-5801 | MS.gene94916:CDS | 45.0% | |
| CGTAATGAAGGATATCGGGA+AGG | - | 55983:4892-4911 | MS.gene94916:CDS | 45.0% | |
| CTTCCTTCGACAACAGTCTT+TGG | + | 55983:4755-4774 | MS.gene94916:intergenic | 45.0% | |
| CTTCGCTGGGTTCAAATTTC+TGG | + | 55983:4642-4661 | MS.gene94916:intergenic | 45.0% | |
| GAAGGATATCGGGAAGGATT+TGG | - | 55983:4898-4917 | MS.gene94916:CDS | 45.0% | |
| GAGAAATCCGAGAAATGGCT+AGG | - | 55983:2694-2713 | MS.gene94916:intron | 45.0% | |
| GATAACAAAGGATCGATCCG+TGG | - | 55983:7136-7155 | MS.gene94916:CDS | 45.0% | |
| GATGGCTCCAGATCTTGAAT+TGG | - | 55983:5685-5704 | MS.gene94916:CDS | 45.0% | |
| GCAATGCTTTCGTTGTTGCA+CGG | - | 55983:5804-5823 | MS.gene94916:CDS | 45.0% | |
| GCTCATATGGATATGCTTGG+AGG | - | 55983:5779-5798 | MS.gene94916:CDS | 45.0% | |
| GGTTCGAGAAATCCGAGAAA+TGG | - | 55983:2689-2708 | MS.gene94916:intron | 45.0% | |
| GTGATTGCTTTCCAAGATCC+TGG | - | 55983:5725-5744 | MS.gene94916:CDS | 45.0% | |
| TAAGAAGCTAGCTAGGGAGA+TGG | - | 55983:2197-2216 | MS.gene94916:intron | 45.0% | |
| TATGTTCTAGCAGGCAACTC+AGG | + | 55983:6898-6917 | MS.gene94916:intergenic | 45.0% | |
| TCATGAATCTACGGAGACAC+CGG | - | 55983:2527-2546 | MS.gene94916:intron | 45.0% | |
| TCTTCCTCCACTTCTTCTAG+TGG | + | 55983:7080-7099 | MS.gene94916:intergenic | 45.0% | |
| TGAAGCGAGAACTGGATCAA+TGG | - | 55983:2653-2672 | MS.gene94916:intron | 45.0% | |
| TGATGAGGAAGGCAAAAGCT+AGG | - | 55983:2463-2482 | MS.gene94916:intron | 45.0% | |
| TGTTCCTTAGTGAATTGCGG+CGG | + | 55983:1843-1862 | MS.gene94916:intergenic | 45.0% | |
| TTGAATGGAGCCATTCATGG+AGG | + | 55983:4090-4109 | MS.gene94916:intergenic | 45.0% | |
| ! | AAGCGGTCTCAGACTTTTGA+AGG | + | 55983:3433-3452 | MS.gene94916:intergenic | 45.0% |
| ! | AGGAATTCATTTAGGGCCTC+GGG | + | 55983:4593-4612 | MS.gene94916:intergenic | 45.0% |
| ! | CTCCTCTGATAGACTTGCTT+TGG | + | 55983:3483-3502 | MS.gene94916:intergenic | 45.0% |
| ! | GCAAAATCTGGCGTTGAACT+TGG | - | 55983:3176-3195 | MS.gene94916:CDS | 45.0% |
| ! | GCCATTAATAGGAGTACGTG+AGG | + | 55983:3048-3067 | MS.gene94916:intergenic | 45.0% |
| ! | GCTTTAGACCGTCAGGTTAA+TGG | - | 55983:3449-3468 | MS.gene94916:intron | 45.0% |
| ! | GGAGGTTCGGTATACTGAAA+TGG | - | 55983:2428-2447 | MS.gene94916:intron | 45.0% |
| ! | TCAACGCCAGATTTTGCATC+AGG | + | 55983:3173-3192 | MS.gene94916:intergenic | 45.0% |
| ! | TCTTTTGGTGAAGCGAGAAC+TGG | - | 55983:2645-2664 | MS.gene94916:intron | 45.0% |
| ! | TTTTGCAGTCACCAGGATCT+TGG | + | 55983:5739-5758 | MS.gene94916:intergenic | 45.0% |
| !! | AAGATGGTGGAGAACTTGAC+TGG | - | 55983:3909-3928 | MS.gene94916:CDS | 45.0% |
| AATCCGAGAAATGGCTAGGC+GGG | - | 55983:2698-2717 | MS.gene94916:intron | 50.0% | |
| AGCTGGCAAGAAATCAGGGA+AGG | - | 55983:4790-4809 | MS.gene94916:intron | 50.0% | |
| AGTGAATTGCGGCGGTTAGT+GGG | + | 55983:1835-1854 | MS.gene94916:intergenic | 50.0% | |
| ATTTGTCGTGCAACCGGGAT+TGG | - | 55983:2317-2336 | MS.gene94916:intron | 50.0% | |
| CAGAGAAAATCATACCGCGG+TGG | - | 55983:4543-4562 | MS.gene94916:intron | 50.0% | |
| CCAACCACTAGAAGAAGTGG+AGG | - | 55983:7073-7092 | MS.gene94916:intron | 50.0% | |
| CCTCCACTTCTTCTAGTGGT+TGG | + | 55983:7076-7095 | MS.gene94916:intergenic | 50.0% | |
| CGATGTTGCTATGACTCCGA+AGG | - | 55983:3004-3023 | MS.gene94916:intron | 50.0% | |
| CTAACCGCCGCAATTCACTA+AGG | - | 55983:1836-1855 | MS.gene94916:CDS | 50.0% | |
| CTACGGTGAGAGACCTATTC+AGG | + | 55983:6573-6592 | MS.gene94916:intergenic | 50.0% | |
| CTGAATAGGTCTCTCACCGT+AGG | - | 55983:6571-6590 | MS.gene94916:CDS | 50.0% | |
| GAAAGCTTCGGAACCAATCC+CGG | + | 55983:2333-2352 | MS.gene94916:intergenic | 50.0% | |
| GACCGTCAGGTTAATGGCTT+TGG | - | 55983:3455-3474 | MS.gene94916:intron | 50.0% | |
| GAGGAAGGCAAAAGCTAGGA+AGG | - | 55983:2467-2486 | MS.gene94916:intron | 50.0% | |
| GCAAGTTACCGGAGAGGAAT+AGG | - | 55983:4969-4988 | MS.gene94916:CDS | 50.0% | |
| GCACACAAAGAAATGGTCCC+AGG | - | 55983:4823-4842 | MS.gene94916:intron | 50.0% | |
| GGAGAGGAATAGGAGTTTCG+TGG | - | 55983:4979-4998 | MS.gene94916:CDS | 50.0% | |
| GGAGGCTAAGAAGCTAGCTA+GGG | - | 55983:2191-2210 | MS.gene94916:intron | 50.0% | |
| GGATTTGGATCGCTGGATCA+CGG | - | 55983:4913-4932 | MS.gene94916:CDS | 50.0% | |
| GGCGATGGAGAAGAAAGAGT+CGG | - | 55983:5647-5666 | MS.gene94916:CDS | 50.0% | |
| GTTCAAGGTGAGGAGGAGAA+GGG | - | 55983:2270-2289 | MS.gene94916:intron | 50.0% | |
| TAAGTGGGAACCCGCATAGA+CGG | - | 55983:6766-6785 | MS.gene94916:CDS | 50.0% | |
| TAGTGAATTGCGGCGGTTAG+TGG | + | 55983:1836-1855 | MS.gene94916:intergenic | 50.0% | |
| TCGTGGATTTGTCGTGCAAC+CGG | - | 55983:2311-2330 | MS.gene94916:intron | 50.0% | |
| TGAACCCAGCGAAGAAGGAT+GGG | - | 55983:4648-4667 | MS.gene94916:intron | 50.0% | |
| TGATGAGCAAGTTACCGGAG+AGG | - | 55983:4963-4982 | MS.gene94916:CDS | 50.0% | |
| TGGAGAACTTGACTGGATGC+AGG | - | 55983:3916-3935 | MS.gene94916:CDS | 50.0% | |
| TGGAGGCTAAGAAGCTAGCT+AGG | - | 55983:2190-2209 | MS.gene94916:intron | 50.0% | |
| TGTTCAAGGTGAGGAGGAGA+AGG | - | 55983:2269-2288 | MS.gene94916:intron | 50.0% | |
| TTCCGTGGAGAAAATTCCCG+AGG | - | 55983:4574-4593 | MS.gene94916:intron | 50.0% | |
| TTCTGGTACGGAACCTGGAT+TGG | - | 55983:3403-3422 | MS.gene94916:intron | 50.0% | |
| TTGAACCCAGCGAAGAAGGA+TGG | - | 55983:4647-4666 | MS.gene94916:intron | 50.0% | |
| ! | ATTGGTTCCGAAGCTTTCGG+GGG | - | 55983:2335-2354 | MS.gene94916:intron | 50.0% |
| ! | CACCGCGGTATGATTTTCTC+TGG | + | 55983:4545-4564 | MS.gene94916:intergenic | 50.0% |
| ! | CGCTGGGTTCAAATTTCTGG+TGG | + | 55983:4639-4658 | MS.gene94916:intergenic | 50.0% |
| ! | GATTGGTTCCGAAGCTTTCG+GGG | - | 55983:2334-2353 | MS.gene94916:intron | 50.0% |
| ! | TCGGGAATTTTCTCCACGGA+AGG | + | 55983:4575-4594 | MS.gene94916:intergenic | 50.0% |
| ! | TCTACGGAGACACCGGTTAT+AGG | - | 55983:2534-2553 | MS.gene94916:intron | 50.0% |
| !! | GGATTGGTTCCGAAGCTTTC+GGG | - | 55983:2333-2352 | MS.gene94916:intron | 50.0% |
| !! | GGGATTGGTTCCGAAGCTTT+CGG | - | 55983:2332-2351 | MS.gene94916:intron | 50.0% |
| AGCAGGCAACTCAGGTGACA+TGG | + | 55983:6890-6909 | MS.gene94916:intergenic | 55.0% | |
| CCTTCCCATCCTTCTTCGCT+GGG | + | 55983:4655-4674 | MS.gene94916:intergenic | 55.0% | |
| CGTGGATTTGTCGTGCAACC+GGG | - | 55983:2312-2331 | MS.gene94916:intron | 55.0% | |
| CTAGCTAGGGAGATGGAGAG+TGG | - | 55983:2204-2223 | MS.gene94916:intron | 55.0% | |
| GGCACGGGAAATTGAAGGTG+GGG | - | 55983:2719-2738 | MS.gene94916:intron | 55.0% | |
| GGGCACGGGAAATTGAAGGT+GGG | - | 55983:2718-2737 | MS.gene94916:intron | 55.0% | |
| TCCTTCCCATCCTTCTTCGC+TGG | + | 55983:4656-4675 | MS.gene94916:intergenic | 55.0% | |
| TCGGGAAGGATTTGGATCGC+TGG | - | 55983:4906-4925 | MS.gene94916:CDS | 55.0% | |
| ! | CTCTGGTGTTGAACCTGGAG+TGG | - | 55983:3658-3677 | MS.gene94916:intron | 55.0% |
| ! | GGCCTCGGGAATTTTCTCCA+CGG | + | 55983:4579-4598 | MS.gene94916:intergenic | 55.0% |
| ! | TGAGACCGCTTTAGACCGTC+AGG | - | 55983:3442-3461 | MS.gene94916:intron | 55.0% |
| ACGGAAGGTCCTTTCCACCG+CGG | + | 55983:4560-4579 | MS.gene94916:intergenic | 60.0% | |
| AGAAATGGCTAGGCGGGCAC+GGG | - | 55983:2704-2723 | MS.gene94916:intron | 60.0% | |
| AGGCGGGCACGGGAAATTGA+AGG | - | 55983:2714-2733 | MS.gene94916:intron | 60.0% | |
| CCCAGCGAAGAAGGATGGGA+AGG | - | 55983:4652-4671 | MS.gene94916:intron | 60.0% | |
| CGGGCACGGGAAATTGAAGG+TGG | - | 55983:2717-2736 | MS.gene94916:intron | 60.0% | |
| CGTTGTTGCACGGCCTCCTA+AGG | - | 55983:5814-5833 | MS.gene94916:CDS | 60.0% | |
| GAGAAATGGCTAGGCGGGCA+CGG | - | 55983:2703-2722 | MS.gene94916:intron | 60.0% | |
| GTGCCCGCCTAGCCATTTCT+CGG | + | 55983:2704-2723 | MS.gene94916:intergenic | 60.0% | |
| GTTCCGAAGCTTTCGGGGGT+TGG | - | 55983:2339-2358 | MS.gene94916:intron | 60.0% | |
| CCGAAGCTTTCGGGGGTTGG+CGG | - | 55983:2342-2361 | MS.gene94916:intron | 65.0% | |
| CCGCCAACCCCCGAAAGCTT+CGG | + | 55983:2345-2364 | MS.gene94916:intergenic | 65.0% | |
| GCGGTGGAAAGGACCTTCCG+TGG | - | 55983:4559-4578 | MS.gene94916:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 55983 | gene | 1801 | 7210 | 1801 | ID=MS.gene94916 |
| 55983 | mRNA | 1801 | 7210 | 1801 | ID=MS.gene94916.t1;Parent=MS.gene94916 |
| 55983 | exon | 7129 | 7210 | 7129 | ID=MS.gene94916.t1.exon1;Parent=MS.gene94916.t1 |
| 55983 | CDS | 7129 | 7210 | 7129 | ID=cds.MS.gene94916.t1;Parent=MS.gene94916.t1 |
| 55983 | exon | 4875 | 7035 | 4875 | ID=MS.gene94916.t1.exon2;Parent=MS.gene94916.t1 |
| 55983 | CDS | 4875 | 7035 | 4875 | ID=cds.MS.gene94916.t1;Parent=MS.gene94916.t1 |
| 55983 | exon | 3879 | 4492 | 3879 | ID=MS.gene94916.t1.exon3;Parent=MS.gene94916.t1 |
| 55983 | CDS | 3879 | 4492 | 3879 | ID=cds.MS.gene94916.t1;Parent=MS.gene94916.t1 |
| 55983 | exon | 3176 | 3385 | 3176 | ID=MS.gene94916.t1.exon4;Parent=MS.gene94916.t1 |
| 55983 | CDS | 3176 | 3385 | 3176 | ID=cds.MS.gene94916.t1;Parent=MS.gene94916.t1 |
| 55983 | exon | 1801 | 2015 | 1801 | ID=MS.gene94916.t1.exon5;Parent=MS.gene94916.t1 |
| 55983 | CDS | 1801 | 2015 | 1801 | ID=cds.MS.gene94916.t1;Parent=MS.gene94916.t1 |
| Gene Sequence |
| Protein sequence |
