AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058845


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058845.t1 MTR_8g086630 93.487 261 16 1 2 262 58 317 1.20e-173 481
MS.gene058845.t1 MTR_4g086490 83.258 221 12 2 2 222 58 253 6.65e-113 351
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058845.t1 AT3G19810 64.516 248 80 5 14 261 75 314 4.12e-106 310
MS.gene058845.t1 AT3G19810 64.516 248 80 5 14 261 75 314 4.12e-106 310

Find 53 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAATTCAGTATGTGATTC+TGG 0.271880 4.3:-13852638 MS.gene058845:CDS
CCTCAATTTCTTCTTCTTCC+TGG 0.279746 4.3:+13857038 None:intergenic
ATGTCAATTTGTTTCTCTTC+AGG 0.284068 4.3:+13852701 None:intergenic
GTGGTTCTTCAGTGAGTAAA+AGG 0.321200 4.3:+13852852 None:intergenic
TCATCACGCTTATGTGTAAT+AGG 0.323398 4.3:-13856993 MS.gene058845:intron
ATAGTCTCTGGTTCATTAAC+AGG 0.341261 4.3:+13852830 None:intergenic
TGAAGATGCACTAATTGATT+TGG 0.358713 4.3:-13852744 MS.gene058845:CDS
TTTGCTACAGCTGCAATTGC+CGG 0.362751 4.3:+13852574 None:intergenic
AAATGCTGCAATCTTACATT+TGG 0.364408 4.3:-13857208 MS.gene058845:CDS
AAGGCACAGTGTCCTTTGAT+TGG 0.380524 4.3:-13857305 MS.gene058845:CDS
AAGAAGAAATTGAGGCTTGA+TGG 0.392126 4.3:-13857030 MS.gene058845:CDS
TGTTAATGAACCAGAGACTA+TGG 0.398499 4.3:-13852828 MS.gene058845:CDS
GAGGAAAGCTTTGGCCCACT+TGG 0.410018 4.3:-13852539 MS.gene058845:CDS
GAAGAAATTGATAAAGATGA+AGG 0.421786 4.3:-13857264 MS.gene058845:CDS
TTTGGAGTATTGCACTACTT+TGG 0.422364 4.3:-13857190 MS.gene058845:CDS
GAAGTAAAAGAGGAAAGCTT+TGG 0.436034 4.3:-13852548 MS.gene058845:CDS
GAACCAGAGACTATGGATTT+CGG 0.437471 4.3:-13852821 MS.gene058845:CDS
AGAAGAAATTGAGGCTTGAT+GGG 0.452423 4.3:-13857029 MS.gene058845:CDS
AGGCACAGTGTCCTTTGATT+GGG 0.460660 4.3:-13857304 MS.gene058845:CDS
CATGTATGCATCAAAATGTA+AGG 0.463874 4.3:-13857355 MS.gene058845:CDS
ATCTGAACCGGAGTCCCATT+CGG 0.465444 4.3:+13857075 None:intergenic
TGCACTACTTTGGAGAGGTT+AGG 0.495564 4.3:-13857180 MS.gene058845:CDS
GAGAATATGCTCTCGGCAGA+TGG 0.505785 4.3:+13852884 None:intergenic
TAGCAAAGAGGAAGTAAAAG+AGG 0.510851 4.3:-13852558 MS.gene058845:CDS
ACACCGAAATCCATAGTCTC+TGG 0.511153 4.3:+13852818 None:intergenic
ACATCAATAGAAATCTGAAC+CGG 0.521267 4.3:+13857063 None:intergenic
GAAGACAAAATTCCAACCCT+TGG 0.539761 4.3:-13852785 MS.gene058845:CDS
TGAATTCAGTATGTGATTCT+GGG 0.541883 4.3:-13852637 MS.gene058845:CDS
AAAGGACACTGTGCCTTCCT+CGG 0.545029 4.3:+13857311 None:intergenic
TTCTTCATAGTCCCAATCAA+AGG 0.549462 4.3:+13857293 None:intergenic
CCAGGAAGAAGAAGAAATTG+AGG 0.557383 4.3:-13857038 MS.gene058845:CDS
ACTTTGGAGAGGTTAGGTCT+AGG 0.558661 4.3:-13857174 MS.gene058845:CDS
TCAATTTGTTTCTCTTCAGG+AGG 0.559183 4.3:+13852704 None:intergenic
AGATTTCTATTGATGTTACC+AGG 0.564204 4.3:-13857056 MS.gene058845:CDS
AAGAAATTGATAAAGATGAA+GGG 0.573818 4.3:-13857263 MS.gene058845:CDS
TGGTTCTTCAGTGAGTAAAA+GGG 0.584264 4.3:+13852853 None:intergenic
CGTGATTTATACACCGAGGA+AGG 0.591548 4.3:-13857324 MS.gene058845:CDS
TGTGGTCAAAACTTTAACAC+CGG 0.593260 4.3:-13852593 MS.gene058845:CDS
GAACTCAGAGAATATGCTCT+CGG 0.593331 4.3:+13852877 None:intergenic
GTCTCTGGTTCATTAACAGG+TGG 0.598843 4.3:+13852833 None:intergenic
GATGAAGGGTCACCGTGGGA+AGG 0.602100 4.3:-13857249 MS.gene058845:CDS
TATATAACCGCACCTTCCCA+CGG 0.608059 4.3:+13857237 None:intergenic
GCTCTCTTAGATTTCCAAGT+GGG 0.608668 4.3:+13852525 None:intergenic
TGCTCTCTTAGATTTCCAAG+TGG 0.611043 4.3:+13852524 None:intergenic
GCGAACTACGAAAGCAGTGA+AGG 0.615142 4.3:-13857103 MS.gene058845:CDS
AGGGTCACCGTGGGAAGGTG+CGG 0.618932 4.3:-13857244 MS.gene058845:CDS
GTATGTGATTCTGGGTGCAA+AGG 0.624787 4.3:-13852629 MS.gene058845:CDS
AGTATTGCACTACTTTGGAG+AGG 0.634419 4.3:-13857185 MS.gene058845:CDS
CAATTGCAGCTGTAGCAAAG+AGG 0.644995 4.3:-13852570 MS.gene058845:CDS
TAAAGATGAAGGGTCACCGT+GGG 0.665303 4.3:-13857253 MS.gene058845:CDS
AAAGGTGCGTGCCTGAAATG+TGG 0.693871 4.3:-13852611 MS.gene058845:CDS
ATAAAGATGAAGGGTCACCG+TGG 0.749113 4.3:-13857254 MS.gene058845:CDS
TGATCGTGATTTATACACCG+AGG 0.771445 4.3:-13857328 MS.gene058845:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAATGATAATAATTA+AGG - chr4.3:13855239-13855258 MS.gene058845:intron 10.0%
!! TAATATAATATGATATAACA+GGG + chr4.3:13855768-13855787 None:intergenic 10.0%
!!! TTTTTTTTTTTTACAAGATT+GGG - chr4.3:13854140-13854159 MS.gene058845:intron 10.0%
!!! TTTTTTTTTTTTTACAAGAT+TGG - chr4.3:13854139-13854158 MS.gene058845:intron 10.0%
!! CATACTACTTTATTAAAATT+TGG - chr4.3:13855623-13855642 MS.gene058845:intron 15.0%
!! GTAATATAATATGATATAAC+AGG + chr4.3:13855769-13855788 None:intergenic 15.0%
!! TGATTAAACTAAAAACAAAT+CGG + chr4.3:13853235-13853254 None:intergenic 15.0%
!!! TTTATGATTTTTTTTCTTTC+CGG - chr4.3:13856398-13856417 MS.gene058845:intron 15.0%
!!! TTTTTTTTTTTACAAGATTG+GGG - chr4.3:13854141-13854160 MS.gene058845:intron 15.0%
!! AAGAAATTGATAAAGATGAA+GGG - chr4.3:13852602-13852621 MS.gene058845:CDS 20.0%
!! AATGTGAAACTTCAATTTAA+CGG - chr4.3:13854030-13854049 MS.gene058845:intron 20.0%
!! AGCAGTAATAAATACTATAA+AGG + chr4.3:13855203-13855222 None:intergenic 20.0%
!! ATGAAAATAGAAGAAAGAAT+TGG - chr4.3:13856808-13856827 MS.gene058845:intron 20.0%
!! TAATAAACTGAGATTGATAA+TGG + chr4.3:13856436-13856455 None:intergenic 20.0%
!! TATCATATTATATTACGTGT+TGG - chr4.3:13855773-13855792 MS.gene058845:intron 20.0%
!!! ACAACCAATATCATTTTTTT+AGG + chr4.3:13856783-13856802 None:intergenic 20.0%
!!! ATATAATATTAAGAGGTGTT+TGG + chr4.3:13855916-13855935 None:intergenic 20.0%
!!! GATTTGTTTTTAGTTTAATC+AGG - chr4.3:13853234-13853253 MS.gene058845:intron 20.0%
!!! TTAAAATTTGGAGTAATTGA+TGG - chr4.3:13855635-13855654 MS.gene058845:intron 20.0%
!!! TTCTTTCTTCTATTTTCATA+TGG + chr4.3:13856807-13856826 None:intergenic 20.0%
!!! TTCTTTCTTTTATTTTCACA+TGG + chr4.3:13856839-13856858 None:intergenic 20.0%
!!! TTTCTTATTCAGCATTTTTT+GGG + chr4.3:13853072-13853091 None:intergenic 20.0%
!!! TTTTTTTTTTACAAGATTGG+GGG - chr4.3:13854142-13854161 MS.gene058845:intron 20.0%
! AAAAAATAAGGCTTCTGTTA+TGG - chr4.3:13852735-13852754 MS.gene058845:CDS 25.0%
! AAAAATAAGGCTTCTGTTAT+GGG - chr4.3:13852736-13852755 MS.gene058845:CDS 25.0%
! AAAGTGTATTTCATTGTAGT+AGG + chr4.3:13853329-13853348 None:intergenic 25.0%
! AAATATAGACATAGAGTACA+CGG + chr4.3:13853718-13853737 None:intergenic 25.0%
! AACAGGGATATAATATTAAG+AGG + chr4.3:13855923-13855942 None:intergenic 25.0%
! AACCGATGTTTCAAAAAATA+AGG - chr4.3:13852723-13852742 MS.gene058845:CDS 25.0%
! ACAAAAACAAATTGGATTTG+AGG - chr4.3:13855045-13855064 MS.gene058845:intron 25.0%
! ACAACAATATAGTACATAAG+TGG - chr4.3:13854213-13854232 MS.gene058845:intron 25.0%
! ACAAGCTATAACTTTCTTTA+AGG + chr4.3:13853544-13853563 None:intergenic 25.0%
! ACTATAAAGGATAAACTTCA+TGG + chr4.3:13854083-13854102 None:intergenic 25.0%
! AGAGTTAAATGGAAAGATAT+AGG - chr4.3:13853966-13853985 MS.gene058845:intron 25.0%
! AGCACGACTATTTAAATATA+TGG + chr4.3:13853824-13853843 None:intergenic 25.0%
! ATATCTATTCTATACTGTGT+TGG - chr4.3:13855738-13855757 MS.gene058845:intron 25.0%
! CAAAAACAAATTGGATTTGA+GGG - chr4.3:13855046-13855065 MS.gene058845:intron 25.0%
! CAAGCTATAACTTTCTTTAA+GGG + chr4.3:13853543-13853562 None:intergenic 25.0%
! GAACGATAAAATAAATATCC+AGG + chr4.3:13856652-13856671 None:intergenic 25.0%
! GAAGAAATTGATAAAGATGA+AGG - chr4.3:13852601-13852620 MS.gene058845:CDS 25.0%
! GAATAAAGTAACAAACCAAA+AGG - chr4.3:13856744-13856763 MS.gene058845:intron 25.0%
! GCACGACTATTTAAATATAT+GGG + chr4.3:13853823-13853842 None:intergenic 25.0%
! TCTTATCTTATCTTATCACA+AGG - chr4.3:13855865-13855884 MS.gene058845:intron 25.0%
! TTCAAAAAACATAAGAGACA+GGG - chr4.3:13857187-13857206 MS.gene058845:CDS 25.0%
! TTTCAAAAAACATAAGAGAC+AGG - chr4.3:13857186-13857205 MS.gene058845:CDS 25.0%
!! AAATTGTTGTCTCCTTTTAA+AGG + chr4.3:13855313-13855332 None:intergenic 25.0%
!! AATTGTTGTCTCCTTTTAAA+GGG + chr4.3:13855312-13855331 None:intergenic 25.0%
!! ACTACAATGAAATACACTTT+TGG - chr4.3:13853329-13853348 MS.gene058845:intron 25.0%
!! TTTCTTAATGCTGTTTGAAA+TGG + chr4.3:13853297-13853316 None:intergenic 25.0%
!!! ACCACAGAAATTTTAACATT+TGG + chr4.3:13852992-13853011 None:intergenic 25.0%
!!! AGACAACAATTTTTTTCAAG+AGG - chr4.3:13855321-13855340 MS.gene058845:intron 25.0%
!!! AGCCTTATTTTTTGAAACAT+CGG + chr4.3:13852728-13852747 None:intergenic 25.0%
!!! ATAATGGATTACTATTGTTC+CGG + chr4.3:13856420-13856439 None:intergenic 25.0%
!!! ATCATCAACTGGTTTTAAAT+CGG + chr4.3:13853410-13853429 None:intergenic 25.0%
!!! CACAGAAATTTTAACATTTG+GGG + chr4.3:13852990-13853009 None:intergenic 25.0%
!!! CCACAGAAATTTTAACATTT+GGG + chr4.3:13852991-13853010 None:intergenic 25.0%
!!! CTTTCTTATTCAGCATTTTT+TGG + chr4.3:13853073-13853092 None:intergenic 25.0%
!!! GACAACAATTTTTTTCAAGA+GGG - chr4.3:13855322-13855341 MS.gene058845:intron 25.0%
!!! TTTGTTTTCGTTTTTGATAC+AGG + chr4.3:13854694-13854713 None:intergenic 25.0%
!!! TTTTTTTTTACAAGATTGGG+GGG - chr4.3:13854143-13854162 MS.gene058845:intron 25.0%
AAATAAACTCATGCTTTCAG+TGG + chr4.3:13853779-13853798 None:intergenic 30.0%
AAATGCTGCAATCTTACATT+TGG - chr4.3:13852657-13852676 MS.gene058845:CDS 30.0%
AAGTTATGCAGAAGAGAATA+TGG + chr4.3:13855992-13856011 None:intergenic 30.0%
ACAAACCAATCATATCAAGA+AGG + chr4.3:13856378-13856397 None:intergenic 30.0%
ACATCAATAGAAATCTGAAC+CGG + chr4.3:13852805-13852824 None:intergenic 30.0%
ACATCGTGACAAAAACAAAT+TGG - chr4.3:13855037-13855056 MS.gene058845:intron 30.0%
AGAAGAAATAATCTATCCTG+TGG + chr4.3:13856903-13856922 None:intergenic 30.0%
AGATTTCTATTGATGTTACC+AGG - chr4.3:13852809-13852828 MS.gene058845:CDS 30.0%
AGGTTCAAGATCAACAAATT+AGG - chr4.3:13854639-13854658 MS.gene058845:intron 30.0%
ATAAAGGATAAACTTCATGG+AGG + chr4.3:13854080-13854099 None:intergenic 30.0%
ATAGCTCAATATATGAAGCA+TGG + chr4.3:13856058-13856077 None:intergenic 30.0%
ATGAATTCAGTATGTGATTC+TGG - chr4.3:13857227-13857246 MS.gene058845:CDS 30.0%
CAAACCAATCATATCAAGAA+GGG + chr4.3:13856377-13856396 None:intergenic 30.0%
CAGGCCTAAAAAAATGATAT+TGG - chr4.3:13856776-13856795 MS.gene058845:intron 30.0%
CATGTCATACACAGTTTATT+TGG + chr4.3:13855954-13855973 None:intergenic 30.0%
CCCAAATGTTAAAATTTCTG+TGG - chr4.3:13852988-13853007 MS.gene058845:intron 30.0%
CTAACAGATTAATTCCCTTT+AGG - chr4.3:13856558-13856577 MS.gene058845:intron 30.0%
CTATACTGTGTTGTAGTAAA+GGG - chr4.3:13855812-13855831 MS.gene058845:intron 30.0%
GCATGAGTTTATTTGATATG+AGG - chr4.3:13853785-13853804 MS.gene058845:intron 30.0%
TCTATACTGTGTTGTAGTAA+AGG - chr4.3:13855811-13855830 MS.gene058845:intron 30.0%
TGAAGATGCACTAATTGATT+TGG - chr4.3:13857121-13857140 MS.gene058845:CDS 30.0%
TGAATTCAGTATGTGATTCT+GGG - chr4.3:13857228-13857247 MS.gene058845:CDS 30.0%
TGATGAGATTCACCTATAAA+CGG - chr4.3:13855492-13855511 MS.gene058845:intron 30.0%
TTATTTGGACAGGTTTAACA+GGG + chr4.3:13855939-13855958 None:intergenic 30.0%
TTCATAATAGCTTGGTAAGT+GGG + chr4.3:13853749-13853768 None:intergenic 30.0%
TTTATTTGGACAGGTTTAAC+AGG + chr4.3:13855940-13855959 None:intergenic 30.0%
TTTGAAAGAGTCCCTTTAAA+AGG - chr4.3:13855298-13855317 MS.gene058845:intron 30.0%
! AATCAACTTTTCACACTAGA+AGG + chr4.3:13855158-13855177 None:intergenic 30.0%
! ACACTGATGTTTTCTTGTTA+CGG + chr4.3:13853483-13853502 None:intergenic 30.0%
! ATGTCAATTTGTTTCTCTTC+AGG + chr4.3:13857167-13857186 None:intergenic 30.0%
! CATACTCCTACATTTTTAAC+CGG - chr4.3:13855516-13855535 MS.gene058845:intron 30.0%
! GCACAAGGTTTAAAATATGA+TGG + chr4.3:13855894-13855913 None:intergenic 30.0%
! GTTATAGCTTGTGATTATAG+TGG - chr4.3:13853552-13853571 MS.gene058845:intron 30.0%
! TCAAGAGGGTCTTATATTTA+GGG - chr4.3:13855336-13855355 MS.gene058845:intron 30.0%
! TCAATGTGATTTTCTGTTGA+AGG - chr4.3:13856949-13856968 MS.gene058845:intron 30.0%
! TGACATTTAGAGCATCAAAT+AGG - chr4.3:13854327-13854346 MS.gene058845:intron 30.0%
! TTAGTTGTAGTGTATTTTCC+TGG - chr4.3:13856631-13856650 MS.gene058845:intron 30.0%
! TTCAAGAGGGTCTTATATTT+AGG - chr4.3:13855335-13855354 MS.gene058845:intron 30.0%
! TTTTAGCAAAACTAACAGGA+CGG + chr4.3:13853146-13853165 None:intergenic 30.0%
!! TAAAGTTTTGACCACATTTC+AGG + chr4.3:13857268-13857287 None:intergenic 30.0%
!! TAATTTGTTGATCTTGAACC+TGG + chr4.3:13854640-13854659 None:intergenic 30.0%
!! TAGTTTTGCTAAAACCATGT+AGG - chr4.3:13853152-13853171 MS.gene058845:intron 30.0%
!! TTTTTCCTGGATTTGAGATT+TGG + chr4.3:13854617-13854636 None:intergenic 30.0%
!!! AGTTGTTGTTTTTTAGAGAG+AGG - chr4.3:13855096-13855115 MS.gene058845:intron 30.0%
!!! ATGGATTTCGGTGTTATTTT+TGG - chr4.3:13857056-13857075 MS.gene058845:CDS 30.0%
!!! ATGGTTTTAGCAAAACTAAC+AGG + chr4.3:13853150-13853169 None:intergenic 30.0%
!!! ATTTGTTTTTGTCACGATGT+AGG + chr4.3:13855037-13855056 None:intergenic 30.0%
!!! GGTTGTTTTTGTGGTTTTTT+GGG + chr4.3:13854180-13854199 None:intergenic 30.0%
!!! TATCATTTTTTTAGGCCTGA+CGG + chr4.3:13856775-13856794 None:intergenic 30.0%
!!! TGGATTTCGGTGTTATTTTT+GGG - chr4.3:13857057-13857076 MS.gene058845:CDS 30.0%
!!! TTTTTGAAACATCGGTTGAA+AGG + chr4.3:13852720-13852739 None:intergenic 30.0%
AAGAAGAAATTGAGGCTTGA+TGG - chr4.3:13852835-13852854 MS.gene058845:CDS 35.0%
AAGACACTATAGAACATGCA+AGG + chr4.3:13856877-13856896 None:intergenic 35.0%
AAGATCCAAATCTCAAATCC+AGG - chr4.3:13854609-13854628 MS.gene058845:intron 35.0%
AATATATGAAGCATGGAGAG+TGG + chr4.3:13856051-13856070 None:intergenic 35.0%
AATCCGAGAGAACTAGTAAA+AGG - chr4.3:13854964-13854983 MS.gene058845:intron 35.0%
AGAACCAAGCAATTAGTTGT+TGG - chr4.3:13855691-13855710 MS.gene058845:intron 35.0%
AGAAGAAATTGAGGCTTGAT+GGG - chr4.3:13852836-13852855 MS.gene058845:CDS 35.0%
AGTCGTTAAACATAGAACTC+GGG + chr4.3:13856327-13856346 None:intergenic 35.0%
ATACACTACAACTAAGCAAG+TGG + chr4.3:13856626-13856645 None:intergenic 35.0%
ATCCGAGAGAACTAGTAAAA+GGG - chr4.3:13854965-13854984 MS.gene058845:intron 35.0%
ATGCAACATTCCATGTAAAG+AGG + chr4.3:13855720-13855739 None:intergenic 35.0%
ATGGTCAATAGACCTTATAG+AGG - chr4.3:13856216-13856235 MS.gene058845:intron 35.0%
ATTGGATTTGAGGGAAGAAA+AGG - chr4.3:13855055-13855074 MS.gene058845:intron 35.0%
ATTTGAGGGAAGAAAAGGAA+AGG - chr4.3:13855060-13855079 MS.gene058845:intron 35.0%
ATTTGTCTCTCAGATCTAGT+GGG + chr4.3:13854869-13854888 None:intergenic 35.0%
CAACTTCCGGTTAAAAATGT+AGG + chr4.3:13855525-13855544 None:intergenic 35.0%
CACATTCGCAAAAGCAATAA+AGG + chr4.3:13854016-13854035 None:intergenic 35.0%
CACTTACCAAGCTATTATGA+AGG - chr4.3:13853748-13853767 MS.gene058845:intron 35.0%
CAGACCGAGTAAGAAATAAA+GGG + chr4.3:13853589-13853608 None:intergenic 35.0%
CAGTCAGCTTAAGAGTTAAA+TGG - chr4.3:13853955-13853974 MS.gene058845:intron 35.0%
CAGTCGTTAAACATAGAACT+CGG + chr4.3:13856328-13856347 None:intergenic 35.0%
CATACACAGTTTATTTGGAC+AGG + chr4.3:13855949-13855968 None:intergenic 35.0%
CATTTAACTCTTAAGCTGAC+TGG + chr4.3:13853957-13853976 None:intergenic 35.0%
CTATGAGAATTGAGAGAATG+AGG - chr4.3:13856679-13856698 MS.gene058845:intron 35.0%
CTTATGCTCTTATCATCAAC+TGG + chr4.3:13853421-13853440 None:intergenic 35.0%
CTTCATAATAGCTTGGTAAG+TGG + chr4.3:13853750-13853769 None:intergenic 35.0%
GAAGTAAAAGAGGAAAGCTT+TGG - chr4.3:13857317-13857336 MS.gene058845:CDS 35.0%
GAAGTTGAGTTTGCATTTGA+TGG - chr4.3:13855538-13855557 MS.gene058845:intron 35.0%
GCTATTATCACACCAAAATC+AGG + chr4.3:13856478-13856497 None:intergenic 35.0%
GTTGTATGTGTCTCAAAACA+TGG - chr4.3:13853204-13853223 MS.gene058845:intron 35.0%
TAGCAAAGAGGAAGTAAAAG+AGG - chr4.3:13857307-13857326 MS.gene058845:CDS 35.0%
TATCACACCAAAATCAGGTT+TGG + chr4.3:13856473-13856492 None:intergenic 35.0%
TATTTGTATCGTAGAGTCTG+AGG - chr4.3:13856186-13856205 MS.gene058845:intron 35.0%
TCAAATGCAAACTCAACTTC+CGG + chr4.3:13855538-13855557 None:intergenic 35.0%
TCAGACCGAGTAAGAAATAA+AGG + chr4.3:13853590-13853609 None:intergenic 35.0%
TCATCACGCTTATGTGTAAT+AGG - chr4.3:13852872-13852891 MS.gene058845:CDS 35.0%
TCCGTGTTAGTGAATGTTTA+GGG + chr4.3:13854253-13854272 None:intergenic 35.0%
TGGTCAATAGACCTTATAGA+GGG - chr4.3:13856217-13856236 MS.gene058845:intron 35.0%
TGGTTCTTCAGTGAGTAAAA+GGG + chr4.3:13857015-13857034 None:intergenic 35.0%
TGTATTTCATTGTAGTAGGC+AGG + chr4.3:13853325-13853344 None:intergenic 35.0%
TGTGGTCAAAACTTTAACAC+CGG - chr4.3:13857272-13857291 MS.gene058845:CDS 35.0%
TGTTAATGAACCAGAGACTA+TGG - chr4.3:13857037-13857056 MS.gene058845:CDS 35.0%
TTCAGAATGTATGGTGTAAC+TGG - chr4.3:13856251-13856270 MS.gene058845:intron 35.0%
TTCTTCATAGTCCCAATCAA+AGG + chr4.3:13852575-13852594 None:intergenic 35.0%
TTGACCCTTCTTGATATGAT+TGG - chr4.3:13856370-13856389 MS.gene058845:intron 35.0%
TTGCCATAGATTAATCCTTC+AGG - chr4.3:13852964-13852983 MS.gene058845:intron 35.0%
TTTAGCAAAACTAACAGGAC+GGG + chr4.3:13853145-13853164 None:intergenic 35.0%
! AGTGCCCTTTATTTCTTACT+CGG - chr4.3:13853582-13853601 MS.gene058845:intron 35.0%
! ATAGTCTCTGGTTCATTAAC+AGG + chr4.3:13857038-13857057 None:intergenic 35.0%
! TCAATTTGTTTCTCTTCAGG+AGG + chr4.3:13857164-13857183 None:intergenic 35.0%
! TCTATAGTGTCTTATTCCAC+AGG - chr4.3:13856884-13856903 MS.gene058845:intron 35.0%
! TGGATTTGAGATTTGGATCT+TGG + chr4.3:13854610-13854629 None:intergenic 35.0%
! TGTTTCTACTTTGCACTACA+TGG - chr4.3:13855587-13855606 MS.gene058845:intron 35.0%
!! AAACCAATTTTGGGTGTCAA+GGG + chr4.3:13853107-13853126 None:intergenic 35.0%
!! AGTAGTCTTATCGAACCTTA+TGG + chr4.3:13854531-13854550 None:intergenic 35.0%
!! GCAAGATGCAGTTTTAACAA+TGG - chr4.3:13855834-13855853 MS.gene058845:intron 35.0%
!! TTTGGAGTATTGCACTACTT+TGG - chr4.3:13852675-13852694 MS.gene058845:CDS 35.0%
!!! GGATTTCGGTGTTATTTTTG+GGG - chr4.3:13857058-13857077 MS.gene058845:CDS 35.0%
!!! GGGTTGTTTTTGTGGTTTTT+TGG + chr4.3:13854181-13854200 None:intergenic 35.0%
!!! GTTGCTTTTCTTTGGACTTA+CGG - chr4.3:13856347-13856366 MS.gene058845:intron 35.0%
!!! TAACGACTGTTGCTTTTCTT+TGG - chr4.3:13856339-13856358 MS.gene058845:intron 35.0%
!!! TTTTTGTGGTTTTTTGGGTC+AGG + chr4.3:13854175-13854194 None:intergenic 35.0%
AACCGAATTGCAAAAAGACG+TGG - chr4.3:13854302-13854321 MS.gene058845:intron 40.0%
AAGCAAGCTAAAAGCCCTTT+CGG - chr4.3:13854409-13854428 MS.gene058845:intron 40.0%
AAGTAACAAACCAAAAGGCG+TGG - chr4.3:13856749-13856768 MS.gene058845:intron 40.0%
ACAACTAAGCAAGTGGACAA+TGG + chr4.3:13856619-13856638 None:intergenic 40.0%
ACAGATCAGCAATGAAGCTA+AGG + chr4.3:13855409-13855428 None:intergenic 40.0%
ACCAAATACGAACCGAAACA+CGG - chr4.3:13854441-13854460 MS.gene058845:intron 40.0%
ATTCCAACCCTTGGAAAAAG+TGG - chr4.3:13857089-13857108 MS.gene058845:CDS 40.0%
ATTGCATCTAGACGCCTAAA+GGG + chr4.3:13856575-13856594 None:intergenic 40.0%
CCAGGAAGAAGAAGAAATTG+AGG - chr4.3:13852827-13852846 MS.gene058845:CDS 40.0%
CCTCAATTTCTTCTTCTTCC+TGG + chr4.3:13852830-13852849 None:intergenic 40.0%
GAAACCATTCATTGCAACAC+AGG + chr4.3:13853863-13853882 None:intergenic 40.0%
GAACCAGAGACTATGGATTT+CGG - chr4.3:13857044-13857063 MS.gene058845:CDS 40.0%
GAACTAGTAAAAGGGTGGTA+CGG - chr4.3:13854973-13854992 MS.gene058845:intron 40.0%
GAACTCAGAGAATATGCTCT+CGG + chr4.3:13856991-13857010 None:intergenic 40.0%
GAAGACAAAATTCCAACCCT+TGG - chr4.3:13857080-13857099 MS.gene058845:CDS 40.0%
GAAGTCTGTAACTGGTTACA+AGG + chr4.3:13853679-13853698 None:intergenic 40.0%
GACACCAACAACTAATTGCT+TGG + chr4.3:13855698-13855717 None:intergenic 40.0%
GATTTGTCTCTCAGATCTAG+TGG + chr4.3:13854870-13854889 None:intergenic 40.0%
GCCCTAAACATTCACTAACA+CGG - chr4.3:13854249-13854268 MS.gene058845:intron 40.0%
GCTCTCTTAGATTTCCAAGT+GGG + chr4.3:13857343-13857362 None:intergenic 40.0%
GTCCGTGTTAGTGAATGTTT+AGG + chr4.3:13854254-13854273 None:intergenic 40.0%
GTCGTTAAACATAGAACTCG+GGG + chr4.3:13856326-13856345 None:intergenic 40.0%
GTCTTATCGAACCTTATGGA+TGG + chr4.3:13854527-13854546 None:intergenic 40.0%
GTGGTTCTTCAGTGAGTAAA+AGG + chr4.3:13857016-13857035 None:intergenic 40.0%
GTGTAACTGGACTTAAATGC+TGG - chr4.3:13856264-13856283 MS.gene058845:intron 40.0%
GTTCAGCCTTCATAATAGCT+TGG + chr4.3:13853757-13853776 None:intergenic 40.0%
GTTGTATGACACTGAAAGCA+AGG - chr4.3:13855663-13855682 MS.gene058845:intron 40.0%
TACAGGAAGCTGAAGATTGT+TGG + chr4.3:13854677-13854696 None:intergenic 40.0%
TATTGTTGTATCACCCGTCT+CGG + chr4.3:13854202-13854221 None:intergenic 40.0%
TCATGGAGGTAGTAGATACT+GGG + chr4.3:13854066-13854085 None:intergenic 40.0%
TCGTTAAACATAGAACTCGG+GGG + chr4.3:13856325-13856344 None:intergenic 40.0%
TCTCAAATCCAGGAAAAACC+AGG - chr4.3:13854619-13854638 MS.gene058845:intron 40.0%
TGAAATGGAGCAGAAACTCT+TGG + chr4.3:13853282-13853301 None:intergenic 40.0%
TGATCAGCATGATTCCTACA+TGG + chr4.3:13853169-13853188 None:intergenic 40.0%
TGATCGTGATTTATACACCG+AGG - chr4.3:13852537-13852556 MS.gene058845:CDS 40.0%
TGCTCTCTTAGATTTCCAAG+TGG + chr4.3:13857344-13857363 None:intergenic 40.0%
TGGAACAACAAGATCTTCAC+CGG - chr4.3:13854805-13854824 MS.gene058845:intron 40.0%
TGTCCTAAAGTTGCTCGAAA+GGG + chr4.3:13854584-13854603 None:intergenic 40.0%
TTCATGGAGGTAGTAGATAC+TGG + chr4.3:13854067-13854086 None:intergenic 40.0%
TTGTCACGATGTAGGATCTT+TGG + chr4.3:13855029-13855048 None:intergenic 40.0%
! AGTATTGCACTACTTTGGAG+AGG - chr4.3:13852680-13852699 MS.gene058845:CDS 40.0%
! CAGTGAAGGATTTTCCGAAT+GGG - chr4.3:13852776-13852795 MS.gene058845:CDS 40.0%
! CTCCACGTCTTTTTGCAATT+CGG + chr4.3:13854307-13854326 None:intergenic 40.0%
! CTGATGTTTTCTTGTTACGG+AGG + chr4.3:13853480-13853499 None:intergenic 40.0%
! GTAGGAGTATGTCCGTTTAT+AGG + chr4.3:13855507-13855526 None:intergenic 40.0%
! TAGAGCATCAAATAGGCGTA+TGG - chr4.3:13854334-13854353 MS.gene058845:intron 40.0%
! TGTTTCGGTTCGTATTTGGT+TGG + chr4.3:13854441-13854460 None:intergenic 40.0%
! TTGTTGGTGTCCTCTTTACA+TGG - chr4.3:13855707-13855726 MS.gene058845:intron 40.0%
!! AACCAATTTTGGGTGTCAAG+GGG + chr4.3:13853106-13853125 None:intergenic 40.0%
!! ATCTTGAACCTGGTTTTTCC+TGG + chr4.3:13854630-13854649 None:intergenic 40.0%
!! ATTAAGAGGTGTTTGGCACA+AGG + chr4.3:13855909-13855928 None:intergenic 40.0%
!! CACCCTTTTACTAGTTCTCT+CGG + chr4.3:13854970-13854989 None:intergenic 40.0%
!! GAAACCAATTTTGGGTGTCA+AGG + chr4.3:13853108-13853127 None:intergenic 40.0%
!! TTAGCTTGCTTCGTTGTGAA+GGG + chr4.3:13854400-13854419 None:intergenic 40.0%
!! TTTAGCTTGCTTCGTTGTGA+AGG + chr4.3:13854401-13854420 None:intergenic 40.0%
!! TTTTAACATTTGGGGCCTGA+AGG + chr4.3:13852982-13853001 None:intergenic 40.0%
!!! GCGCTTAGTTTTTTAGAGAG+AGG - chr4.3:13855124-13855143 MS.gene058845:intron 40.0%
!!! TTTGTTTTGTGGGTTTGCGA+CGG + chr4.3:13854746-13854765 None:intergenic 40.0%
AAAGATCCGGCGAAACAGTA+CGG - chr4.3:13854781-13854800 MS.gene058845:intron 45.0%
AACCCCTTGACACCCAAAAT+TGG - chr4.3:13853101-13853120 MS.gene058845:intron 45.0%
AAGGCACAGTGTCCTTTGAT+TGG - chr4.3:13852560-13852579 MS.gene058845:CDS 45.0%
ACACCGAAATCCATAGTCTC+TGG + chr4.3:13857050-13857069 None:intergenic 45.0%
ACCACAAAAACAACCCGAGA+CGG - chr4.3:13854185-13854204 MS.gene058845:intron 45.0%
ACGCGACGTTTCAGAATGTA+TGG - chr4.3:13856242-13856261 MS.gene058845:intron 45.0%
AGCAAAGTGGAGGTTACTAG+TGG - chr4.3:13856150-13856169 MS.gene058845:intron 45.0%
AGCAAGCTAAAAGCCCTTTC+GGG - chr4.3:13854410-13854429 MS.gene058845:intron 45.0%
AGGAAGCTGAAGATTGTTGG+AGG + chr4.3:13854674-13854693 None:intergenic 45.0%
AGGCACAGTGTCCTTTGATT+GGG - chr4.3:13852561-13852580 MS.gene058845:CDS 45.0%
ATAAAGATGAAGGGTCACCG+TGG - chr4.3:13852611-13852630 MS.gene058845:CDS 45.0%
ATTGTTGTATCACCCGTCTC+GGG + chr4.3:13854201-13854220 None:intergenic 45.0%
CAAGGAACGAAGTCTGTAAC+TGG + chr4.3:13853687-13853706 None:intergenic 45.0%
CAATTGCAGCTGTAGCAAAG+AGG - chr4.3:13857295-13857314 MS.gene058845:CDS 45.0%
CACGATGTAGGATCTTTGGA+TGG + chr4.3:13855025-13855044 None:intergenic 45.0%
CATTGCATCTAGACGCCTAA+AGG + chr4.3:13856576-13856595 None:intergenic 45.0%
CGAGAGAACTAGTAAAAGGG+TGG - chr4.3:13854968-13854987 MS.gene058845:intron 45.0%
CGGTTCGTATTTGGTTGGAT+AGG + chr4.3:13854436-13854455 None:intergenic 45.0%
CGTGATTTATACACCGAGGA+AGG - chr4.3:13852541-13852560 MS.gene058845:CDS 45.0%
CGTTAAACATAGAACTCGGG+GGG + chr4.3:13856324-13856343 None:intergenic 45.0%
CTCGACGTCTTCAGTTACTT+TGG - chr4.3:13853441-13853460 MS.gene058845:intron 45.0%
CTGTCCTAAAGTTGCTCGAA+AGG + chr4.3:13854585-13854604 None:intergenic 45.0%
GATGTAGGATCTTTGGATGG+TGG + chr4.3:13855022-13855041 None:intergenic 45.0%
GGAAGCTGAAGATTGTTGGA+GGG + chr4.3:13854673-13854692 None:intergenic 45.0%
GGGCCTGAAGGATTAATCTA+TGG + chr4.3:13852970-13852989 None:intergenic 45.0%
GTATGTGATTCTGGGTGCAA+AGG - chr4.3:13857236-13857255 MS.gene058845:CDS 45.0%
TAAAGATGAAGGGTCACCGT+GGG - chr4.3:13852612-13852631 MS.gene058845:CDS 45.0%
TAAGACTACTACCGCCAACA+CGG - chr4.3:13854541-13854560 MS.gene058845:intron 45.0%
TAGTAAAAGGGTGGTACGGA+GGG - chr4.3:13854977-13854996 MS.gene058845:intron 45.0%
TAGTTCTCTCGGATTCTCCA+CGG + chr4.3:13854959-13854978 None:intergenic 45.0%
TATATAACCGCACCTTCCCA+CGG + chr4.3:13852631-13852650 None:intergenic 45.0%
TGAGGGAAGAAAAGGAAAGG+CGG - chr4.3:13855063-13855082 MS.gene058845:intron 45.0%
TTCGTTGTGAAGGGAGTTGT+TGG + chr4.3:13854391-13854410 None:intergenic 45.0%
TTTGCTACAGCTGCAATTGC+CGG + chr4.3:13857294-13857313 None:intergenic 45.0%
! ACTTTGGAGAGGTTAGGTCT+AGG - chr4.3:13852691-13852710 MS.gene058845:CDS 45.0%
! AGGGGAGAGGAAACCAATTT+TGG + chr4.3:13853117-13853136 None:intergenic 45.0%
! CACAACGCCAAACCTGATTT+TGG - chr4.3:13856463-13856482 MS.gene058845:intron 45.0%
! GCAGAAACTCTTGGCTAGTT+TGG + chr4.3:13853273-13853292 None:intergenic 45.0%
! GCAGTGAAGGATTTTCCGAA+TGG - chr4.3:13852775-13852794 MS.gene058845:CDS 45.0%
! GGGGAGAGGAAACCAATTTT+GGG + chr4.3:13853116-13853135 None:intergenic 45.0%
! GTATCGTAGAGTCTGAGGTT+GGG - chr4.3:13856191-13856210 MS.gene058845:intron 45.0%
! GTCTCTGGTTCATTAACAGG+TGG + chr4.3:13857035-13857054 None:intergenic 45.0%
! TCCGTGTTTCGGTTCGTATT+TGG + chr4.3:13854445-13854464 None:intergenic 45.0%
! TGCACTACTTTGGAGAGGTT+AGG - chr4.3:13852685-13852704 MS.gene058845:CDS 45.0%
! TGTATCGTAGAGTCTGAGGT+TGG - chr4.3:13856190-13856209 MS.gene058845:intron 45.0%
!!! GATCTAGTGGGTTGCTGTTT+TGG + chr4.3:13854857-13854876 None:intergenic 45.0%
!!! GTCATCGCCACTTTTTCCAA+GGG + chr4.3:13857099-13857118 None:intergenic 45.0%
!! AAAAAAATGATAATAATTAA+GGG - chr4.3:13855240-13855259 MS.gene058845:intron 5.0%
!! TAAAAAAAAAAATACTATAA+AGG + chr4.3:13854096-13854115 None:intergenic 5.0%
AAAGGACACTGTGCCTTCCT+CGG + chr4.3:13852557-13852576 None:intergenic 50.0%
AACTAACAGGACGGGAGGAT+AGG + chr4.3:13853137-13853156 None:intergenic 50.0%
ACCTTTGCGACTCCGTGTTT+CGG + chr4.3:13854456-13854475 None:intergenic 50.0%
ACGTCGCGTTTCCCTCTATA+AGG + chr4.3:13856231-13856250 None:intergenic 50.0%
ACTAACAGGACGGGAGGATA+GGG + chr4.3:13853136-13853155 None:intergenic 50.0%
AGAAAAGGAAAGGCGGTGGA+AGG - chr4.3:13855070-13855089 MS.gene058845:intron 50.0%
AGAGAGAGAGAGCAAAGTGG+AGG - chr4.3:13856140-13856159 MS.gene058845:intron 50.0%
AGCAAAACTAACAGGACGGG+AGG + chr4.3:13853142-13853161 None:intergenic 50.0%
ATCTGAACCGGAGTCCCATT+CGG + chr4.3:13852793-13852812 None:intergenic 50.0%
CAAATCCAACGAGTCACACC+AGG - chr4.3:13854884-13854903 MS.gene058845:intron 50.0%
CCAACAGCACATGAAAACCG+CGG - chr4.3:13854495-13854514 MS.gene058845:intron 50.0%
CCACAAAAACAACCCGAGAC+GGG - chr4.3:13854186-13854205 MS.gene058845:intron 50.0%
CCATTCATTGCAACACAGGC+AGG + chr4.3:13853859-13853878 None:intergenic 50.0%
CCTGCCTGTGTTGCAATGAA+TGG - chr4.3:13853856-13853875 MS.gene058845:intron 50.0%
CTAGTAAAAGGGTGGTACGG+AGG - chr4.3:13854976-13854995 MS.gene058845:intron 50.0%
CTTATGGATGGTATCTGCCG+CGG + chr4.3:13854515-13854534 None:intergenic 50.0%
GAGAATATGCTCTCGGCAGA+TGG + chr4.3:13856984-13857003 None:intergenic 50.0%
GAGAGAGAGAGAGAGCAAAG+TGG - chr4.3:13856137-13856156 MS.gene058845:intron 50.0%
GAGTACACGGCAATCAGACA+AGG + chr4.3:13853705-13853724 None:intergenic 50.0%
GATTCTCCACGGTGGTTTCT+CGG + chr4.3:13854948-13854967 None:intergenic 50.0%
GCAAAACTCGACGGAAAGGA+AGG - chr4.3:13854831-13854850 MS.gene058845:intron 50.0%
GCGAACTACGAAAGCAGTGA+AGG - chr4.3:13852762-13852781 MS.gene058845:CDS 50.0%
TAAAGTTGCTCGAAAGGGCC+AGG + chr4.3:13854579-13854598 None:intergenic 50.0%
TAGCCTGCAAGTCAGTTTGC+TGG - chr4.3:13853912-13853931 MS.gene058845:intron 50.0%
TGAAGGGAGTTGTTGGATCG+TGG + chr4.3:13854384-13854403 None:intergenic 50.0%
TGGCCCTTTCGAGCAACTTT+AGG - chr4.3:13854578-13854597 MS.gene058845:intron 50.0%
TTGGTTGGATAGGCCCGAAA+GGG + chr4.3:13854426-13854445 None:intergenic 50.0%
TTTGGTTGGATAGGCCCGAA+AGG + chr4.3:13854427-13854446 None:intergenic 50.0%
! AAAGGTGCGTGCCTGAAATG+TGG - chr4.3:13857254-13857273 MS.gene058845:CDS 50.0%
! AGCCTGCAAGTCAGTTTGCT+GGG - chr4.3:13853913-13853932 MS.gene058845:intron 50.0%
! GGATTTTCCGAATGGGACTC+CGG - chr4.3:13852783-13852802 MS.gene058845:CDS 50.0%
! GGGAGGGAAGCATATGTAAC+TGG + chr4.3:13856291-13856310 None:intergenic 50.0%
! TAGAGTCTGAGGTTGGGTGA+TGG - chr4.3:13856197-13856216 MS.gene058845:intron 50.0%
!! CGGTTTTCATGTGCTGTTGG+TGG + chr4.3:13854495-13854514 None:intergenic 50.0%
!! TTCCCAGCAAACTGACTTGC+AGG + chr4.3:13853918-13853937 None:intergenic 50.0%
!!! CGTCATCGCCACTTTTTCCA+AGG + chr4.3:13857100-13857119 None:intergenic 50.0%
!!! TCGCCACTTTTTCCAAGGGT+TGG + chr4.3:13857095-13857114 None:intergenic 50.0%
AACTCGGGGGGTGACAACAT+TGG + chr4.3:13856312-13856331 None:intergenic 55.0%
ACACGGTGCATCTACGAACC+TGG - chr4.3:13854558-13854577 MS.gene058845:intron 55.0%
ACCGAAACACGGAGTCGCAA+AGG - chr4.3:13854452-13854471 MS.gene058845:intron 55.0%
ACTCGGGGGGTGACAACATT+GGG + chr4.3:13856311-13856330 None:intergenic 55.0%
AGGACCTCGAAAACCCACCA+AGG - chr4.3:13854904-13854923 MS.gene058845:intron 55.0%
CCACAAAACAAACAGCCCGC+CGG - chr4.3:13854754-13854773 MS.gene058845:intron 55.0%
CCTCGAAAACCCACCAAGGT+CGG - chr4.3:13854908-13854927 MS.gene058845:intron 55.0%
CGCGGCAGATACCATCCATA+AGG - chr4.3:13854513-13854532 MS.gene058845:intron 55.0%
CTAACAGGACGGGAGGATAG+GGG + chr4.3:13853135-13853154 None:intergenic 55.0%
GCGTGCAAAACTCGACGGAA+AGG - chr4.3:13854827-13854846 MS.gene058845:intron 55.0%
GGGAAGAAAAGGAAAGGCGG+TGG - chr4.3:13855066-13855085 MS.gene058845:intron 55.0%
GGTTCGTAGATGCACCGTGT+TGG + chr4.3:13854558-13854577 None:intergenic 55.0%
TCGTAGATGCACCGTGTTGG+CGG + chr4.3:13854555-13854574 None:intergenic 55.0%
TTCCAGCCGTACTGTTTCGC+CGG + chr4.3:13854790-13854809 None:intergenic 55.0%
TTCTCTCGGATTCTCCACGG+TGG + chr4.3:13854956-13854975 None:intergenic 55.0%
! CCGCGGTTTTCATGTGCTGT+TGG + chr4.3:13854498-13854517 None:intergenic 55.0%
! GAGGAAAGCTTTGGCCCACT+TGG - chr4.3:13857326-13857345 MS.gene058845:CDS 55.0%
! TTCCGTCGAGTTTTGCACGC+CGG + chr4.3:13854827-13854846 None:intergenic 55.0%
! TTGGATGGTGGTGCGATGAG+TGG + chr4.3:13855010-13855029 None:intergenic 55.0%
!!! CCCGTCTCGGGTTGTTTTTG+TGG + chr4.3:13854189-13854208 None:intergenic 55.0%
!!! CGGCGGGCTGTTTGTTTTGT+GGG + chr4.3:13854756-13854775 None:intergenic 55.0%
!!! TTGGTGGGTTTTCGAGGTCC+TGG + chr4.3:13854905-13854924 None:intergenic 55.0%
ATCCGGCGAAACAGTACGGC+TGG - chr4.3:13854785-13854804 MS.gene058845:intron 60.0%
CAAAACAAACAGCCCGCCGG+CGG - chr4.3:13854757-13854776 MS.gene058845:intron 60.0%
CACCGGCGTGCAAAACTCGA+CGG - chr4.3:13854822-13854841 MS.gene058845:intron 60.0%
CGAAAACCCACCAAGGTCGG+CGG - chr4.3:13854911-13854930 MS.gene058845:intron 60.0%
GAACCTCCGAGAAACCACCG+TGG - chr4.3:13854939-13854958 MS.gene058845:intron 60.0%
GAGGTCCTGGTGTGACTCGT+TGG + chr4.3:13854892-13854911 None:intergenic 60.0%
GATGAAGGGTCACCGTGGGA+AGG - chr4.3:13852616-13852635 MS.gene058845:CDS 60.0%
GGGGGGTGACAACATTGGGA+GGG + chr4.3:13856307-13856326 None:intergenic 60.0%
TCGGTTTCGCGCTCACACGT+GGG + chr4.3:13854288-13854307 None:intergenic 60.0%
TCTCCACGGTGGTTTCTCGG+AGG + chr4.3:13854945-13854964 None:intergenic 60.0%
TTCGGTTTCGCGCTCACACG+TGG + chr4.3:13854289-13854308 None:intergenic 60.0%
TTTCGCCGGATCTTTGCCGC+CGG + chr4.3:13854776-13854795 None:intergenic 60.0%
! AACCAAAAGGCGTGGCCGTC+AGG - chr4.3:13856757-13856776 MS.gene058845:intron 60.0%
! GATGGTGGTGCGATGAGTGG+TGG + chr4.3:13855007-13855026 None:intergenic 60.0%
! GTGGTGCGATGAGTGGTGGA+AGG + chr4.3:13855003-13855022 None:intergenic 60.0%
!!! CCGACCTTGGTGGGTTTTCG+AGG + chr4.3:13854911-13854930 None:intergenic 60.0%
!!! CCGGCGGGCTGTTTGTTTTG+TGG + chr4.3:13854757-13854776 None:intergenic 60.0%
AGGACGGGAGGATAGGGGAG+AGG + chr4.3:13853130-13853149 None:intergenic 65.0%
AGGGTCACCGTGGGAAGGTG+CGG - chr4.3:13852621-13852640 MS.gene058845:CDS 65.0%
CGGGGGGTGACAACATTGGG+AGG + chr4.3:13856308-13856327 None:intergenic 65.0%
CTGTTGCCGCCGACCTTGGT+GGG + chr4.3:13854920-13854939 None:intergenic 65.0%
GGTTCTGTTGCCGCCGACCT+TGG + chr4.3:13854924-13854943 None:intergenic 65.0%
TCTGTTGCCGCCGACCTTGG+TGG + chr4.3:13854921-13854940 None:intergenic 65.0%
GCGCTCACACGTGGGTTCGC+TGG + chr4.3:13854280-13854299 None:intergenic 70.0%
! GGCCTGACGGCCACGCCTTT+TGG + chr4.3:13856762-13856781 None:intergenic 70.0%
CGCCGGATCTTTGCCGCCGG+CGG + chr4.3:13854773-13854792 None:intergenic 75.0%
GCCCGCCGGCGGCAAAGATC+CGG - chr4.3:13854768-13854787 MS.gene058845:intron 75.0%
GCCGGATCTTTGCCGCCGGC+GGG + chr4.3:13854772-13854791 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 13852511 13857376 13852511 ID=MS.gene058845
chr4.3 mRNA 13852511 13857376 13852511 ID=MS.gene058845.t1;Parent=MS.gene058845
chr4.3 exon 13856994 13857376 13856994 ID=MS.gene058845.t1.exon1;Parent=MS.gene058845.t1
chr4.3 CDS 13856994 13857376 13856994 ID=cds.MS.gene058845.t1;Parent=MS.gene058845.t1
chr4.3 exon 13852511 13852916 13852511 ID=MS.gene058845.t1.exon2;Parent=MS.gene058845.t1
chr4.3 CDS 13852511 13852916 13852511 ID=cds.MS.gene058845.t1;Parent=MS.gene058845.t1
Gene Sequence

>MS.gene058845

ATGTATGCATCAAAATGTAAGGAGAATGATCGTGATTTATACACCGAGGAAGGCACAGTGTCCTTTGATTGGGACTATGAAGAAGAAGAAGAAGAAATTGATAAAGATGAAGGGTCACCGTGGGAAGGTGCGGTTATATACAAGAGAAATGCTGCAATCTTACATTTGGAGTATTGCACTACTTTGGAGAGGTTAGGTCTAGGAAACCTTTCAACCGATGTTTCAAAAAATAAGGCTTCTGTTATGGGATTGCGAACTACGAAAGCAGTGAAGGATTTTCCGAATGGGACTCCGGTTCAGATTTCTATTGATGTTACCAGGAAGAAGAAGAAATTGAGGCTTGATGGGATTATAAAAACTGTCATCACGCTTATGTGTAATAGGTATTTTTCTATCATCTTTAACTTCTGTGTTTTTCTTTCATGATTTTACACTGTTATATATTTGTGTTTGTTGCCATAGATTAATCCTTCAGGCCCCAAATGTTAAAATTTCTGTGGTTAAAGTTAAATTGCATTTGCTGTCTATATGCATCTTGAATGTGACTGTATCTAATATCCCAAAAAATGCTGAATAAGAAAGAAGTAGATAACCCCTTGACACCCAAAATTGGTTTCCTCTCCCCTATCCTCCCGTCCTGTTAGTTTTGCTAAAACCATGTAGGAATCATGCTGATCAAAAATAAGTTGAGTTGTTGTATGTGTCTCAAAACATGGAGTAGCCGATTTGTTTTTAGTTTAATCAGGAAAAAGTTATACACCAAACTAGCCAAGAGTTTCTGCTCCATTTCAAACAGCATTAAGAAAAAAATCCTGCCTACTACAATGAAATACACTTTTGGAGTATTCTTTTTCTCTCTAATTGAAACTTTCTTAATCACTCTCTATTCTTTACATCCGATTTAAAACCAGTTGATGATAAGAGCATAAGCTCGACGTCTTCAGTTACTTTGGATGATTTGCTGTTCCTCCGTAACAAGAAAACATCAGTGTAAAAGATATTATTTCTTTCTCTCTGCATTGACAGCATCCCTTAAAGAAAGTTATAGCTTGTGATTATAGTGGTGACATGAGTGCCCTTTATTTCTTACTCGGTCTGATTTTTAACATCTAAAGCTAAGACTACTAAAGTGCTTGCTTGATTTGACAAAATTGAAAAATTGCAACCTTGTAACCAGTTACAGACTTCGTTCCTTGTCTGATTGCCGTGTACTCTATGTCTATATTTTATTACAACCCACTTACCAAGCTATTATGAAGGCTGAACCACTGAAAGCATGAGTTTATTTGATATGAGGAAAATTTATTTTCCCATATATTTAAATAGTCGTGCTAACATTCTTGTACCTGCCTGTGTTGCAATGAATGGTTTCATGTCGCACATCATTTTGAAGACAATATTTAGCCTGCAAGTCAGTTTGCTGGGAACATGTCTCTTAGTTTACCAGTCAGCTTAAGAGTTAAATGGAAAGATATAGGATCGTATGTGCTATTGTGTGCATTCCTTTATTGCTTTTGCGAATGTGAAACTTCAATTTAACGGAGTCTTCTCACCCAGTATCTACTACCTCCATGAAGTTTATCCTTTATAGTATTTTTTTTTTTATTAGTGTGAAAAGTTTTTTTTTTTTTTTTTTTTTTTACAAGATTGGGGGGCATGCACCTGACCCAAAAAACCACAAAAACAACCCGAGACGGGTGATACAACAATATAGTACATAAGTGGTATAAAAAACACAGCCCTAAACATTCACTAACACGGACAATCCAGCGAACCCACGTGTGAGCGCGAAACCGAATTGCAAAAAGACGTGGAGTGACATTTAGAGCATCAAATAGGCGTATGGATCGTCTGTCAACACAGAAACGATCCACGATCCAACAACTCCCTTCACAACGAAGCAAGCTAAAAGCCCTTTCGGGCCTATCCAACCAAATACGAACCGAAACACGGAGTCGCAAAGGTTTTGTCATCACACAATCCACCAACAGCACATGAAAACCGCGGCAGATACCATCCATAAGGTTCGATAAGACTACTACCGCCAACACGGTGCATCTACGAACCTGGCCCTTTCGAGCAACTTTAGGACAGAACCAAGATCCAAATCTCAAATCCAGGAAAAACCAGGTTCAAGATCAACAAATTAGGTCGAACAACCCTCCAACAATCTTCAGCTTCCTGTATCAAAAACGAAAACAAACAGAAACAGAAATAACGACAAAAAACAAACCGTCGCAAACCCACAAAACAAACAGCCCGCCGGCGGCAAAGATCCGGCGAAACAGTACGGCTGGAACAACAAGATCTTCACCGGCGTGCAAAACTCGACGGAAAGGAAGGCCAAAACAGCAACCCACTAGATCTGAGAGACAAATCCAACGAGTCACACCAGGACCTCGAAAACCCACCAAGGTCGGCGGCAACAGAACCTCCGAGAAACCACCGTGGAGAATCCGAGAGAACTAGTAAAAGGGTGGTACGGAGGGCCTTCCACCACTCATCGCACCACCATCCAAAGATCCTACATCGTGACAAAAACAAATTGGATTTGAGGGAAGAAAAGGAAAGGCGGTGGAAGGAAAAGTTGTTGTTTTTTAGAGAGAGGAGAGAGCGCTTAGTTTTTTAGAGAGAGGAGACGAGTCCTTCTAGTGTGAAAAGTTGATTGTAAGATCAAGTAGAACTGAATCCTTTATAGTATTTATTACTGCTTGCTCATTGATTAGAAGAAAAAAATGATAATAATTAAGGGTATTTTGATAAAGTAATAATTAATGCAGTTAAAAATTTGAAAGAGTCCCTTTAAAAGGAGACAACAATTTTTTTCAAGAGGGTCTTATATTTAGGGACAAAACTAGTACAATATTTCTAAATCTTCTCTGTTTTACATTCAGTCCTTAGCTTCATTGCTGATCTGTGATTGATTCATTGCTGTTGAGAAAACAGTACAAGTGATTTTGTCAATAATGTTATGTAATCATTGATGAGATTCACCTATAAACGGACATACTCCTACATTTTTAACCGGAAGTTGAGTTTGCATTTGATGGTTCTTTTGTCGATTTGATGATTGTTTTGTTTCTACTTTGCACTACATGGAAATGATAAAGTTCATACTACTTTATTAAAATTTGGAGTAATTGATGGCATTTGTTGTATGACACTGAAAGCAAGGATGCAAGAACCAAGCAATTAGTTGTTGGTGTCCTCTTTACATGGAATGTTGCATATCTATTCTATACTGTGTTGGATTTCCCTGTTATATCATATTATATTACGTGTTGGATGTTGCGTATCTATTCTATACTGTGTTGTAGTAAAGGGCAAGATGCAGTTTTAACAATGGAAGTTATGTCTTATCTTATCTTATCACAAGGATTCCATCATATTTTAAACCTTGTGCCAAACACCTCTTAATATTATATCCCTGTTAAACCTGTCCAAATAAACTGTGTATGACATGATACAACTCTTGCTTCCATATTCTCTTCTGCATAACTTACATAAACAGAATGTAGCGCGTACTTCTCTCTCTGTCCACTCTCCATGCTTCATATATTGAGCTATAACTAGAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAAGTGGAGGTTACTAGTGGATGTTCTGTTGTTTATTTGTATCGTAGAGTCTGAGGTTGGGTGATGGTCAATAGACCTTATAGAGGGAAACGCGACGTTTCAGAATGTATGGTGTAACTGGACTTAAATGCTGGTCCAGTTACATATGCTTCCCTCCCAATGTTGTCACCCCCCGAGTTCTATGTTTAACGACTGTTGCTTTTCTTTGGACTTACGGTTGACCCTTCTTGATATGATTGGTTTGTTTTATGATTTTTTTTCTTTCCGGAACAATAGTAATCCATTATCAATCTCAGTTTATTAAAGCTTACACAACGCCAAACCTGATTTTGGTGTGATAATAGCATGTAAGAATTCTTTGGCAGTTGTAGTAACATGATATCTCATGTATGTTTACAACAATTTCTAACAGATTAATTCCCTTTAGGCGTCTAGATGCAATGCATCACAACTACAGTCTTATCCATTGTCCACTTGCTTAGTTGTAGTGTATTTTCCTGGATATTTATTTTATCGTTCTATTATTCTATGAGAATTGAGAGAATGAGGTACTAAAAAGTGTAAACGTGTAGTTTCATGCAAGCACTTGTTGAATAAAGTAACAAACCAAAAGGCGTGGCCGTCAGGCCTAAAAAAATGATATTGGTTGTTCCATATGAAAATAGAAGAAAGAATTGGTTGTTCCATGTGAAAATAAAAGAAAGAATATTCAAACATAGTTCCTTGCATGTTCTATAGTGTCTTATTCCACAGGATAGATTATTTCTTCTACTTTCTTTTCAATCAAAATAACGTTTCAATGTGATTTTCTGTTGAAGGTGTTGCATGCCATCTGCCGAGAGCATATTCTCTGAGTTCTCCCTTTTACTCACTGAAGAACCACCTGTTAATGAACCAGAGACTATGGATTTCGGTGTTATTTTTGGGGAAGACAAAATTCCAACCCTTGGAAAAAGTGGCGATGACGATGAAGATGCACTAATTGATTTGGATGATCAATTATATTTTCCTCCTGAAGAGAAACAAATTGACATTTCAAAAAACATAAGAGACAGGGTGCATCTTGAGATTACAATGAATTCAGTATGTGATTCTGGGTGCAAAGGTGCGTGCCTGAAATGTGGTCAAAACTTTAACACCGGCAATTGCAGCTGTAGCAAAGAGGAAGTAAAAGAGGAAAGCTTTGGCCCACTTGGAAATCTAAGAGAGCAGATGCAATTGTAA

Protein sequence

>MS.gene058845.t1

MYASKCKENDRDLYTEEGTVSFDWDYEEEEEEIDKDEGSPWEGAVIYKRNAAILHLEYCTTLERLGLGNLSTDVSKNKASVMGLRTTKAVKDFPNGTPVQISIDVTRKKKKLRLDGIIKTVITLMCNRCCMPSAESIFSEFSLLLTEEPPVNEPETMDFGVIFGEDKIPTLGKSGDDDEDALIDLDDQLYFPPEEKQIDISKNIRDRVHLEITMNSVCDSGCKGACLKCGQNFNTGNCSCSKEEVKEESFGPLGNLREQMQL