Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95043.t1 | XP_013458726.1 | 96.6 | 961 | 32 | 1 | 1 | 961 | 1 | 960 | 0.00E+00 | 1902.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95043.t1 | Q9HCG7 | 38.6 | 859 | 440 | 15 | 59 | 902 | 106 | 892 | 1.3e-166 | 588.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95043.t1 | A0A072UUL4 | 96.6 | 961 | 32 | 1 | 1 | 961 | 1 | 960 | 0.0e+00 | 1902.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene036249 | MS.gene95043 | PPI |
MS.gene95043 | MS.gene32077 | PPI |
MS.gene40011 | MS.gene95043 | PPI |
MS.gene95043 | MS.gene004694 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95043.t1 | MTR_4g134760 | 97.505 | 962 | 21 | 2 | 1 | 961 | 1 | 960 | 0.0 | 1959 |
MS.gene95043.t1 | MTR_4g134760 | 98.207 | 781 | 14 | 0 | 181 | 961 | 1 | 781 | 0.0 | 1607 |
MS.gene95043.t1 | MTR_4g134760 | 98.116 | 690 | 13 | 0 | 272 | 961 | 1 | 690 | 0.0 | 1419 |
MS.gene95043.t1 | MTR_1g072720 | 51.419 | 916 | 395 | 13 | 31 | 904 | 36 | 943 | 0.0 | 886 |
MS.gene95043.t1 | MTR_1g072720 | 51.419 | 916 | 395 | 13 | 31 | 904 | 36 | 943 | 0.0 | 885 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95043.t1 | AT5G49900 | 67.394 | 963 | 301 | 6 | 6 | 961 | 1 | 957 | 0.0 | 1337 |
MS.gene95043.t1 | AT5G49900 | 67.394 | 963 | 301 | 6 | 6 | 961 | 1 | 957 | 0.0 | 1337 |
MS.gene95043.t1 | AT1G33700 | 62.260 | 938 | 333 | 9 | 29 | 953 | 10 | 939 | 0.0 | 1185 |
MS.gene95043.t1 | AT1G33700 | 62.260 | 938 | 333 | 9 | 29 | 953 | 10 | 939 | 0.0 | 1185 |
MS.gene95043.t1 | AT1G33700 | 62.260 | 938 | 333 | 9 | 29 | 953 | 10 | 939 | 0.0 | 1185 |
MS.gene95043.t1 | AT4G10060 | 60.000 | 955 | 335 | 13 | 12 | 957 | 2 | 918 | 0.0 | 1122 |
MS.gene95043.t1 | AT4G10060 | 60.000 | 955 | 335 | 13 | 12 | 957 | 2 | 918 | 0.0 | 1122 |
MS.gene95043.t1 | AT1G33700 | 63.412 | 850 | 292 | 8 | 29 | 867 | 10 | 851 | 0.0 | 1098 |
MS.gene95043.t1 | AT5G49900 | 68.391 | 696 | 213 | 3 | 272 | 961 | 1 | 695 | 0.0 | 981 |
MS.gene95043.t1 | AT3G24180 | 53.206 | 889 | 385 | 12 | 32 | 904 | 31 | 904 | 0.0 | 920 |
MS.gene95043.t1 | AT3G24180 | 53.206 | 889 | 385 | 12 | 32 | 904 | 31 | 904 | 0.0 | 920 |
Find 231 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACATATATACGTACCTTTA+TGG | 0.099246 | 8.2:-147829 | None:intergenic |
TTATATTGCAATTGCTTATA+TGG | 0.167148 | 8.2:+155872 | MS.gene95043:CDS |
GATATGCAGCTGAATAATTT+TGG | 0.177641 | 8.2:+149496 | MS.gene95043:intron |
AGCTACTCTCCTTGTAATTA+TGG | 0.181605 | 8.2:-149367 | None:intergenic |
ATTGCACATGATGCTATTAT+TGG | 0.193368 | 8.2:+154651 | MS.gene95043:CDS |
GAACTTTACTACCTGAATTC+TGG | 0.214389 | 8.2:+155091 | MS.gene95043:CDS |
TCTTCTCATGGTGTTCCTTT+AGG | 0.215555 | 8.2:+148339 | MS.gene95043:CDS |
TGCCCTGTCTTTGTTATATC+TGG | 0.218998 | 8.2:+150011 | MS.gene95043:CDS |
TTCTTTATATCTGGCTTCCC+TGG | 0.228231 | 8.2:-148799 | None:intergenic |
GGTTTCTCTTCACAAGTTAA+AGG | 0.240637 | 8.2:-148500 | None:intergenic |
ATGGCCTACTTCTTTATATC+TGG | 0.255739 | 8.2:-148808 | None:intergenic |
GGGAAACGAGGAGCTGTAAA+TGG | 0.259382 | 8.2:+156400 | MS.gene95043:CDS |
CTGGAGGAAGGGTTTATTAC+AGG | 0.269362 | 8.2:+154509 | MS.gene95043:CDS |
AGTTTGTTCTTCAGGTTTAC+AGG | 0.271227 | 8.2:+155796 | MS.gene95043:CDS |
GTCTTTGCCAATCTTCAATC+TGG | 0.274651 | 8.2:-154945 | None:intergenic |
GAAAACTGATTTGCTAAAAC+TGG | 0.279544 | 8.2:-148521 | None:intergenic |
TGGATCCAGAAGTCTATTTC+AGG | 0.293234 | 8.2:+156926 | MS.gene95043:CDS |
AGTTCATTCAAAAGGGTAAC+AGG | 0.294104 | 8.2:-155073 | None:intergenic |
CACAAGAGTTTCATCTTTCC+AGG | 0.294891 | 8.2:-155645 | None:intergenic |
GAATCCAAAGTTTGTTCTTC+AGG | 0.297782 | 8.2:+155788 | MS.gene95043:CDS |
CTCCCATTGGTTATCGTCTA+TGG | 0.306009 | 8.2:+148135 | MS.gene95043:CDS |
CAGTCCAAGCTTCCGGAGTT+TGG | 0.310319 | 8.2:-156710 | None:intergenic |
CGTCACCATCCTTGTCAAAT+TGG | 0.317306 | 8.2:-155896 | None:intergenic |
CCTCCAGGGAACTTGACTTC+AGG | 0.335725 | 8.2:-154493 | None:intergenic |
TGCATTGCCCATATGGCTAA+TGG | 0.348844 | 8.2:-156768 | None:intergenic |
TATAACCTGAAATAGACTTC+TGG | 0.351243 | 8.2:-156931 | None:intergenic |
AACTTTACTACCTGAATTCT+GGG | 0.352039 | 8.2:+155092 | MS.gene95043:CDS |
TCTCCTCCTTCAACTTTAGA+AGG | 0.354918 | 8.2:-156902 | None:intergenic |
GGTGCTGTTCCTCATGATAT+TGG | 0.358561 | 8.2:+155699 | MS.gene95043:CDS |
TGAACACTAAGTTCAAGTTT+TGG | 0.361098 | 8.2:-155588 | None:intergenic |
CCAGGAAAACATGACTGATA+TGG | 0.362330 | 8.2:+156513 | MS.gene95043:CDS |
GGTAGTAAAGTTCATTCAAA+AGG | 0.366090 | 8.2:-155081 | None:intergenic |
GCTACTCTCCTTGTAATTAT+GGG | 0.370281 | 8.2:-149366 | None:intergenic |
TTCCTTCAAGATAAAGAAAC+TGG | 0.371553 | 8.2:-155497 | None:intergenic |
GGCCAGTTTCTTTATCTTGA+AGG | 0.374193 | 8.2:+155495 | MS.gene95043:CDS |
GTAAGTTGTGGAGGTTTCCC+TGG | 0.375069 | 8.2:-147949 | None:intergenic |
TCTTTAGCAGTCCAAGCTTC+CGG | 0.375607 | 8.2:-156717 | None:intergenic |
GACCCGTGGTCTGAAGTAAA+TGG | 0.376965 | 8.2:+155729 | MS.gene95043:CDS |
CAATGCAATCACGAGAAATA+TGG | 0.384729 | 8.2:+156455 | MS.gene95043:CDS |
TTGTAATTATGGGGTATAAC+AGG | 0.385814 | 8.2:-149356 | None:intergenic |
CATGTTTCAATTCCTGATGC+TGG | 0.388402 | 8.2:-149127 | None:intergenic |
TCATGTACTGTCCATGCCCT+TGG | 0.389887 | 8.2:-149196 | None:intergenic |
TTGGTATCAAGGAAGGTTCT+TGG | 0.391628 | 8.2:+155678 | MS.gene95043:CDS |
ATAACTGATAAGTACCATTC+AGG | 0.394501 | 8.2:-154991 | None:intergenic |
GTGTTCCTTTAGGTGGTGTT+GGG | 0.394512 | 8.2:+148349 | MS.gene95043:CDS |
GTGCATAGTTTAGTTAATAT+AGG | 0.394589 | 8.2:+155285 | MS.gene95043:CDS |
TTTAGAGAAAATCCAGCATC+AGG | 0.398014 | 8.2:+149115 | MS.gene95043:intron |
TGCCCACTGCATTGCCCATA+TGG | 0.403270 | 8.2:-156775 | None:intergenic |
ATCTTCTCTTCTCCAACAAT+TGG | 0.403373 | 8.2:-156325 | None:intergenic |
TAAACCTGAAGAACAAACTT+TGG | 0.405705 | 8.2:-155792 | None:intergenic |
AAGATTAAGTACCCTTCCTT+TGG | 0.413526 | 8.2:-148180 | None:intergenic |
TGATGCTGATGTTGCCATAA+AGG | 0.413661 | 8.2:+147815 | MS.gene95043:CDS |
TCATAATGTCGAGCGAGCTT+TGG | 0.416449 | 8.2:-156807 | None:intergenic |
AGCTAATTGATCAGCTTGTA+TGG | 0.417046 | 8.2:-156168 | None:intergenic |
CTGGATCATTGTTGCAGCTA+AGG | 0.420338 | 8.2:-156494 | None:intergenic |
CTCCAGGGAACTTGACTTCA+GGG | 0.421106 | 8.2:-154492 | None:intergenic |
GGGGTATAACAGGTGAAATC+TGG | 0.423473 | 8.2:-149346 | None:intergenic |
GGTGTTCCTTTAGGTGGTGT+TGG | 0.426591 | 8.2:+148348 | MS.gene95043:CDS |
ATTGTGGGTAGCAGCACTTC+AGG | 0.426923 | 8.2:+155998 | MS.gene95043:CDS |
CTCATGCTAGGATGCCTGAT+GGG | 0.430554 | 8.2:+149802 | MS.gene95043:intron |
TATGACACATGGTCTGTATC+TGG | 0.434538 | 8.2:+155954 | MS.gene95043:CDS |
CATGTGTCATAGGTTTGATC+AGG | 0.436014 | 8.2:-155942 | None:intergenic |
TTCAATTATGATAGCAGTTG+TGG | 0.438208 | 8.2:+156131 | MS.gene95043:CDS |
ACATGCGCCCATTAGCCATA+TGG | 0.439365 | 8.2:+156760 | MS.gene95043:CDS |
CATGTACTGTCCATGCCCTT+GGG | 0.439924 | 8.2:-149195 | None:intergenic |
AGATACAGACCATGTGTCAT+AGG | 0.442430 | 8.2:-155952 | None:intergenic |
CATGTGGCATGAAATTAAAC+AGG | 0.442480 | 8.2:+150061 | MS.gene95043:CDS |
AGAAGTTTGCTCAAGCTGTC+TGG | 0.449380 | 8.2:+155841 | MS.gene95043:CDS |
TCTTTATATCTGGCTTCCCT+GGG | 0.451028 | 8.2:-148798 | None:intergenic |
CAAAACCAGGATCATCCATT+GGG | 0.452311 | 8.2:+154395 | MS.gene95043:CDS |
CCTGCATCAAAGTCTGCATA+TGG | 0.454083 | 8.2:+155438 | MS.gene95043:CDS |
CTTTCCAAACTCCGGAAGCT+TGG | 0.457462 | 8.2:+156706 | MS.gene95043:CDS |
GGAGGACAATCAGAATTTAC+TGG | 0.458343 | 8.2:+149642 | MS.gene95043:CDS |
TTCTTCAGTTCAGGAAGCAT+TGG | 0.463698 | 8.2:+148437 | MS.gene95043:intron |
AGCTCACCTTCTAAAGTTGA+AGG | 0.465658 | 8.2:+156896 | MS.gene95043:CDS |
GCATTGCCCATATGGCTAAT+GGG | 0.470463 | 8.2:-156767 | None:intergenic |
CATGCGCCCATTAGCCATAT+GGG | 0.474287 | 8.2:+156761 | MS.gene95043:CDS |
TCTTTGCCAATCTTCAATCT+GGG | 0.475057 | 8.2:-154944 | None:intergenic |
ACTTGAACTTAGTGTTCAAA+GGG | 0.475209 | 8.2:+155593 | MS.gene95043:CDS |
TGCGTATAGTGGTGGATTGT+GGG | 0.476030 | 8.2:+155983 | MS.gene95043:CDS |
CTGTAATAAACCCTTCCTCC+AGG | 0.476382 | 8.2:-154508 | None:intergenic |
TTCTGAGACATGAACATGTT+CGG | 0.477944 | 8.2:-149988 | None:intergenic |
AGCACACCATGCACCCCATC+AGG | 0.478586 | 8.2:-149816 | None:intergenic |
GTGTGCATTCAGAATTCTGT+TGG | 0.480309 | 8.2:+149621 | MS.gene95043:intron |
CAGGAATTGAAACATGGGAT+TGG | 0.480599 | 8.2:+149134 | MS.gene95043:CDS |
TGGATTAAGGTTGTTGACCC+AGG | 0.480995 | 8.2:+147931 | MS.gene95043:intron |
TGCCCTGAAGTCAAGTTCCC+TGG | 0.483440 | 8.2:+154490 | MS.gene95043:CDS |
TCTTCAGGTTTACAGGGATG+TGG | 0.485017 | 8.2:+155803 | MS.gene95043:CDS |
TACAGGGATGTGGTTGCCAC+TGG | 0.485316 | 8.2:+155813 | MS.gene95043:CDS |
GCATGGTCTAGTGATGGTCT+CGG | 0.487694 | 8.2:+156568 | MS.gene95043:CDS |
ATAAATGTTGGCAGGAAAGA+TGG | 0.487757 | 8.2:+147746 | None:intergenic |
GAGTAAGTCTTCTCCAAGAA+GGG | 0.489356 | 8.2:+155460 | MS.gene95043:CDS |
GAACCAGATATAACAAAGAC+AGG | 0.489794 | 8.2:-150014 | None:intergenic |
AATCATCTCTTTGAAAGATA+AGG | 0.491279 | 8.2:-148025 | None:intergenic |
GTGCGTATAGTGGTGGATTG+TGG | 0.492982 | 8.2:+155982 | MS.gene95043:CDS |
CTAAAGTTGAAGGAGGAGAC+TGG | 0.493503 | 8.2:+156906 | MS.gene95043:CDS |
ACTCTTGTGTGATGGACAAT+TGG | 0.494421 | 8.2:+155659 | MS.gene95043:CDS |
CAGGAAATCTCTTGTCCTCA+AGG | 0.495256 | 8.2:-154972 | None:intergenic |
TGGCAGCTTCTTCACGAACA+TGG | 0.498458 | 8.2:-148160 | None:intergenic |
ATACAAGCTGATCAATTAGC+TGG | 0.499352 | 8.2:+156170 | MS.gene95043:CDS |
AACTTGAACTTAGTGTTCAA+AGG | 0.499425 | 8.2:+155592 | MS.gene95043:CDS |
AGGACAAGAGATTTCCTGAA+TGG | 0.500451 | 8.2:+154977 | MS.gene95043:CDS |
GTCTCCAACCTCATGTGCTA+AGG | 0.502611 | 8.2:-156030 | None:intergenic |
ATCAATCCATAAATGTTGGC+AGG | 0.502657 | 8.2:+147738 | None:intergenic |
GTTACATGACGCTTAGCAAA+AGG | 0.503532 | 8.2:-148315 | None:intergenic |
CGCTGCCACGTAAGTTGTGG+AGG | 0.506213 | 8.2:-147958 | None:intergenic |
ATAATCTTTATAATACAGAT+AGG | 0.506994 | 8.2:+155754 | MS.gene95043:CDS |
TCAAAACCAGGATCATCCAT+TGG | 0.508472 | 8.2:+154394 | MS.gene95043:CDS |
GCAGTACTGATGCATGATCC+TGG | 0.513335 | 8.2:+155627 | MS.gene95043:CDS |
CGCCATAGACGATAACCAAT+GGG | 0.513371 | 8.2:-148137 | None:intergenic |
ACATGGGATTGGAATATGAA+TGG | 0.513380 | 8.2:+149145 | MS.gene95043:CDS |
GACATGTCAACATTCCCATC+AGG | 0.520071 | 8.2:-156430 | None:intergenic |
TATTCAAGCGTACTATGCCC+AGG | 0.520326 | 8.2:+148781 | MS.gene95043:CDS |
TCTCATGGTGTTCCTTTAGG+TGG | 0.521227 | 8.2:+148342 | MS.gene95043:CDS |
CTTAGCTGCAACAATGATCC+AGG | 0.521713 | 8.2:+156495 | MS.gene95043:CDS |
CAGCATCAGGAATTGAAACA+TGG | 0.526613 | 8.2:+149128 | MS.gene95043:CDS |
CAATCACGAGAAATATGGTC+AGG | 0.527149 | 8.2:+156460 | MS.gene95043:CDS |
AGCACATGAGGTTGGAGACA+AGG | 0.527943 | 8.2:+156034 | MS.gene95043:CDS |
TTGCGCTGCCACGTAAGTTG+TGG | 0.532147 | 8.2:-147961 | None:intergenic |
AATCTCTTGTCCTCAAGGAT+TGG | 0.532991 | 8.2:-154967 | None:intergenic |
GGAAACGAGGAGCTGTAAAT+GGG | 0.534811 | 8.2:+156401 | MS.gene95043:CDS |
GGGAGTCCCAGATTGAAGAT+TGG | 0.537150 | 8.2:+154938 | MS.gene95043:CDS |
GGAGTAAGTCTTCTCCAAGA+AGG | 0.537592 | 8.2:+155459 | MS.gene95043:CDS |
TGCAGGTATGCTAGAGCATG+TGG | 0.537618 | 8.2:+156295 | MS.gene95043:intron |
AAAGATAAGGTGAATTCCGA+TGG | 0.538626 | 8.2:-148012 | None:intergenic |
GTTATATCTGGTTCTCACGA+GGG | 0.540028 | 8.2:+150023 | MS.gene95043:CDS |
GTGAAGAAGCTGCCAAAGGA+AGG | 0.540272 | 8.2:+148168 | MS.gene95043:CDS |
AGCTGCAATTGCAAATGTGA+CGG | 0.546271 | 8.2:-149958 | None:intergenic |
CATGGTCTAGTGATGGTCTC+GGG | 0.546754 | 8.2:+156569 | MS.gene95043:CDS |
ACCCACCCAACACCACCTAA+AGG | 0.546866 | 8.2:-148354 | None:intergenic |
TTACAGGTCAATTTCAGCGT+TGG | 0.546996 | 8.2:+148468 | MS.gene95043:CDS |
CAGTTATTCTTTCCAAACTC+CGG | 0.549508 | 8.2:+156698 | MS.gene95043:intron |
AAGTCAAGTTCCCTGGAGGA+AGG | 0.550116 | 8.2:+154497 | MS.gene95043:CDS |
TATATGACTTTACTTGCAAG+AGG | 0.552672 | 8.2:+156952 | MS.gene95043:CDS |
CGTCATGTAACTTCTTCTCA+TGG | 0.553671 | 8.2:+148327 | MS.gene95043:CDS |
ACACCTGTGCCTTCAAAACC+AGG | 0.554288 | 8.2:+154382 | MS.gene95043:CDS |
TGTTATATCTGGTTCTCACG+AGG | 0.555097 | 8.2:+150022 | MS.gene95043:CDS |
GCTGCCCCAATGGATGATCC+TGG | 0.555639 | 8.2:-154400 | None:intergenic |
ATGGACCAATTTGACAAGGA+TGG | 0.556149 | 8.2:+155891 | MS.gene95043:CDS |
CCATATGCAGACTTTGATGC+AGG | 0.556702 | 8.2:-155438 | None:intergenic |
GTAGTAAAGTTCATTCAAAA+GGG | 0.558497 | 8.2:-155080 | None:intergenic |
GCTGCAATTGCAAATGTGAC+GGG | 0.559690 | 8.2:-149957 | None:intergenic |
TGCAAATGCAAATGTTCCAT+CGG | 0.560180 | 8.2:+147996 | MS.gene95043:CDS |
TGCTGCAATAGCTGCCCCAA+TGG | 0.561374 | 8.2:-154410 | None:intergenic |
AGGATGCCTGATGGGGTGCA+TGG | 0.561500 | 8.2:+149810 | MS.gene95043:intron |
TAAGTTGTGGAGGTTTCCCT+GGG | 0.562219 | 8.2:-147948 | None:intergenic |
GAAGATTAGAAGTGCACTTG+AGG | 0.562341 | 8.2:+156342 | MS.gene95043:CDS |
CGCGTCAGCCTTAGCACATG+AGG | 0.562940 | 8.2:+156022 | MS.gene95043:CDS |
GGATTAAGGTTGTTGACCCA+GGG | 0.563667 | 8.2:+147932 | MS.gene95043:intron |
ACGTTATGAAAGTGAAGGGT+GGG | 0.565450 | 8.2:+156380 | MS.gene95043:CDS |
GTTTGTTCTTCAGGTTTACA+GGG | 0.567980 | 8.2:+155797 | MS.gene95043:CDS |
GATTAGAAGTGCACTTGAGG+TGG | 0.569309 | 8.2:+156345 | MS.gene95043:CDS |
GCAATTGCAATATAAACAGA+TGG | 0.574141 | 8.2:-155864 | None:intergenic |
GATATGGCATTTCAAACTGC+TGG | 0.574183 | 8.2:+156529 | MS.gene95043:CDS |
CATATCATGCATTATACCCA+AGG | 0.575550 | 8.2:+149179 | MS.gene95043:CDS |
AGCAAACTTCTTGTCACCAG+TGG | 0.578708 | 8.2:-155829 | None:intergenic |
AGTCAAGTTCCCTGGAGGAA+GGG | 0.579528 | 8.2:+154498 | MS.gene95043:CDS |
TGTAATAAACCCTTCCTCCA+GGG | 0.581327 | 8.2:-154507 | None:intergenic |
TAGCCATATGGGCAATGCAG+TGG | 0.582269 | 8.2:+156772 | MS.gene95043:CDS |
ACATTACGCTGAGCATCAGA+TGG | 0.582710 | 8.2:-154445 | None:intergenic |
GTGATGGACAATTGGTATCA+AGG | 0.587742 | 8.2:+155667 | MS.gene95043:CDS |
TCTCATGCTAGGATGCCTGA+TGG | 0.588251 | 8.2:+149801 | MS.gene95043:intron |
TCAGCCTTAGCACATGAGGT+TGG | 0.589447 | 8.2:+156026 | MS.gene95043:CDS |
AGCCATATGGGCAATGCAGT+GGG | 0.592770 | 8.2:+156773 | MS.gene95043:CDS |
GTGTTTCAGTAAAATTCAGA+TGG | 0.594344 | 8.2:-154363 | None:intergenic |
ATGCATTATACCCAAGGGCA+TGG | 0.597114 | 8.2:+149185 | MS.gene95043:CDS |
GCACATGAGGTTGGAGACAA+GGG | 0.597566 | 8.2:+156035 | MS.gene95043:CDS |
CAGCAGCAGAAGAGTTGTTG+TGG | 0.597928 | 8.2:-147794 | None:intergenic |
ATGGCATTTCAAACTGCTGG+TGG | 0.598083 | 8.2:+156532 | MS.gene95043:CDS |
AGCCATTTACTTCAGACCAC+GGG | 0.600886 | 8.2:-155731 | None:intergenic |
TGTTATACCCCATAATTACA+AGG | 0.602139 | 8.2:+149358 | MS.gene95043:CDS |
CTTTACTACCTGAATTCTGG+GGG | 0.604887 | 8.2:+155094 | MS.gene95043:CDS |
GCGCCATAGACGATAACCAA+TGG | 0.605451 | 8.2:-148138 | None:intergenic |
ATTATGTCTAGATCCCATGC+TGG | 0.605498 | 8.2:+156861 | MS.gene95043:CDS |
AGCATCAGGAATTGAAACAT+GGG | 0.607629 | 8.2:+149129 | MS.gene95043:CDS |
TGGACAATTGGTATCAAGGA+AGG | 0.608068 | 8.2:+155671 | MS.gene95043:CDS |
CTACTCTCCTTGTAATTATG+GGG | 0.608714 | 8.2:-149365 | None:intergenic |
TAACAACGTTATGAAAGTGA+AGG | 0.608841 | 8.2:+156375 | MS.gene95043:CDS |
AACAACGTTATGAAAGTGAA+GGG | 0.612047 | 8.2:+156376 | MS.gene95043:CDS |
TATGCAGACTTTGATGCAGG+TGG | 0.613227 | 8.2:-155435 | None:intergenic |
AAGATGAAACTCTTGTGTGA+TGG | 0.614265 | 8.2:+155651 | MS.gene95043:CDS |
AACGTTATGAAAGTGAAGGG+TGG | 0.614586 | 8.2:+156379 | MS.gene95043:CDS |
TGAAGAAGCTGCCAAAGGAA+GGG | 0.616650 | 8.2:+148169 | MS.gene95043:CDS |
GTTCATTCAAAAGGGTAACA+GGG | 0.620778 | 8.2:-155072 | None:intergenic |
CAAGAAGGGGAAGAAAACAT+TGG | 0.621871 | 8.2:+155474 | MS.gene95043:CDS |
ATATTAACTAAACTATGCAC+AGG | 0.622452 | 8.2:-155282 | None:intergenic |
TCATGCTAGGATGCCTGATG+GGG | 0.622952 | 8.2:+149803 | MS.gene95043:intron |
TGCATTCAGAATTCTGTTGG+AGG | 0.623578 | 8.2:+149624 | MS.gene95043:intron |
ATCAGAAATGAATCCATCCA+AGG | 0.623678 | 8.2:-155322 | None:intergenic |
TTGTATTTGCTCAACTACTG+TGG | 0.625108 | 8.2:-155409 | None:intergenic |
TAGCCATTTACTTCAGACCA+CGG | 0.625843 | 8.2:-155732 | None:intergenic |
CTGATCAAACCTATGACACA+TGG | 0.628166 | 8.2:+155943 | MS.gene95043:CDS |
AAGGGCATGGACAGTACATG+AGG | 0.628910 | 8.2:+149198 | MS.gene95043:CDS |
GTATCTCAGCGAAGGACATG+TGG | 0.629934 | 8.2:+150045 | MS.gene95043:CDS |
CAATTTGACAAGGATGGTGA+CGG | 0.631917 | 8.2:+155897 | MS.gene95043:CDS |
CTGATCAATTAGCTGGACAA+TGG | 0.631978 | 8.2:+156177 | MS.gene95043:CDS |
TGGCATTTCAAACTGCTGGT+GGG | 0.633737 | 8.2:+156533 | MS.gene95043:CDS |
TCACGAGGGTATCTCAGCGA+AGG | 0.634127 | 8.2:+150037 | MS.gene95043:CDS |
TCACCTTCTAAAGTTGAAGG+AGG | 0.634605 | 8.2:+156899 | MS.gene95043:CDS |
TTATATGGACCAATTTGACA+AGG | 0.635555 | 8.2:+155887 | MS.gene95043:CDS |
GACGGAATGATTGAGAATGA+AGG | 0.637589 | 8.2:+155915 | MS.gene95043:CDS |
ATGTGTCATAGGTTTGATCA+GGG | 0.637661 | 8.2:-155941 | None:intergenic |
GGAAACCTCCACAACTTACG+TGG | 0.637742 | 8.2:+147953 | MS.gene95043:CDS |
CTCATGTGCTAAGGCTGACG+CGG | 0.639032 | 8.2:-156021 | None:intergenic |
TCTGGTGTAAGTGCGTATAG+TGG | 0.639365 | 8.2:+155972 | MS.gene95043:CDS |
TACAGTCCATGTGAAAAGCA+AGG | 0.643728 | 8.2:-149539 | None:intergenic |
ATCTTTATAATACAGATAGG+TGG | 0.643909 | 8.2:+155757 | MS.gene95043:CDS |
GTTCGTGAAGAAGCTGCCAA+AGG | 0.646721 | 8.2:+148164 | MS.gene95043:CDS |
AAGGAATCGAGTATCAAATG+TGG | 0.647406 | 8.2:+155514 | MS.gene95043:CDS |
AAAGTGAAGGGTGGGAAACG+AGG | 0.648414 | 8.2:+156388 | MS.gene95043:CDS |
ACTTTACTACCTGAATTCTG+GGG | 0.654251 | 8.2:+155093 | MS.gene95043:CDS |
GAAGCTGCATGGTCTAGTGA+TGG | 0.655500 | 8.2:+156562 | MS.gene95043:CDS |
GTGGGATATATGAAGCTGCA+TGG | 0.659862 | 8.2:+156551 | MS.gene95043:CDS |
ATTCAAGCGTACTATGCCCA+GGG | 0.662435 | 8.2:+148782 | MS.gene95043:CDS |
GGTGTAAGTGCGTATAGTGG+TGG | 0.665798 | 8.2:+155975 | MS.gene95043:CDS |
AGTAAGTCTTCTCCAAGAAG+GGG | 0.666737 | 8.2:+155461 | MS.gene95043:CDS |
ATATCATGCATTATACCCAA+GGG | 0.677181 | 8.2:+149180 | MS.gene95043:CDS |
TAATAAATCTGATGTGTACG+AGG | 0.680587 | 8.2:+156833 | MS.gene95043:CDS |
TCACTGATTCCAATATCATG+AGG | 0.687909 | 8.2:-155708 | None:intergenic |
TGATGTAGAACATTGTCAGT+GGG | 0.690773 | 8.2:+154918 | MS.gene95043:intron |
TAAATGGGATGTTACCTGAT+GGG | 0.692986 | 8.2:+156416 | MS.gene95043:CDS |
GAAGAAAATGAACAAGAACA+TGG | 0.694841 | 8.2:+147771 | MS.gene95043:CDS |
AACCAGATATAACAAAGACA+GGG | 0.697803 | 8.2:-150013 | None:intergenic |
TTGGCAAAGACCAATCCTTG+AGG | 0.699228 | 8.2:+154957 | MS.gene95043:CDS |
ATATTGGAATCAGTGACCCG+TGG | 0.701495 | 8.2:+155715 | MS.gene95043:CDS |
GTAAATGGGATGTTACCTGA+TGG | 0.701672 | 8.2:+156415 | MS.gene95043:CDS |
CCTGAAGTCAAGTTCCCTGG+AGG | 0.702199 | 8.2:+154493 | MS.gene95043:CDS |
AGGGCATGGACAGTACATGA+GGG | 0.704483 | 8.2:+149199 | MS.gene95043:CDS |
AAAACCAGGATCATCCATTG+GGG | 0.713022 | 8.2:+154396 | MS.gene95043:CDS |
GTGATGTAGAACATTGTCAG+TGG | 0.718010 | 8.2:+154917 | MS.gene95043:intron |
TTTACTACCTGAATTCTGGG+GGG | 0.733229 | 8.2:+155095 | MS.gene95043:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 147750 | 156986 | 147750 | ID=MS.gene95043 |
chr8.2 | mRNA | 147750 | 156986 | 147750 | ID=MS.gene95043.t1;Parent=MS.gene95043 |
chr8.2 | exon | 147750 | 147836 | 147750 | ID=MS.gene95043.t1.exon1;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 147750 | 147836 | 147750 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 147940 | 148053 | 147940 | ID=MS.gene95043.t1.exon2;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 147940 | 148053 | 147940 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 148134 | 148190 | 148134 | ID=MS.gene95043.t1.exon3;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 148134 | 148190 | 148134 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 148300 | 148370 | 148300 | ID=MS.gene95043.t1.exon4;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 148300 | 148370 | 148300 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 148445 | 148544 | 148445 | ID=MS.gene95043.t1.exon5;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 148445 | 148544 | 148445 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 148751 | 148821 | 148751 | ID=MS.gene95043.t1.exon6;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 148751 | 148821 | 148751 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 149120 | 149220 | 149120 | ID=MS.gene95043.t1.exon7;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 149120 | 149220 | 149120 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 149315 | 149415 | 149315 | ID=MS.gene95043.t1.exon8;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 149315 | 149415 | 149315 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 149505 | 149558 | 149505 | ID=MS.gene95043.t1.exon9;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 149505 | 149558 | 149505 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 149633 | 149688 | 149633 | ID=MS.gene95043.t1.exon10;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 149633 | 149688 | 149633 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 149812 | 149850 | 149812 | ID=MS.gene95043.t1.exon11;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 149812 | 149850 | 149812 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 149938 | 150082 | 149938 | ID=MS.gene95043.t1.exon12;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 149938 | 150082 | 149938 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 154349 | 154530 | 154349 | ID=MS.gene95043.t1.exon13;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 154349 | 154530 | 154349 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 154605 | 154672 | 154605 | ID=MS.gene95043.t1.exon14;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 154605 | 154672 | 154605 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 154926 | 154998 | 154926 | ID=MS.gene95043.t1.exon15;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 154926 | 154998 | 154926 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 155069 | 155130 | 155069 | ID=MS.gene95043.t1.exon16;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 155069 | 155130 | 155069 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 155271 | 156198 | 155271 | ID=MS.gene95043.t1.exon17;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 155271 | 156198 | 155271 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 156300 | 156590 | 156300 | ID=MS.gene95043.t1.exon18;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 156300 | 156590 | 156300 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
chr8.2 | exon | 156701 | 156986 | 156701 | ID=MS.gene95043.t1.exon19;Parent=MS.gene95043.t1 |
chr8.2 | CDS | 156701 | 156986 | 156701 | ID=cds.MS.gene95043.t1;Parent=MS.gene95043.t1 |
Gene Sequence |
Protein sequence |