Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95855.t1 | XP_003631000.1 | 99 | 307 | 3 | 0 | 1 | 307 | 1 | 307 | 6.50E-172 | 613.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95855.t1 | Q9LHE5 | 72.3 | 310 | 81 | 3 | 1 | 306 | 1 | 309 | 1.4e-127 | 457.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95855.t1 | G7LBI9 | 99.0 | 307 | 3 | 0 | 1 | 307 | 1 | 307 | 4.7e-172 | 613.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050574 | MS.gene95855 | 0.8354 | 1.72E-56 | -1.69E-46 |
| MS.gene055808 | MS.gene95855 | 0.847264 | 1.29E-59 | -1.69E-46 |
| MS.gene056091 | MS.gene95855 | 0.849295 | 3.54E-60 | -1.69E-46 |
| MS.gene056631 | MS.gene95855 | 0.808921 | 2.44E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene95855 | 0.851916 | 6.50E-61 | -1.69E-46 |
| MS.gene060429 | MS.gene95855 | 0.80136 | 9.34E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene95855 | 0.822157 | 2.75E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95855.t1 | MTR_8g106010 | 99.023 | 307 | 3 | 0 | 1 | 307 | 1 | 307 | 0.0 | 637 |
| MS.gene95855.t1 | MTR_8g106070 | 95.192 | 104 | 5 | 0 | 1 | 104 | 172 | 275 | 1.44e-69 | 218 |
| MS.gene95855.t1 | MTR_8g106050 | 94.737 | 76 | 4 | 0 | 102 | 177 | 17 | 92 | 1.65e-45 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95855.t1 | AT3G20000 | 72.903 | 310 | 79 | 4 | 1 | 306 | 1 | 309 | 1.35e-170 | 475 |
| MS.gene95855.t1 | AT1G50400 | 66.234 | 308 | 98 | 4 | 1 | 303 | 1 | 307 | 4.96e-147 | 416 |
| MS.gene95855.t1 | AT3G20000 | 74.370 | 238 | 59 | 2 | 70 | 306 | 2 | 238 | 5.81e-132 | 375 |
Find 71 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGATTAAGAGAGAATTTC+TGG | 0.123252 | 4.3:-1113425 | None:intergenic |
| CGTTGGGTGGAGAGGTATTT+TGG | 0.132290 | 4.3:+1116431 | MS.gene95855:CDS |
| GAATTTCTGGTTAAGCATTT+TGG | 0.195036 | 4.3:-1113412 | None:intergenic |
| TCGCTACAACACTGATAAAA+TGG | 0.287276 | 4.3:+1116492 | MS.gene95855:CDS |
| AAAGACTACAAATTTGGATT+TGG | 0.302340 | 4.3:+1119168 | MS.gene95855:CDS |
| ATCTCTAACAATGGCGACTA+TGG | 0.308328 | 4.3:+1113132 | None:intergenic |
| CCAACTGCTAACTATGAATT+CGG | 0.367648 | 4.3:+1113618 | MS.gene95855:CDS |
| TTGTCGTCGGCGGTGGGAAT+CGG | 0.375328 | 4.3:-1113160 | None:intergenic |
| GCTAGGGGCAAGTTATATTC+AGG | 0.378150 | 4.3:+1114744 | MS.gene95855:CDS |
| GACCTTCTTGTCGTCGGCGG+TGG | 0.385851 | 4.3:-1113167 | None:intergenic |
| TACAGAACACAGTTTCAAAT+GGG | 0.420179 | 4.3:+1114709 | MS.gene95855:CDS |
| TTACAGAACACAGTTTCAAA+TGG | 0.437411 | 4.3:+1114708 | MS.gene95855:CDS |
| AGAGACGTCACTGCTAGCTT+TGG | 0.445106 | 4.3:+1117650 | MS.gene95855:CDS |
| TTTGGATTTGGTTTGACCGT+TGG | 0.447555 | 4.3:+1119180 | MS.gene95855:CDS |
| GTGACAAATCATTTATCGTT+GGG | 0.449646 | 4.3:+1116415 | MS.gene95855:CDS |
| ATGGGGAATGGAGCCTTGCT+AGG | 0.464451 | 4.3:+1114727 | MS.gene95855:CDS |
| ATGAAGTTCTTCGAAGGGAA+TGG | 0.465390 | 4.3:-1113224 | None:intergenic |
| ACCTTCTTGTCGTCGGCGGT+GGG | 0.475541 | 4.3:-1113166 | None:intergenic |
| CACTTTGAAAGCAAATGCTC+AGG | 0.486791 | 4.3:+1114126 | MS.gene95855:CDS |
| CAAAAGAACCATTCCAGTGC+TGG | 0.487484 | 4.3:-1117486 | None:intergenic |
| TGAAGTTCTTCGAAGGGAAT+GGG | 0.496501 | 4.3:-1113223 | None:intergenic |
| ACAGGACAAGTTGCCAGCAC+TGG | 0.498458 | 4.3:+1117473 | MS.gene95855:CDS |
| CTGATCGACCTTCTTGTCGT+CGG | 0.501398 | 4.3:-1113173 | None:intergenic |
| TGTGACAAATCATTTATCGT+TGG | 0.503304 | 4.3:+1116414 | MS.gene95855:CDS |
| TGGGGAATGGAGCCTTGCTA+GGG | 0.504773 | 4.3:+1114728 | MS.gene95855:CDS |
| GATGATTAACTTTGATTACA+AGG | 0.509596 | 4.3:+1114518 | MS.gene95855:CDS |
| GCTGGTCAGCATCGAAAGTC+CGG | 0.511836 | 4.3:+1116454 | MS.gene95855:CDS |
| CCGAATTCATAGTTAGCAGT+TGG | 0.512475 | 4.3:-1113618 | None:intergenic |
| GGGAATGGGACAAGGAAGGT+TGG | 0.514697 | 4.3:-1113209 | None:intergenic |
| ATCTGCATCCAGGTTGCCAC+AGG | 0.518788 | 4.3:+1117455 | MS.gene95855:intron |
| TGGAATCAACCTTTCCCCTA+AGG | 0.518820 | 4.3:-1118913 | None:intergenic |
| ATAGTGCCGCCTTAGGGGAA+AGG | 0.523846 | 4.3:+1118904 | MS.gene95855:intron |
| GAATTTCATTCTTTCTGCAG+AGG | 0.535381 | 4.3:+1118982 | MS.gene95855:CDS |
| TTTGATACTCAGTGTTTCGA+TGG | 0.538232 | 4.3:+1113551 | MS.gene95855:intron |
| AGCTCTAATTTATTCTCCAA+CGG | 0.548927 | 4.3:-1119196 | None:intergenic |
| TTGGGGAGAGCTATGACTGA+TGG | 0.555017 | 4.3:+1114061 | MS.gene95855:CDS |
| TCATTTATCGTTGGGTGGAG+AGG | 0.555729 | 4.3:+1116423 | MS.gene95855:CDS |
| TCGTCGGCGGTGGGAATCGG+TGG | 0.556917 | 4.3:-1113157 | None:intergenic |
| ACACAGTTTCAAATGGGGAA+TGG | 0.557932 | 4.3:+1114715 | MS.gene95855:CDS |
| AAAAGCAGCACAAACACCAT+TGG | 0.560296 | 4.3:-1118933 | None:intergenic |
| AGGGGAAAGGTTGATTCCAA+TGG | 0.561118 | 4.3:+1118917 | MS.gene95855:CDS |
| TGTTCAGAAGGTTTCTGAGA+AGG | 0.565720 | 4.3:+1117514 | MS.gene95855:CDS |
| TTGATACTCAGTGTTTCGAT+GGG | 0.565904 | 4.3:+1113552 | MS.gene95855:intron |
| ATCATCCCTTGCGACATATG+TGG | 0.567411 | 4.3:-1114501 | None:intergenic |
| ACAAGTTGCCAGCACTGGAA+TGG | 0.569505 | 4.3:+1117478 | MS.gene95855:CDS |
| TTTGGAGGAGAGGTTAAACA+TGG | 0.573440 | 4.3:+1118955 | MS.gene95855:CDS |
| AGAAATTCTCTCTTAATCAC+AGG | 0.575821 | 4.3:+1113427 | MS.gene95855:CDS |
| CAGCATCGAAAGTCCGGTGT+AGG | 0.581073 | 4.3:+1116460 | MS.gene95855:CDS |
| TCCCACCGCCGACGACAAGA+AGG | 0.581867 | 4.3:+1113165 | MS.gene95855:CDS |
| TTCGCGATGAAGTTCTTCGA+AGG | 0.585780 | 4.3:-1113230 | None:intergenic |
| AATATAACTTGCCCCTAGCA+AGG | 0.586184 | 4.3:-1114740 | None:intergenic |
| TTATGACTACATTCTCAGAC+AGG | 0.586877 | 4.3:+1117673 | MS.gene95855:CDS |
| GAACTTCATCGATCATCCTA+AGG | 0.592870 | 4.3:+1113644 | MS.gene95855:CDS |
| CGAAGGGAATGGGACAAGGA+AGG | 0.594895 | 4.3:-1113213 | None:intergenic |
| TCGCGATGAAGTTCTTCGAA+GGG | 0.595915 | 4.3:-1113229 | None:intergenic |
| ATCGACCTTCTTGTCGTCGG+CGG | 0.596681 | 4.3:-1113170 | None:intergenic |
| GGAGAGCTATGACTGATGGA+AGG | 0.601209 | 4.3:+1114065 | MS.gene95855:CDS |
| ACAAATCATTTATCGTTGGG+TGG | 0.604461 | 4.3:+1116418 | MS.gene95855:CDS |
| GATTCCTTCTCAGTCTGCTG+AGG | 0.606124 | 4.3:+1113584 | MS.gene95855:CDS |
| TCTTCGAAGGGAATGGGACA+AGG | 0.607908 | 4.3:-1113217 | None:intergenic |
| AGTGAGCCACATATGTCGCA+AGG | 0.608954 | 4.3:+1114495 | MS.gene95855:CDS |
| GAGAGCTATGACTGATGGAA+GGG | 0.610985 | 4.3:+1114066 | MS.gene95855:CDS |
| ATAACCTCAGCAGACTGAGA+AGG | 0.616639 | 4.3:-1113588 | None:intergenic |
| AGTGCTGGCAACTTGTCCTG+TGG | 0.616700 | 4.3:-1117471 | None:intergenic |
| GTGAGCCACATATGTCGCAA+GGG | 0.643410 | 4.3:+1114496 | MS.gene95855:CDS |
| AATCAACCTTTCCCCTAAGG+CGG | 0.646753 | 4.3:-1118910 | None:intergenic |
| GACTGAGAAGGAATCTCAGT+AGG | 0.652570 | 4.3:-1113576 | None:intergenic |
| GGGGAATGGAGCCTTGCTAG+GGG | 0.654668 | 4.3:+1114729 | MS.gene95855:CDS |
| ACAGAACACAGTTTCAAATG+GGG | 0.668900 | 4.3:+1114710 | MS.gene95855:CDS |
| TTGGAGGAGAGGTTAAACAT+GGG | 0.679861 | 4.3:+1118956 | MS.gene95855:CDS |
| GCGAGCAGCATAACCTACAC+CGG | 0.690277 | 4.3:-1116473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAAATTTTTTAATT+GGG | + | chr4.3:1118577-1118596 | MS.gene95855:intron | 0.0% |
| !! | AAAAAAAAAAAAAGATGAAA+AGG | - | chr4.3:1113678-1113697 | None:intergenic | 10.0% |
| !! | AAACAAATATTATTATATCA+AGG | + | chr4.3:1115227-1115246 | MS.gene95855:intron | 10.0% |
| !! | AACAAATATTATTATATCAA+GGG | + | chr4.3:1115228-1115247 | MS.gene95855:intron | 10.0% |
| !! | ATAAAATCTAAAAGATATAT+TGG | - | chr4.3:1114236-1114255 | None:intergenic | 10.0% |
| !! | TCTCATATATTAATATAAAA+GGG | - | chr4.3:1115414-1115433 | None:intergenic | 10.0% |
| !! | TTCTCATATATTAATATAAA+AGG | - | chr4.3:1115415-1115434 | None:intergenic | 10.0% |
| !!! | TGATTATTTTAATTAGTATT+AGG | + | chr4.3:1114885-1114904 | MS.gene95855:intron | 10.0% |
| !!! | TTGAAATATTTAATTTCATT+TGG | + | chr4.3:1115989-1116008 | MS.gene95855:intron | 10.0% |
| !!! | TTTTTTGTTACAAAAATTTA+GGG | - | chr4.3:1115900-1115919 | None:intergenic | 10.0% |
| !! | ACAAATATTATTATATCAAG+GGG | + | chr4.3:1115229-1115248 | MS.gene95855:intron | 15.0% |
| !! | AGAAGAAGAAAAAATAAATA+TGG | - | chr4.3:1114792-1114811 | None:intergenic | 15.0% |
| !! | CTCATATATTAATATAAAAG+GGG | - | chr4.3:1115413-1115432 | None:intergenic | 15.0% |
| !! | TACATGAATATGAAATAATA+AGG | + | chr4.3:1117048-1117067 | MS.gene95855:intron | 15.0% |
| !! | TTATTAATATGAATAACTGA+TGG | + | chr4.3:1116078-1116097 | MS.gene95855:intron | 15.0% |
| !!! | AAATTCATTTTTAGTTTTCT+TGG | - | chr4.3:1117203-1117222 | None:intergenic | 15.0% |
| !!! | AGATAGAAATTTTTCAATAA+TGG | + | chr4.3:1115558-1115577 | MS.gene95855:intron | 15.0% |
| !!! | ATATACATTTTATGCTAAAA+AGG | - | chr4.3:1118147-1118166 | None:intergenic | 15.0% |
| !!! | CAAATAATACTTTAAGAAAA+TGG | + | chr4.3:1113749-1113768 | MS.gene95855:intron | 15.0% |
| !!! | CTTTTTTGTTACAAAAATTT+AGG | - | chr4.3:1115901-1115920 | None:intergenic | 15.0% |
| !!! | GCTTTTAAATTGAATAAAAT+CGG | - | chr4.3:1118847-1118866 | None:intergenic | 15.0% |
| !!! | TATTTTTTCTTCTTCTTTAA+GGG | + | chr4.3:1114796-1114815 | MS.gene95855:intron | 15.0% |
| !!! | TTATTTTTTCTTCTTCTTTA+AGG | + | chr4.3:1114795-1114814 | MS.gene95855:intron | 15.0% |
| !!! | TTTTTTTATTTTTGAGTGTA+CGG | + | chr4.3:1115044-1115063 | MS.gene95855:intron | 15.0% |
| !! | AAAAAAAAAGATGAAAAGGA+AGG | - | chr4.3:1113674-1113693 | None:intergenic | 20.0% |
| !! | AAAAGACTACAAATAACAAA+AGG | - | chr4.3:1114417-1114436 | None:intergenic | 20.0% |
| !! | AAAATAGGCATAAAAAAATC+TGG | - | chr4.3:1118563-1118582 | None:intergenic | 20.0% |
| !! | AAAGACTACAAATAACAAAA+GGG | - | chr4.3:1114416-1114435 | None:intergenic | 20.0% |
| !! | AAATTAGATATATAAGCAGA+GGG | - | chr4.3:1116570-1116589 | None:intergenic | 20.0% |
| !! | AAGAAAAAAGACTACAAATT+TGG | + | chr4.3:1119162-1119181 | MS.gene95855:CDS | 20.0% |
| !! | AATTGGATAATATCTATTTC+AGG | + | chr4.3:1116226-1116245 | MS.gene95855:intron | 20.0% |
| !! | ACAAATGAAATAATCAGAAA+AGG | - | chr4.3:1114556-1114575 | None:intergenic | 20.0% |
| !! | ACAATATTGAACTATAAAAC+AGG | - | chr4.3:1114671-1114690 | None:intergenic | 20.0% |
| !! | ACAGGATTATTATTAATATC+AGG | - | chr4.3:1118722-1118741 | None:intergenic | 20.0% |
| !! | ATTAACAAAGAAAGTCATTA+AGG | + | chr4.3:1114846-1114865 | MS.gene95855:intron | 20.0% |
| !! | ATTTCATGTGAGAAATAAAA+AGG | - | chr4.3:1117580-1117599 | None:intergenic | 20.0% |
| !! | CAAATATTATTATATCAAGG+GGG | + | chr4.3:1115230-1115249 | MS.gene95855:intron | 20.0% |
| !! | CAATATTGAACTATAAAACA+GGG | - | chr4.3:1114670-1114689 | None:intergenic | 20.0% |
| !! | CAGGATTATTATTAATATCA+GGG | - | chr4.3:1118721-1118740 | None:intergenic | 20.0% |
| !! | CTTTATTGAACTAATTTCTT+CGG | + | chr4.3:1113924-1113943 | MS.gene95855:intron | 20.0% |
| !! | TAAATATGAAAATCATGTCA+AGG | - | chr4.3:1119123-1119142 | None:intergenic | 20.0% |
| !! | TCATTATACTACAATAGTAA+TGG | - | chr4.3:1117107-1117126 | None:intergenic | 20.0% |
| !! | TTGTTAGAATAAATACTCAA+GGG | + | chr4.3:1117297-1117316 | MS.gene95855:intron | 20.0% |
| !! | TTTGTTAGAATAAATACTCA+AGG | + | chr4.3:1117296-1117315 | MS.gene95855:intron | 20.0% |
| !!! | AAACGTTTTTAGAAAACATA+TGG | - | chr4.3:1118365-1118384 | None:intergenic | 20.0% |
| !!! | AACAACAAAGAGTTTTAAAA+AGG | - | chr4.3:1119020-1119039 | None:intergenic | 20.0% |
| !!! | AGTTCAATATTGTATTTTTC+AGG | + | chr4.3:1114678-1114697 | MS.gene95855:intron | 20.0% |
| !!! | CAATTTTTTCATGTTATCTA+GGG | + | chr4.3:1116173-1116192 | MS.gene95855:intron | 20.0% |
| !!! | CACCTTAAGTATTTTTAAAA+TGG | - | chr4.3:1114988-1115007 | None:intergenic | 20.0% |
| !!! | GTTCAATATTGTATTTTTCA+GGG | + | chr4.3:1114679-1114698 | MS.gene95855:intron | 20.0% |
| !!! | TAAATAGTCAAGAGTATTAT+AGG | - | chr4.3:1117256-1117275 | None:intergenic | 20.0% |
| !!! | TGTTGTGTTGATATTTTAAT+TGG | + | chr4.3:1116209-1116228 | MS.gene95855:intron | 20.0% |
| !!! | TTTAAAACTCTTTGTTGTTA+GGG | + | chr4.3:1119021-1119040 | MS.gene95855:intron | 20.0% |
| !!! | TTTTAAAACTCTTTGTTGTT+AGG | + | chr4.3:1119020-1119039 | MS.gene95855:intron | 20.0% |
| !!! | TTTTTAACTGAATAGTAGTT+TGG | + | chr4.3:1115611-1115630 | MS.gene95855:intron | 20.0% |
| ! | AAAAAATTGCCCATAACAAA+CGG | - | chr4.3:1116162-1116181 | None:intergenic | 25.0% |
| ! | AAACAACTTGTGTAAAAAAC+AGG | + | chr4.3:1115311-1115330 | MS.gene95855:intron | 25.0% |
| ! | AAAGACTACAAATTTGGATT+TGG | + | chr4.3:1119168-1119187 | MS.gene95855:CDS | 25.0% |
| ! | AAATCGGTTAAATTTCATCA+CGG | - | chr4.3:1118831-1118850 | None:intergenic | 25.0% |
| ! | AACAACTTGTGTAAAAAACA+GGG | + | chr4.3:1115312-1115331 | MS.gene95855:intron | 25.0% |
| ! | ACAAATGTTGAAATCAGATA+AGG | - | chr4.3:1118872-1118891 | None:intergenic | 25.0% |
| ! | ACATTGTTCTCATCTTATAT+GGG | + | chr4.3:1117890-1117909 | MS.gene95855:intron | 25.0% |
| ! | AGATAGTAATAAGTATGCAT+GGG | - | chr4.3:1116017-1116036 | None:intergenic | 25.0% |
| ! | ATAGATATTAAATACCATGC+GGG | + | chr4.3:1116758-1116777 | MS.gene95855:intron | 25.0% |
| ! | ATATGTGTATCCATTGAAAT+TGG | - | chr4.3:1118459-1118478 | None:intergenic | 25.0% |
| ! | CATAGATATTAAATACCATG+CGG | + | chr4.3:1116757-1116776 | MS.gene95855:intron | 25.0% |
| ! | CCATTGAAATTGGAAAAATT+AGG | - | chr4.3:1118449-1118468 | None:intergenic | 25.0% |
| ! | GAAATTAGATATATAAGCAG+AGG | - | chr4.3:1116571-1116590 | None:intergenic | 25.0% |
| ! | GATGATTAACTTTGATTACA+AGG | + | chr4.3:1114518-1114537 | MS.gene95855:CDS | 25.0% |
| ! | GATTATTATGTTGTCGAATT+TGG | + | chr4.3:1118766-1118785 | MS.gene95855:intron | 25.0% |
| ! | GTATATCTCTTGTATTTCTT+CGG | + | chr4.3:1118161-1118180 | MS.gene95855:intron | 25.0% |
| ! | TAAAGCAGTACAATAGTATT+GGG | - | chr4.3:1116679-1116698 | None:intergenic | 25.0% |
| ! | TAACATTAACTTCTCTCTAA+AGG | - | chr4.3:1115812-1115831 | None:intergenic | 25.0% |
| ! | TAATAGTTACAGCTATAGAA+GGG | - | chr4.3:1117017-1117036 | None:intergenic | 25.0% |
| ! | TATATATTACTCCAAAGGTT+TGG | + | chr4.3:1115731-1115750 | MS.gene95855:intron | 25.0% |
| ! | TATATCTCTTGTATTTCTTC+GGG | + | chr4.3:1118162-1118181 | MS.gene95855:intron | 25.0% |
| ! | TATGAAGTCATTAGTAAGTT+TGG | + | chr4.3:1115706-1115725 | MS.gene95855:intron | 25.0% |
| ! | TGAAGTTATGGTGAATAAAA+AGG | - | chr4.3:1114448-1114467 | None:intergenic | 25.0% |
| ! | TGAATAGATAACAACGAAAA+AGG | - | chr4.3:1117392-1117411 | None:intergenic | 25.0% |
| ! | TGGATTATATATTACTCCAA+AGG | + | chr4.3:1115726-1115745 | MS.gene95855:intron | 25.0% |
| ! | TTGAAATGATTACTTATTGC+TGG | + | chr4.3:1114307-1114326 | MS.gene95855:intron | 25.0% |
| !! | ATACTCTAGAAAACACATAA+TGG | + | chr4.3:1118047-1118066 | MS.gene95855:intron | 25.0% |
| !! | CCTAATTTTTCCAATTTCAA+TGG | + | chr4.3:1118446-1118465 | MS.gene95855:intron | 25.0% |
| !! | GATATATTGGTAACTAATCA+AGG | - | chr4.3:1114223-1114242 | None:intergenic | 25.0% |
| !! | TCCAGATTTTCATATAAAAC+AGG | - | chr4.3:1114822-1114841 | None:intergenic | 25.0% |
| !! | TGCTCTGAATAAAATATGAA+AGG | - | chr4.3:1118244-1118263 | None:intergenic | 25.0% |
| !! | TTTATTCAGAGCAACATTTT+TGG | + | chr4.3:1118251-1118270 | MS.gene95855:intron | 25.0% |
| !!! | AAATTGTTTTACATCAGTGT+TGG | + | chr4.3:1116047-1116066 | MS.gene95855:intron | 25.0% |
| !!! | AAGGGTTCTTTTTTAGTTAA+AGG | - | chr4.3:1118679-1118698 | None:intergenic | 25.0% |
| !!! | AGGGTTCTTTTTTAGTTAAA+GGG | - | chr4.3:1118678-1118697 | None:intergenic | 25.0% |
| !!! | ATATTGTATTTTTCAGGGAA+AGG | + | chr4.3:1114684-1114703 | MS.gene95855:intron | 25.0% |
| !!! | CGCCATTTTAAAAATACTTA+AGG | + | chr4.3:1114983-1115002 | MS.gene95855:intron | 25.0% |
| !!! | GCAATTTTTTCATGTTATCT+AGG | + | chr4.3:1116172-1116191 | MS.gene95855:intron | 25.0% |
| !!! | TGTGTTTTCTAGAGTATTTT+CGG | - | chr4.3:1118044-1118063 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTAGTTTCTTAG+TGG | + | chr4.3:1114602-1114621 | MS.gene95855:intron | 25.0% |
| AAAATCCGAAAGAGAAAGTA+AGG | - | chr4.3:1113455-1113474 | None:intergenic | 30.0% | |
| AAAGGATAATTTATCTGCCA+TGG | + | chr4.3:1114334-1114353 | MS.gene95855:intron | 30.0% | |
| AAATACTTAAGGTGAGTGTA+CGG | + | chr4.3:1114994-1115013 | MS.gene95855:intron | 30.0% | |
| AAGCATGAGCACTTATTAAA+TGG | - | chr4.3:1115480-1115499 | None:intergenic | 30.0% | |
| AATAATGCATTCTTTGACCA+AGG | + | chr4.3:1114016-1114035 | MS.gene95855:intron | 30.0% | |
| AATGTTGAAATCAGATAAGG+CGG | - | chr4.3:1118869-1118888 | None:intergenic | 30.0% | |
| AATTATGTCTAACGTAAGCA+TGG | - | chr4.3:1117760-1117779 | None:intergenic | 30.0% | |
| AATTTATGGACTTGTCTATG+CGG | + | chr4.3:1115944-1115963 | MS.gene95855:intron | 30.0% | |
| ACAAATCTACAATGTGATGA+TGG | - | chr4.3:1117545-1117564 | None:intergenic | 30.0% | |
| ACCTGAAAAAATTAAGCTGA+TGG | - | chr4.3:1115970-1115989 | None:intergenic | 30.0% | |
| ACTACAAATAACAAAAGGGA+AGG | - | chr4.3:1114412-1114431 | None:intergenic | 30.0% | |
| AGAAATTCTCTCTTAATCAC+AGG | + | chr4.3:1113427-1113446 | MS.gene95855:CDS | 30.0% | |
| ATCATTAATGCTAGCACTAT+TGG | + | chr4.3:1117321-1117340 | MS.gene95855:intron | 30.0% | |
| ATGTTGTCGAATTTGGATTA+GGG | + | chr4.3:1118773-1118792 | MS.gene95855:intron | 30.0% | |
| CACATTGTTCTCATCTTATA+TGG | + | chr4.3:1117889-1117908 | MS.gene95855:intron | 30.0% | |
| CACGGTAAGCAAAATTTAAA+TGG | - | chr4.3:1118813-1118832 | None:intergenic | 30.0% | |
| CAGATAGTAATAAGTATGCA+TGG | - | chr4.3:1116018-1116037 | None:intergenic | 30.0% | |
| CATAACCAATGGTTTACAAT+TGG | - | chr4.3:1116804-1116823 | None:intergenic | 30.0% | |
| CATATAAGATGAGAACAATG+TGG | - | chr4.3:1117891-1117910 | None:intergenic | 30.0% | |
| CTAATAGTTACAGCTATAGA+AGG | - | chr4.3:1117018-1117037 | None:intergenic | 30.0% | |
| CTACAAATAACAAAAGGGAA+GGG | - | chr4.3:1114411-1114430 | None:intergenic | 30.0% | |
| CTTATCCAATTGTAAACCAT+TGG | + | chr4.3:1116796-1116815 | MS.gene95855:intron | 30.0% | |
| GATAGTAATAAGTATGCATG+GGG | - | chr4.3:1116016-1116035 | None:intergenic | 30.0% | |
| GGAAAGACAAAACTTGAAAT+TGG | - | chr4.3:1116706-1116725 | None:intergenic | 30.0% | |
| GTAAAGCAGTACAATAGTAT+TGG | - | chr4.3:1116680-1116699 | None:intergenic | 30.0% | |
| GTGACAAATCATTTATCGTT+GGG | + | chr4.3:1116415-1116434 | MS.gene95855:CDS | 30.0% | |
| TAAATTGAGAGATCATTCCA+TGG | - | chr4.3:1114354-1114373 | None:intergenic | 30.0% | |
| TACAAATAACAAAAGGGAAG+GGG | - | chr4.3:1114410-1114429 | None:intergenic | 30.0% | |
| TACAGAACACAGTTTCAAAT+GGG | + | chr4.3:1114709-1114728 | MS.gene95855:CDS | 30.0% | |
| TATGTTGTCGAATTTGGATT+AGG | + | chr4.3:1118772-1118791 | MS.gene95855:intron | 30.0% | |
| TCATTAATGCTAGCACTATT+GGG | + | chr4.3:1117322-1117341 | MS.gene95855:intron | 30.0% | |
| TCTGATTTCAACATTTGTGT+TGG | + | chr4.3:1118874-1118893 | MS.gene95855:intron | 30.0% | |
| TCTGCAATATCAATTTACAG+CGG | + | chr4.3:1118609-1118628 | MS.gene95855:intron | 30.0% | |
| TGGAGTTTCATACTCAATTA+GGG | - | chr4.3:1117871-1117890 | None:intergenic | 30.0% | |
| TGTGACAAATCATTTATCGT+TGG | + | chr4.3:1116414-1116433 | MS.gene95855:CDS | 30.0% | |
| TGTGATTAAGAGAGAATTTC+TGG | - | chr4.3:1113428-1113447 | None:intergenic | 30.0% | |
| TTACAGAACACAGTTTCAAA+TGG | + | chr4.3:1114708-1114727 | MS.gene95855:CDS | 30.0% | |
| TTCTTCTATGAATTTAGCCA+CGG | + | chr4.3:1117703-1117722 | MS.gene95855:intron | 30.0% | |
| TTTCAATGGATACACATATC+TGG | + | chr4.3:1118460-1118479 | MS.gene95855:intron | 30.0% | |
| ! | AAAGATGGATATTTCTACTC+AGG | + | chr4.3:1114932-1114951 | MS.gene95855:intron | 30.0% |
| ! | AAGATGGATATTTCTACTCA+GGG | + | chr4.3:1114933-1114952 | MS.gene95855:intron | 30.0% |
| ! | ATAAATGATTTGTCACACTC+TGG | - | chr4.3:1116411-1116430 | None:intergenic | 30.0% |
| ! | ATGGTAGTATTGAAGATCAT+TGG | + | chr4.3:1116097-1116116 | MS.gene95855:intron | 30.0% |
| ! | GAACTTGAATCTTTGTTTGT+AGG | + | chr4.3:1113490-1113509 | MS.gene95855:intron | 30.0% |
| ! | GCCTGTTTTATATGAAAATC+TGG | + | chr4.3:1114818-1114837 | MS.gene95855:intron | 30.0% |
| ! | GTTGCTAATTTTTACTGTAG+AGG | + | chr4.3:1118184-1118203 | MS.gene95855:intron | 30.0% |
| ! | TGTTACAAAAATTTAGGGTG+AGG | - | chr4.3:1115895-1115914 | None:intergenic | 30.0% |
| ! | TTTCTGATTGAAGGTGTATT+TGG | - | chr4.3:1113849-1113868 | None:intergenic | 30.0% |
| ! | TTTTGTCTTTCCAATATTCC+TGG | + | chr4.3:1116714-1116733 | MS.gene95855:intron | 30.0% |
| !! | AGATACATTCCGTTTGTTAT+GGG | + | chr4.3:1116150-1116169 | MS.gene95855:intron | 30.0% |
| !! | CATGGTTTGGTACAATTTAT+GGG | + | chr4.3:1116340-1116359 | MS.gene95855:intron | 30.0% |
| !! | TAGTTTTACTCCAGGAATAT+TGG | - | chr4.3:1116727-1116746 | None:intergenic | 30.0% |
| !! | TATCTATTTCAGGTCTGTTT+TGG | + | chr4.3:1116236-1116255 | MS.gene95855:intron | 30.0% |
| !! | TTGATAGTGTTATGAGACTA+TGG | + | chr4.3:1114256-1114275 | MS.gene95855:intron | 30.0% |
| !!! | GAATTTCTGGTTAAGCATTT+TGG | - | chr4.3:1113415-1113434 | None:intergenic | 30.0% |
| ACAAATCATTTATCGTTGGG+TGG | + | chr4.3:1116418-1116437 | MS.gene95855:CDS | 35.0% | |
| ACAGAACACAGTTTCAAATG+GGG | + | chr4.3:1114710-1114729 | MS.gene95855:CDS | 35.0% | |
| AGACAAAACTTGAAATTGGC+TGG | - | chr4.3:1116702-1116721 | None:intergenic | 35.0% | |
| AGACATAATTGAGCCTTGAA+CGG | + | chr4.3:1117770-1117789 | MS.gene95855:intron | 35.0% | |
| AGCAAAATTTAAATGGCCAC+CGG | - | chr4.3:1118806-1118825 | None:intergenic | 35.0% | |
| AGGTACCTTACTTTCTCTTT+CGG | + | chr4.3:1113447-1113466 | MS.gene95855:intron | 35.0% | |
| AGTAATGCTTTGTCTTTCCT+TGG | + | chr4.3:1118522-1118541 | MS.gene95855:intron | 35.0% | |
| AGTAGTTTGGCCAATATTTG+AGG | + | chr4.3:1115624-1115643 | MS.gene95855:intron | 35.0% | |
| AGTGCACTAAAACTATTCGT+AGG | - | chr4.3:1115384-1115403 | None:intergenic | 35.0% | |
| AGTGGTTAAAAAACAGGTCT+TGG | + | chr4.3:1115757-1115776 | MS.gene95855:intron | 35.0% | |
| ATATCAACGCTTATGGTTGA+AGG | - | chr4.3:1113979-1113998 | None:intergenic | 35.0% | |
| ATATGCCAACTAGAAGATGA+GGG | - | chr4.3:1114581-1114600 | None:intergenic | 35.0% | |
| ATCTATATTCCCACAATTCG+TGG | - | chr4.3:1116897-1116916 | None:intergenic | 35.0% | |
| ATTGACGTGTTCAGGATTAA+GGG | - | chr4.3:1116305-1116324 | None:intergenic | 35.0% | |
| ATTGGAAAAATTAGGTGCTC+TGG | - | chr4.3:1118441-1118460 | None:intergenic | 35.0% | |
| CAGTGCTATGCATATGTATA+TGG | + | chr4.3:1115534-1115553 | MS.gene95855:intron | 35.0% | |
| CCAACTGCTAACTATGAATT+CGG | + | chr4.3:1113618-1113637 | MS.gene95855:CDS | 35.0% | |
| CTAATCAAGGAAGTAGAAAC+AGG | - | chr4.3:1114210-1114229 | None:intergenic | 35.0% | |
| CTCTACAATATCAACGCTTA+TGG | - | chr4.3:1113986-1114005 | None:intergenic | 35.0% | |
| GAAGTTGGACACAAAAACTA+GGG | - | chr4.3:1118121-1118140 | None:intergenic | 35.0% | |
| GAATTTCATTCTTTCTGCAG+AGG | + | chr4.3:1118982-1119001 | MS.gene95855:CDS | 35.0% | |
| GCAGCTTTCAAAAAACACTA+TGG | - | chr4.3:1118341-1118360 | None:intergenic | 35.0% | |
| GGCAAGTTATATTCAGGTAA+TGG | + | chr4.3:1114750-1114769 | MS.gene95855:intron | 35.0% | |
| GTATATATACCCGATACTTG+TGG | - | chr4.3:1115440-1115459 | None:intergenic | 35.0% | |
| GTGCACTAAAACTATTCGTA+GGG | - | chr4.3:1115383-1115402 | None:intergenic | 35.0% | |
| GTGGAGTTTCATACTCAATT+AGG | - | chr4.3:1117872-1117891 | None:intergenic | 35.0% | |
| TAAAAAACAGGTCTTGGATC+CGG | + | chr4.3:1115763-1115782 | MS.gene95855:intron | 35.0% | |
| TAAAGTTGTTGTCACGTGAT+AGG | + | chr4.3:1115269-1115288 | MS.gene95855:intron | 35.0% | |
| TATATGCCAACTAGAAGATG+AGG | - | chr4.3:1114582-1114601 | None:intergenic | 35.0% | |
| TATGAAAATCATGTCAAGGC+AGG | - | chr4.3:1119119-1119138 | None:intergenic | 35.0% | |
| TATGAGAAAGCCACAAGTAT+CGG | + | chr4.3:1115427-1115446 | MS.gene95855:intron | 35.0% | |
| TATTAAATACCATGCGGGTA+TGG | + | chr4.3:1116763-1116782 | MS.gene95855:intron | 35.0% | |
| TCGCTACAACACTGATAAAA+TGG | + | chr4.3:1116492-1116511 | MS.gene95855:CDS | 35.0% | |
| TGGTCTAGTGGTTAAAAAAC+AGG | + | chr4.3:1115751-1115770 | MS.gene95855:intron | 35.0% | |
| TTATGACTACATTCTCAGAC+AGG | + | chr4.3:1117673-1117692 | MS.gene95855:CDS | 35.0% | |
| TTGATACTCAGTGTTTCGAT+GGG | + | chr4.3:1113552-1113571 | MS.gene95855:intron | 35.0% | |
| TTTGATACTCAGTGTTTCGA+TGG | + | chr4.3:1113551-1113570 | MS.gene95855:intron | 35.0% | |
| ! | AAAAATTTAGGGTGAGGAGA+TGG | - | chr4.3:1115889-1115908 | None:intergenic | 35.0% |
| ! | AACCATTGGTTATGCTACAA+AGG | + | chr4.3:1116810-1116829 | MS.gene95855:intron | 35.0% |
| ! | ACCATTGGTTATGCTACAAA+GGG | + | chr4.3:1116811-1116830 | MS.gene95855:intron | 35.0% |
| ! | ATTTTCGGCATCCAAATCAT+TGG | - | chr4.3:1118029-1118048 | None:intergenic | 35.0% |
| ! | CTCACTTGTTAGCTGTAAAA+AGG | - | chr4.3:1114481-1114500 | None:intergenic | 35.0% |
| ! | GAGATACATTCCGTTTGTTA+TGG | + | chr4.3:1116149-1116168 | MS.gene95855:intron | 35.0% |
| ! | GGCAAGAAAGTATGAAGTTA+TGG | - | chr4.3:1114460-1114479 | None:intergenic | 35.0% |
| ! | TAGGTCATGAGTTCAAGTTA+TGG | + | chr4.3:1115288-1115307 | MS.gene95855:intron | 35.0% |
| ! | TATTTTATAGTGCCGCCTTA+GGG | + | chr4.3:1118898-1118917 | MS.gene95855:intron | 35.0% |
| ! | TCTTTTGAGCTATGTTCAGA+AGG | + | chr4.3:1117502-1117521 | MS.gene95855:CDS | 35.0% |
| ! | TGAAAAGGAAGGTATACCTT+AGG | - | chr4.3:1113663-1113682 | None:intergenic | 35.0% |
| ! | TTACTTATTGCTGGCTGAAA+AGG | + | chr4.3:1114316-1114335 | MS.gene95855:intron | 35.0% |
| !! | AAGTATCGGGTATATATACG+TGG | + | chr4.3:1115441-1115460 | MS.gene95855:intron | 35.0% |
| !! | CATAAGCGTTGATATTGTAG+AGG | + | chr4.3:1113984-1114003 | MS.gene95855:intron | 35.0% |
| !! | GCATGGTTTGGTACAATTTA+TGG | + | chr4.3:1116339-1116358 | MS.gene95855:intron | 35.0% |
| !! | TTATTTTATAGTGCCGCCTT+AGG | + | chr4.3:1118897-1118916 | MS.gene95855:intron | 35.0% |
| !! | TTTTGGCTGTCTTCTCTATT+TGG | + | chr4.3:1118268-1118287 | MS.gene95855:intron | 35.0% |
| !!! | ACGAATAGTTTTAGTGCACT+GGG | + | chr4.3:1115384-1115403 | MS.gene95855:intron | 35.0% |
| !!! | CCTTTTTAGCTGTCGTTTTA+GGG | + | chr4.3:1117164-1117183 | MS.gene95855:intron | 35.0% |
| !!! | GCCATCAGCTTAATTTTTTC+AGG | + | chr4.3:1115966-1115985 | MS.gene95855:intron | 35.0% |
| !!! | GTTTTGTAGCTGTTGCTTTT+GGG | + | chr4.3:1114043-1114062 | MS.gene95855:intron | 35.0% |
| !!! | TACGAATAGTTTTAGTGCAC+TGG | + | chr4.3:1115383-1115402 | MS.gene95855:intron | 35.0% |
| !!! | TCCTTTTTAGCTGTCGTTTT+AGG | + | chr4.3:1117163-1117182 | MS.gene95855:intron | 35.0% |
| !!! | TGTTTTGTAGCTGTTGCTTT+TGG | + | chr4.3:1114042-1114061 | MS.gene95855:intron | 35.0% |
| !!! | TTTTGTAGCTGTTGCTTTTG+GGG | + | chr4.3:1114044-1114063 | MS.gene95855:intron | 35.0% |
| AAAAGCAGCACAAACACCAT+TGG | - | chr4.3:1118936-1118955 | None:intergenic | 40.0% | |
| AATCAATCCAATCTGCTGCA+TGG | + | chr4.3:1116322-1116341 | MS.gene95855:intron | 40.0% | |
| AATGCTTTGTCTTTCCTTGG+CGG | + | chr4.3:1118525-1118544 | MS.gene95855:intron | 40.0% | |
| ACACAGTTTCAAATGGGGAA+TGG | + | chr4.3:1114715-1114734 | MS.gene95855:CDS | 40.0% | |
| ACAGCTACAAAACATCACCT+TGG | - | chr4.3:1114036-1114055 | None:intergenic | 40.0% | |
| ACCCTTTGTAGCATAACCAA+TGG | - | chr4.3:1116815-1116834 | None:intergenic | 40.0% | |
| ACGACATGAATGTGAATGTG+TGG | + | chr4.3:1117734-1117753 | MS.gene95855:intron | 40.0% | |
| ACTATTCGTAGGGTCTGATA+AGG | - | chr4.3:1115373-1115392 | None:intergenic | 40.0% | |
| ATATATAAGCAGAGGGAAGC+AGG | - | chr4.3:1116563-1116582 | None:intergenic | 40.0% | |
| ATGAAGTTCTTCGAAGGGAA+TGG | - | chr4.3:1113227-1113246 | None:intergenic | 40.0% | |
| ATGAGAAAGCCACAAGTATC+GGG | + | chr4.3:1115428-1115447 | MS.gene95855:intron | 40.0% | |
| ATTATATCAAGGGGGAACCT+TGG | + | chr4.3:1115238-1115257 | MS.gene95855:intron | 40.0% | |
| ATTTCTACTCAGGGATGGTA+AGG | + | chr4.3:1114942-1114961 | MS.gene95855:intron | 40.0% | |
| CAAATTGATCATCTGCATCC+AGG | + | chr4.3:1117445-1117464 | MS.gene95855:intron | 40.0% | |
| CATCACCTGACCTCAAATAT+TGG | - | chr4.3:1115637-1115656 | None:intergenic | 40.0% | |
| CCCTAAAACGACAGCTAAAA+AGG | - | chr4.3:1117167-1117186 | None:intergenic | 40.0% | |
| CCGAATTCATAGTTAGCAGT+TGG | - | chr4.3:1113621-1113640 | None:intergenic | 40.0% | |
| CGAAGTTGGACACAAAAACT+AGG | - | chr4.3:1118122-1118141 | None:intergenic | 40.0% | |
| CTATTCGTAGGGTCTGATAA+GGG | - | chr4.3:1115372-1115391 | None:intergenic | 40.0% | |
| CTCATCTTATATGGGTGCAT+CGG | + | chr4.3:1117898-1117917 | MS.gene95855:intron | 40.0% | |
| CTGCTGACATTTCTGATTGA+AGG | - | chr4.3:1113858-1113877 | None:intergenic | 40.0% | |
| CTTGTGTAAAAAACAGGGTG+AGG | + | chr4.3:1115317-1115336 | MS.gene95855:intron | 40.0% | |
| GAACTTCATCGATCATCCTA+AGG | + | chr4.3:1113644-1113663 | MS.gene95855:CDS | 40.0% | |
| GACAGCTAAAAAGGAACAGA+GGG | - | chr4.3:1117158-1117177 | None:intergenic | 40.0% | |
| GACATAATTGAGCCTTGAAC+GGG | + | chr4.3:1117771-1117790 | MS.gene95855:intron | 40.0% | |
| GAGGATTCTGACATGTATAC+TGG | + | chr4.3:1113882-1113901 | MS.gene95855:intron | 40.0% | |
| GATTGACGTGTTCAGGATTA+AGG | - | chr4.3:1116306-1116325 | None:intergenic | 40.0% | |
| GTCAATGGAGGAATAGACAA+GGG | - | chr4.3:1116931-1116950 | None:intergenic | 40.0% | |
| TAACCACTAGACCAAACCTT+TGG | - | chr4.3:1115745-1115764 | None:intergenic | 40.0% | |
| TATTCGTAGGGTCTGATAAG+GGG | - | chr4.3:1115371-1115390 | None:intergenic | 40.0% | |
| TGAAGTTCTTCGAAGGGAAT+GGG | - | chr4.3:1113226-1113245 | None:intergenic | 40.0% | |
| TGTTTCCTCTACTAGAACCA+GGG | + | chr4.3:1118499-1118518 | MS.gene95855:intron | 40.0% | |
| TTGGAGGAGAGGTTAAACAT+GGG | + | chr4.3:1118956-1118975 | MS.gene95855:CDS | 40.0% | |
| TTGGATTGATTGACGTGTTC+AGG | - | chr4.3:1116313-1116332 | None:intergenic | 40.0% | |
| TTGTTTCCTCTACTAGAACC+AGG | + | chr4.3:1118498-1118517 | MS.gene95855:intron | 40.0% | |
| TTTGGAGGAGAGGTTAAACA+TGG | + | chr4.3:1118955-1118974 | MS.gene95855:CDS | 40.0% | |
| ! | AAAGACAAAGCATTACTCCC+TGG | - | chr4.3:1118519-1118538 | None:intergenic | 40.0% |
| ! | AATATAACTTGCCCCTAGCA+AGG | - | chr4.3:1114743-1114762 | None:intergenic | 40.0% |
| ! | ACTTGCTGCAATTGAAAGTG+TGG | + | chr4.3:1117927-1117946 | MS.gene95855:intron | 40.0% |
| ! | AGGACTTAGAGCACTTACAA+AGG | - | chr4.3:1115838-1115857 | None:intergenic | 40.0% |
| ! | ATGCTAAAAAGGTGCGAAGT+TGG | - | chr4.3:1118136-1118155 | None:intergenic | 40.0% |
| ! | ATTTTATAGTGCCGCCTTAG+GGG | + | chr4.3:1118899-1118918 | MS.gene95855:intron | 40.0% |
| ! | CAATATTTGAGGTCAGGTGA+TGG | + | chr4.3:1115635-1115654 | MS.gene95855:intron | 40.0% |
| ! | CACTTTGAAAGCAAATGCTC+AGG | + | chr4.3:1114126-1114145 | MS.gene95855:CDS | 40.0% |
| ! | CAGTTAGAGTTGCTTTCATG+TGG | + | chr4.3:1117807-1117826 | MS.gene95855:intron | 40.0% |
| ! | GGACTTAGAGCACTTACAAA+GGG | - | chr4.3:1115837-1115856 | None:intergenic | 40.0% |
| ! | TAACTTCTCTCTAAAGGCAC+TGG | - | chr4.3:1115806-1115825 | None:intergenic | 40.0% |
| ! | TCATGTCGTACTATTTTCCG+TGG | - | chr4.3:1117723-1117742 | None:intergenic | 40.0% |
| ! | TGGATATTTCTACTCAGGGA+TGG | + | chr4.3:1114937-1114956 | MS.gene95855:intron | 40.0% |
| ! | TGTAAGTGCTCTAAGTCCTA+AGG | + | chr4.3:1115839-1115858 | MS.gene95855:intron | 40.0% |
| ! | TGTTCAGAAGGTTTCTGAGA+AGG | + | chr4.3:1117514-1117533 | MS.gene95855:CDS | 40.0% |
| ! | TTGAAGCCGGAACTTTTTGA+AGG | + | chr4.3:1113372-1113391 | MS.gene95855:CDS | 40.0% |
| ! | TTGTCGAATTTGGATTAGGG+AGG | + | chr4.3:1118776-1118795 | MS.gene95855:intron | 40.0% |
| ! | TTTGGCCAATATTTGAGGTC+AGG | + | chr4.3:1115629-1115648 | MS.gene95855:intron | 40.0% |
| !! | GTACATCGTAGTTTTACTCC+AGG | - | chr4.3:1116735-1116754 | None:intergenic | 40.0% |
| !! | TTTGGATTTGGTTTGACCGT+TGG | + | chr4.3:1119180-1119199 | MS.gene95855:CDS | 40.0% |
| !!! | GTTTTCAGTGTCTTTGAAGC+CGG | + | chr4.3:1113359-1113378 | MS.gene95855:intron | 40.0% |
| !!! | TGGTGTTTGTGCTGCTTTTT+TGG | + | chr4.3:1118937-1118956 | MS.gene95855:CDS | 40.0% |
| !!! | TGTACGTGTGCTGTTTGTTT+TGG | + | chr4.3:1117992-1118011 | MS.gene95855:intron | 40.0% |
| !!! | TGTTTGTGCTGCTTTTTTGG+AGG | + | chr4.3:1118940-1118959 | MS.gene95855:CDS | 40.0% |
| AATCAACCTTTCCCCTAAGG+CGG | - | chr4.3:1118913-1118932 | None:intergenic | 45.0% | |
| ACCTCTCATGTCAGTAACAC+AGG | - | chr4.3:1118740-1118759 | None:intergenic | 45.0% | |
| AGTGACTGACGTCAATGTCA+AGG | - | chr4.3:1113801-1113820 | None:intergenic | 45.0% | |
| ATAACCTCAGCAGACTGAGA+AGG | - | chr4.3:1113591-1113610 | None:intergenic | 45.0% | |
| ATCATCCCTTGCGACATATG+TGG | - | chr4.3:1114504-1114523 | None:intergenic | 45.0% | |
| ATCCAATCTGCTGCATGGTT+TGG | + | chr4.3:1116327-1116346 | MS.gene95855:intron | 45.0% | |
| ATCTTATATGGGTGCATCGG+AGG | + | chr4.3:1117901-1117920 | MS.gene95855:intron | 45.0% | |
| CAAAAGAACCATTCCAGTGC+TGG | - | chr4.3:1117489-1117508 | None:intergenic | 45.0% | |
| CACTGCATCCTCCAATGATT+TGG | + | chr4.3:1118015-1118034 | MS.gene95855:intron | 45.0% | |
| CAGAAATGTCAGCAGTACAG+AGG | + | chr4.3:1113863-1113882 | MS.gene95855:intron | 45.0% | |
| CGACAGCTAAAAAGGAACAG+AGG | - | chr4.3:1117159-1117178 | None:intergenic | 45.0% | |
| CGCATGCCTTCAAAAAGTTC+CGG | - | chr4.3:1113381-1113400 | None:intergenic | 45.0% | |
| CTTATGGTTGAAGGCTTGTG+TGG | - | chr4.3:1113970-1113989 | None:intergenic | 45.0% | |
| GACTGAGAAGGAATCTCAGT+AGG | - | chr4.3:1113579-1113598 | None:intergenic | 45.0% | |
| GAGAGCTATGACTGATGGAA+GGG | + | chr4.3:1114066-1114085 | MS.gene95855:CDS | 45.0% | |
| GATCCTAGTCAGCTTTCGAA+GGG | - | chr4.3:1118697-1118716 | None:intergenic | 45.0% | |
| GCTAGGGGCAAGTTATATTC+AGG | + | chr4.3:1114744-1114763 | MS.gene95855:CDS | 45.0% | |
| GGTCAATGGAGGAATAGACA+AGG | - | chr4.3:1116932-1116951 | None:intergenic | 45.0% | |
| GTACAACACACCGAAATGGT+GGG | + | chr4.3:1115344-1115363 | MS.gene95855:intron | 45.0% | |
| TACCAAACCATGCAGCAGAT+TGG | - | chr4.3:1116332-1116351 | None:intergenic | 45.0% | |
| TCACATGAAATGTTCCTCGC+AGG | + | chr4.3:1117589-1117608 | MS.gene95855:intron | 45.0% | |
| TCATTTATCGTTGGGTGGAG+AGG | + | chr4.3:1116423-1116442 | MS.gene95855:CDS | 45.0% | |
| TCGCGATGAAGTTCTTCGAA+GGG | - | chr4.3:1113232-1113251 | None:intergenic | 45.0% | |
| TCTTATATGGGTGCATCGGA+GGG | + | chr4.3:1117902-1117921 | MS.gene95855:intron | 45.0% | |
| TGAGCCTTGAACGGGATTAT+GGG | + | chr4.3:1117779-1117798 | MS.gene95855:intron | 45.0% | |
| TGATCCTAGTCAGCTTTCGA+AGG | - | chr4.3:1118698-1118717 | None:intergenic | 45.0% | |
| TGGAATCAACCTTTCCCCTA+AGG | - | chr4.3:1118916-1118935 | None:intergenic | 45.0% | |
| TGTTGCCCTCATCTTCTAGT+TGG | + | chr4.3:1114573-1114592 | MS.gene95855:intron | 45.0% | |
| TTCGCGATGAAGTTCTTCGA+AGG | - | chr4.3:1113233-1113252 | None:intergenic | 45.0% | |
| TTCGGCATCCAAATCATTGG+AGG | - | chr4.3:1118026-1118045 | None:intergenic | 45.0% | |
| TTGAGCCTTGAACGGGATTA+TGG | + | chr4.3:1117778-1117797 | MS.gene95855:intron | 45.0% | |
| ! | AAAAGCATACCATACCCGCA+TGG | - | chr4.3:1116775-1116794 | None:intergenic | 45.0% |
| ! | AAGCTGCTGATTGTGCATGT+AGG | - | chr4.3:1116539-1116558 | None:intergenic | 45.0% |
| ! | ACTCCAAAGGTTTGGTCTAG+TGG | + | chr4.3:1115739-1115758 | MS.gene95855:intron | 45.0% |
| ! | AGGGGAAAGGTTGATTCCAA+TGG | + | chr4.3:1118917-1118936 | MS.gene95855:CDS | 45.0% |
| ! | TCCTGTGTTACTGACATGAG+AGG | + | chr4.3:1118736-1118755 | MS.gene95855:intron | 45.0% |
| ! | TTTGGATTAGGGAGGTCATC+CGG | + | chr4.3:1118784-1118803 | MS.gene95855:intron | 45.0% |
| !! | TTACTCCCTGGTTCTAGTAG+AGG | - | chr4.3:1118507-1118526 | None:intergenic | 45.0% |
| !! | TTCTCTCTAAAGGCACTGGT+GGG | - | chr4.3:1115802-1115821 | None:intergenic | 45.0% |
| !!! | GTTGGGTGGAGAGGTATTTT+GGG | + | chr4.3:1116432-1116451 | MS.gene95855:CDS | 45.0% |
| !! | TATATGTAAATATAAATTTA+TGG | + | chr4.3:1115930-1115949 | MS.gene95855:intron | 5.0% |
| !!! | ATTTTTTTTTTATTTAAAGA+TGG | + | chr4.3:1114917-1114936 | MS.gene95855:intron | 5.0% |
| !!! | CAATTAAAAAATTTTAAAAT+AGG | - | chr4.3:1118578-1118597 | None:intergenic | 5.0% |
| !!! | CTATTTTAAAATTTTTTAAT+TGG | + | chr4.3:1118576-1118595 | MS.gene95855:intron | 5.0% |
| ACAACTTTACCGTTGCGCCA+AGG | - | chr4.3:1115258-1115277 | None:intergenic | 50.0% | |
| ACTCAGGGATGGTAAGGTAC+AGG | + | chr4.3:1114948-1114967 | MS.gene95855:intron | 50.0% | |
| AGTGAGCCACATATGTCGCA+AGG | + | chr4.3:1114495-1114514 | MS.gene95855:CDS | 50.0% | |
| ATCAGTGTCAGTGCTGTGCT+TGG | - | chr4.3:1113728-1113747 | None:intergenic | 50.0% | |
| CAGGGTAGAACATGGAGGTT+GGG | - | chr4.3:1116953-1116972 | None:intergenic | 50.0% | |
| CCTATAGCACTGTCACGTTG+CGG | + | chr4.3:1116837-1116856 | MS.gene95855:intron | 50.0% | |
| CGTACAACACACCGAAATGG+TGG | + | chr4.3:1115343-1115362 | MS.gene95855:intron | 50.0% | |
| CTCCATGTTCTACCCTGCAA+GGG | + | chr4.3:1116956-1116975 | MS.gene95855:intron | 50.0% | |
| CTGATCGACCTTCTTGTCGT+CGG | - | chr4.3:1113176-1113195 | None:intergenic | 50.0% | |
| CTGCGTACAACACACCGAAA+TGG | + | chr4.3:1115340-1115359 | MS.gene95855:intron | 50.0% | |
| GAACATGGAGGTTGGGTCAA+TGG | - | chr4.3:1116946-1116965 | None:intergenic | 50.0% | |
| GAACCCTTCGAAAGCTGACT+AGG | + | chr4.3:1118691-1118710 | MS.gene95855:intron | 50.0% | |
| GATAAGGGGTCCCACCATTT+CGG | - | chr4.3:1115357-1115376 | None:intergenic | 50.0% | |
| GATTCCTTCTCAGTCTGCTG+AGG | + | chr4.3:1113584-1113603 | MS.gene95855:CDS | 50.0% | |
| GGAGAGCTATGACTGATGGA+AGG | + | chr4.3:1114065-1114084 | MS.gene95855:CDS | 50.0% | |
| GGATGGTAAGGTACAGGTAC+GGG | + | chr4.3:1114954-1114973 | MS.gene95855:intron | 50.0% | |
| GGGATGGTAAGGTACAGGTA+CGG | + | chr4.3:1114953-1114972 | MS.gene95855:intron | 50.0% | |
| GTCTTGGATCCGGAAGTTCT+GGG | + | chr4.3:1115773-1115792 | MS.gene95855:intron | 50.0% | |
| GTGAGCCACATATGTCGCAA+GGG | + | chr4.3:1114496-1114515 | MS.gene95855:CDS | 50.0% | |
| GTTGTTAGGGTGTGTGTGTC+TGG | + | chr4.3:1119034-1119053 | MS.gene95855:intron | 50.0% | |
| TCCAAGGCAGGTAAGACCTT+AGG | - | chr4.3:1115858-1115877 | None:intergenic | 50.0% | |
| TCCATGTTCTACCCTGCAAG+GGG | + | chr4.3:1116957-1116976 | MS.gene95855:intron | 50.0% | |
| TCCTAAGGTCTTACCTGCCT+TGG | + | chr4.3:1115854-1115873 | MS.gene95855:intron | 50.0% | |
| TCTTCGAAGGGAATGGGACA+AGG | - | chr4.3:1113220-1113239 | None:intergenic | 50.0% | |
| TGAGCCCATAATCCCGTTCA+AGG | - | chr4.3:1117786-1117805 | None:intergenic | 50.0% | |
| TTGGGGAGAGCTATGACTGA+TGG | + | chr4.3:1114061-1114080 | MS.gene95855:CDS | 50.0% | |
| ! | ACAAGTTGCCAGCACTGGAA+TGG | + | chr4.3:1117478-1117497 | MS.gene95855:CDS | 50.0% |
| ! | AGAGACGTCACTGCTAGCTT+TGG | + | chr4.3:1117650-1117669 | MS.gene95855:CDS | 50.0% |
| !! | CTTCTCTCTAAAGGCACTGG+TGG | - | chr4.3:1115803-1115822 | None:intergenic | 50.0% |
| !! | TCTCTCTAAAGGCACTGGTG+GGG | - | chr4.3:1115801-1115820 | None:intergenic | 50.0% |
| !!! | CGTTGGGTGGAGAGGTATTT+TGG | + | chr4.3:1116431-1116450 | MS.gene95855:CDS | 50.0% |
| !!! | GTGCTGCTTTTTTGGAGGAG+AGG | + | chr4.3:1118945-1118964 | MS.gene95855:CDS | 50.0% |
| ACAGGACAAGTTGCCAGCAC+TGG | + | chr4.3:1117473-1117492 | MS.gene95855:CDS | 55.0% | |
| AGCAGCTAGAGAAACCTGCG+AGG | - | chr4.3:1117606-1117625 | None:intergenic | 55.0% | |
| AGGTCTTACCTGCCTTGGAC+TGG | + | chr4.3:1115859-1115878 | MS.gene95855:intron | 55.0% | |
| ATAGTGCCGCCTTAGGGGAA+AGG | + | chr4.3:1118904-1118923 | MS.gene95855:intron | 55.0% | |
| ATCGACCTTCTTGTCGTCGG+CGG | - | chr4.3:1113173-1113192 | None:intergenic | 55.0% | |
| ATCTGCATCCAGGTTGCCAC+AGG | + | chr4.3:1117455-1117474 | MS.gene95855:intron | 55.0% | |
| ATGGGGAATGGAGCCTTGCT+AGG | + | chr4.3:1114727-1114746 | MS.gene95855:CDS | 55.0% | |
| CAACTTGTCCTGTGGCAACC+TGG | - | chr4.3:1117466-1117485 | None:intergenic | 55.0% | |
| CATGGAGGTTGGGTCAATGG+AGG | - | chr4.3:1116943-1116962 | None:intergenic | 55.0% | |
| CCATGTTCTACCCTGCAAGG+GGG | + | chr4.3:1116958-1116977 | MS.gene95855:intron | 55.0% | |
| CCGCAACGTGACAGTGCTAT+AGG | - | chr4.3:1116840-1116859 | None:intergenic | 55.0% | |
| CCTCCATGTTCTACCCTGCA+AGG | + | chr4.3:1116955-1116974 | MS.gene95855:intron | 55.0% | |
| CCTTGCAGGGTAGAACATGG+AGG | - | chr4.3:1116958-1116977 | None:intergenic | 55.0% | |
| CGAAGGGAATGGGACAAGGA+AGG | - | chr4.3:1113216-1113235 | None:intergenic | 55.0% | |
| GCAGGGTAGAACATGGAGGT+TGG | - | chr4.3:1116954-1116973 | None:intergenic | 55.0% | |
| GCGAGCAGCATAACCTACAC+CGG | - | chr4.3:1116476-1116495 | None:intergenic | 55.0% | |
| GGGAATGGGACAAGGAAGGT+TGG | - | chr4.3:1113212-1113231 | None:intergenic | 55.0% | |
| GGTCTTACCTGCCTTGGACT+GGG | + | chr4.3:1115860-1115879 | MS.gene95855:intron | 55.0% | |
| GGTCTTGGATCCGGAAGTTC+TGG | + | chr4.3:1115772-1115791 | MS.gene95855:intron | 55.0% | |
| GTCTTACCTGCCTTGGACTG+GGG | + | chr4.3:1115861-1115880 | MS.gene95855:intron | 55.0% | |
| TAGCACTGTCACGTTGCGGA+AGG | + | chr4.3:1116841-1116860 | MS.gene95855:intron | 55.0% | |
| TGGGGAATGGAGCCTTGCTA+GGG | + | chr4.3:1114728-1114747 | MS.gene95855:CDS | 55.0% | |
| TTCACCATCTCCCCCTTGCA+GGG | - | chr4.3:1116971-1116990 | None:intergenic | 55.0% | |
| ! | CAGCATCGAAAGTCCGGTGT+AGG | + | chr4.3:1116460-1116479 | MS.gene95855:CDS | 55.0% |
| ! | GCTGGTCAGCATCGAAAGTC+CGG | + | chr4.3:1116454-1116473 | MS.gene95855:CDS | 55.0% |
| !! | AGTGCTGGCAACTTGTCCTG+TGG | - | chr4.3:1117474-1117493 | None:intergenic | 55.0% |
| !!! | GGTGGAGAGGTATTTTGGGC+TGG | + | chr4.3:1116436-1116455 | MS.gene95855:CDS | 55.0% |
| AAGGGGGAACCTTGGCGCAA+CGG | + | chr4.3:1115246-1115265 | MS.gene95855:intron | 60.0% | |
| ACCTTCTTGTCGTCGGCGGT+GGG | - | chr4.3:1113169-1113188 | None:intergenic | 60.0% | |
| ACTGCTGCCGTACTTGCCTG+GGG | + | chr4.3:1116871-1116890 | MS.gene95855:intron | 60.0% | |
| CCCCCTTGCAGGGTAGAACA+TGG | - | chr4.3:1116961-1116980 | None:intergenic | 60.0% | |
| CTTCACCATCTCCCCCTTGC+AGG | - | chr4.3:1116972-1116991 | None:intergenic | 60.0% | |
| GACTGCTGCCGTACTTGCCT+GGG | + | chr4.3:1116870-1116889 | MS.gene95855:intron | 60.0% | |
| GGATTAGGGAGGTCATCCGG+TGG | + | chr4.3:1118787-1118806 | MS.gene95855:intron | 60.0% | |
| GGCGTCACTGAAATCCGCCA+AGG | - | chr4.3:1118542-1118561 | None:intergenic | 60.0% | |
| GGGGAATGGAGCCTTGCTAG+GGG | + | chr4.3:1114729-1114748 | MS.gene95855:CDS | 60.0% | |
| GGTGGGGAACCCAGAACTTC+CGG | - | chr4.3:1115785-1115804 | None:intergenic | 60.0% | |
| TCTACCCTGCAAGGGGGAGA+TGG | + | chr4.3:1116964-1116983 | MS.gene95855:intron | 60.0% | |
| TGCCTGGGGCCACGAATTGT+GGG | + | chr4.3:1116885-1116904 | MS.gene95855:intron | 60.0% | |
| TTCCCACAATTCGTGGCCCC+AGG | - | chr4.3:1116890-1116909 | None:intergenic | 60.0% | |
| TTCGTGGCCCCAGGCAAGTA+CGG | - | chr4.3:1116881-1116900 | None:intergenic | 60.0% | |
| TTGCCTGGGGCCACGAATTG+TGG | + | chr4.3:1116884-1116903 | MS.gene95855:intron | 60.0% | |
| TTGTCGTCGGCGGTGGGAAT+CGG | - | chr4.3:1113163-1113182 | None:intergenic | 60.0% | |
| ! | CTTCGGCGTCGAAGACGTGT+CGG | + | chr4.3:1113941-1113960 | MS.gene95855:intron | 60.0% |
| ATGGCACCCCAGTCCAAGGC+AGG | - | chr4.3:1115870-1115889 | None:intergenic | 65.0% | |
| CGACTGCTGCCGTACTTGCC+TGG | + | chr4.3:1116869-1116888 | MS.gene95855:intron | 65.0% | |
| GACCTTCTTGTCGTCGGCGG+TGG | - | chr4.3:1113170-1113189 | None:intergenic | 65.0% | |
| GGAGATGGCACCCCAGTCCA+AGG | - | chr4.3:1115874-1115893 | None:intergenic | 65.0% | |
| TCCCACCGCCGACGACAAGA+AGG | + | chr4.3:1113165-1113184 | MS.gene95855:CDS | 65.0% | |
| TCGTCGGCGGTGGGAATCGG+TGG | - | chr4.3:1113160-1113179 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 1113142 | 1119209 | 1113142 | ID=MS.gene95855 |
| chr4.3 | mRNA | 1113142 | 1119209 | 1113142 | ID=MS.gene95855.t1;Parent=MS.gene95855 |
| chr4.3 | exon | 1113142 | 1113259 | 1113142 | ID=MS.gene95855.t1.exon1;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1113142 | 1113259 | 1113142 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1113367 | 1113448 | 1113367 | ID=MS.gene95855.t1.exon2;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1113367 | 1113448 | 1113367 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1113563 | 1113665 | 1113563 | ID=MS.gene95855.t1.exon3;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1113563 | 1113665 | 1113563 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1114052 | 1114147 | 1114052 | ID=MS.gene95855.t1.exon4;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1114052 | 1114147 | 1114052 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1114489 | 1114539 | 1114489 | ID=MS.gene95855.t1.exon5;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1114489 | 1114539 | 1114489 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1114700 | 1114765 | 1114700 | ID=MS.gene95855.t1.exon6;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1114700 | 1114765 | 1114700 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1116412 | 1116513 | 1116412 | ID=MS.gene95855.t1.exon7;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1116412 | 1116513 | 1116412 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1117467 | 1117535 | 1117467 | ID=MS.gene95855.t1.exon8;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1117467 | 1117535 | 1117467 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1117611 | 1117694 | 1117611 | ID=MS.gene95855.t1.exon9;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1117611 | 1117694 | 1117611 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1118908 | 1119003 | 1118908 | ID=MS.gene95855.t1.exon10;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1118908 | 1119003 | 1118908 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| chr4.3 | exon | 1119153 | 1119209 | 1119153 | ID=MS.gene95855.t1.exon11;Parent=MS.gene95855.t1 |
| chr4.3 | CDS | 1119153 | 1119209 | 1119153 | ID=cds.MS.gene95855.t1;Parent=MS.gene95855.t1 |
| Gene Sequence |
| Protein sequence |
