Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95991.t1 | XP_013464449.1 | 95.6 | 206 | 9 | 0 | 20 | 225 | 71 | 276 | 9.50E-104 | 386.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95991.t1 | Q9C8L2 | 63.0 | 219 | 76 | 1 | 12 | 225 | 68 | 286 | 6.9e-71 | 268.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95991.t1 | A0A072V8X6 | 95.6 | 206 | 9 | 0 | 20 | 225 | 71 | 276 | 6.8e-104 | 386.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene95991 | 0.808278 | 3.35E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene95991 | 0.800782 | 1.23E-48 | -1.69E-46 |
| MS.gene049627 | MS.gene95991 | 0.84488 | 5.75E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene95991 | 0.814733 | 1.33E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene95991 | 0.819902 | 9.10E-53 | -1.69E-46 |
| MS.gene05087 | MS.gene95991 | 0.823527 | 1.32E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene95991 | 0.805116 | 1.56E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene95991 | 0.817232 | 3.67E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene95991 | 0.814002 | 1.92E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene95991 | 0.800133 | 1.66E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene95991 | 0.808837 | 2.54E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene95991 | 0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene95991 | 0.816938 | 4.27E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene95991 | 0.80626 | 8.97E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene95991 | 0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene95991 | 0.811109 | 8.25E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene95991 | 0.815218 | 1.03E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene95991 | 0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene061171 | MS.gene95991 | 0.806401 | 8.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95991.t1 | MTR_2g072510 | 95.652 | 207 | 9 | 0 | 19 | 225 | 70 | 276 | 4.10e-143 | 401 |
| MS.gene95991.t1 | MTR_1g115890 | 28.641 | 206 | 138 | 5 | 29 | 226 | 13 | 217 | 2.81e-16 | 75.1 |
| MS.gene95991.t1 | MTR_1g115840 | 27.094 | 203 | 143 | 3 | 29 | 226 | 15 | 217 | 6.14e-15 | 71.6 |
| MS.gene95991.t1 | MTR_3g093980 | 26.131 | 199 | 138 | 5 | 36 | 226 | 31 | 228 | 8.75e-14 | 68.6 |
| MS.gene95991.t1 | MTR_3g093980 | 26.744 | 172 | 120 | 4 | 60 | 226 | 6 | 176 | 4.55e-12 | 62.8 |
| MS.gene95991.t1 | MTR_3g093980 | 24.444 | 135 | 96 | 2 | 35 | 163 | 10 | 144 | 3.20e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95991.t1 | AT1G53520 | 64.384 | 219 | 73 | 2 | 12 | 225 | 68 | 286 | 2.05e-94 | 278 |
Find 46 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTGACGGTAAAACTTTC+TGG | 0.187258 | 2.4:-23694086 | MS.gene95991:CDS |
| TTTGAAAGTGAACCTAATTT+AGG | 0.192670 | 2.4:+23695661 | None:intergenic |
| AGAAAAGCTTACAAGCAATT+TGG | 0.250679 | 2.4:+23693921 | None:intergenic |
| GAGGGCGTAATTCCTAAATT+AGG | 0.272798 | 2.4:-23695673 | MS.gene95991:intron |
| AAATGAAAGTTCCTTTCTTA+AGG | 0.288163 | 2.4:+23693965 | None:intergenic |
| GAAATTGTTACATTGGAAAA+TGG | 0.309864 | 2.4:+23694394 | None:intergenic |
| GCCCTCTTCGTCTGTCAAAA+AGG | 0.312942 | 2.4:+23695690 | None:intergenic |
| GGCGTCAAGGTCTATGCTTC+TGG | 0.323231 | 2.4:-23694509 | MS.gene95991:CDS |
| TCAGACTCATTAACATTGTT+TGG | 0.328011 | 2.4:-23695137 | MS.gene95991:CDS |
| TCAGACATCTTTGAGTTTCC+CGG | 0.335505 | 2.4:-23695165 | MS.gene95991:CDS |
| AATGAAAGTTCCTTTCTTAA+GGG | 0.338163 | 2.4:+23693966 | None:intergenic |
| TGAAATTTCACATTTGTTGC+TGG | 0.346422 | 2.4:+23695185 | None:intergenic |
| TTGAGCAACTGAAGCTTTCA+AGG | 0.381196 | 2.4:+23693718 | None:intergenic |
| TCATTAACATTGTTTGGAAC+TGG | 0.398099 | 2.4:-23695131 | MS.gene95991:intron |
| GCTTTCAAGGAGGGAGATAC+AGG | 0.424288 | 2.4:+23693731 | None:intergenic |
| CAGGTTTCTGTCTCGTCAGA+GGG | 0.437885 | 2.4:-23693833 | MS.gene95991:CDS |
| TGTTGACGGTAAAACTTTCT+GGG | 0.445487 | 2.4:-23694085 | MS.gene95991:CDS |
| ATGAAAGTTCCTTTCTTAAG+GGG | 0.452657 | 2.4:+23693967 | None:intergenic |
| ATTGTAGCATCCACAGTAGA+TGG | 0.452706 | 2.4:+23693806 | None:intergenic |
| GCAGTTTCATCTGCAGTTGT+TGG | 0.453526 | 2.4:+23694024 | None:intergenic |
| TGTGGATGCTACAATTGAAT+CGG | 0.493591 | 2.4:-23693798 | MS.gene95991:CDS |
| TCAACTCATTTACGATAGAC+TGG | 0.499366 | 2.4:+23694474 | None:intergenic |
| CAGTCGAAAGATGTTATTCA+AGG | 0.515053 | 2.4:-23694437 | MS.gene95991:CDS |
| CAGACATCTTTGAGTTTCCC+GGG | 0.519909 | 2.4:-23695164 | MS.gene95991:CDS |
| TCAGGTTTCTGTCTCGTCAG+AGG | 0.541897 | 2.4:-23693834 | MS.gene95991:intron |
| AAAGCTTACAAGCAATTTGG+AGG | 0.544044 | 2.4:+23693924 | None:intergenic |
| GCAACTGAAGCTTTCAAGGA+GGG | 0.547069 | 2.4:+23693722 | None:intergenic |
| TCGTAAATGAGTTGAATGCT+TGG | 0.553867 | 2.4:-23694466 | MS.gene95991:CDS |
| AGCTTACAAGCAATTTGGAG+GGG | 0.555652 | 2.4:+23693926 | None:intergenic |
| GTTAATGAGTCTGAGCAACC+CGG | 0.566583 | 2.4:+23695146 | None:intergenic |
| ACTCTTGTAAGAGATGTTGA+CGG | 0.568321 | 2.4:-23694099 | MS.gene95991:CDS |
| ATGAGTTGAATGCTTGGAAA+GGG | 0.574681 | 2.4:-23694460 | MS.gene95991:CDS |
| AAGCTTACAAGCAATTTGGA+GGG | 0.578278 | 2.4:+23693925 | None:intergenic |
| ATTTGCAATAATTTCACAAG+GGG | 0.578676 | 2.4:+23694123 | None:intergenic |
| TTGGAAAATGGTCTTGAACA+AGG | 0.586433 | 2.4:+23694406 | None:intergenic |
| TGAAAGTTCCTTTCTTAAGG+GGG | 0.594314 | 2.4:+23693968 | None:intergenic |
| AATGAGTTGAATGCTTGGAA+AGG | 0.600633 | 2.4:-23694461 | MS.gene95991:CDS |
| GGCGATCTTGAAAGACACTA+CGG | 0.617604 | 2.4:+23693989 | None:intergenic |
| TAATTTGCAATAATTTCACA+AGG | 0.634069 | 2.4:+23694121 | None:intergenic |
| GGCAAATGCTGAATACATTG+AGG | 0.643782 | 2.4:-23695210 | MS.gene95991:CDS |
| AGTCGAAAGATGTTATTCAA+GGG | 0.643960 | 2.4:-23694436 | MS.gene95991:CDS |
| AGCAACTGAAGCTTTCAAGG+AGG | 0.661635 | 2.4:+23693721 | None:intergenic |
| TTAATGAGTCTGAGCAACCC+GGG | 0.664480 | 2.4:+23695147 | None:intergenic |
| AGAGGGGATTCCATCTACTG+TGG | 0.671024 | 2.4:-23693816 | MS.gene95991:CDS |
| AGGTTTCTGTCTCGTCAGAG+GGG | 0.676486 | 2.4:-23693832 | MS.gene95991:CDS |
| AATTTGCAATAATTTCACAA+GGG | 0.705756 | 2.4:+23694122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGAGAATAATTTGATA+AGG | - | chr2.4:23695224-23695243 | MS.gene95991:intron | 15.0% |
| !! | TGAAAACATTATGTTTATAA+TGG | - | chr2.4:23694699-23694718 | MS.gene95991:intron | 15.0% |
| !!! | AATTTTCATGTCAATTAATA+CGG | - | chr2.4:23694502-23694521 | MS.gene95991:CDS | 15.0% |
| !!! | ATGTTTATAATGGTATTTTA+TGG | - | chr2.4:23694709-23694728 | MS.gene95991:intron | 15.0% |
| !!! | TGTTTTTCAAAAGAAATAAA+TGG | + | chr2.4:23695030-23695049 | None:intergenic | 15.0% |
| !! | AAACAAAAAATTGTTGAAAC+CGG | + | chr2.4:23695534-23695553 | None:intergenic | 20.0% |
| !! | AAATATTTAATTCTGCAAGA+TGG | + | chr2.4:23694623-23694642 | None:intergenic | 20.0% |
| !! | AATTTGCAATAATTTCACAA+GGG | + | chr2.4:23695275-23695294 | None:intergenic | 20.0% |
| !! | TTGTACTAAATTAGATATCA+TGG | - | chr2.4:23695133-23695152 | MS.gene95991:CDS | 20.0% |
| !!! | AATTTTTTGTTTGTGATTTC+AGG | - | chr2.4:23695542-23695561 | MS.gene95991:intron | 20.0% |
| !!! | GAAAAAGTTTTTGCTATTAT+TGG | - | chr2.4:23694864-23694883 | MS.gene95991:intron | 20.0% |
| !!! | TAATTTGCAATAATTTCACA+AGG | + | chr2.4:23695276-23695295 | None:intergenic | 20.0% |
| ! | AAATGAAAGTTCCTTTCTTA+AGG | + | chr2.4:23695432-23695451 | None:intergenic | 25.0% |
| ! | AATGAAAGTTCCTTTCTTAA+GGG | + | chr2.4:23695431-23695450 | None:intergenic | 25.0% |
| ! | ATTTGCAATAATTTCACAAG+GGG | + | chr2.4:23695274-23695293 | None:intergenic | 25.0% |
| ! | CATCATATCAACCAATTTAA+AGG | + | chr2.4:23694415-23694434 | None:intergenic | 25.0% |
| ! | GAAATTGTTACATTGGAAAA+TGG | + | chr2.4:23695003-23695022 | None:intergenic | 25.0% |
| ! | TATAAATGATCAGTCTACTT+TGG | + | chr2.4:23694081-23694100 | None:intergenic | 25.0% |
| ! | TATAATGTAGCAATTTCATG+TGG | - | chr2.4:23694341-23694360 | MS.gene95991:intron | 25.0% |
| ! | TATATGATTGAATAATGCAG+CGG | - | chr2.4:23694163-23694182 | MS.gene95991:intron | 25.0% |
| ! | TGGATAAGAAATTGTTACAT+TGG | + | chr2.4:23695010-23695029 | None:intergenic | 25.0% |
| ! | TTAGTTGACATAGTATTACA+TGG | - | chr2.4:23694286-23694305 | MS.gene95991:intron | 25.0% |
| ! | TTTGAAAGTGAACCTAATTT+AGG | + | chr2.4:23693736-23693755 | None:intergenic | 25.0% |
| !! | ATTCACAACATGATTTTGAA+AGG | + | chr2.4:23694485-23694504 | None:intergenic | 25.0% |
| !! | TTGATAATAACACCTATTTC+AGG | - | chr2.4:23694834-23694853 | MS.gene95991:intron | 25.0% |
| !!! | GAACTTTCATTTTTTTGACT+TGG | - | chr2.4:23695440-23695459 | MS.gene95991:intron | 25.0% |
| AATCAGTGTTGTGAAATAAC+CGG | + | chr2.4:23695207-23695226 | None:intergenic | 30.0% | |
| AGAAAAGCTTACAAGCAATT+TGG | + | chr2.4:23695476-23695495 | None:intergenic | 30.0% | |
| AGTCGAAAGATGTTATTCAA+GGG | - | chr2.4:23694958-23694977 | MS.gene95991:intron | 30.0% | |
| ATGAAAGTTCCTTTCTTAAG+GGG | + | chr2.4:23695430-23695449 | None:intergenic | 30.0% | |
| CTACTAGACGGAAATAATTA+CGG | + | chr2.4:23694756-23694775 | None:intergenic | 30.0% | |
| TACTAGACGGAAATAATTAC+GGG | + | chr2.4:23694755-23694774 | None:intergenic | 30.0% | |
| TATCAACCAATTTAAAGGCA+AGG | + | chr2.4:23694410-23694429 | None:intergenic | 30.0% | |
| TCAGACTCATTAACATTGTT+TGG | - | chr2.4:23694257-23694276 | MS.gene95991:intron | 30.0% | |
| ! | GCTCTTTTTGATGTATTTCT+CGG | - | chr2.4:23695633-23695652 | MS.gene95991:intron | 30.0% |
| ! | TCATTAACATTGTTTGGAAC+TGG | - | chr2.4:23694263-23694282 | MS.gene95991:intron | 30.0% |
| ! | TGAAATTTCACATTTGTTGC+TGG | + | chr2.4:23694212-23694231 | None:intergenic | 30.0% |
| ! | TGATAATAAGCCTTGTCTTT+CGG | - | chr2.4:23694535-23694554 | MS.gene95991:CDS | 30.0% |
| ! | TGATGATGAACTTACTTTCA+TGG | - | chr2.4:23694430-23694449 | MS.gene95991:CDS | 30.0% |
| ! | TTTTCTCTGTATCCTGAAAT+AGG | + | chr2.4:23694849-23694868 | None:intergenic | 30.0% |
| !! | TTTTGCAATTCTTGGTGATA+TGG | + | chr2.4:23695350-23695369 | None:intergenic | 30.0% |
| AAAGCTTACAAGCAATTTGG+AGG | + | chr2.4:23695473-23695492 | None:intergenic | 35.0% | |
| AAGCTTACAAGCAATTTGGA+GGG | + | chr2.4:23695472-23695491 | None:intergenic | 35.0% | |
| ACCTACTACATTCTACTAGA+CGG | + | chr2.4:23694768-23694787 | None:intergenic | 35.0% | |
| ACTCTTGTAAGAGATGTTGA+CGG | - | chr2.4:23695295-23695314 | MS.gene95991:intron | 35.0% | |
| AGGCAAAGTGATTATATCTG+AGG | - | chr2.4:23694565-23694584 | MS.gene95991:intron | 35.0% | |
| ATGTTGACGGTAAAACTTTC+TGG | - | chr2.4:23695308-23695327 | MS.gene95991:intron | 35.0% | |
| ATGTTTAGATTTCCATCACG+TGG | - | chr2.4:23693767-23693786 | MS.gene95991:CDS | 35.0% | |
| CAGTCGAAAGATGTTATTCA+AGG | - | chr2.4:23694957-23694976 | MS.gene95991:intron | 35.0% | |
| GAAAGACAAGGCTTATTATC+AGG | + | chr2.4:23694536-23694555 | None:intergenic | 35.0% | |
| TCAACTCATTTACGATAGAC+TGG | + | chr2.4:23694923-23694942 | None:intergenic | 35.0% | |
| TCATGACCTTGCCTTTAAAT+TGG | - | chr2.4:23694401-23694420 | MS.gene95991:intron | 35.0% | |
| TCGTATTCTAAGCTACGTAT+AGG | - | chr2.4:23694040-23694059 | MS.gene95991:CDS | 35.0% | |
| TGAAAGTTCCTTTCTTAAGG+GGG | + | chr2.4:23695429-23695448 | None:intergenic | 35.0% | |
| TGTGGATGCTACAATTGAAT+CGG | - | chr2.4:23695596-23695615 | MS.gene95991:intron | 35.0% | |
| TGTTGACGGTAAAACTTTCT+GGG | - | chr2.4:23695309-23695328 | MS.gene95991:intron | 35.0% | |
| TTCAATCAAGACCTTTGTAC+AGG | + | chr2.4:23693963-23693982 | None:intergenic | 35.0% | |
| ! | AATGAGTTGAATGCTTGGAA+AGG | - | chr2.4:23694933-23694952 | MS.gene95991:intron | 35.0% |
| ! | ATGAGTTGAATGCTTGGAAA+GGG | - | chr2.4:23694934-23694953 | MS.gene95991:intron | 35.0% |
| ! | TATGCTGATATCACTGATTG+TGG | - | chr2.4:23694365-23694384 | MS.gene95991:intron | 35.0% |
| ! | TCGTAAATGAGTTGAATGCT+TGG | - | chr2.4:23694928-23694947 | MS.gene95991:intron | 35.0% |
| ! | TTGGAAAATGGTCTTGAACA+AGG | + | chr2.4:23694991-23695010 | None:intergenic | 35.0% |
| !! | AGATGGACTATCAATGAATG+TGG | + | chr2.4:23694606-23694625 | None:intergenic | 35.0% |
| !! | TACAAAGTGTTGTGAGATAG+CGG | + | chr2.4:23695118-23695137 | None:intergenic | 35.0% |
| !!! | GTTGTTGGTTTTGCAATTCT+TGG | + | chr2.4:23695358-23695377 | None:intergenic | 35.0% |
| !!! | TTTTGCTATTATTGGCGTCA+AGG | - | chr2.4:23694872-23694891 | MS.gene95991:intron | 35.0% |
| AGCTTACAAGCAATTTGGAG+GGG | + | chr2.4:23695471-23695490 | None:intergenic | 40.0% | |
| ATTGTAGCATCCACAGTAGA+TGG | + | chr2.4:23695591-23695610 | None:intergenic | 40.0% | |
| CTTCAATCAGCAGAAAGTTC+TGG | + | chr2.4:23693930-23693949 | None:intergenic | 40.0% | |
| GGCAAATGCTGAATACATTG+AGG | - | chr2.4:23694184-23694203 | MS.gene95991:intron | 40.0% | |
| TATAGCAACGCTATAGCGTT+GGG | + | chr2.4:23695183-23695202 | None:intergenic | 40.0% | |
| TCAAGACCTTTGTACAGGTT+TGG | + | chr2.4:23693958-23693977 | None:intergenic | 40.0% | |
| TCCGTCTAGTAGAATGTAGT+AGG | - | chr2.4:23694764-23694783 | MS.gene95991:intron | 40.0% | |
| TTACGGGCCAAAAAATCCAA+AGG | + | chr2.4:23694739-23694758 | None:intergenic | 40.0% | |
| TTATAGCAACGCTATAGCGT+TGG | + | chr2.4:23695184-23695203 | None:intergenic | 40.0% | |
| TTGAGCAACTGAAGCTTTCA+AGG | + | chr2.4:23695679-23695698 | None:intergenic | 40.0% | |
| ! | AATCAGCAGAAAGTTCTGGT+AGG | + | chr2.4:23693926-23693945 | None:intergenic | 40.0% |
| ! | ATCCTTTTTGACAGACGAAG+AGG | - | chr2.4:23693702-23693721 | MS.gene95991:CDS | 40.0% |
| ! | GAACTTTCTGCTGATTGAAG+AGG | - | chr2.4:23693930-23693949 | MS.gene95991:intron | 40.0% |
| ! | GAGGGCGTAATTCCTAAATT+AGG | - | chr2.4:23693721-23693740 | MS.gene95991:CDS | 40.0% |
| ! | TCAGACATCTTTGAGTTTCC+CGG | - | chr2.4:23694229-23694248 | MS.gene95991:intron | 40.0% |
| ! | TCCTTTTTGACAGACGAAGA+GGG | - | chr2.4:23693703-23693722 | MS.gene95991:CDS | 40.0% |
| !! | CTTCGCTATTTTGCAGAAAC+CGG | - | chr2.4:23695512-23695531 | MS.gene95991:intron | 40.0% |
| AGCAACTGAAGCTTTCAAGG+AGG | + | chr2.4:23695676-23695695 | None:intergenic | 45.0% | |
| ATAGCAACGCTATAGCGTTG+GGG | + | chr2.4:23695182-23695201 | None:intergenic | 45.0% | |
| CCTGTAGTTACCGAAAGACA+AGG | + | chr2.4:23694548-23694567 | None:intergenic | 45.0% | |
| CCTTGTCTTTCGGTAACTAC+AGG | - | chr2.4:23694545-23694564 | MS.gene95991:intron | 45.0% | |
| CGCTATAGCGTTGCTATAAC+CGG | - | chr2.4:23695185-23695204 | MS.gene95991:CDS | 45.0% | |
| CGGTTTCTGCAAAATAGCGA+AGG | + | chr2.4:23695514-23695533 | None:intergenic | 45.0% | |
| GAGACAATCTTCTAGCGTTG+AGG | + | chr2.4:23693994-23694013 | None:intergenic | 45.0% | |
| GAGGATCCAAACCTGTACAA+AGG | - | chr2.4:23693949-23693968 | MS.gene95991:CDS | 45.0% | |
| GCAACTGAAGCTTTCAAGGA+GGG | + | chr2.4:23695675-23695694 | None:intergenic | 45.0% | |
| GCAGTTTCATCTGCAGTTGT+TGG | + | chr2.4:23695373-23695392 | None:intergenic | 45.0% | |
| GGCGATCTTGAAAGACACTA+CGG | + | chr2.4:23695408-23695427 | None:intergenic | 45.0% | |
| GTTAATGAGTCTGAGCAACC+CGG | + | chr2.4:23694251-23694270 | None:intergenic | 45.0% | |
| TATTCTCCGCGATCAGCTAT+TGG | + | chr2.4:23695075-23695094 | None:intergenic | 45.0% | |
| TTAATGAGTCTGAGCAACCC+GGG | + | chr2.4:23694250-23694269 | None:intergenic | 45.0% | |
| ! | AATCTTCTAGCGTTGAGGCT+TGG | + | chr2.4:23693989-23694008 | None:intergenic | 45.0% |
| ! | CAGACATCTTTGAGTTTCCC+GGG | - | chr2.4:23694230-23694249 | MS.gene95991:intron | 45.0% |
| ! | GGTATTTTATGGCGAGCCTT+TGG | - | chr2.4:23694720-23694739 | MS.gene95991:intron | 45.0% |
| !!! | TGGCGAGCCTTTGGATTTTT+TGG | - | chr2.4:23694729-23694748 | MS.gene95991:intron | 45.0% |
| AGAGGGGATTCCATCTACTG+TGG | - | chr2.4:23695578-23695597 | MS.gene95991:intron | 50.0% | |
| AGATTTCCATCACGTGGCTG+AGG | - | chr2.4:23693773-23693792 | MS.gene95991:CDS | 50.0% | |
| AGGTTTCTGTCTCGTCAGAG+GGG | - | chr2.4:23695562-23695581 | MS.gene95991:intron | 50.0% | |
| AGTCGCTTGAAAGTTCCGGT+AGG | - | chr2.4:23693833-23693852 | MS.gene95991:CDS | 50.0% | |
| CAAGATCGCCCCCTTAAGAA+AGG | - | chr2.4:23695418-23695437 | MS.gene95991:intron | 50.0% | |
| CAGCACGAAGTGTACGAGTT+GGG | - | chr2.4:23693801-23693820 | MS.gene95991:CDS | 50.0% | |
| CAGGTTTCTGTCTCGTCAGA+GGG | - | chr2.4:23695561-23695580 | MS.gene95991:intron | 50.0% | |
| CTCCAGTCGCTTGAAAGTTC+CGG | - | chr2.4:23693829-23693848 | MS.gene95991:CDS | 50.0% | |
| CTTGAAAGTTCCGGTAGGAC+AGG | - | chr2.4:23693838-23693857 | MS.gene95991:intron | 50.0% | |
| GCCCTCTTCGTCTGTCAAAA+AGG | + | chr2.4:23693707-23693726 | None:intergenic | 50.0% | |
| GCTTTCAAGGAGGGAGATAC+AGG | + | chr2.4:23695666-23695685 | None:intergenic | 50.0% | |
| GTGTTGCCAATAGCTGATCG+CGG | - | chr2.4:23695066-23695085 | MS.gene95991:intron | 50.0% | |
| TACCGGAACTTTCAAGCGAC+TGG | + | chr2.4:23693834-23693853 | None:intergenic | 50.0% | |
| TCAGCACGAAGTGTACGAGT+TGG | - | chr2.4:23693800-23693819 | MS.gene95991:CDS | 50.0% | |
| TCAGGTTTCTGTCTCGTCAG+AGG | - | chr2.4:23695560-23695579 | MS.gene95991:intron | 50.0% | |
| CCGGTAGGACAGGAAAGACA+CGG | - | chr2.4:23693848-23693867 | MS.gene95991:intron | 55.0% | |
| CCGTGTCTTTCCTGTCCTAC+CGG | + | chr2.4:23693851-23693870 | None:intergenic | 55.0% | |
| GATAGACCTCAGCCACGTGA+TGG | + | chr2.4:23693782-23693801 | None:intergenic | 55.0% | |
| GGCGTCAAGGTCTATGCTTC+TGG | - | chr2.4:23694885-23694904 | MS.gene95991:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 23693694 | 23695722 | 23693694 | ID=MS.gene95991 |
| chr2.4 | mRNA | 23693694 | 23695722 | 23693694 | ID=MS.gene95991.t1;Parent=MS.gene95991 |
| chr2.4 | exon | 23695674 | 23695722 | 23695674 | ID=MS.gene95991.t1.exon1;Parent=MS.gene95991.t1 |
| chr2.4 | CDS | 23695674 | 23695722 | 23695674 | ID=cds.MS.gene95991.t1;Parent=MS.gene95991.t1 |
| chr2.4 | exon | 23695132 | 23695233 | 23695132 | ID=MS.gene95991.t1.exon2;Parent=MS.gene95991.t1 |
| chr2.4 | CDS | 23695132 | 23695233 | 23695132 | ID=cds.MS.gene95991.t1;Parent=MS.gene95991.t1 |
| chr2.4 | exon | 23694405 | 23694560 | 23694405 | ID=MS.gene95991.t1.exon3;Parent=MS.gene95991.t1 |
| chr2.4 | CDS | 23694405 | 23694560 | 23694405 | ID=cds.MS.gene95991.t1;Parent=MS.gene95991.t1 |
| chr2.4 | exon | 23693933 | 23694147 | 23693933 | ID=MS.gene95991.t1.exon4;Parent=MS.gene95991.t1 |
| chr2.4 | CDS | 23693933 | 23694147 | 23693933 | ID=cds.MS.gene95991.t1;Parent=MS.gene95991.t1 |
| chr2.4 | exon | 23693694 | 23693852 | 23693694 | ID=MS.gene95991.t1.exon5;Parent=MS.gene95991.t1 |
| chr2.4 | CDS | 23693694 | 23693852 | 23693694 | ID=cds.MS.gene95991.t1;Parent=MS.gene95991.t1 |
| Gene Sequence |
| Protein sequence |
