AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056510.t1 MTR_8g070830 98.253 458 8 0 1 458 1 458 0.0 894
MS.gene056510.t1 MTR_8g070830 96.499 457 16 0 2 458 56 512 0.0 872
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056510.t1 AT1G32080 78.242 455 97 1 6 458 58 512 0.0 702

Find 106 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCAGCTGCAACTGATTC+TGG 0.157454 8.3:-31976176 MS.gene056510:CDS
TATGCTTTGAATGGCATATT+TGG 0.158340 8.3:-31971624 MS.gene056510:CDS
CAAAGCTTGCTTGCAGTTAT+TGG 0.161197 8.3:-31971570 MS.gene056510:CDS
CTTCTAAATTTCAGGTGTTT+GGG 0.199505 8.3:-31975844 MS.gene056510:intron
GCTTCTAAATTTCAGGTGTT+TGG 0.199890 8.3:-31975845 MS.gene056510:intron
TTTGTTCTATGTTCCTTCTT+TGG 0.215258 8.3:-31975603 MS.gene056510:CDS
TTAGGCTACATGGTTGGTTC+TGG 0.218146 8.3:-31974704 MS.gene056510:CDS
GAATCAGTTGCAGCTGATTT+AGG 0.237508 8.3:+31976179 None:intergenic
GTTACATTTGATTGTGTCTC+TGG 0.250545 8.3:-31975819 MS.gene056510:CDS
AAAGATATTCCTGCTGCTTC+TGG 0.265033 8.3:-31975560 MS.gene056510:CDS
CACACTTCTACTTGAGAAAA+AGG 0.275454 8.3:+31974836 None:intergenic
GAGGAATAGCAACTGCTTCT+AGG 0.305116 8.3:-31972291 MS.gene056510:intron
TTGTAGTAACTGGTCTGGTT+GGG 0.313010 8.3:-31972369 MS.gene056510:CDS
TTAGGGCTTGATCCTGTTCT+AGG 0.315315 8.3:-31974201 MS.gene056510:intron
TTATATTATCCAACATTACT+AGG 0.315566 8.3:-31974773 MS.gene056510:CDS
AGAACCCTTGTGCAAGAAAC+TGG 0.317703 8.3:+31976232 None:intergenic
CTAGCAACACTTTGTGTTGC+TGG 0.320037 8.3:-31974932 MS.gene056510:CDS
AAATTTCCTAGTGCATTGTT+TGG 0.322560 8.3:-31975740 MS.gene056510:CDS
AAGACCTTCTTCACATTTGA+TGG 0.329032 8.3:+31974291 None:intergenic
GATAGTGCACAGCAAATTAT+AGG 0.348590 8.3:+31974264 None:intergenic
CAATGCCACTGTTATACATC+TGG 0.356511 8.3:+31972574 None:intergenic
AGTATTGTGTCTCTGTTTGA+TGG 0.359340 8.3:-31972545 MS.gene056510:intron
ATCAAAATTTGTCTTATTGT+AGG 0.375935 8.3:-31975536 MS.gene056510:intron
AGCAAGCTTTGTCTCACAAT+TGG 0.379154 8.3:+31971582 None:intergenic
AACAAATAGACTCACATTAT+GGG 0.396850 8.3:+31976136 None:intergenic
TTACATTTGATTGTGTCTCT+GGG 0.397333 8.3:-31975818 MS.gene056510:CDS
TTGTACAGTGCTCATGGGCT+TGG 0.398929 8.3:-31971702 MS.gene056510:intron
GGGTAGAATGGACACGGTTA+AGG 0.400734 8.3:+31972595 None:intergenic
GTTGTAGTAACTGGTCTGGT+TGG 0.403509 8.3:-31972370 MS.gene056510:CDS
TTGCTTGCAGCCACAGTGTT+AGG 0.403656 8.3:-31974722 MS.gene056510:CDS
TAGGCTACATGGTTGGTTCT+GGG 0.405275 8.3:-31974703 MS.gene056510:intron
AATTTCCTAGTGCATTGTTT+GGG 0.407747 8.3:-31975739 MS.gene056510:CDS
ATGCACTAACAAATGATGTT+AGG 0.408262 8.3:+31974795 None:intergenic
GCAGCAGTGGTTGTAGTAAC+TGG 0.413600 8.3:-31972379 MS.gene056510:CDS
GCCATTGCTTATGCTTTGAA+TGG 0.428492 8.3:-31971633 MS.gene056510:CDS
ATTGATAGATGCCGAGCCTA+TGG 0.432006 8.3:-31974870 MS.gene056510:CDS
ACCAACACATCCGCCAATCC+TGG 0.433961 8.3:-31973430 MS.gene056510:CDS
CTGTACTCAACCGCCCTTGT+TGG 0.439304 8.3:-31972641 MS.gene056510:CDS
TGATTTAGGTAAAAGCTGTC+TGG 0.445209 8.3:+31976193 None:intergenic
CAATTCCAGTTTCTTGCACA+AGG 0.448452 8.3:-31976237 MS.gene056510:CDS
TGGGAGAGCCTCGGGTTCCT+TGG 0.451282 8.3:+31971662 None:intergenic
ATTAAAATGTCACCGGCTCC+AGG 0.451482 8.3:+31973412 None:intergenic
AGCCACAGTGTTAGGCTACA+TGG 0.453766 8.3:-31974714 MS.gene056510:CDS
AATCAGCTGCAACTGATTCT+GGG 0.461255 8.3:-31976175 MS.gene056510:CDS
CTTGAACATGGAGAAGGAAA+AGG 0.461660 8.3:+31973363 None:intergenic
TGTTATACATCTGGGTAGAA+TGG 0.468571 8.3:+31972583 None:intergenic
TGTAGTAACTGGTCTGGTTG+GGG 0.478418 8.3:-31972368 MS.gene056510:CDS
GGAATATCTTTAACAGAAAG+AGG 0.478846 8.3:+31975572 None:intergenic
AATGTCACCGGCTCCAGGAT+TGG 0.485028 8.3:+31973417 None:intergenic
TCTATATTCAGCTTGTGAAA+AGG 0.487582 8.3:-31972712 MS.gene056510:intron
AGAGGCAAGACAACCAAAGA+AGG 0.490598 8.3:+31975590 None:intergenic
GTTGCTATTCCTCGAGCAAT+CGG 0.491772 8.3:+31972301 None:intergenic
TGCTGCTGTGAGAGATGGAT+TGG 0.493491 8.3:+31972396 None:intergenic
TTCTAAATTTCAGGTGTTTG+GGG 0.493596 8.3:-31975843 MS.gene056510:intron
GCACAGAATGGGAGAGCCTC+GGG 0.496817 8.3:+31971654 None:intergenic
AAGAAGGAACATAGAACAAA+GGG 0.497702 8.3:+31975606 None:intergenic
TACCTTTCTTTGCTTGAACA+TGG 0.497827 8.3:+31973351 None:intergenic
TCTTCAAACATACCTAGAAC+AGG 0.498431 8.3:+31974189 None:intergenic
CATAAGCAATGGCACAGAAT+GGG 0.505150 8.3:+31971643 None:intergenic
CTCCATGTTCAAGCAAAGAA+AGG 0.505835 8.3:-31973353 MS.gene056510:intron
GCATAAGCAATGGCACAGAA+TGG 0.508038 8.3:+31971642 None:intergenic
GTAGAAGTGTGGACATGGAC+TGG 0.509059 8.3:-31974824 MS.gene056510:CDS
GCACTTGTCCCTAGTAATGT+TGG 0.511190 8.3:+31974764 None:intergenic
AGTGGTTGTAGTAACTGGTC+TGG 0.515558 8.3:-31972374 MS.gene056510:CDS
CTCAAGTAGAAGTGTGGACA+TGG 0.516835 8.3:-31974829 MS.gene056510:CDS
TAGAAGTGTGGACATGGACT+GGG 0.517178 8.3:-31974823 MS.gene056510:CDS
TCCAGGATTGGCGGATGTGT+TGG 0.519000 8.3:+31973429 None:intergenic
CGTTTATGTTCATTCAGAGA+TGG 0.524171 8.3:-31975631 MS.gene056510:CDS
CAGATGTATAACAGTGGCAT+TGG 0.527877 8.3:-31972573 MS.gene056510:CDS
TCTTTGCTTGAACATGGAGA+AGG 0.534777 8.3:+31973357 None:intergenic
ACCACTGCTGCTGTGAGAGA+TGG 0.540976 8.3:+31972391 None:intergenic
TTGATAGATGCCGAGCCTAT+GGG 0.541137 8.3:-31974869 MS.gene056510:CDS
GGCACAGAATGGGAGAGCCT+CGG 0.541560 8.3:+31971653 None:intergenic
ATCACTGCTGTAGCTGCAGA+TGG 0.546938 8.3:+31975671 None:intergenic
AAAGAAGGAACATAGAACAA+AGG 0.555936 8.3:+31975605 None:intergenic
AATGTTGTTCAGTTGGAGGA+TGG 0.558237 8.3:-31974955 MS.gene056510:intron
ACATCCGCCAATCCTGGAGC+CGG 0.558920 8.3:-31973424 MS.gene056510:CDS
GTTGCCATCAAATGTGAAGA+AGG 0.560001 8.3:-31974295 MS.gene056510:CDS
TATATTATCCAACATTACTA+GGG 0.568581 8.3:-31974772 MS.gene056510:CDS
GTCACCGGCTCCAGGATTGG+CGG 0.574214 8.3:+31973420 None:intergenic
GATTGGCGGATGTGTTGGTA+AGG 0.574376 8.3:+31973434 None:intergenic
AATGCCACTGTTATACATCT+GGG 0.582864 8.3:+31972575 None:intergenic
AAATCCCATTAAAATGTCAC+CGG 0.587350 8.3:+31973405 None:intergenic
AAAGGTGACGGCTTTCCCAT+AGG 0.587676 8.3:+31974854 None:intergenic
TGACGGCTTTCCCATAGGCT+CGG 0.590573 8.3:+31974859 None:intergenic
TTTAGTGATCCGATTGCTCG+AGG 0.598429 8.3:-31972310 MS.gene056510:CDS
GTGCACAGCAAATTATAGGA+TGG 0.607605 8.3:+31974268 None:intergenic
TACATTTGATTGTGTCTCTG+GGG 0.614718 8.3:-31975817 MS.gene056510:CDS
AACAGCAGCATTGTCTGCCA+AGG 0.617766 8.3:-31971679 MS.gene056510:CDS
TCCATCTCTCACAGCAGCAG+TGG 0.618490 8.3:-31972392 MS.gene056510:CDS
GCCATTCAAAGCATAAGCAA+TGG 0.618845 8.3:+31971632 None:intergenic
AGAATGGACACGGTTAAGGA+TGG 0.628632 8.3:+31972599 None:intergenic
ATTGAACAAGACGTCCAACA+AGG 0.633045 8.3:+31972627 None:intergenic
AACATCCCAAACAATGCACT+AGG 0.636833 8.3:+31975734 None:intergenic
AAACAGAGACACAATACTGA+GGG 0.638521 8.3:+31972550 None:intergenic
CTCTGAATGAACATAAACGC+AGG 0.640762 8.3:+31975635 None:intergenic
ACAGTGTTAGGCTACATGGT+TGG 0.644874 8.3:-31974710 MS.gene056510:CDS
AATTCCAGTTTCTTGCACAA+GGG 0.648983 8.3:-31976236 MS.gene056510:CDS
AGCAAATGCTGTCAAAACTG+CGG 0.664146 8.3:+31974242 None:intergenic
AACAAGACGTCCAACAAGGG+CGG 0.666041 8.3:+31972631 None:intergenic
TTGAACAAGACGTCCAACAA+GGG 0.670786 8.3:+31972628 None:intergenic
ATTGTCTGCCAAGGAACCCG+AGG 0.674254 8.3:-31971670 MS.gene056510:CDS
AACCATGTAGCCTAACACTG+TGG 0.702297 8.3:+31974712 None:intergenic
ACATCTGGGTAGAATGGACA+CGG 0.704145 8.3:+31972589 None:intergenic
TCTACCCAGATGTATAACAG+TGG 0.727669 8.3:-31972579 MS.gene056510:CDS
CAAACAGAGACACAATACTG+AGG 0.731160 8.3:+31972549 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAAATATACATTAT+AGG + chr8.3:31973873-31973892 None:intergenic 10.0%
!! AACAAAAAATATACATTATA+GGG + chr8.3:31973872-31973891 None:intergenic 10.0%
!!! ATAAACTATTTTATAACAAA+AGG - chr8.3:31974721-31974740 MS.gene056510:CDS 10.0%
!! ATGTATAGACTAAATAAAAA+CGG + chr8.3:31975669-31975688 None:intergenic 15.0%
!! TTATAGATGCTTAAATAATT+AGG - chr8.3:31972703-31972722 MS.gene056510:CDS 15.0%
!!! AAAATAGAAATTTTCAATGA+TGG + chr8.3:31975379-31975398 None:intergenic 15.0%
!!! ACATTTTTGAATTTATTTAC+TGG + chr8.3:31974896-31974915 None:intergenic 15.0%
!!! ATTGATTCAGATTTAAATTT+GGG - chr8.3:31972664-31972683 MS.gene056510:CDS 15.0%
!!! ATTTGCTATTTATTTATTGT+TGG - chr8.3:31972321-31972340 MS.gene056510:CDS 15.0%
!!! GTAATTCAATTTTTTATTTG+AGG - chr8.3:31973459-31973478 MS.gene056510:intron 15.0%
!!! TATTTGTTTCTATTCATTTT+GGG - chr8.3:31971687-31971706 MS.gene056510:CDS 15.0%
!!! TGGAAAACAATTTTTTTATT+TGG + chr8.3:31975008-31975027 None:intergenic 15.0%
!! AAAACAACTTATAGCTTATA+TGG + chr8.3:31974768-31974787 None:intergenic 20.0%
!! AATGATACCATCTTAAAATT+TGG - chr8.3:31975867-31975886 MS.gene056510:intron 20.0%
!! AGTATAAGATTTATTTCATG+AGG + chr8.3:31974499-31974518 None:intergenic 20.0%
!! AGTTTAGTTAAAATGAGTTT+AGG + chr8.3:31971835-31971854 None:intergenic 20.0%
!! ATATATTTATCAGTAATGAG+AGG + chr8.3:31974197-31974216 None:intergenic 20.0%
!! ATGATACCATCTTAAAATTT+GGG - chr8.3:31975868-31975887 MS.gene056510:intron 20.0%
!! CTATTTATTTATTGTTGGAT+TGG - chr8.3:31972326-31972345 MS.gene056510:CDS 20.0%
!! CTTAAAATTATTGATCAGAT+AGG - chr8.3:31971733-31971752 MS.gene056510:intron 20.0%
!! GAATATAGAAAACAAATCAA+TGG + chr8.3:31975085-31975104 None:intergenic 20.0%
!! GTTTAGTTAAAATGAGTTTA+GGG + chr8.3:31971834-31971853 None:intergenic 20.0%
!! TATAAAAGCTAAACTCATAA+AGG + chr8.3:31973220-31973239 None:intergenic 20.0%
!! TATATTATCCAACATTACTA+GGG - chr8.3:31973036-31973055 MS.gene056510:intron 20.0%
!! TCTCATTACTGATAAATATA+TGG - chr8.3:31974196-31974215 MS.gene056510:intron 20.0%
!! TTATATTATCCAACATTACT+AGG - chr8.3:31973035-31973054 MS.gene056510:intron 20.0%
!! TTGAAAATGAGTTTATAAGT+GGG + chr8.3:31975943-31975962 None:intergenic 20.0%
!! TTTGAAAATGAGTTTATAAG+TGG + chr8.3:31975944-31975963 None:intergenic 20.0%
!!! AAAGATACTTTTTAAACTTC+AGG - chr8.3:31974024-31974043 MS.gene056510:intron 20.0%
!!! AAGAAGAATTTGTATTGATT+CGG - chr8.3:31976015-31976034 MS.gene056510:intron 20.0%
!!! AAGATACTTTTTAAACTTCA+GGG - chr8.3:31974025-31974044 MS.gene056510:intron 20.0%
!!! AATTTTATTACCAACTGTTA+TGG - chr8.3:31973433-31973452 MS.gene056510:CDS 20.0%
!!! ATAGTCTTAAAATTTAGGTT+AGG - chr8.3:31975699-31975718 MS.gene056510:CDS 20.0%
!!! ATCAAAATTTGTCTTATTGT+AGG - chr8.3:31972272-31972291 MS.gene056510:intron 20.0%
!!! ATTTTTTGCTTCTAAATTTC+AGG - chr8.3:31971956-31971975 MS.gene056510:intron 20.0%
!!! CTATTTGTTTCTATTCATTT+TGG - chr8.3:31971686-31971705 MS.gene056510:CDS 20.0%
!!! GATTGATTCAGATTTAAATT+TGG - chr8.3:31972663-31972682 MS.gene056510:CDS 20.0%
!!! GTAAAGAGTTTTTCATTTTA+TGG - chr8.3:31974116-31974135 MS.gene056510:intron 20.0%
!!! TATTTATTTCTCATTAGTGT+CGG + chr8.3:31973965-31973984 None:intergenic 20.0%
!!! TTACTTATTCTTTTTGTTCT+TGG - chr8.3:31974585-31974604 MS.gene056510:intron 20.0%
!!! TTTTTTATTTGGTTAGTGAT+TGG + chr8.3:31974997-31975016 None:intergenic 20.0%
! AAACAAATAGACTCACATTA+TGG + chr8.3:31971676-31971695 None:intergenic 25.0%
! AACAAATAGACTCACATTAT+GGG + chr8.3:31971675-31971694 None:intergenic 25.0%
! AATCAATGGTTAATGAGTAA+CGG + chr8.3:31975071-31975090 None:intergenic 25.0%
! ACTCGTAATATAACTAGAAA+TGG - chr8.3:31975985-31976004 MS.gene056510:intron 25.0%
! AGCATCCATTTAATGATTAT+TGG + chr8.3:31975321-31975340 None:intergenic 25.0%
! AGTTAATTATCAACCAAAGT+TGG + chr8.3:31973679-31973698 None:intergenic 25.0%
! ATTATCTGCTAAAATTCACT+AGG + chr8.3:31975850-31975869 None:intergenic 25.0%
! CTTTGACTATAAAATTTACC+AGG + chr8.3:31974291-31974310 None:intergenic 25.0%
! GCATCCATTTAATGATTATT+GGG + chr8.3:31975320-31975339 None:intergenic 25.0%
! GTTTGAATTCATATCCTATT+TGG + chr8.3:31974923-31974942 None:intergenic 25.0%
! TATAGACTAAATAAAAACGG+TGG + chr8.3:31975666-31975685 None:intergenic 25.0%
! TCAAAAATGTCAATCCAAAT+AGG - chr8.3:31974906-31974925 MS.gene056510:CDS 25.0%
! TCATCCCAATAATCATTAAA+TGG - chr8.3:31975313-31975332 MS.gene056510:intron 25.0%
! TCTTAATAATGTTGTTCAGT+TGG - chr8.3:31972846-31972865 MS.gene056510:intron 25.0%
! TGTAGAGACTAAAACAAAAA+AGG - chr8.3:31973988-31974007 MS.gene056510:intron 25.0%
! TTAATGATTATTGGGATGAA+CGG + chr8.3:31975312-31975331 None:intergenic 25.0%
! TTTGGATAAACAACTCAATT+AGG - chr8.3:31974654-31974673 MS.gene056510:intron 25.0%
! TTTGTTCTTGGTAAATCATT+GGG - chr8.3:31974597-31974616 MS.gene056510:intron 25.0%
!! AAATTTGTCTTATTGTAGGT+TGG - chr8.3:31972276-31972295 MS.gene056510:intron 25.0%
!! AATTTCTATTTTCTGTGTAC+AGG - chr8.3:31975387-31975406 MS.gene056510:intron 25.0%
!! ATTGAGTTGTTTATCCAAAA+AGG + chr8.3:31974653-31974672 None:intergenic 25.0%
!! ATTTTAAACCTTGTGTGAAT+AGG + chr8.3:31973182-31973201 None:intergenic 25.0%
!! GATAGGATTAATAGCTTTTA+TGG - chr8.3:31971750-31971769 MS.gene056510:intron 25.0%
!! GTCAGATAGTCTTAAAATTT+AGG - chr8.3:31975694-31975713 MS.gene056510:CDS 25.0%
!! TAAGTCTTCATAATCACTTT+TGG + chr8.3:31971717-31971736 None:intergenic 25.0%
!! TTGAGTTGTTTATCCAAAAA+GGG + chr8.3:31974652-31974671 None:intergenic 25.0%
!! TTTTAAACCTTGTGTGAATA+GGG + chr8.3:31973181-31973200 None:intergenic 25.0%
!! TTTTATAGTCAAAGCCATTT+CGG - chr8.3:31974297-31974316 MS.gene056510:CDS 25.0%
!! TTTTGTTCTTGGTAAATCAT+TGG - chr8.3:31974596-31974615 MS.gene056510:intron 25.0%
!!! ACTTTGGTTGATAATTAACT+AGG - chr8.3:31973679-31973698 MS.gene056510:intron 25.0%
!!! AGAAGAATTTGTATTGATTC+GGG - chr8.3:31976016-31976035 MS.gene056510:intron 25.0%
!!! AGAGTTTGATTTAAGTTGAA+GGG - chr8.3:31974626-31974645 MS.gene056510:intron 25.0%
!!! ATCCAAATTCAATTTTAGTG+CGG + chr8.3:31975600-31975619 None:intergenic 25.0%
!!! CAGATTTTGAAAAGAAAACT+TGG + chr8.3:31972773-31972792 None:intergenic 25.0%
!!! GACATTTTAATGGGATTTTT+GGG - chr8.3:31974408-31974427 MS.gene056510:intron 25.0%
!!! TAGAGTTTGATTTAAGTTGA+AGG - chr8.3:31974625-31974644 MS.gene056510:intron 25.0%
!!! TGACATTTTAATGGGATTTT+TGG - chr8.3:31974407-31974426 MS.gene056510:intron 25.0%
AAAGAAGGAACATAGAACAA+AGG + chr8.3:31972206-31972225 None:intergenic 30.0%
AAAGATATATCATGCCGAAA+TGG + chr8.3:31974314-31974333 None:intergenic 30.0%
AAATACAACAATGTCTCGTT+TGG - chr8.3:31974542-31974561 MS.gene056510:intron 30.0%
AAATCCCATTAAAATGTCAC+CGG + chr8.3:31974406-31974425 None:intergenic 30.0%
AAATTTCCTAGTGCATTGTT+TGG - chr8.3:31972068-31972087 MS.gene056510:intron 30.0%
AAGAAAGGTAAACCATCTAT+AGG - chr8.3:31974470-31974489 MS.gene056510:intron 30.0%
AAGAAGGAACATAGAACAAA+GGG + chr8.3:31972205-31972224 None:intergenic 30.0%
AAGAGAATTAAGTCTGTACA+AGG + chr8.3:31974973-31974992 None:intergenic 30.0%
AAGCTATCATGTAGAACTTA+CGG - chr8.3:31974791-31974810 MS.gene056510:CDS 30.0%
AATTACTCGTTCATGAAAGT+TGG - chr8.3:31973651-31973670 MS.gene056510:intron 30.0%
AATTAGTCCACGTACAATAT+AGG - chr8.3:31973921-31973940 MS.gene056510:intron 30.0%
AATTTCCTAGTGCATTGTTT+GGG - chr8.3:31972069-31972088 MS.gene056510:intron 30.0%
ACTAAATAAAAACGGTGGTA+TGG + chr8.3:31975661-31975680 None:intergenic 30.0%
ACTGACACAACTTTACAATA+GGG + chr8.3:31974098-31974117 None:intergenic 30.0%
AGACTGTTATTGAAAGCTTA+TGG + chr8.3:31974859-31974878 None:intergenic 30.0%
AGGATTTCTCACTTGATTTA+TGG + chr8.3:31974177-31974196 None:intergenic 30.0%
AGGGTGAAATAATCTATGTT+TGG + chr8.3:31971815-31971834 None:intergenic 30.0%
AGTTGCATATTTCAAGACAT+TGG + chr8.3:31973832-31973851 None:intergenic 30.0%
ATAAAATTTACCAGGCATAG+TGG + chr8.3:31974283-31974302 None:intergenic 30.0%
ATGCACTAACAAATGATGTT+AGG + chr8.3:31973016-31973035 None:intergenic 30.0%
ATTAGTCCACGTACAATATA+GGG - chr8.3:31973922-31973941 MS.gene056510:intron 30.0%
CTAAATAAAAACGGTGGTAT+GGG + chr8.3:31975660-31975679 None:intergenic 30.0%
CTAATTCAACCATACAAAAC+CGG - chr8.3:31975723-31975742 MS.gene056510:CDS 30.0%
GAATTACATACCATAACAGT+TGG + chr8.3:31973446-31973465 None:intergenic 30.0%
GGAATATCTTTAACAGAAAG+AGG + chr8.3:31972239-31972258 None:intergenic 30.0%
GGTATGAGAAAGAAAAATGT+TGG + chr8.3:31975028-31975047 None:intergenic 30.0%
GTTGCATATTTCAAGACATT+GGG + chr8.3:31973831-31973850 None:intergenic 30.0%
TAATAATGTTGTTCAGTTGG+AGG - chr8.3:31972849-31972868 MS.gene056510:intron 30.0%
TACTGACACAACTTTACAAT+AGG + chr8.3:31974099-31974118 None:intergenic 30.0%
TCAAAATATGCACATCATAC+AGG + chr8.3:31972801-31972820 None:intergenic 30.0%
TCTATATTCAGCTTGTGAAA+AGG - chr8.3:31975096-31975115 MS.gene056510:intron 30.0%
TTACATTTGATTGTGTCTCT+GGG - chr8.3:31971990-31972009 MS.gene056510:intron 30.0%
TTATATTACGAGTTTCACGA+TGG + chr8.3:31975978-31975997 None:intergenic 30.0%
TTGATGCATGTTTGATGTTT+GGG - chr8.3:31972817-31972836 MS.gene056510:intron 30.0%
TTGCATATTTCAAGACATTG+GGG + chr8.3:31973830-31973849 None:intergenic 30.0%
TTTGATGCATGTTTGATGTT+TGG - chr8.3:31972816-31972835 MS.gene056510:intron 30.0%
TTTGTTCTATGTTCCTTCTT+TGG - chr8.3:31972205-31972224 MS.gene056510:intron 30.0%
! AAATTTTGTACAGTGCTCAT+GGG - chr8.3:31976101-31976120 MS.gene056510:intron 30.0%
! CTTCTAAATTTCAGGTGTTT+GGG - chr8.3:31971964-31971983 MS.gene056510:intron 30.0%
! CTTCTTAGTTCTCAATATCA+GGG + chr8.3:31972479-31972498 None:intergenic 30.0%
! TATGCTTTGAATGGCATATT+TGG - chr8.3:31976184-31976203 MS.gene056510:CDS 30.0%
! TTCTAAATTTCAGGTGTTTG+GGG - chr8.3:31971965-31971984 MS.gene056510:intron 30.0%
!! CTAAAACAAAAAAGGCATTG+AGG - chr8.3:31973996-31974015 MS.gene056510:intron 30.0%
!! TCCAAATTCAATTTTAGTGC+GGG + chr8.3:31975599-31975618 None:intergenic 30.0%
!! TCGGGTATTTTTCAAAGTTA+GGG - chr8.3:31973590-31973609 MS.gene056510:intron 30.0%
!! TTCGGGTATTTTTCAAAGTT+AGG - chr8.3:31973589-31973608 MS.gene056510:intron 30.0%
!!! CTTAAGAAAGTGCTTGATTT+TGG + chr8.3:31974052-31974071 None:intergenic 30.0%
!!! TGTTGCTGTTATTTTCTTTC+AGG - chr8.3:31973491-31973510 MS.gene056510:intron 30.0%
AAAACCAAGTTGTAAGGTGA+GGG - chr8.3:31975911-31975930 MS.gene056510:intron 35.0%
AAACAGAGACACAATACTGA+GGG + chr8.3:31975261-31975280 None:intergenic 35.0%
AAGACCTTCTTCACATTTGA+TGG + chr8.3:31973520-31973539 None:intergenic 35.0%
AATGCCACTGTTATACATCT+GGG + chr8.3:31975236-31975255 None:intergenic 35.0%
AATTCCAGTTTCTTGCACAA+GGG - chr8.3:31971572-31971591 MS.gene056510:CDS 35.0%
AATTTGGGTATGCTGATCAA+TGG - chr8.3:31972679-31972698 MS.gene056510:CDS 35.0%
ACTCTTCTCTCAACATTCAT+AGG - chr8.3:31974345-31974364 MS.gene056510:intron 35.0%
ACTGACACATACATAAACAC+CGG - chr8.3:31972500-31972519 MS.gene056510:intron 35.0%
AGTATTGTGTCTCTGTTTGA+TGG - chr8.3:31975263-31975282 MS.gene056510:intron 35.0%
ATGCTTGACTGTTTGTCATT+CGG + chr8.3:31973761-31973780 None:intergenic 35.0%
CACACTTCTACTTGAGAAAA+AGG + chr8.3:31972975-31972994 None:intergenic 35.0%
CCCTTAGTAATTGGAGAAAA+CGG - chr8.3:31972544-31972563 MS.gene056510:intron 35.0%
CCTTACAAAACCAAGTTGTA+AGG - chr8.3:31975905-31975924 MS.gene056510:intron 35.0%
CGTTTATGTTCATTCAGAGA+TGG - chr8.3:31972177-31972196 MS.gene056510:intron 35.0%
CTCAAGTCAATAAAACACTG+AGG + chr8.3:31972732-31972751 None:intergenic 35.0%
GAATTCAAACTTGAAGAGCA+TGG - chr8.3:31974933-31974952 MS.gene056510:CDS 35.0%
GATAGTGCACAGCAAATTAT+AGG + chr8.3:31973547-31973566 None:intergenic 35.0%
GTCAAGCATTTCAAATCTTC+TGG - chr8.3:31973772-31973791 MS.gene056510:intron 35.0%
GTTACATTTGATTGTGTCTC+TGG - chr8.3:31971989-31972008 MS.gene056510:intron 35.0%
TACATTTGATTGTGTCTCTG+GGG - chr8.3:31971991-31972010 MS.gene056510:intron 35.0%
TACCTTTCTTTGCTTGAACA+TGG + chr8.3:31974460-31974479 None:intergenic 35.0%
TCCCGCACTAAAATTGAATT+TGG - chr8.3:31975595-31975614 MS.gene056510:CDS 35.0%
TCTACTTGAGAAAAAGGTGA+CGG + chr8.3:31972969-31972988 None:intergenic 35.0%
TCTTCAAACATACCTAGAAC+AGG + chr8.3:31973622-31973641 None:intergenic 35.0%
TGAATTTGGATTATGCACTC+TGG - chr8.3:31975609-31975628 MS.gene056510:CDS 35.0%
TGATTTAGGTAAAAGCTGTC+TGG + chr8.3:31971618-31971637 None:intergenic 35.0%
TGTTATACATCTGGGTAGAA+TGG + chr8.3:31975228-31975247 None:intergenic 35.0%
TTATCACATGCTGATGCTAT+TGG - chr8.3:31973410-31973429 MS.gene056510:CDS 35.0%
TTCATGAGGAAACCTATAGA+TGG + chr8.3:31974485-31974504 None:intergenic 35.0%
TTTAGTCCCTATATTGTACG+TGG + chr8.3:31973931-31973950 None:intergenic 35.0%
! AAAGAAAAACCGGTTTCCTT+AGG + chr8.3:31973805-31973824 None:intergenic 35.0%
! ATGCAGAGATAAAGGCTTTT+TGG + chr8.3:31975576-31975595 None:intergenic 35.0%
! CAAATTTTGTACAGTGCTCA+TGG - chr8.3:31976100-31976119 MS.gene056510:intron 35.0%
! CAGTGTAAAACGTTTTACAC+TGG + chr8.3:31973265-31973246 None:intergenic 35.0%
! CCGTTTTCTCCAATTACTAA+GGG + chr8.3:31972547-31972566 None:intergenic 35.0%
! CTCAATATCAGGGATCATTT+TGG + chr8.3:31972469-31972488 None:intergenic 35.0%
! CTTTTTCTCAAGTAGAAGTG+TGG - chr8.3:31972973-31972992 MS.gene056510:intron 35.0%
! GCTTCTAAATTTCAGGTGTT+TGG - chr8.3:31971963-31971982 MS.gene056510:intron 35.0%
! GCTTCTTAGTTCTCAATATC+AGG + chr8.3:31972480-31972499 None:intergenic 35.0%
! TCCGTTTTCTCCAATTACTA+AGG + chr8.3:31972548-31972567 None:intergenic 35.0%
! TTTTGACAGCATTTGCTTTC+GGG - chr8.3:31973572-31973591 MS.gene056510:intron 35.0%
!! GCTCAACCCAAATTTTAAGA+TGG + chr8.3:31975877-31975896 None:intergenic 35.0%
!! GTTTTGACAGCATTTGCTTT+CGG - chr8.3:31973571-31973590 MS.gene056510:intron 35.0%
!! TTAGCTTTGCTTTCACATCA+CGG - chr8.3:31974243-31974262 MS.gene056510:CDS 35.0%
!! TTTATGGTGCTGTATTGTGA+TGG - chr8.3:31974132-31974151 MS.gene056510:intron 35.0%
!!! CCTTACAACTTGGTTTTGTA+AGG + chr8.3:31975908-31975927 None:intergenic 35.0%
AACATCCCAAACAATGCACT+AGG + chr8.3:31972077-31972096 None:intergenic 40.0%
AATGTTGTTCAGTTGGAGGA+TGG - chr8.3:31972853-31972872 MS.gene056510:intron 40.0%
ACATCTCTCATCTTACAAGC+CGG + chr8.3:31975745-31975764 None:intergenic 40.0%
ACGGATACACCCTTAGTAAT+TGG - chr8.3:31972535-31972554 MS.gene056510:intron 40.0%
AGCAAATGCTGTCAAAACTG+CGG + chr8.3:31973569-31973588 None:intergenic 40.0%
ATCTTCTGGCAAGTTACCTA+AGG - chr8.3:31973786-31973805 MS.gene056510:intron 40.0%
ATTGAACAAGACGTCCAACA+AGG + chr8.3:31975184-31975203 None:intergenic 40.0%
ATTTGGATTATGCACTCTGG+TGG - chr8.3:31975612-31975631 MS.gene056510:CDS 40.0%
CAAAACCAAGTTGTAAGGTG+AGG - chr8.3:31975910-31975929 MS.gene056510:intron 40.0%
CAAACAGAGACACAATACTG+AGG + chr8.3:31975262-31975281 None:intergenic 40.0%
CAAGCACTTTCTTAAGCTGA+GGG - chr8.3:31974056-31974075 MS.gene056510:intron 40.0%
CAATGCCACTGTTATACATC+TGG + chr8.3:31975237-31975256 None:intergenic 40.0%
CAATTCCAGTTTCTTGCACA+AGG - chr8.3:31971571-31971590 MS.gene056510:CDS 40.0%
CAGATGTATAACAGTGGCAT+TGG - chr8.3:31975235-31975254 MS.gene056510:intron 40.0%
CATAAGCAATGGCACAGAAT+GGG + chr8.3:31976168-31976187 None:intergenic 40.0%
CATTGGGGACAAAGAAAAAC+CGG + chr8.3:31973815-31973834 None:intergenic 40.0%
CTATGTGATACTGACACTTC+AGG + chr8.3:31972644-31972663 None:intergenic 40.0%
CTCATACCGTAGTTAAACAG+CGG - chr8.3:31975040-31975059 MS.gene056510:intron 40.0%
CTCCATGTTCAAGCAAAGAA+AGG - chr8.3:31974455-31974474 MS.gene056510:intron 40.0%
CTCTGAATGAACATAAACGC+AGG + chr8.3:31972176-31972195 None:intergenic 40.0%
CTTGAACATGGAGAAGGAAA+AGG + chr8.3:31974448-31974467 None:intergenic 40.0%
GCCATTCAAAGCATAAGCAA+TGG + chr8.3:31976179-31976198 None:intergenic 40.0%
GTAATTGGAGAAAACGGAAG+TGG - chr8.3:31972550-31972569 MS.gene056510:CDS 40.0%
GTAGTAGTGTGTGTTTGGTT+TGG + chr8.3:31971908-31971927 None:intergenic 40.0%
GTGCACAGCAAATTATAGGA+TGG + chr8.3:31973543-31973562 None:intergenic 40.0%
GTTGCCATCAAATGTGAAGA+AGG - chr8.3:31973513-31973532 MS.gene056510:intron 40.0%
GTTTAGCCGCTGTTTAACTA+CGG + chr8.3:31975049-31975068 None:intergenic 40.0%
TACCATTTCGAGGACTACAA+CGG + chr8.3:31972400-31972419 None:intergenic 40.0%
TCAAGCACTTTCTTAAGCTG+AGG - chr8.3:31974055-31974074 MS.gene056510:intron 40.0%
TCTACCCAGATGTATAACAG+TGG - chr8.3:31975229-31975248 MS.gene056510:intron 40.0%
TCTTTGCTTGAACATGGAGA+AGG + chr8.3:31974454-31974473 None:intergenic 40.0%
TGTCAGTGTCATACAAGTGT+TGG - chr8.3:31972590-31972609 MS.gene056510:CDS 40.0%
TTGAACAAGACGTCCAACAA+GGG + chr8.3:31975183-31975202 None:intergenic 40.0%
TTGTAGTCCTCGAAATGGTA+GGG - chr8.3:31972400-31972419 MS.gene056510:CDS 40.0%
TTGTATGACACTGACATGTG+TGG + chr8.3:31972586-31972605 None:intergenic 40.0%
! AAAGATATTCCTGCTGCTTC+TGG - chr8.3:31972248-31972267 MS.gene056510:intron 40.0%
! AAATCAGCTGCAACTGATTC+TGG - chr8.3:31971632-31971651 MS.gene056510:CDS 40.0%
! AATCAGCTGCAACTGATTCT+GGG - chr8.3:31971633-31971652 MS.gene056510:CDS 40.0%
! AGCAAGCTTTGTCTCACAAT+TGG + chr8.3:31976229-31976248 None:intergenic 40.0%
! CAAAGCTTGCTTGCAGTTAT+TGG - chr8.3:31976238-31976257 MS.gene056510:CDS 40.0%
! GAATCAGTTGCAGCTGATTT+AGG + chr8.3:31971632-31971651 None:intergenic 40.0%
! GCCATTGCTTATGCTTTGAA+TGG - chr8.3:31976175-31976194 MS.gene056510:CDS 40.0%
! TTGATGGTAAGTATCATGCC+TGG - chr8.3:31975279-31975298 MS.gene056510:intron 40.0%
! TTGTAGTAACTGGTCTGGTT+GGG - chr8.3:31975439-31975458 MS.gene056510:intron 40.0%
!! ATACTGACACTTCAGGTTGA+AGG + chr8.3:31972637-31972656 None:intergenic 40.0%
!! ATGAAAGTTGGTGCCAACTT+TGG - chr8.3:31973663-31973682 MS.gene056510:intron 40.0%
!! ATTCGGTGTTTGCAATCAGA+AGG + chr8.3:31973744-31973763 None:intergenic 40.0%
!! GCTTTTTCCCTATTCACACA+AGG - chr8.3:31973171-31973190 MS.gene056510:intron 40.0%
!! GTGTTTGGTTTGGTTCTAAG+TGG + chr8.3:31971898-31971917 None:intergenic 40.0%
!! TCTTACAAGCCGGTTTTGTA+TGG + chr8.3:31975735-31975754 None:intergenic 40.0%
!!! TTAAGTTGAAGGGCCCTTTT+TGG - chr8.3:31974636-31974655 MS.gene056510:intron 40.0%
AACCATGTAGCCTAACACTG+TGG + chr8.3:31973099-31973118 None:intergenic 45.0%
ACAGTGTTAGGCTACATGGT+TGG - chr8.3:31973098-31973117 MS.gene056510:intron 45.0%
ACATCTGGGTAGAATGGACA+CGG + chr8.3:31975222-31975241 None:intergenic 45.0%
ACTGTGGCTGCAAGCAAAAA+CGG + chr8.3:31973083-31973102 None:intergenic 45.0%
AGAACCCTTGTGCAAGAAAC+TGG + chr8.3:31971579-31971598 None:intergenic 45.0%
AGAATGGACACGGTTAAGGA+TGG + chr8.3:31975212-31975231 None:intergenic 45.0%
AGAGGCAAGACAACCAAAGA+AGG + chr8.3:31972221-31972240 None:intergenic 45.0%
AGTGGTTGTAGTAACTGGTC+TGG - chr8.3:31975434-31975453 MS.gene056510:intron 45.0%
ATTGATAGATGCCGAGCCTA+TGG - chr8.3:31972938-31972957 MS.gene056510:intron 45.0%
CAACGGTGATTCACTCAAGA+TGG + chr8.3:31972383-31972402 None:intergenic 45.0%
CTAGCAACACTTTGTGTTGC+TGG - chr8.3:31972876-31972895 MS.gene056510:intron 45.0%
GAGGAATAGCAACTGCTTCT+AGG - chr8.3:31975517-31975536 MS.gene056510:intron 45.0%
GCACTTGTCCCTAGTAATGT+TGG + chr8.3:31973047-31973066 None:intergenic 45.0%
GCATAAGCAATGGCACAGAA+TGG + chr8.3:31976169-31976188 None:intergenic 45.0%
GGCAAGTTACCTAAGGAAAC+CGG - chr8.3:31973793-31973812 MS.gene056510:intron 45.0%
GTTGTAGTCCTCGAAATGGT+AGG - chr8.3:31972399-31972418 MS.gene056510:CDS 45.0%
TCGACGTAGTAGTGTGTGTT+TGG + chr8.3:31971913-31971932 None:intergenic 45.0%
TTAGGGCTTGATCCTGTTCT+AGG - chr8.3:31973607-31973626 MS.gene056510:intron 45.0%
TTGATAGATGCCGAGCCTAT+GGG - chr8.3:31972939-31972958 MS.gene056510:intron 45.0%
TTTAGTGATCCGATTGCTCG+AGG - chr8.3:31975498-31975517 MS.gene056510:intron 45.0%
! ATCTGGAGTGTGACTTAAGC+GGG - chr8.3:31975809-31975828 MS.gene056510:CDS 45.0%
! CATCTGGAGTGTGACTTAAG+CGG - chr8.3:31975808-31975827 MS.gene056510:CDS 45.0%
! CTCAAGTAGAAGTGTGGACA+TGG - chr8.3:31972979-31972998 MS.gene056510:intron 45.0%
! GTTGCTATTCCTCGAGCAAT+CGG + chr8.3:31975510-31975529 None:intergenic 45.0%
! GTTGTAGTAACTGGTCTGGT+TGG - chr8.3:31975438-31975457 MS.gene056510:intron 45.0%
! TAGAAGTGTGGACATGGACT+GGG - chr8.3:31972985-31973004 MS.gene056510:intron 45.0%
! TAGGCTACATGGTTGGTTCT+GGG - chr8.3:31973105-31973124 MS.gene056510:intron 45.0%
! TGGAGCCGGTGACATTTTAA+TGG - chr8.3:31974398-31974417 MS.gene056510:intron 45.0%
! TGTAGTAACTGGTCTGGTTG+GGG - chr8.3:31975440-31975459 MS.gene056510:intron 45.0%
! TTAGGCTACATGGTTGGTTC+TGG - chr8.3:31973104-31973123 MS.gene056510:intron 45.0%
!! ATTAAAATGTCACCGGCTCC+AGG + chr8.3:31974399-31974418 None:intergenic 45.0%
!! ATTTTGATGCCAGAAGCAGC+AGG + chr8.3:31972260-31972279 None:intergenic 45.0%
!! GGAGCCGGTGACATTTTAAT+GGG - chr8.3:31974399-31974418 MS.gene056510:intron 45.0%
!! TCTGGGGCTTTTTCTTGCTA+CGG - chr8.3:31972007-31972026 MS.gene056510:intron 45.0%
AACAAGACGTCCAACAAGGG+CGG + chr8.3:31975180-31975199 None:intergenic 50.0%
AACAGCAGCATTGTCTGCCA+AGG - chr8.3:31976129-31976148 MS.gene056510:intron 50.0%
ACACTCCAGATGTCTAGTCC+TGG + chr8.3:31975800-31975819 None:intergenic 50.0%
AGCCACAGTGTTAGGCTACA+TGG - chr8.3:31973094-31973113 MS.gene056510:intron 50.0%
AGGCATAGTGGTCGAGAAAG+AGG + chr8.3:31974271-31974290 None:intergenic 50.0%
AGTCCTCGAAATGGTAGGGT+AGG - chr8.3:31972404-31972423 MS.gene056510:intron 50.0%
AGTGCGGGATGCAGAGATAA+AGG + chr8.3:31975584-31975603 None:intergenic 50.0%
ATCACTGCTGTAGCTGCAGA+TGG + chr8.3:31972140-31972159 None:intergenic 50.0%
CACCGTTGTAGTCCTCGAAA+TGG - chr8.3:31972395-31972414 MS.gene056510:CDS 50.0%
GATTATGCACTCTGGTGGAG+AGG - chr8.3:31975617-31975636 MS.gene056510:CDS 50.0%
GCAGCAGTGGTTGTAGTAAC+TGG - chr8.3:31975429-31975448 MS.gene056510:intron 50.0%
GCATCCCTCACCTTACAACT+TGG + chr8.3:31975918-31975937 None:intergenic 50.0%
GGGTAGAATGGACACGGTTA+AGG + chr8.3:31975216-31975235 None:intergenic 50.0%
GTCCTCGAAATGGTAGGGTA+GGG - chr8.3:31972405-31972424 MS.gene056510:intron 50.0%
TATCCGTGTCAGTGTCTGTC+CGG + chr8.3:31972522-31972541 None:intergenic 50.0%
TCGAAATGGTAGGGTAGGGA+GGG - chr8.3:31972409-31972428 MS.gene056510:intron 50.0%
TCTTTCTCGACCACTATGCC+TGG - chr8.3:31974270-31974289 MS.gene056510:CDS 50.0%
TGCTGCTGTGAGAGATGGAT+TGG + chr8.3:31975415-31975434 None:intergenic 50.0%
TGGCTGCAAGCAAAAACGGA+AGG + chr8.3:31973079-31973098 None:intergenic 50.0%
TTGCTTGCAGCCACAGTGTT+AGG - chr8.3:31973086-31973105 MS.gene056510:intron 50.0%
TTGTACAGTGCTCATGGGCT+TGG - chr8.3:31976106-31976125 MS.gene056510:intron 50.0%
! AAAGGTGACGGCTTTCCCAT+AGG + chr8.3:31972957-31972976 None:intergenic 50.0%
! GATTGGCGGATGTGTTGGTA+AGG + chr8.3:31974377-31974396 None:intergenic 50.0%
! GGTTGGGGCAAATTTTGTGC+AGG - chr8.3:31975455-31975474 MS.gene056510:intron 50.0%
! GTAGAAGTGTGGACATGGAC+TGG - chr8.3:31972984-31973003 MS.gene056510:intron 50.0%
!! AGGTTGGTGCATGCATTGCT+TGG - chr8.3:31972292-31972311 MS.gene056510:CDS 50.0%
ACACCGGACAGACACTGACA+CGG - chr8.3:31972516-31972535 MS.gene056510:intron 55.0%
ACCAACACATCCGCCAATCC+TGG - chr8.3:31974378-31974397 MS.gene056510:intron 55.0%
ACCACTGCTGCTGTGAGAGA+TGG + chr8.3:31975420-31975439 None:intergenic 55.0%
ATTGTCTGCCAAGGAACCCG+AGG - chr8.3:31976138-31976157 MS.gene056510:intron 55.0%
CACGTCCAGGACTAGACATC+TGG - chr8.3:31975792-31975811 MS.gene056510:CDS 55.0%
CGAAATGGTAGGGTAGGGAG+GGG - chr8.3:31972410-31972429 MS.gene056510:intron 55.0%
CTCCCTACCCTACCATTTCG+AGG + chr8.3:31972410-31972429 None:intergenic 55.0%
CTCGAAATGGTAGGGTAGGG+AGG - chr8.3:31972408-31972427 MS.gene056510:intron 55.0%
CTGTACTCAACCGCCCTTGT+TGG - chr8.3:31975167-31975186 MS.gene056510:intron 55.0%
TAGCACACTCTCTCACGTCC+AGG - chr8.3:31975779-31975798 MS.gene056510:CDS 55.0%
TAGGGAGGGGTCGAGCAATT+TGG - chr8.3:31972423-31972442 MS.gene056510:intron 55.0%
TCCATCTCTCACAGCAGCAG+TGG - chr8.3:31975416-31975435 MS.gene056510:intron 55.0%
TGACGGCTTTCCCATAGGCT+CGG + chr8.3:31972952-31972971 None:intergenic 55.0%
TGACTTAAGCGGGCCTGGTA+GGG - chr8.3:31975819-31975838 MS.gene056510:CDS 55.0%
! GAAGGTGTGCACGACACGTT+CGG + chr8.3:31972619-31972638 None:intergenic 55.0%
! TCCAGGATTGGCGGATGTGT+TGG + chr8.3:31974382-31974401 None:intergenic 55.0%
!! AATGTCACCGGCTCCAGGAT+TGG + chr8.3:31974394-31974413 None:intergenic 55.0%
ACATCCGCCAATCCTGGAGC+CGG - chr8.3:31974384-31974403 MS.gene056510:intron 60.0%
GACTTAAGCGGGCCTGGTAG+GGG - chr8.3:31975820-31975839 MS.gene056510:CDS 60.0%
GAGTGTGACTTAAGCGGGCC+TGG - chr8.3:31975814-31975833 MS.gene056510:CDS 60.0%
GCACAGAATGGGAGAGCCTC+GGG + chr8.3:31976157-31976176 None:intergenic 60.0%
GGCACAGAATGGGAGAGCCT+CGG + chr8.3:31976158-31976177 None:intergenic 60.0%
GGGATGAACGGTTGCAGTCC+AGG + chr8.3:31975300-31975319 None:intergenic 60.0%
GTGACTTAAGCGGGCCTGGT+AGG - chr8.3:31975818-31975837 MS.gene056510:CDS 60.0%
TGCACTCTGGTGGAGAGGTG+TGG - chr8.3:31975622-31975641 MS.gene056510:CDS 60.0%
TCACTAGGCCAGCCCCTACC+AGG + chr8.3:31975835-31975854 None:intergenic 65.0%
TGGGAGAGCCTCGGGTTCCT+TGG + chr8.3:31976149-31976168 None:intergenic 65.0%
!! GTCACCGGCTCCAGGATTGG+CGG + chr8.3:31974391-31974410 None:intergenic 65.0%
TAAGCGGGCCTGGTAGGGGC+TGG - chr8.3:31975824-31975843 MS.gene056510:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 31971566 31976264 31971566 ID=MS.gene056510
chr8.3 mRNA 31971566 31976264 31971566 ID=MS.gene056510.t1;Parent=MS.gene056510
chr8.3 exon 31976151 31976264 31976151 ID=MS.gene056510.t1.exon1;Parent=MS.gene056510.t1
chr8.3 CDS 31976151 31976264 31976151 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31975537 31975852 31975537 ID=MS.gene056510.t1.exon2;Parent=MS.gene056510.t1
chr8.3 CDS 31975537 31975852 31975537 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31974704 31974965 31974704 ID=MS.gene056510.t1.exon3;Parent=MS.gene056510.t1
chr8.3 CDS 31974704 31974965 31974704 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31974202 31974317 31974202 ID=MS.gene056510.t1.exon4;Parent=MS.gene056510.t1
chr8.3 CDS 31974202 31974317 31974202 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31973354 31973463 31973354 ID=MS.gene056510.t1.exon5;Parent=MS.gene056510.t1
chr8.3 CDS 31973354 31973463 31973354 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31972546 31972723 31972546 ID=MS.gene056510.t1.exon6;Parent=MS.gene056510.t1
chr8.3 CDS 31972546 31972723 31972546 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31972292 31972421 31972292 ID=MS.gene056510.t1.exon7;Parent=MS.gene056510.t1
chr8.3 CDS 31972292 31972421 31972292 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
chr8.3 exon 31971566 31971716 31971566 ID=MS.gene056510.t1.exon8;Parent=MS.gene056510.t1
chr8.3 CDS 31971566 31971716 31971566 ID=cds.MS.gene056510.t1;Parent=MS.gene056510.t1
Gene Sequence

>MS.gene056510

ATGCTCAATTCCAGTTTCTTGCACAAGGGTTCTCAAGAAAATTCAAAAACCAGACAGCTTTTACCTAAATCAGCTGCAACTGATTCTGGGAACACTTCTTCACTCACCCATAATGTGAGTCTATTTGTTTCTATTCATTTTGGGAGAGCCAAAAGTGATTATGAAGACTTAAAATTATTGATCAGATAGGATTAATAGCTTTTATGGTTCAAATTTATTATTCAATTCAGTTTCATGTGAATCTATCCAAACATAGATTATTTCACCCTAAACTCATTTTAACTAAACTGAATTTTTTACAAGTTTAATTCAATCAAAATCAATTTTCACCACTTAGAACCAAACCAAACACACACTACTACGTCGAATTTGTGATAAATTTGAGTTTTTATTTTTTGCTTCTAAATTTCAGGTGTTTGGGGTGTTACATTTGATTGTGTCTCTGGGGCTTTTTCTTGCTACGGATAAGCTTTTGAAGAAAGCATTTGTAGCAGCTGCTATCAAATTTCCTAGTGCATTGTTTGGGATGTTTTGTATATTCTCAGTTTTGATAATTCTTGATTCTACTGTGCCATCTGCAGCTACAGCAGTGATGAACTTCTTTGAGCCTGCGTTTATGTTCATTCAGAGATGGCTCCCTTTGTTCTATGTTCCTTCTTTGGTTGTCTTGCCTCTTTCTGTTAAAGATATTCCTGCTGCTTCTGGCATCAAAATTTGTCTTATTGTAGGTTGGTGCATGCATTGCTTGGTTATTTATTTGCTATTTATTTATTGTTGGATTGGCTAAGTTGTTCTGAGTTTGCATTGTGAGTGACCATCTTGAGTGAATCACCGTTGTAGTCCTCGAAATGGTAGGGTAGGGAGGGGTCGAGCAATTTGGTCTCTGAAACTAACGAAATTCCAAAATGATCCCTGATATTGAGAACTAAGAAGCACTGACACATACATAAACACCGGACAGACACTGACACGGATACACCCTTAGTAATTGGAGAAAACGGAAGTGGTTGAATGTAACCACACATGTCAGTGTCATACAAGTGTTGGATACCGAACGTGTCGTGCACACCTTCAACCTGAAGTGTCAGTATCACATAGATTGATTCAGATTTAAATTTGGGTATGCTGATCAATGGCTTATAGATGCTTAAATAATTAGGTAGCCTCAGTGTTTTATTGACTTGAGTGACAAATCTTCTCTTCTCCAAGTTTTCTTTTCAAAATCTGCATCTCCTGTATGATGTGCATATTTTGATGCATGTTTGATGTTTGGGTACTGATCTTAATAATGTTGTTCAGTTGGAGGATGGCTAGCAACACTTTGTGTTGCTGGTTACACAGCTATAGCAGTACGAAAAGCTGTGAAAACAGAATTGATAGATGCCGAGCCTATGGGAAAGCCGTCACCTTTTTCTCAAGTAGAAGTGTGGACATGGACTGGGATTCTCCTAACATCATTTGTTAGTGCATTATATTATCCAACATTACTAGGGACAAGTGCTAGAACATGCCTTCCGTTTTTGCTTGCAGCCACAGTGTTAGGCTACATGGTTGGTTCTGGGTAAAATATATTCGTTTTTACTACTGATATTCAAATTGACAATTGCTTTTTCCCTATTCACACAAGGTTTAAAATTGAAAAACAAGTATTCCTTTATGAGTTTAGCTTTTATATAATGCCAGTGTAAAACGTTTTACACTGTCAACAAATCAAAATCAATCATATGTGTGATTTTAGAAGTAGTTATGATTGAAGTCAAACATTTTTAATGTTATGACAAGTATGATTGATTGACAGTGTAAAAAATCTTTAAACTGACAGTGTATATGAATTAAGTCGTTCTTTATCACATGCTGATGCTATTGGAATTTTATTACCAACTGTTATGGTATGTAATTCAATTTTTTATTTGAGGTTGATTCATTGTTGCTGTTATTTTCTTTCAGGTTGCCATCAAATGTGAAGAAGGTCTTCCATCCTATAATTTGCTGTGCACTATCCGCAGTTTTGACAGCATTTGCTTTCGGGTATTTTTCAAAGTTAGGGCTTGATCCTGTTCTAGGTATGTTTGAAGATAACTATATAATTACTCGTTCATGAAAGTTGGTGCCAACTTTGGTTGATAATTAACTAGGAAAAGAAACTCAAGTTCATAAACAACAAGTTTGAAACTTCCTTCTGATTGCAAACACCGAATGACAAACAGTCAAGCATTTCAAATCTTCTGGCAAGTTACCTAAGGAAACCGGTTTTTCTTTGTCCCCAATGTCTTGAAATATGCAACTCGTTGATTTATTTTAGTCCCTATAATGTATATTTTTTGTTTTAGTTTGTGTAATATTTGATTTATGTTCAATTAGTCCACGTACAATATAGGGACTAAAAAAAAATAGTACCGACACTAATGAGAAATAAATATATTGTAGAGACTAAAACAAAAAAGGCATTGAGGAGAAAAAAGATACTTTTTAAACTTCAGGGACCAAAATCAAGCACTTTCTTAAGCTGAGGGATTAAAACATAATTAGCCCTATTGTAAAGTTGTGTCAGTAAAGAGTTTTTCATTTTATGGTGCTGTATTGTGATGGTATTTCAGAAAGCATCTCACCATAAATCAAGTGAGAAATCCTCTCATTACTGATAAATATATGGAACAAATTTCAAGTCATTTTTTCTTTAGCTTTGCTTTCACATCACGGTTCCTCTTTCTCGACCACTATGCCTGGTAAATTTTATAGTCAAAGCCATTTCGGCATGATATATCTTTAGTTTTTGTTGACTCTTCTCTCAACATTCATAGGATATTACCTTACCAACACATCCGCCAATCCTGGAGCCGGTGACATTTTAATGGGATTTTTGGGATCTGTTATTCTCTCCTTTTCCTTCTCCATGTTCAAGCAAAGAAAGGTAAACCATCTATAGGTTTCCTCATGAAATAAATCTTATACTTCTGCTAAAAAACTAAAGCAGACAAATACAACAATGTCTCGTTTGGTTTTACTGCATATTTTTTATTTACTTATTCTTTTTGTTCTTGGTAAATCATTGGGCTATTTAGAGTTTGATTTAAGTTGAAGGGCCCTTTTTGGATAAACAACTCAATTAGGCACTTATATTATAGCATAAACACTTATTATTTACGTGCTTATGTATAAACTATTTTATAACAAAAGGCAAAATAAAGTCAAACTGTTTCCATATAAGCTATAAGTTGTTTTCATAAGCTATCATGTAGAACTTACGGAAATAAGCTAAAAGCAGTTTATGAACAGTTGATAAGATGTTTCCATAAGCTTTCAATAACAGTCTTACAAATGCTTATGCCAGTAAATAAATTCAAAAATGTCAATCCAAATAGGATATGAATTCAAACTTGAAGAGCATGGAATAGTGTACATATCCTTGTACAGACTTAATTCTCTTTCCAATCACTAACCAAATAAAAAAATTGTTTTCCAACATTTTTCTTTCTCATACCGTAGTTAAACAGCGGCTAAACCGTTACTCATTAACCATTGATTTGTTTTCTATATTCAGCTTGTGAAAAGGCATGCAGCTGAGATTTTCACTTCTGTCATCATCTCAACAGTATTCTCACTGTACTCAACCGCCCTTGTTGGACGTCTTGTTCAATTAGAACCATCCTTAACCGTGTCCATTCTACCCAGATGTATAACAGTGGCATTGGCCCTCAGTATTGTGTCTCTGTTTGATGGTAAGTATCATGCCTGGACTGCAACCGTTCATCCCAATAATCATTAAATGGATGCTCTAAATTTTGATTTGTATTTGATTGTACTTTAGTTCCATCATTGAAAATTTCTATTTTCTGTGTACAGGTGCCAATCCATCTCTCACAGCAGCAGTGGTTGTAGTAACTGGTCTGGTTGGGGCAAATTTTGTGCAGGCAACTCTTGATAAACTCAGATTTAGTGATCCGATTGCTCGAGGAATAGCAACTGCTTCTAGGTATTTTTTCAGTAACCAATATTTTGTTCGCTTACCAAAAAGCCTTTATCTCTGCATCCCGCACTAAAATTGAATTTGGATTATGCACTCTGGTGGAGAGGTGTGGAGTCTTACAATTCCCATACCACCGTTTTTATTTAGTCTATACATAGTTTGTCAGATAGTCTTAAAATTTAGGTTAGGTCTAATTCAACCATACAAAACCGGCTTGTAAGATGAGAGATGTCAATGTAAGACTCTTAGCACACTCTCTCACGTCCAGGACTAGACATCTGGAGTGTGACTTAAGCGGGCCTGGTAGGGGCTGGCCTAGTGAATTTTAGCAGATAATGATACCATCTTAAAATTTGGGTTGAGCTAACTCAACCTTACAAAACCAAGTTGTAAGGTGAGGGATGCTTCCCACTTATAAACTCATTTTCAAATCATATCTCATCCATCGTGAAACTCGTAATATAACTAGAAATGGTATTGATAAGAAGAATTTGTATTGATTCGGGTAGCATACAAGTATAGAAAACTATTTTCTTCTTCATGCATATGTGATTGTTTGCTCTTGAACAAATTTTGTACAGTGCTCATGGGCTTGGAACAGCAGCATTGTCTGCCAAGGAACCCGAGGCTCTCCCATTCTGTGCCATTGCTTATGCTTTGAATGGCATATTTGGATCTATACTATGTTCAATTCCAATTGTGAGACAAAGCTTGCTTGCAGTTATTGGCTGA

Protein sequence

>MS.gene056510.t1

MLNSSFLHKGSQENSKTRQLLPKSAATDSGNTSSLTHNVFGVLHLIVSLGLFLATDKLLKKAFVAAAIKFPSALFGMFCIFSVLIILDSTVPSAATAVMNFFEPAFMFIQRWLPLFYVPSLVVLPLSVKDIPAASGIKICLIVVGGWLATLCVAGYTAIAVRKAVKTELIDAEPMGKPSPFSQVEVWTWTGILLTSFVSALYYPTLLGTSARTCLPFLLAATVLGYMVGSGLPSNVKKVFHPIICCALSAVLTAFAFGYFSKLGLDPVLGYYLTNTSANPGAGDILMGFLGSVILSFSFSMFKQRKLVKRHAAEIFTSVIISTVFSLYSTALVGRLVQLEPSLTVSILPRCITVALALSIVSLFDGANPSLTAAVVVVTGLVGANFVQATLDKLRFSDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALNGIFGSILCSIPIVRQSLLAVIG