AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96243

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96243.t1 MTR_2g019260 97.928 531 11 0 30 560 233 763 0.0 1073
MS.gene96243.t1 MTR_2g019260 99.044 523 5 0 30 552 233 755 0.0 1070
MS.gene96243.t1 MTR_8g056030 42.991 535 289 9 30 552 162 692 3.56e-137 416
MS.gene96243.t1 MTR_6g011700 42.777 533 263 12 33 552 163 666 1.47e-133 405
MS.gene96243.t1 MTR_5g039880 43.233 532 286 9 33 552 166 693 1.06e-131 402
MS.gene96243.t1 MTR_6g011770 41.839 533 270 10 32 552 162 666 1.16e-126 388
MS.gene96243.t1 MTR_7g039660 41.887 530 287 11 32 552 164 681 6.78e-121 373
MS.gene96243.t1 MTR_7g039690 41.055 531 275 9 33 552 166 669 4.48e-119 368
MS.gene96243.t1 MTR_1g040995 39.382 518 293 9 4 502 352 867 7.01e-106 338
MS.gene96243.t1 MTR_1g040995 33.184 223 124 7 36 241 175 389 5.16e-24 107
MS.gene96243.t1 MTR_1g040925 37.610 569 317 11 4 552 352 902 3.06e-104 335
MS.gene96243.t1 MTR_1g040925 33.184 223 124 7 36 241 175 389 6.90e-24 107
MS.gene96243.t1 MTR_2g437390 33.743 569 344 8 17 557 145 708 2.55e-101 323
MS.gene96243.t1 MTR_7g108340 32.874 581 355 9 5 557 128 701 3.31e-101 322
MS.gene96243.t1 MTR_4g119413 33.919 569 343 8 17 557 147 710 8.27e-101 322
MS.gene96243.t1 MTR_5g039770 34.815 540 314 14 30 557 107 620 8.83e-85 277
MS.gene96243.t1 MTR_7g039790 34.323 539 317 13 30 557 171 683 3.61e-84 277
MS.gene96243.t1 MTR_7g445240 33.647 532 304 14 35 557 176 667 2.12e-76 256
MS.gene96243.t1 MTR_4g119413 33.107 441 266 7 17 429 147 586 2.26e-71 241
MS.gene96243.t1 MTR_5g040040 39.355 310 157 8 225 528 253 537 1.78e-52 189
MS.gene96243.t1 MTR_5g039890 33.224 304 148 7 30 279 160 462 6.01e-40 152
MS.gene96243.t1 MTR_1g040965 42.604 169 94 3 387 552 11 179 2.25e-34 130
MS.gene96243.t1 MTR_7g039440 35.023 217 131 5 32 239 90 305 4.48e-29 117
MS.gene96243.t1 MTR_5g040180 35.681 213 127 5 36 239 158 369 1.06e-28 118
MS.gene96243.t1 MTR_5g040190 39.053 169 96 4 32 194 154 321 5.94e-27 112
MS.gene96243.t1 MTR_7g039430 38.462 169 97 4 32 194 154 321 1.67e-25 108
MS.gene96243.t1 MTR_7g039680 32.020 203 115 4 30 224 160 347 1.05e-21 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96243.t1 AT5G46210 87.572 523 65 0 30 552 233 755 0.0 934
MS.gene96243.t1 AT1G26830 43.925 535 284 9 30 552 163 693 1.20e-144 435
MS.gene96243.t1 AT1G69670 42.243 535 293 9 30 552 163 693 2.98e-139 421
MS.gene96243.t1 AT1G69670 42.243 535 293 9 30 552 163 693 2.98e-139 421
MS.gene96243.t1 AT4G02570 34.276 566 342 8 17 557 144 704 2.05e-104 331
MS.gene96243.t1 AT4G02570 34.276 566 342 8 17 557 144 704 2.05e-104 331
MS.gene96243.t1 AT4G02570 34.276 566 342 8 17 557 144 704 2.05e-104 331
MS.gene96243.t1 AT4G02570 34.276 566 342 8 17 557 144 704 2.05e-104 331
MS.gene96243.t1 AT1G02980 31.295 556 350 7 30 557 157 708 4.70e-88 288
MS.gene96243.t1 AT1G02980 31.295 556 350 7 30 557 157 708 4.70e-88 288
MS.gene96243.t1 AT1G43140 31.284 553 325 9 30 557 165 687 2.25e-79 265
MS.gene96243.t1 AT4G12100 33.668 199 119 4 30 224 221 410 9.41e-27 113
MS.gene96243.t1 AT1G59790 25.926 216 150 4 20 226 152 366 1.22e-13 73.2
MS.gene96243.t1 AT2G04660 26.000 200 142 2 262 456 537 735 6.29e-12 69.3
MS.gene96243.t1 AT1G59790 25.366 205 143 4 20 215 152 355 3.65e-11 65.5

Find 120 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATCCCTTCTTGAATTTA+AGG 0.088937 2.2:+65379003 MS.gene96243:CDS
GTTGGCTGTCTCCCTATTTC+AGG 0.192113 2.2:+65382550 MS.gene96243:CDS
TTGAAAGGCAAACCTGAAAT+AGG 0.216829 2.2:-65382562 None:intergenic
TAAACTTCGTGCGGGTAATA+AGG 0.224990 2.2:+65380548 MS.gene96243:CDS
ATAGGGTTTCTCTATGCTTA+TGG 0.229023 2.2:+65378832 MS.gene96243:intron
GATAATTTAGTGAACATTAT+TGG 0.229645 2.2:+65377673 MS.gene96243:CDS
ATGCTCAAATGCGTCTTTAA+TGG 0.244930 2.2:-65379083 None:intergenic
GGCACCAGTCTTCCTGTTAT+TGG 0.258736 2.2:+65377727 MS.gene96243:CDS
TTTCCAAGATCGTCAATATC+AGG 0.294842 2.2:+65383239 MS.gene96243:CDS
CAAGCTGGAAGGAATGTTTA+AGG 0.300663 2.2:+65381013 MS.gene96243:CDS
GTTAAAGATGTTTACTGCTC+TGG 0.301775 2.2:+65378014 MS.gene96243:CDS
CGCCCCTCTTTACCGTATAA+AGG 0.325505 2.2:+65382979 MS.gene96243:CDS
GCTTGAATGGTCTAAATCTA+AGG 0.329340 2.2:+65377695 MS.gene96243:CDS
ATGGGTATTGTACCTTTATA+CGG 0.337851 2.2:-65382991 None:intergenic
CTTTGGGAAAATCTGCCTTT+AGG 0.342861 2.2:-65382517 None:intergenic
AGCCTTCACCTTGGAGATCA+TGG 0.344264 2.2:-65380874 None:intergenic
GTGAACATTATTGGCTTGAA+TGG 0.351247 2.2:+65377682 MS.gene96243:CDS
CTCATGTGGCAAAATTCTTT+AGG 0.360455 2.2:+65382485 MS.gene96243:CDS
TCTCCTGATGTATGAACTAA+TGG 0.362057 2.2:-65378933 None:intergenic
CTTCCAGCTTGTTTGTGAAC+TGG 0.365773 2.2:-65381001 None:intergenic
AGTGTTCATGTCTTGACAAC+AGG 0.383366 2.2:+65382170 MS.gene96243:CDS
CTTGCTAAAAGACTACTCTT+AGG 0.384308 2.2:+65380822 MS.gene96243:CDS
TGAAAGGCAAACCTGAAATA+GGG 0.385978 2.2:-65382561 None:intergenic
TATACCTGCCATTCTTGATA+AGG 0.387173 2.2:+65378723 MS.gene96243:CDS
TCCACATGCTTCAAGTAATC+TGG 0.392688 2.2:-65378132 None:intergenic
TAACCTGATATTGACGATCT+TGG 0.398987 2.2:-65383242 None:intergenic
AACTGGACAGGGCATTGTTA+TGG 0.399445 2.2:+65378955 MS.gene96243:CDS
TACTTCAGAAGAGGAATTAG+AGG 0.402971 2.2:+65380572 MS.gene96243:CDS
AGAGCAAGTGCATTCTTTGA+AGG 0.402989 2.2:-65378874 None:intergenic
AAACTTCGTGCGGGTAATAA+GGG 0.411117 2.2:+65380549 MS.gene96243:CDS
TGCACCTGTTCACTGTTGTC+TGG 0.428300 2.2:+65384382 MS.gene96243:CDS
ACTAAGCTTTCAAGATATCA+AGG 0.436910 2.2:+65382713 MS.gene96243:CDS
AAAAGTTCGTGTTCTACAAA+AGG 0.437752 2.2:+65382794 MS.gene96243:CDS
GATAGACTCATTCCAATAAC+AGG 0.439161 2.2:-65377739 None:intergenic
TTAAAGATGTTTACTGCTCT+GGG 0.447364 2.2:+65378015 MS.gene96243:CDS
CAAGATATCAAGGATTCTAC+TGG 0.452433 2.2:+65382723 MS.gene96243:CDS
AGTTCATACATCAGGAGAAC+TGG 0.453158 2.2:+65378938 MS.gene96243:CDS
AAGAAAGCATAACGGCTAGA+AGG 0.455971 2.2:-65384405 None:intergenic
TCTTCCACATCTCTACCCTT+TGG 0.458927 2.2:-65382923 None:intergenic
TCATGAATTGAATGTTTACC+AGG 0.462056 2.2:+65382314 MS.gene96243:CDS
TATTACTGAACTCTTCCAAC+AGG 0.462708 2.2:+65384151 MS.gene96243:CDS
TGAAAGATGTTTGATCTACT+TGG 0.468770 2.2:+65378642 MS.gene96243:CDS
AAAATTCAGATGTACATTCA+AGG 0.475948 2.2:-65378068 None:intergenic
TTTAGGTCACTGTGTCCTAA+AGG 0.476864 2.2:+65382502 MS.gene96243:CDS
GGTCTAAATCTAAGGATCCA+TGG 0.493196 2.2:+65377703 MS.gene96243:CDS
AGGCTGCTCTTGACACAACA+TGG 0.497636 2.2:+65379023 MS.gene96243:CDS
GTCTAAATCTAAGGATCCAT+GGG 0.501086 2.2:+65377704 MS.gene96243:CDS
GTACCTTTATACGGTAAAGA+GGG 0.508391 2.2:-65382982 None:intergenic
GGTGAATGCAATTCAGTTGA+AGG 0.508957 2.2:+65383179 MS.gene96243:intron
AAAGGGCAAGGATGTGTTTG+AGG 0.509726 2.2:+65380782 MS.gene96243:intron
AAGGCCAGACAACAGTGAAC+AGG 0.509762 2.2:-65384386 None:intergenic
AGGCCATTAGTTCATACATC+AGG 0.510040 2.2:+65378930 MS.gene96243:CDS
AACTTGGCAATCAACTCTGC+AGG 0.515108 2.2:-65380516 None:intergenic
CATGTATTTCACACCTTCAG+AGG 0.516247 2.2:-65378094 None:intergenic
TGTACCTTTATACGGTAAAG+AGG 0.518229 2.2:-65382983 None:intergenic
TGCCCTTGAGTCATTGAGGC+AGG 0.519952 2.2:+65378910 MS.gene96243:CDS
ATGAGGAAGTCTGACATCCA+TGG 0.522877 2.2:-65382295 None:intergenic
ATACATCAGGAGAACTGGAC+AGG 0.527967 2.2:+65378943 MS.gene96243:CDS
GCGAGAACAAAACTCCCATC+AGG 0.529523 2.2:+65382137 MS.gene96243:CDS
CACTCATTTCAATGCCTGAT+GGG 0.530176 2.2:-65382151 None:intergenic
TCAGATGTACATTCAAGGAA+TGG 0.531912 2.2:-65378063 None:intergenic
TTGTGAGGATAATGAAAACT+AGG 0.536734 2.2:+65384105 MS.gene96243:CDS
GAGCAAAACCTTATCAAGAA+TGG 0.537185 2.2:-65378731 None:intergenic
AAAACCTTATCAAGAATGGC+AGG 0.537415 2.2:-65378727 None:intergenic
GCATCTTATCAATCTCCGTC+AGG 0.543130 2.2:+65379102 MS.gene96243:CDS
ATCCTTCAGACAGTCATCCC+AGG 0.545646 2.2:+65382115 MS.gene96243:CDS
CATTCCAATAACAGGAAGAC+TGG 0.548793 2.2:-65377731 None:intergenic
CGCCTGGGATGACTGTCTGA+AGG 0.549291 2.2:-65382117 None:intergenic
GAGCAGCCTTAAATTCAAGA+AGG 0.550464 2.2:-65379009 None:intergenic
GGGCACACTTGATAAAGTCC+TGG 0.550472 2.2:+65380593 MS.gene96243:CDS
AGCAGCCTTAAATTCAAGAA+GGG 0.554319 2.2:-65379008 None:intergenic
GGTTTCTCTATGCTTATGGA+TGG 0.557005 2.2:+65378836 MS.gene96243:CDS
TGGCCTGCCTCAATGACTCA+AGG 0.558373 2.2:-65378913 None:intergenic
CAGTAAACATCTTTAACAGA+TGG 0.561133 2.2:-65378008 None:intergenic
ATCTGAGCAAATACAGTGGA+AGG 0.561281 2.2:+65382459 MS.gene96243:CDS
TTTGCAGACAAGATTGCAAG+AGG 0.563201 2.2:+65378615 MS.gene96243:intron
TTCCAGATTAGGTGAAGCAG+TGG 0.570830 2.2:+65377969 MS.gene96243:intron
ACAGGGCATTGTTATGGATG+AGG 0.579098 2.2:+65378961 MS.gene96243:CDS
ACATCCATGGGTGGATATGT+TGG 0.581084 2.2:-65382282 None:intergenic
ACACTCATTTCAATGCCTGA+TGG 0.581343 2.2:-65382152 None:intergenic
AACATGCAACAGATGCCAAA+GGG 0.584238 2.2:+65382908 MS.gene96243:intron
TTGGATGATAAACTTCGTGC+GGG 0.584415 2.2:+65380540 MS.gene96243:CDS
TAGCCAGTTCACAAACAAGC+TGG 0.586128 2.2:+65380998 MS.gene96243:CDS
TGAGGAAGTCTGACATCCAT+GGG 0.588123 2.2:-65382294 None:intergenic
TAATAAGGGTACTTCAGAAG+AGG 0.602012 2.2:+65380563 MS.gene96243:CDS
GGCCTGCCTCAATGACTCAA+GGG 0.604534 2.2:-65378912 None:intergenic
ATCTTGGAAAACTCTTTCTG+TGG 0.605393 2.2:-65383226 None:intergenic
TCCAGATTACTTGAAGCATG+TGG 0.612759 2.2:+65378131 MS.gene96243:CDS
CTGGCCAACATATCCACCCA+TGG 0.617052 2.2:+65382278 MS.gene96243:CDS
TCGAAGACAAGGAACTGAGA+AGG 0.619324 2.2:+65382748 MS.gene96243:CDS
GTGTTCATGTCTTGACAACA+GGG 0.623106 2.2:+65382171 MS.gene96243:CDS
TCAATGCCCTTGAGTCATTG+AGG 0.623443 2.2:+65378906 MS.gene96243:CDS
CAGTTCACAAACAAGCTGGA+AGG 0.623690 2.2:+65381002 MS.gene96243:CDS
GATGCCAAAGGGTAGAGATG+TGG 0.624974 2.2:+65382919 MS.gene96243:intron
TTTGGATGATAAACTTCGTG+CGG 0.625081 2.2:+65380539 MS.gene96243:CDS
ACAGTGGAAGGCGTCTCATG+TGG 0.625966 2.2:+65382471 MS.gene96243:CDS
TGGTAAACATTCAATTCATG+AGG 0.627301 2.2:-65382312 None:intergenic
GAACATGCAACAGATGCCAA+AGG 0.630147 2.2:+65382907 MS.gene96243:intron
TCAGTTGAAGGAGACAGTAG+AGG 0.631451 2.2:+65383191 MS.gene96243:CDS
TTCTACTGGTATCGAAGACA+AGG 0.634091 2.2:+65382737 MS.gene96243:CDS
TACCTTTATACGGTAAAGAG+GGG 0.638692 2.2:-65382981 None:intergenic
ACTCTGCAATCACTTGCATG+TGG 0.641153 2.2:+65382771 MS.gene96243:CDS
GAATGAACCTGAATAAAACC+AGG 0.646175 2.2:-65380611 None:intergenic
AGATTACTTGAAGCATGTGG+AGG 0.650956 2.2:+65378134 MS.gene96243:CDS
GGAGAAATCCATGATCTCCA+AGG 0.653599 2.2:+65380866 MS.gene96243:CDS
TGGCAATCAACTCTGCAGGT+CGG 0.662336 2.2:-65380512 None:intergenic
GTGCAAGCAAGAAAGCATAA+CGG 0.663399 2.2:-65384413 None:intergenic
GGCTGCTCTTGACACAACAT+GGG 0.668657 2.2:+65379024 MS.gene96243:CDS
ACTTCAGAAGAGGAATTAGA+GGG 0.675328 2.2:+65380573 MS.gene96243:CDS
TGAGGAGAAAGATAAAGACA+TGG 0.677344 2.2:+65378979 MS.gene96243:CDS
TTCTATCTGAGCAAATACAG+TGG 0.683202 2.2:+65382455 MS.gene96243:CDS
TACATCAGGAGAACTGGACA+GGG 0.684375 2.2:+65378944 MS.gene96243:CDS
AAAGAGTGCTTCAATTGACG+CGG 0.692090 2.2:+65380845 MS.gene96243:CDS
GAATGAGTCTATCCCAACAG+AGG 0.694666 2.2:+65377749 MS.gene96243:CDS
CTTTATACGGTAAAGAGGGG+CGG 0.695442 2.2:-65382978 None:intergenic
GGAAGTCTGACATCCATGGG+TGG 0.712438 2.2:-65382291 None:intergenic
TCTAAATCTAAGGATCCATG+GGG 0.728118 2.2:+65377705 MS.gene96243:CDS
AGGTCGATGCTGCTATTGTG+AGG 0.737367 2.2:+65384090 MS.gene96243:intron
ATGCAGTTGAAGACTGAGTG+TGG 0.742853 2.2:+65380975 MS.gene96243:intron
CTAAATCTAAGGATCCATGG+GGG 0.801527 2.2:+65377706 MS.gene96243:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTTTAATTAAAATGTT+GGG + chr2.2:65379383-65379402 MS.gene96243:intron 10.0%
!! AAATTAAAGTAATGAAAATT+TGG + chr2.2:65379687-65379706 MS.gene96243:intron 10.0%
!! AACTATAACAAAAATAATAA+TGG - chr2.2:65382591-65382610 None:intergenic 10.0%
!!! AAACAAAATTTAATTTAACT+GGG - chr2.2:65379517-65379536 None:intergenic 10.0%
!!! AAACAAATTTTAATTTAACA+GGG + chr2.2:65379798-65379817 MS.gene96243:intron 10.0%
!!! ATTATTAGATTTTTTTTTGA+AGG - chr2.2:65384027-65384046 None:intergenic 10.0%
!!! GTAATATATTTTTTTTTTTG+AGG + chr2.2:65383585-65383604 MS.gene96243:intron 10.0%
!!! TAAACAAAATTTAATTTAAC+TGG - chr2.2:65379518-65379537 None:intergenic 10.0%
!!! TAAACAAATTTTAATTTAAC+AGG + chr2.2:65379797-65379816 MS.gene96243:intron 10.0%
!!! TAACATTTTAAATAAATAGA+TGG + chr2.2:65380909-65380928 MS.gene96243:intron 10.0%
!! CAAATAATAAAATTAATGAG+TGG + chr2.2:65383436-65383455 MS.gene96243:intron 15.0%
!! CAAATCTTTAATTAAAATGT+TGG + chr2.2:65379382-65379401 MS.gene96243:intron 15.0%
!! TAAAAAAGGGATAATATTTA+AGG - chr2.2:65378532-65378551 None:intergenic 15.0%
!! TCAATTAGTTAAAATAGTTA+GGG + chr2.2:65378223-65378242 MS.gene96243:intron 15.0%
!! TTAATTAAAGATTTGAATGT+AGG - chr2.2:65379377-65379396 None:intergenic 15.0%
!! TTATTTGCATTTATATAAAG+AGG + chr2.2:65381284-65381303 MS.gene96243:intron 15.0%
!!! AGAAAATAAGTTGTTTTTAT+TGG - chr2.2:65380291-65380310 None:intergenic 15.0%
!!! ATATTTCTAAAATTTCTCTA+TGG - chr2.2:65379173-65379192 None:intergenic 15.0%
!!! GTTATCTTATTTTTTTTACA+TGG + chr2.2:65380484-65380503 MS.gene96243:intron 15.0%
!! AAAATATCCTGAAGAAATAA+AGG - chr2.2:65382428-65382447 None:intergenic 20.0%
!! AAACTAATATGAAAATCAAC+CGG - chr2.2:65377882-65377901 None:intergenic 20.0%
!! AATAATAAATATCACACCAT+CGG - chr2.2:65384277-65384296 None:intergenic 20.0%
!! AATTGCATTAAAGAAACTAA+AGG - chr2.2:65384191-65384210 None:intergenic 20.0%
!! ACGAAATTCACTATATTTAT+AGG - chr2.2:65379427-65379446 None:intergenic 20.0%
!! ATAAAATATAATCTCTAACC+AGG - chr2.2:65381169-65381188 None:intergenic 20.0%
!! ATAGTATTCATAAGACATTT+AGG - chr2.2:65379933-65379952 None:intergenic 20.0%
!! CGAAATTCACTATATTTATA+GGG - chr2.2:65379426-65379445 None:intergenic 20.0%
!! CTTTGTGAAATAAATCTAAT+CGG - chr2.2:65383411-65383430 None:intergenic 20.0%
!! GAAGGATTGAATATAAAAAA+GGG - chr2.2:65378545-65378564 None:intergenic 20.0%
!! GATAATTTAGTGAACATTAT+TGG + chr2.2:65377673-65377692 MS.gene96243:CDS 20.0%
!! GTCAATTAGTTAAAATAGTT+AGG + chr2.2:65378222-65378241 MS.gene96243:intron 20.0%
!! GTTAAAAGATCATTCATTTA+TGG - chr2.2:65382351-65382370 None:intergenic 20.0%
!! TAAATGTCTTATGAATACTA+TGG + chr2.2:65379932-65379951 MS.gene96243:intron 20.0%
!! TAGTATTCATAAGACATTTA+GGG - chr2.2:65379932-65379951 None:intergenic 20.0%
!! TATCAGATAAAATTCTCATA+TGG - chr2.2:65378503-65378522 None:intergenic 20.0%
!! TTAAGTTATGTACACAAAAT+TGG + chr2.2:65383823-65383842 MS.gene96243:intron 20.0%
!!! AAAAAAAAAGTGACATGTTT+TGG + chr2.2:65379458-65379477 MS.gene96243:intron 20.0%
!!! AAATAATAATGGCTTTTGAA+AGG - chr2.2:65382580-65382599 None:intergenic 20.0%
!!! ACATGCTGAAAAATTTTATA+GGG - chr2.2:65379485-65379504 None:intergenic 20.0%
!!! ACTTGACTTTTTTTTGTAAA+GGG + chr2.2:65380765-65380784 MS.gene96243:intron 20.0%
!!! ATAAAAAAATTGACACGTTT+TGG - chr2.2:65379857-65379876 None:intergenic 20.0%
!!! CAATTTTATTTCATGCTATA+GGG + chr2.2:65378815-65378834 MS.gene96243:intron 20.0%
!!! CCAAATTTTAGAAAATTTGA+TGG - chr2.2:65383644-65383663 None:intergenic 20.0%
!!! CCATCAAATTTTCTAAAATT+TGG + chr2.2:65383641-65383660 MS.gene96243:intron 20.0%
!!! CTTAATATATGAATTTTAGC+CGG + chr2.2:65377860-65377879 MS.gene96243:intron 20.0%
!!! GTTTAAAATCATTTTGATAC+AGG + chr2.2:65382064-65382083 MS.gene96243:intron 20.0%
!!! GTTTTTTGTTTTTGTTTTGA+AGG + chr2.2:65383791-65383810 MS.gene96243:intron 20.0%
!!! TACATGCTGAAAAATTTTAT+AGG - chr2.2:65379486-65379505 None:intergenic 20.0%
!!! TACTTGACTTTTTTTTGTAA+AGG + chr2.2:65380764-65380783 MS.gene96243:intron 20.0%
!!! TAGACATTTAAAACTCATTT+TGG - chr2.2:65383942-65383961 None:intergenic 20.0%
!!! TATAGCAACAACATTTTATA+TGG - chr2.2:65381260-65381279 None:intergenic 20.0%
!!! TATCATCCAATAATTTTTGT+AGG + chr2.2:65383913-65383932 MS.gene96243:intron 20.0%
!!! TCAATTTTATTTCATGCTAT+AGG + chr2.2:65378814-65378833 MS.gene96243:intron 20.0%
!!! TGGTTAGAGATTATATTTTA+TGG + chr2.2:65381168-65381187 MS.gene96243:intron 20.0%
!!! TGTTAGGTACATTTTTTTTA+AGG - chr2.2:65380073-65380092 None:intergenic 20.0%
!!! TTTAGGGTTAAATAAGTTTT+TGG - chr2.2:65379916-65379935 None:intergenic 20.0%
!!! TTTTCTGTTGTTGTTATTAA+TGG - chr2.2:65378685-65378704 None:intergenic 20.0%
!!! TTTTTATAGTTGTATGTGAA+AGG + chr2.2:65378318-65378337 MS.gene96243:intron 20.0%
! AAAATTCAGATGTACATTCA+AGG - chr2.2:65378071-65378090 None:intergenic 25.0%
! AAAGCAAATCACTTTCAAAA+GGG - chr2.2:65383676-65383695 None:intergenic 25.0%
! AAATGACAAATATGACAGAT+AGG - chr2.2:65380204-65380223 None:intergenic 25.0%
! AACTTAAAATATGTTGTTCG+TGG - chr2.2:65383774-65383793 None:intergenic 25.0%
! AAGGGTTATCATGTATAAAT+TGG + chr2.2:65378257-65378276 MS.gene96243:intron 25.0%
! AAGTTCATCCACAAAATATA+AGG - chr2.2:65379714-65379733 None:intergenic 25.0%
! AAGTTTATCATCCAAAAACT+TGG - chr2.2:65380535-65380554 None:intergenic 25.0%
! AATCAACATCAAGAAATTGA+AGG - chr2.2:65382878-65382897 None:intergenic 25.0%
! AATGACAAATATGACAGATA+GGG - chr2.2:65380203-65380222 None:intergenic 25.0%
! ACAACACTGTATATATACTT+AGG + chr2.2:65381645-65381664 MS.gene96243:intron 25.0%
! ACATAATAAAACACACATGA+AGG - chr2.2:65380441-65380460 None:intergenic 25.0%
! AGGATTAGAAATACTATTGT+TGG + chr2.2:65383512-65383531 MS.gene96243:intron 25.0%
! ATTGTCAAAATACAAGTGAA+AGG - chr2.2:65381458-65381477 None:intergenic 25.0%
! CAACACTGTATATATACTTA+GGG + chr2.2:65381646-65381665 MS.gene96243:intron 25.0%
! CAATGGACCAAAAATAATTT+GGG - chr2.2:65383704-65383723 None:intergenic 25.0%
! CACAATTGACTATATTTGTA+GGG + chr2.2:65379889-65379908 MS.gene96243:intron 25.0%
! GAAATAAAATTGAAGCAACA+AGG - chr2.2:65378807-65378826 None:intergenic 25.0%
! GGAAGGATTGAATATAAAAA+AGG - chr2.2:65378546-65378565 None:intergenic 25.0%
! GTATTATTCATTCATGTTTG+TGG + chr2.2:65380688-65380707 MS.gene96243:intron 25.0%
! TAATCTGGAAAATAAGACAA+AGG - chr2.2:65377959-65377978 None:intergenic 25.0%
! TACAGAAAACAAGATGTAAT+TGG - chr2.2:65380671-65380690 None:intergenic 25.0%
! TATAGATTAATCGATGAACT+CGG + chr2.2:65379293-65379312 MS.gene96243:intron 25.0%
! TCAATGGACCAAAAATAATT+TGG - chr2.2:65383705-65383724 None:intergenic 25.0%
! TCACAATTGACTATATTTGT+AGG + chr2.2:65379888-65379907 MS.gene96243:intron 25.0%
! TGAAATTAATACTGCATATC+TGG + chr2.2:65382644-65382663 MS.gene96243:intron 25.0%
! TGGATACCTACAAAAATTAT+TGG - chr2.2:65383922-65383941 None:intergenic 25.0%
!! AAAAGTATAGTTGTTATCAG+CGG - chr2.2:65379972-65379991 None:intergenic 25.0%
!! AATTTGGACCTTATATTTTG+TGG + chr2.2:65379703-65379722 MS.gene96243:intron 25.0%
!! AGATTATATTTTATGGCCTT+CGG + chr2.2:65381175-65381194 MS.gene96243:intron 25.0%
!! TGATATTGACTGTTTATAAC+AGG - chr2.2:65383898-65383917 None:intergenic 25.0%
!! TGTTGGGTTAAATAAGTTTT+TGG + chr2.2:65379399-65379418 MS.gene96243:intron 25.0%
!! TTCATCTCCCAAATTATTTT+TGG + chr2.2:65383694-65383713 MS.gene96243:intron 25.0%
!!! AACGTGTCAATTTTTTTATG+AGG + chr2.2:65379858-65379877 MS.gene96243:intron 25.0%
!!! ACGTGCTGAAATTTTTTATT+GGG + chr2.2:65379830-65379849 MS.gene96243:intron 25.0%
!!! CAAGGAAAATTTTAGAGAAA+AGG - chr2.2:65378789-65378808 None:intergenic 25.0%
!!! CTATTTTGATATGGAAGTAA+TGG - chr2.2:65384240-65384259 None:intergenic 25.0%
!!! GTTCTTTTTCAAACTCATTT+CGG + chr2.2:65383142-65383161 MS.gene96243:intron 25.0%
!!! TTACTCTAAAATTATGACTG+AGG + chr2.2:65383120-65383139 MS.gene96243:intron 25.0%
!!! TTTCACTTGTATTTTGACAA+TGG + chr2.2:65381457-65381476 MS.gene96243:intron 25.0%
!!! TTTGTCTTATTTTCCAGATT+AGG + chr2.2:65377958-65377977 MS.gene96243:intron 25.0%
!!! TTTTTAAGGATTGATGAGTT+GGG - chr2.2:65380059-65380078 None:intergenic 25.0%
!!! TTTTTTAAGGATTGATGAGT+TGG - chr2.2:65380060-65380079 None:intergenic 25.0%
AAAAATAAGAAATGCCTCCA+TGG - chr2.2:65378303-65378322 None:intergenic 30.0%
AAAAGTTCGTGTTCTACAAA+AGG + chr2.2:65382794-65382813 MS.gene96243:CDS 30.0%
AAAGAGGCGATAAACAATAT+TGG + chr2.2:65381300-65381319 MS.gene96243:intron 30.0%
AAGCAAATCACTTTCAAAAG+GGG - chr2.2:65383675-65383694 None:intergenic 30.0%
AAGTTCGTATATCATTTGCT+TGG + chr2.2:65381516-65381535 MS.gene96243:intron 30.0%
AATAATTCTTTGATGAGTGC+AGG + chr2.2:65382253-65382272 MS.gene96243:intron 30.0%
AATGAAAATCAGATACGAAG+GGG - chr2.2:65379269-65379288 None:intergenic 30.0%
AATTCCCAAAGAAAAAGACA+TGG - chr2.2:65381142-65381161 None:intergenic 30.0%
ACAATGAAAATCAGATACGA+AGG - chr2.2:65379271-65379290 None:intergenic 30.0%
ACAATGATTAGTGTTTGTAG+TGG + chr2.2:65383096-65383115 MS.gene96243:intron 30.0%
ACCCATTTCTTACTACTAAA+GGG + chr2.2:65383008-65383027 MS.gene96243:intron 30.0%
ACTAAGCTTTCAAGATATCA+AGG + chr2.2:65382713-65382732 MS.gene96243:CDS 30.0%
AGGACAATTATTAGAGTTTC+AGG + chr2.2:65381792-65381811 MS.gene96243:intron 30.0%
AGTTCGTATATCATTTGCTT+GGG + chr2.2:65381517-65381536 MS.gene96243:intron 30.0%
ATCCTGAAGAAATAAAGGAA+AGG - chr2.2:65382423-65382442 None:intergenic 30.0%
ATGCTGTAGATAGATACTAA+AGG + chr2.2:65381758-65381777 MS.gene96243:intron 30.0%
ATTCCCAAAGAAAAAGACAT+GGG - chr2.2:65381141-65381160 None:intergenic 30.0%
ATTGGCATCAGTAATGTAAA+CGG + chr2.2:65382222-65382241 MS.gene96243:intron 30.0%
CAATAAAAAATTTCAGCACG+TGG - chr2.2:65379831-65379850 None:intergenic 30.0%
CAATGAAAATCAGATACGAA+GGG - chr2.2:65379270-65379289 None:intergenic 30.0%
CAATGATTAGTGTTTGTAGT+GGG + chr2.2:65383097-65383116 MS.gene96243:intron 30.0%
CACATTGTATACTTACTGTA+GGG + chr2.2:65378573-65378592 MS.gene96243:intron 30.0%
CAGTAAACATCTTTAACAGA+TGG - chr2.2:65378011-65378030 None:intergenic 30.0%
CAGTTAAGAAGATAACTGTT+AGG - chr2.2:65378441-65378460 None:intergenic 30.0%
CATGTATAAATTGGCGAAAT+AGG + chr2.2:65378266-65378285 MS.gene96243:intron 30.0%
CTACAGTAAGTATACAATGT+GGG - chr2.2:65378574-65378593 None:intergenic 30.0%
CTATGTCGACAATAATACAA+GGG - chr2.2:65378178-65378197 None:intergenic 30.0%
GAAAGCAAATCACTTTCAAA+AGG - chr2.2:65383677-65383696 None:intergenic 30.0%
GATGCCAATAGATAAGAAAA+GGG - chr2.2:65382211-65382230 None:intergenic 30.0%
GGTAGCAAAATGAATTTCAA+TGG - chr2.2:65383721-65383740 None:intergenic 30.0%
GTCCTTACATTTCAATTTCT+CGG + chr2.2:65378412-65378431 MS.gene96243:intron 30.0%
TAATCTTGCCATTATCAGTA+TGG - chr2.2:65380746-65380765 None:intergenic 30.0%
TACCCATTTCTTACTACTAA+AGG + chr2.2:65383007-65383026 MS.gene96243:intron 30.0%
TATGTCGACAATAATACAAG+GGG - chr2.2:65378177-65378196 None:intergenic 30.0%
TATTGTAATGCAACCATCAA+GGG + chr2.2:65383856-65383875 MS.gene96243:intron 30.0%
TCAATCCCTTCTTGAATTTA+AGG + chr2.2:65379003-65379022 MS.gene96243:CDS 30.0%
TCATGAATTGAATGTTTACC+AGG + chr2.2:65382314-65382333 MS.gene96243:CDS 30.0%
TCCCTTTAGTAGTAAGAAAT+GGG - chr2.2:65383012-65383031 None:intergenic 30.0%
TCCTTACATTTCAATTTCTC+GGG + chr2.2:65378413-65378432 MS.gene96243:intron 30.0%
TCTATGTCGACAATAATACA+AGG - chr2.2:65378179-65378198 None:intergenic 30.0%
TGAAAGATGTTTGATCTACT+TGG + chr2.2:65378642-65378661 MS.gene96243:CDS 30.0%
TGATGCCAATAGATAAGAAA+AGG - chr2.2:65382212-65382231 None:intergenic 30.0%
TGGTAAACATTCAATTCATG+AGG - chr2.2:65382315-65382334 None:intergenic 30.0%
TGTTATTATATATCTGCCAG+TGG + chr2.2:65380321-65380340 MS.gene96243:intron 30.0%
TTAAAATAGTTAGGGTACGT+AGG + chr2.2:65378231-65378250 MS.gene96243:intron 30.0%
TTAAAGATGTTTACTGCTCT+GGG + chr2.2:65378015-65378034 MS.gene96243:CDS 30.0%
TTAATGAGTGGATGTGTTAT+TGG + chr2.2:65383448-65383467 MS.gene96243:intron 30.0%
TTATTGTAATGCAACCATCA+AGG + chr2.2:65383855-65383874 MS.gene96243:intron 30.0%
TTGGAAATGAGATGTTAAGA+TGG + chr2.2:65383467-65383486 MS.gene96243:intron 30.0%
TTGTGAGGATAATGAAAACT+AGG + chr2.2:65384105-65384124 MS.gene96243:CDS 30.0%
TTTGAGGGAATCTTGTAATA+GGG + chr2.2:65383601-65383620 MS.gene96243:intron 30.0%
! AGACAAAGGTACAAATTGTA+AGG - chr2.2:65377945-65377964 None:intergenic 30.0%
! AGACATTTTTATTCAGCTTC+TGG + chr2.2:65381069-65381088 MS.gene96243:intron 30.0%
! ATGGGTATTGTACCTTTATA+CGG - chr2.2:65382994-65383013 None:intergenic 30.0%
! ATTTTTATTCAGCTTCTGGT+TGG + chr2.2:65381073-65381092 MS.gene96243:intron 30.0%
! GTAGGTTCTTTTGAATTTGA+AGG - chr2.2:65383338-65383357 None:intergenic 30.0%
! GTTTAAGGTATGCATATCTT+TGG + chr2.2:65381028-65381047 MS.gene96243:intron 30.0%
! GTTTCCCTTTTCTTATCTAT+TGG + chr2.2:65382204-65382223 MS.gene96243:intron 30.0%
! TTTCCCATGTCTTTTTCTTT+GGG + chr2.2:65381135-65381154 MS.gene96243:intron 30.0%
! TTTTCCCATGTCTTTTTCTT+TGG + chr2.2:65381134-65381153 MS.gene96243:intron 30.0%
! TTTTTCGTCCATACTGATAA+TGG + chr2.2:65380735-65380754 MS.gene96243:intron 30.0%
!! GTTTTTGGATTCAGTTAGAA+AGG + chr2.2:65381616-65381635 MS.gene96243:intron 30.0%
!! TTTCTTTGGGAATTTTAACC+TGG + chr2.2:65381148-65381167 MS.gene96243:intron 30.0%
!! TTTTGAGGGAATCTTGTAAT+AGG + chr2.2:65383600-65383619 MS.gene96243:intron 30.0%
!!! ACTTTTTTTTGTAAAGGGCA+AGG + chr2.2:65380770-65380789 MS.gene96243:intron 30.0%
!!! AGGAATTTGGCATTTTTTCT+TGG + chr2.2:65381489-65381508 MS.gene96243:intron 30.0%
!!! ATAAAGTCCTGGTTTTATTC+AGG + chr2.2:65380604-65380623 MS.gene96243:CDS 30.0%
!!! CACGTGCTGAAATTTTTTAT+TGG + chr2.2:65379829-65379848 MS.gene96243:intron 30.0%
!!! GCAAACTAAGGTTTCTTTTT+TGG - chr2.2:65379321-65379340 None:intergenic 30.0%
!!! TATTTTGTTTTTACCCTCAG+TGG + chr2.2:65381882-65381901 MS.gene96243:intron 30.0%
AAAAATAAGACCCAAGTTGC+TGG - chr2.2:65380416-65380435 None:intergenic 35.0%
AAAACCTTATCAAGAATGGC+AGG - chr2.2:65378730-65378749 None:intergenic 35.0%
AAAAGAACCTACTTAGCATG+GGG + chr2.2:65383346-65383365 MS.gene96243:intron 35.0%
AAAGACATGGGAAAAAACTG+AGG - chr2.2:65381129-65381148 None:intergenic 35.0%
AAGTATACAATGTGGGACAA+TGG - chr2.2:65378567-65378586 None:intergenic 35.0%
AATACAAGAGTTCAACGAAG+AGG - chr2.2:65380155-65380174 None:intergenic 35.0%
AATGCTCAATTATCAACCAC+TGG - chr2.2:65380340-65380359 None:intergenic 35.0%
AATGTCTAACATGTGCTTCT+TGG + chr2.2:65380390-65380409 MS.gene96243:intron 35.0%
ACAAGTGAAAGGTCATTTGA+TGG - chr2.2:65381447-65381466 None:intergenic 35.0%
ACCCGAGAAATTGAAATGTA+AGG - chr2.2:65378417-65378436 None:intergenic 35.0%
ACTGATCCCAACTAACTAAT+TGG - chr2.2:65381594-65381613 None:intergenic 35.0%
ACTTCAGAAGAGGAATTAGA+GGG + chr2.2:65380573-65380592 MS.gene96243:CDS 35.0%
AGAGTTTCAGGAATAGTGTT+TGG + chr2.2:65381692-65381711 MS.gene96243:intron 35.0%
AGCAGCCTTAAATTCAAGAA+GGG - chr2.2:65379011-65379030 None:intergenic 35.0%
AGGACAATTATGAGAGTTTC+AGG + chr2.2:65381680-65381699 MS.gene96243:intron 35.0%
ATAGGGTTTCTCTATGCTTA+TGG + chr2.2:65378832-65378851 MS.gene96243:intron 35.0%
ATCAGACATCACTAGTAACT+CGG - chr2.2:65384317-65384336 None:intergenic 35.0%
ATCTTGGAAAACTCTTTCTG+TGG - chr2.2:65383229-65383248 None:intergenic 35.0%
ATGAAAATCAGATACGAAGG+GGG - chr2.2:65379268-65379287 None:intergenic 35.0%
ATGCTCAAATGCGTCTTTAA+TGG - chr2.2:65379086-65379105 None:intergenic 35.0%
ATGTTAGTAAAAACCTGCTG+AGG - chr2.2:65380937-65380956 None:intergenic 35.0%
CAAAAGAACCTACTTAGCAT+GGG + chr2.2:65383345-65383364 MS.gene96243:intron 35.0%
CAAGATATCAAGGATTCTAC+TGG + chr2.2:65382723-65382742 MS.gene96243:CDS 35.0%
CATATCAAAATAGCGTTGTC+TGG + chr2.2:65384247-65384266 MS.gene96243:intron 35.0%
CATTGAAAAAGACCTCTGTT+GGG - chr2.2:65377764-65377783 None:intergenic 35.0%
CATTGCAAACAGCAAGATAT+TGG + chr2.2:65380004-65380023 MS.gene96243:intron 35.0%
CCACATTGTATACTTACTGT+AGG + chr2.2:65378572-65378591 MS.gene96243:intron 35.0%
CCTACAGTAAGTATACAATG+TGG - chr2.2:65378575-65378594 None:intergenic 35.0%
CTCATGTGGCAAAATTCTTT+AGG + chr2.2:65382485-65382504 MS.gene96243:CDS 35.0%
CTGATCCCAACTAACTAATT+GGG - chr2.2:65381593-65381612 None:intergenic 35.0%
CTGTAGATAGATACTAAAGG+TGG + chr2.2:65381761-65381780 MS.gene96243:intron 35.0%
CTTGCTAAAAGACTACTCTT+AGG + chr2.2:65380822-65380841 MS.gene96243:CDS 35.0%
GAATGAACCTGAATAAAACC+AGG - chr2.2:65380614-65380633 None:intergenic 35.0%
GAGCAAAACCTTATCAAGAA+TGG - chr2.2:65378734-65378753 None:intergenic 35.0%
GAGTTTCAGGAATAGTGTTT+GGG + chr2.2:65381693-65381712 MS.gene96243:intron 35.0%
GATAGACTCATTCCAATAAC+AGG - chr2.2:65377742-65377761 None:intergenic 35.0%
GCTTGAATGGTCTAAATCTA+AGG + chr2.2:65377695-65377714 MS.gene96243:CDS 35.0%
GTACCTTTATACGGTAAAGA+GGG - chr2.2:65382985-65383004 None:intergenic 35.0%
GTCCCTTTAGTAGTAAGAAA+TGG - chr2.2:65383013-65383032 None:intergenic 35.0%
GTCTAAATCTAAGGATCCAT+GGG + chr2.2:65377704-65377723 MS.gene96243:CDS 35.0%
GTTAAAGATGTTTACTGCTC+TGG + chr2.2:65378014-65378033 MS.gene96243:CDS 35.0%
TAACCTGATATTGACGATCT+TGG - chr2.2:65383245-65383264 None:intergenic 35.0%
TAATGTGTTGGAAGAAAGGA+TGG - chr2.2:65380179-65380198 None:intergenic 35.0%
TACCTTTATACGGTAAAGAG+GGG - chr2.2:65382984-65383003 None:intergenic 35.0%
TACTAAAGGTGGTGTAATTG+AGG + chr2.2:65381772-65381791 MS.gene96243:intron 35.0%
TACTTAGGGTGAAGTAATAG+AGG + chr2.2:65381660-65381679 MS.gene96243:intron 35.0%
TACTTCAGAAGAGGAATTAG+AGG + chr2.2:65380572-65380591 MS.gene96243:CDS 35.0%
TAGAGAAAAGGAATCACTAG+AGG - chr2.2:65378777-65378796 None:intergenic 35.0%
TAGTGGTCATACAAGACAAT+AGG + chr2.2:65383492-65383511 MS.gene96243:intron 35.0%
TATACCTGCCATTCTTGATA+AGG + chr2.2:65378723-65378742 MS.gene96243:CDS 35.0%
TATTACTGAACTCTTCCAAC+AGG + chr2.2:65384151-65384170 MS.gene96243:CDS 35.0%
TATTGTCGACATAGAGAAGA+TGG + chr2.2:65378184-65378203 MS.gene96243:intron 35.0%
TCAAAAGAACCTACTTAGCA+TGG + chr2.2:65383344-65383363 MS.gene96243:intron 35.0%
TCAGATGTACATTCAAGGAA+TGG - chr2.2:65378066-65378085 None:intergenic 35.0%
TCCTTGAAGCAAACATCAAA+GGG - chr2.2:65383751-65383770 None:intergenic 35.0%
TCTAAATCTAAGGATCCATG+GGG + chr2.2:65377705-65377724 MS.gene96243:CDS 35.0%
TCTATGTACTATGTAGTGAC+TGG + chr2.2:65383958-65383977 MS.gene96243:intron 35.0%
TCTCCTGATGTATGAACTAA+TGG - chr2.2:65378936-65378955 None:intergenic 35.0%
TCTGTTGCATGTTCAACAAA+CGG - chr2.2:65382901-65382920 None:intergenic 35.0%
TGAAAGGCAAACCTGAAATA+GGG - chr2.2:65382564-65382583 None:intergenic 35.0%
TGAATCTTAAATGTGACCGA+AGG - chr2.2:65381194-65381213 None:intergenic 35.0%
TGAGGAGAAAGATAAAGACA+TGG + chr2.2:65378979-65378998 MS.gene96243:CDS 35.0%
TGTACCTTTATACGGTAAAG+AGG - chr2.2:65382986-65383005 None:intergenic 35.0%
TTCAGCTGTGAATTTGAACT+TGG + chr2.2:65381210-65381229 MS.gene96243:intron 35.0%
TTCTATCTGAGCAAATACAG+TGG + chr2.2:65382455-65382474 MS.gene96243:CDS 35.0%
TTGAAAGGCAAACCTGAAAT+AGG - chr2.2:65382565-65382584 None:intergenic 35.0%
TTGGATTCAGTTAGAAAGGT+GGG + chr2.2:65381620-65381639 MS.gene96243:intron 35.0%
TTTCCAAGATCGTCAATATC+AGG + chr2.2:65383239-65383258 MS.gene96243:CDS 35.0%
TTTGGATGATAAACTTCGTG+CGG + chr2.2:65380539-65380558 MS.gene96243:CDS 35.0%
TTTGGATTCAGTTAGAAAGG+TGG + chr2.2:65381619-65381638 MS.gene96243:intron 35.0%
! AATGCACTTGCTCTTTTCTA+GGG + chr2.2:65378883-65378902 MS.gene96243:CDS 35.0%
! ACACACATTGGACATTTTAC+AGG - chr2.2:65380132-65380151 None:intergenic 35.0%
! ACTTACTGTAGGGATGTTTT+TGG + chr2.2:65378583-65378602 MS.gene96243:intron 35.0%
! AGATTTTCCCAAAGGGAAAA+AGG + chr2.2:65382526-65382545 MS.gene96243:CDS 35.0%
! CAGATCATCATTTGCGATTT+TGG + chr2.2:65377823-65377842 MS.gene96243:intron 35.0%
! CATTGTGAAGTGCTAAACTA+TGG - chr2.2:65383082-65383101 None:intergenic 35.0%
! CTTACTGTAGGGATGTTTTT+GGG + chr2.2:65378584-65378603 MS.gene96243:intron 35.0%
! GGAAGTAATGGAACTACTTA+GGG - chr2.2:65384228-65384247 None:intergenic 35.0%
! GTCCTTTCCTTTATTTCTTC+AGG + chr2.2:65382418-65382437 MS.gene96243:intron 35.0%
! TAAAGGCAGATTTTCCCAAA+GGG + chr2.2:65382519-65382538 MS.gene96243:CDS 35.0%
! TCAGCAGGTTTTTACTAACA+TGG + chr2.2:65380936-65380955 MS.gene96243:intron 35.0%
! TCTGAATTTTATGCCTCTGA+AGG + chr2.2:65378081-65378100 MS.gene96243:CDS 35.0%
! TGAGTTGACCCAAAACATAT+TGG - chr2.2:65379216-65379235 None:intergenic 35.0%
! TGGAAGTAATGGAACTACTT+AGG - chr2.2:65384229-65384248 None:intergenic 35.0%
!! AGAGTTGATTGCCAAGTTTT+TGG + chr2.2:65380521-65380540 MS.gene96243:CDS 35.0%
!! CTTCTGAAGTCTAAACTAGA+AGG - chr2.2:65383289-65383308 None:intergenic 35.0%
!! GAGATGTTAAGATGGATTAG+TGG + chr2.2:65383475-65383494 MS.gene96243:intron 35.0%
!! GTGAACATTATTGGCTTGAA+TGG + chr2.2:65377682-65377701 MS.gene96243:CDS 35.0%
!! GTTTTGCTATATCTGTTGGT+CGG + chr2.2:65379144-65379163 MS.gene96243:intron 35.0%
!! TAATAAGGGTACTTCAGAAG+AGG + chr2.2:65380563-65380582 MS.gene96243:CDS 35.0%
!! TGTGGTTTTGCTATATCTGT+TGG + chr2.2:65379140-65379159 MS.gene96243:intron 35.0%
!! TTGGACATTGCTTTTAGAGA+AGG + chr2.2:65381319-65381338 MS.gene96243:intron 35.0%
!!! AGTTGGGATCAGTTAGTTTT+TGG + chr2.2:65381601-65381620 MS.gene96243:intron 35.0%
!!! CAGACAACGCTATTTTGATA+TGG - chr2.2:65384249-65384268 None:intergenic 35.0%
!!! GGTTTTATTCAGGTTCATTC+AGG + chr2.2:65380614-65380633 MS.gene96243:CDS 35.0%
AAACTTCGTGCGGGTAATAA+GGG + chr2.2:65380549-65380568 MS.gene96243:CDS 40.0%
AACATGCAACAGATGCCAAA+GGG + chr2.2:65382908-65382927 MS.gene96243:intron 40.0%
AATAGGAACAGATGGAACCA+TGG + chr2.2:65378283-65378302 MS.gene96243:intron 40.0%
ACACTCATTTCAATGCCTGA+TGG - chr2.2:65382155-65382174 None:intergenic 40.0%
ACAGAACAGAAGTCTACACT+GGG - chr2.2:65381359-65381378 None:intergenic 40.0%
ACATGGGAAAAAACTGAGGT+TGG - chr2.2:65381125-65381144 None:intergenic 40.0%
AGACTAATGTCCAACCTTCT+AGG - chr2.2:65381852-65381871 None:intergenic 40.0%
AGAGCAAGTGCATTCTTTGA+AGG - chr2.2:65378877-65378896 None:intergenic 40.0%
AGAGTTTCAGGAACAGAGTT+TGG + chr2.2:65381804-65381823 MS.gene96243:intron 40.0%
AGATTACTTGAAGCATGTGG+AGG + chr2.2:65378134-65378153 MS.gene96243:CDS 40.0%
AGGCCATTAGTTCATACATC+AGG + chr2.2:65378930-65378949 MS.gene96243:CDS 40.0%
AGTCTACATGTGGCAAACTA+AGG - chr2.2:65379333-65379352 None:intergenic 40.0%
AGTGTTCATGTCTTGACAAC+AGG + chr2.2:65382170-65382189 MS.gene96243:CDS 40.0%
AGTTCATACATCAGGAGAAC+TGG + chr2.2:65378938-65378957 MS.gene96243:CDS 40.0%
ATACAATGTGGGACAATGGA+AGG - chr2.2:65378563-65378582 None:intergenic 40.0%
ATCCCAACTAACTAATTGGG+TGG - chr2.2:65381590-65381609 None:intergenic 40.0%
ATCTGAGCAAATACAGTGGA+AGG + chr2.2:65382459-65382478 MS.gene96243:CDS 40.0%
ATGGTGAACACGTAGGAATT+TGG + chr2.2:65381476-65381495 MS.gene96243:intron 40.0%
ATGTGAAAGGAGAGATCCTT+TGG + chr2.2:65378331-65378350 MS.gene96243:intron 40.0%
ATTGGCGAAATAGGAACAGA+TGG + chr2.2:65378275-65378294 MS.gene96243:intron 40.0%
ATTGGTACCACCACATAGTT+GGG + chr2.2:65381919-65381938 MS.gene96243:intron 40.0%
CAAGCTGGAAGGAATGTTTA+AGG + chr2.2:65381013-65381032 MS.gene96243:CDS 40.0%
CACTCATTTCAATGCCTGAT+GGG - chr2.2:65382154-65382173 None:intergenic 40.0%
CATGTATTTCACACCTTCAG+AGG - chr2.2:65378097-65378116 None:intergenic 40.0%
CATTCCAATAACAGGAAGAC+TGG - chr2.2:65377734-65377753 None:intergenic 40.0%
CCATTGAAAAAGACCTCTGT+TGG - chr2.2:65377765-65377784 None:intergenic 40.0%
CCTTGAAGCAAACATCAAAG+GGG - chr2.2:65383750-65383769 None:intergenic 40.0%
CTAAATCTAAGGATCCATGG+GGG + chr2.2:65377706-65377725 MS.gene96243:CDS 40.0%
CTAGGTCTCAAGTACTTAGA+AGG + chr2.2:65381723-65381742 MS.gene96243:intron 40.0%
CTTGAAGCAAACATCAAAGG+GGG - chr2.2:65383749-65383768 None:intergenic 40.0%
GACAGATAGGGTTAATGTGT+TGG - chr2.2:65380191-65380210 None:intergenic 40.0%
GAGCAGCCTTAAATTCAAGA+AGG - chr2.2:65379012-65379031 None:intergenic 40.0%
GAGTTTCAGGAACAGAGTTT+GGG + chr2.2:65381805-65381824 MS.gene96243:intron 40.0%
GCAAAATAGTGAGTACCTGA+CGG - chr2.2:65379120-65379139 None:intergenic 40.0%
GCACAGAAACTTGATGTGTT+AGG - chr2.2:65380089-65380108 None:intergenic 40.0%
GGGTTAATGTGTTGGAAGAA+AGG - chr2.2:65380183-65380202 None:intergenic 40.0%
GGTCTAAATCTAAGGATCCA+TGG + chr2.2:65377703-65377722 MS.gene96243:CDS 40.0%
GGTGAATGCAATTCAGTTGA+AGG + chr2.2:65383179-65383198 MS.gene96243:intron 40.0%
GGTTTCTCTATGCTTATGGA+TGG + chr2.2:65378836-65378855 MS.gene96243:CDS 40.0%
GTAAGCACGATGTTTCATTG+TGG + chr2.2:65380636-65380655 MS.gene96243:intron 40.0%
GTATAATCCCCATGCTAAGT+AGG - chr2.2:65383356-65383375 None:intergenic 40.0%
GTCCTTGAAGCAAACATCAA+AGG - chr2.2:65383752-65383771 None:intergenic 40.0%
GTCTCAAGTACTTAGAAGGT+TGG + chr2.2:65381727-65381746 MS.gene96243:intron 40.0%
GTGTTCATGTCTTGACAACA+GGG + chr2.2:65382171-65382190 MS.gene96243:CDS 40.0%
TAAACTTCGTGCGGGTAATA+AGG + chr2.2:65380548-65380567 MS.gene96243:CDS 40.0%
TAAAGGAAAGGACCATGTCA+AGG - chr2.2:65382411-65382430 None:intergenic 40.0%
TAAATAGATGGTTCCTCAGC+AGG + chr2.2:65380921-65380940 MS.gene96243:intron 40.0%
TACAGAACAGAAGTCTACAC+TGG - chr2.2:65381360-65381379 None:intergenic 40.0%
TATAACAGGATGTCCAACCA+AGG - chr2.2:65383884-65383903 None:intergenic 40.0%
TATCTAAGTTCCTGGCATGA+AGG - chr2.2:65377794-65377813 None:intergenic 40.0%
TATTGGTACCACCACATAGT+TGG + chr2.2:65381918-65381937 MS.gene96243:intron 40.0%
TCAAACTCATTTCGGCGTTA+TGG + chr2.2:65383150-65383169 MS.gene96243:intron 40.0%
TCCACATGCTTCAAGTAATC+TGG - chr2.2:65378135-65378154 None:intergenic 40.0%
TCCAGATTACTTGAAGCATG+TGG + chr2.2:65378131-65378150 MS.gene96243:CDS 40.0%
TCCCAACTAACTAATTGGGT+GGG - chr2.2:65381589-65381608 None:intergenic 40.0%
TGAAAACTGAGAGAAACTGC+CGG - chr2.2:65378366-65378385 None:intergenic 40.0%
TGAAAATCAGATACGAAGGG+GGG - chr2.2:65379267-65379286 None:intergenic 40.0%
TTCAAGTGACTTCCTTGACA+TGG + chr2.2:65382396-65382415 MS.gene96243:intron 40.0%
TTCAGGAATAGTGTTTGGGA+GGG + chr2.2:65381697-65381716 MS.gene96243:intron 40.0%
TTGACCCAAAACATATTGGC+TGG - chr2.2:65379212-65379231 None:intergenic 40.0%
TTGGATGATAAACTTCGTGC+GGG + chr2.2:65380540-65380559 MS.gene96243:CDS 40.0%
TTTAGGTCACTGTGTCCTAA+AGG + chr2.2:65382502-65382521 MS.gene96243:CDS 40.0%
TTTCAGGAATAGTGTTTGGG+AGG + chr2.2:65381696-65381715 MS.gene96243:intron 40.0%
TTTGACAATGGTGAACACGT+AGG + chr2.2:65381469-65381488 MS.gene96243:intron 40.0%
TTTGCAGACAAGATTGCAAG+AGG + chr2.2:65378615-65378634 MS.gene96243:intron 40.0%
! AAAGGTCATTTGATGGCTGT+CGG - chr2.2:65381440-65381459 None:intergenic 40.0%
! AAGAAAGCATAACGGCTAGA+AGG - chr2.2:65384408-65384427 None:intergenic 40.0%
! AAGCTCCAGCCAATATGTTT+TGG + chr2.2:65379204-65379223 MS.gene96243:intron 40.0%
! AGCTCCAGCCAATATGTTTT+GGG + chr2.2:65379205-65379224 MS.gene96243:intron 40.0%
! AGGTACTCACTATTTTGCTG+TGG + chr2.2:65379122-65379141 MS.gene96243:intron 40.0%
! CTAAAGGCAGATTTTCCCAA+AGG + chr2.2:65382518-65382537 MS.gene96243:CDS 40.0%
! CTTTGGGAAAATCTGCCTTT+AGG - chr2.2:65382520-65382539 None:intergenic 40.0%
! GAATGCACTTGCTCTTTTCT+AGG + chr2.2:65378882-65378901 MS.gene96243:CDS 40.0%
! GATCTATAACCTTTTCCTCG+TGG + chr2.2:65384053-65384072 MS.gene96243:intron 40.0%
! GGAAGTCACTTGAAGTATCA+AGG - chr2.2:65382390-65382409 None:intergenic 40.0%
! GTGCAAGCAAGAAAGCATAA+CGG - chr2.2:65384416-65384435 None:intergenic 40.0%
! TCTTCAACTGCATCGATGAA+AGG - chr2.2:65380968-65380987 None:intergenic 40.0%
! TTCTACTGGTATCGAAGACA+AGG + chr2.2:65382737-65382756 MS.gene96243:CDS 40.0%
! TTTATGGCTTGTGCTTAACC+TGG - chr2.2:65382335-65382354 None:intergenic 40.0%
!! AAAGAGTGCTTCAATTGACG+CGG + chr2.2:65380845-65380864 MS.gene96243:CDS 40.0%
!! ATGTTTTGGGTCAACTCATC+TGG + chr2.2:65379218-65379237 MS.gene96243:intron 40.0%
!! GACGAAAGTATCTAAGTTCC+TGG - chr2.2:65377802-65377821 None:intergenic 40.0%
!! TTAGTTTGCCACATGTAGAC+TGG + chr2.2:65379332-65379351 MS.gene96243:intron 40.0%
!!! CAGAGGTCTTTTTCAATGGT+TGG + chr2.2:65377766-65377785 MS.gene96243:intron 40.0%
!!! CCAACAGAGGTCTTTTTCAA+TGG + chr2.2:65377762-65377781 MS.gene96243:intron 40.0%
AAAGGGCAAGGATGTGTTTG+AGG + chr2.2:65380782-65380801 MS.gene96243:intron 45.0%
AACTTGGCAATCAACTCTGC+AGG - chr2.2:65380519-65380538 None:intergenic 45.0%
AAGCAAACATCAAAGGGGGA+GGG - chr2.2:65383745-65383764 None:intergenic 45.0%
ACATCCATGGGTGGATATGT+TGG - chr2.2:65382285-65382304 None:intergenic 45.0%
ACCCCACCCAATTAGTTAGT+TGG + chr2.2:65381584-65381603 MS.gene96243:intron 45.0%
ACTCTGCAATCACTTGCATG+TGG + chr2.2:65382771-65382790 MS.gene96243:CDS 45.0%
AGAACAGAAGTCTACACTGG+GGG - chr2.2:65381357-65381376 None:intergenic 45.0%
AGTTAGGGTACGTAGGTAGA+AGG + chr2.2:65378238-65378257 MS.gene96243:intron 45.0%
ATACATCAGGAGAACTGGAC+AGG + chr2.2:65378943-65378962 MS.gene96243:CDS 45.0%
ATCCACTGCTTCACCTAATC+TGG - chr2.2:65377974-65377993 None:intergenic 45.0%
ATCCATGATCTCCAAGGTGA+AGG + chr2.2:65380872-65380891 MS.gene96243:intron 45.0%
ATGAGGAAGTCTGACATCCA+TGG - chr2.2:65382298-65382317 None:intergenic 45.0%
ATGCAGTTGAAGACTGAGTG+TGG + chr2.2:65380975-65380994 MS.gene96243:intron 45.0%
CAGAACAGAAGTCTACACTG+GGG - chr2.2:65381358-65381377 None:intergenic 45.0%
CAGTTCACAAACAAGCTGGA+AGG + chr2.2:65381002-65381021 MS.gene96243:CDS 45.0%
CCAAGACTCAAGTACCTAGA+AGG + chr2.2:65381835-65381854 MS.gene96243:intron 45.0%
CCCAACTAACTAATTGGGTG+GGG - chr2.2:65381588-65381607 None:intergenic 45.0%
CCCCACCCAATTAGTTAGTT+GGG + chr2.2:65381585-65381604 MS.gene96243:intron 45.0%
CCCCTTTGATGTTTGCTTCA+AGG + chr2.2:65383747-65383766 MS.gene96243:intron 45.0%
CCTTCTAGGTACTTGAGTCT+TGG - chr2.2:65381838-65381857 None:intergenic 45.0%
CTGCAACCAAATCTCTACAG+CGG + chr2.2:65384358-65384377 MS.gene96243:intron 45.0%
CTTTATACGGTAAAGAGGGG+CGG - chr2.2:65382981-65383000 None:intergenic 45.0%
GAAAACTGAGAGAAACTGCC+GGG - chr2.2:65378365-65378384 None:intergenic 45.0%
GAAAATCAGATACGAAGGGG+GGG - chr2.2:65379266-65379285 None:intergenic 45.0%
GAACATGCAACAGATGCCAA+AGG + chr2.2:65382907-65382926 MS.gene96243:intron 45.0%
GAATGAGTCTATCCCAACAG+AGG + chr2.2:65377749-65377768 MS.gene96243:CDS 45.0%
GACTCAAGTACCTAGAAGGT+TGG + chr2.2:65381839-65381858 MS.gene96243:intron 45.0%
GATGAGTCTTCCCAACTATG+TGG - chr2.2:65381932-65381951 None:intergenic 45.0%
GCATCTTATCAATCTCCGTC+AGG + chr2.2:65379102-65379121 MS.gene96243:CDS 45.0%
GGAAAAATGAGCCTTCACCT+TGG - chr2.2:65380886-65380905 None:intergenic 45.0%
GGAGAAATCCATGATCTCCA+AGG + chr2.2:65380866-65380885 MS.gene96243:CDS 45.0%
GTAGCAATGATGTCACCTGT+TGG - chr2.2:65384169-65384188 None:intergenic 45.0%
GTGGTTGCATGGTACTCTAT+TGG + chr2.2:65381901-65381920 MS.gene96243:intron 45.0%
GTTAGGGTACGTAGGTAGAA+GGG + chr2.2:65378239-65378258 MS.gene96243:intron 45.0%
TAAACCATGCCACGAGGAAA+AGG - chr2.2:65384065-65384084 None:intergenic 45.0%
TACATCAGGAGAACTGGACA+GGG + chr2.2:65378944-65378963 MS.gene96243:CDS 45.0%
TAGCCAGTTCACAAACAAGC+TGG + chr2.2:65380998-65381017 MS.gene96243:CDS 45.0%
TAGTGTTTGGGAGGGAATCT+AGG + chr2.2:65381705-65381724 MS.gene96243:intron 45.0%
TCAACGAAGAGGACACACAT+TGG - chr2.2:65380144-65380163 None:intergenic 45.0%
TCAATGCCCTTGAGTCATTG+AGG + chr2.2:65378906-65378925 MS.gene96243:CDS 45.0%
TCAGTTGAAGGAGACAGTAG+AGG + chr2.2:65383191-65383210 MS.gene96243:CDS 45.0%
TCCCAAAGGGAAAAAGGAGT+TGG + chr2.2:65382532-65382551 MS.gene96243:CDS 45.0%
TCGAAGACAAGGAACTGAGA+AGG + chr2.2:65382748-65382767 MS.gene96243:CDS 45.0%
TCGTGGCATGGTTTATATGC+AGG + chr2.2:65384070-65384089 MS.gene96243:intron 45.0%
TCTTCCACATCTCTACCCTT+TGG - chr2.2:65382926-65382945 None:intergenic 45.0%
TCTTTGATGAGTGCAGGTAC+TGG + chr2.2:65382259-65382278 MS.gene96243:intron 45.0%
TGAAAGGAGAGATCCTTTGG+AGG + chr2.2:65378334-65378353 MS.gene96243:intron 45.0%
TGACCTGCCAGACTTTAGTA+GGG - chr2.2:65380242-65380261 None:intergenic 45.0%
TGAGGAAGTCTGACATCCAT+GGG - chr2.2:65382297-65382316 None:intergenic 45.0%
TGCATATAAACCATGCCACG+AGG - chr2.2:65384071-65384090 None:intergenic 45.0%
TTCCAGATTAGGTGAAGCAG+TGG + chr2.2:65377969-65377988 MS.gene96243:intron 45.0%
! AAGGTCATTTGATGGCTGTC+GGG - chr2.2:65381439-65381458 None:intergenic 45.0%
! AGCCAACTCCTTTTTCCCTT+TGG - chr2.2:65382537-65382556 None:intergenic 45.0%
! ATAACCTTTTCCTCGTGGCA+TGG + chr2.2:65384058-65384077 MS.gene96243:intron 45.0%
! CTTCCAGCTTGTTTGTGAAC+TGG - chr2.2:65381004-65381023 None:intergenic 45.0%
! GCCAACTCCTTTTTCCCTTT+GGG - chr2.2:65382536-65382555 None:intergenic 45.0%
! TTTGCTCACCACTAGCTTCT+TGG + chr2.2:65378747-65378766 MS.gene96243:intron 45.0%
! TTTTACCCTCAGTGGTTGCA+TGG + chr2.2:65381890-65381909 MS.gene96243:intron 45.0%
!! AACTGGACAGGGCATTGTTA+TGG + chr2.2:65378955-65378974 MS.gene96243:CDS 45.0%
!! ACAGGGCATTGTTATGGATG+AGG + chr2.2:65378961-65378980 MS.gene96243:CDS 45.0%
!! AAAAAAATTCAAAAATTTAA+AGG - chr2.2:65379553-65379572 None:intergenic 5.0%
!!! TAATATATTTTTTTTTTTGA+GGG + chr2.2:65383586-65383605 MS.gene96243:intron 5.0%
!!! TATTTATTTAAAATGTTAAA+TGG - chr2.2:65380907-65380926 None:intergenic 5.0%
AAGGCCAGACAACAGTGAAC+AGG - chr2.2:65384389-65384408 None:intergenic 50.0%
AGCAAACATCAAAGGGGGAG+GGG - chr2.2:65383744-65383763 None:intergenic 50.0%
AGCCTTCACCTTGGAGATCA+TGG - chr2.2:65380877-65380896 None:intergenic 50.0%
AGGAACAGATGGAACCATGG+AGG + chr2.2:65378286-65378305 MS.gene96243:intron 50.0%
AGGCTGCTCTTGACACAACA+TGG + chr2.2:65379023-65379042 MS.gene96243:CDS 50.0%
AGGTCGATGCTGCTATTGTG+AGG + chr2.2:65384090-65384109 MS.gene96243:intron 50.0%
ATCCTTCAGACAGTCATCCC+AGG + chr2.2:65382115-65382134 MS.gene96243:CDS 50.0%
ATTTCGGCGTTATGGAGTGC+AGG + chr2.2:65383158-65383177 MS.gene96243:intron 50.0%
CAACCCTACTAAAGTCTGGC+AGG + chr2.2:65380236-65380255 MS.gene96243:intron 50.0%
CACATGTAGACTGGAGAGTG+GGG + chr2.2:65379341-65379360 MS.gene96243:intron 50.0%
CACGCAACCCTACTAAAGTC+TGG + chr2.2:65380232-65380251 MS.gene96243:intron 50.0%
CCACATGTAGACTGGAGAGT+GGG + chr2.2:65379340-65379359 MS.gene96243:intron 50.0%
CGCCCCTCTTTACCGTATAA+AGG + chr2.2:65382979-65382998 MS.gene96243:CDS 50.0%
CTGACCTGCCAGACTTTAGT+AGG - chr2.2:65380243-65380262 None:intergenic 50.0%
GAAGCAAACATCAAAGGGGG+AGG - chr2.2:65383746-65383765 None:intergenic 50.0%
GAGGATAGCCAAGAAGCTAG+TGG - chr2.2:65378758-65378777 None:intergenic 50.0%
GAGTACCATGCAACCACTGA+GGG - chr2.2:65381898-65381917 None:intergenic 50.0%
GAGTCTTCCCAACTATGTGG+TGG - chr2.2:65381929-65381948 None:intergenic 50.0%
GATGCCAAAGGGTAGAGATG+TGG + chr2.2:65382919-65382938 MS.gene96243:intron 50.0%
GCGAGAACAAAACTCCCATC+AGG + chr2.2:65382137-65382156 MS.gene96243:CDS 50.0%
GGCACCAGTCTTCCTGTTAT+TGG + chr2.2:65377727-65377746 MS.gene96243:CDS 50.0%
GGCTGCTCTTGACACAACAT+GGG + chr2.2:65379024-65379043 MS.gene96243:CDS 50.0%
GGGCACACTTGATAAAGTCC+TGG + chr2.2:65380593-65380612 MS.gene96243:CDS 50.0%
GTTGGCTGTCTCCCTATTTC+AGG + chr2.2:65382550-65382569 MS.gene96243:CDS 50.0%
TAGACTGGAGAGTGGGGAAT+GGG + chr2.2:65379347-65379366 MS.gene96243:intron 50.0%
TGCACCTGTTCACTGTTGTC+TGG + chr2.2:65384382-65384401 MS.gene96243:CDS 50.0%
TGCTTCTTGGCCAGCAACTT+GGG + chr2.2:65380403-65380422 MS.gene96243:intron 50.0%
TGGCAATCAACTCTGCAGGT+CGG - chr2.2:65380515-65380534 None:intergenic 50.0%
! AGAGTACCATGCAACCACTG+AGG - chr2.2:65381899-65381918 None:intergenic 50.0%
! GATCCTTTGGAGGAGAATCC+CGG + chr2.2:65378344-65378363 MS.gene96243:intron 50.0%
! TTTCTGTGCTGCTGCATGTC+AGG + chr2.2:65380100-65380119 MS.gene96243:intron 50.0%
!!! ATGGGAGTTTTGTTCTCGCC+TGG - chr2.2:65382136-65382155 None:intergenic 50.0%
!!! TGGGAGTTTTGTTCTCGCCT+GGG - chr2.2:65382135-65382154 None:intergenic 50.0%
ATGGTTGGCACCTTCATGCC+AGG + chr2.2:65377781-65377800 MS.gene96243:intron 55.0%
CAAACATCAAAGGGGGAGGG+GGG - chr2.2:65383742-65383761 None:intergenic 55.0%
CCCACTCTCCAGTCTACATG+TGG - chr2.2:65379343-65379362 None:intergenic 55.0%
CTGGCCAACATATCCACCCA+TGG + chr2.2:65382278-65382297 MS.gene96243:CDS 55.0%
GCAAACATCAAAGGGGGAGG+GGG - chr2.2:65383743-65383762 None:intergenic 55.0%
GCCACATGTAGACTGGAGAG+TGG + chr2.2:65379339-65379358 MS.gene96243:intron 55.0%
GGAAGTCTGACATCCATGGG+TGG - chr2.2:65382294-65382313 None:intergenic 55.0%
GGCCTGCCTCAATGACTCAA+GGG - chr2.2:65378915-65378934 None:intergenic 55.0%
GGGAAAGGCTGTTGCAGACA+AGG - chr2.2:65379246-65379265 None:intergenic 55.0%
GTAGACTGGAGAGTGGGGAA+TGG + chr2.2:65379346-65379365 MS.gene96243:intron 55.0%
GTGCAGCCGCTGTAGAGATT+TGG - chr2.2:65384367-65384386 None:intergenic 55.0%
GTGCTTCTTGGCCAGCAACT+TGG + chr2.2:65380402-65380421 MS.gene96243:intron 55.0%
TCAGATACGAAGGGGGGGAA+AGG - chr2.2:65379261-65379280 None:intergenic 55.0%
TGCCCTTGAGTCATTGAGGC+AGG + chr2.2:65378910-65378929 MS.gene96243:CDS 55.0%
TGGCCTGCCTCAATGACTCA+AGG - chr2.2:65378916-65378935 None:intergenic 55.0%
! AGCGTTGTCTGGTCTTCCGA+TGG + chr2.2:65384258-65384277 MS.gene96243:intron 55.0%
! AGCTTCTGGTTGGCATGCAC+TGG + chr2.2:65381083-65381102 MS.gene96243:intron 55.0%
! TCCAACCAAGGCACCCTTGA+TGG - chr2.2:65383872-65383891 None:intergenic 55.0%
!! ACAGTGGAAGGCGTCTCATG+TGG + chr2.2:65382471-65382490 MS.gene96243:CDS 55.0%
!! ACCATCAAGGGTGCCTTGGT+TGG + chr2.2:65383868-65383887 MS.gene96243:intron 55.0%
!! TGCAACCATCAAGGGTGCCT+TGG + chr2.2:65383864-65383883 MS.gene96243:intron 55.0%
CGCCTGGGATGACTGTCTGA+AGG - chr2.2:65382120-65382139 None:intergenic 60.0%
CTGCCGGGATTCTCCTCCAA+AGG - chr2.2:65378350-65378369 None:intergenic 60.0%
CAGGAAGACTGGTGCCCCCA+TGG - chr2.2:65377723-65377742 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 65377670 65384449 65377670 ID=MS.gene96243
chr2.2 mRNA 65377670 65384449 65377670 ID=MS.gene96243.t1;Parent=MS.gene96243
chr2.2 exon 65377670 65377770 65377670 ID=MS.gene96243.t1.exon1;Parent=MS.gene96243.t1
chr2.2 CDS 65377670 65377770 65377670 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65377975 65378155 65377975 ID=MS.gene96243.t1.exon2;Parent=MS.gene96243.t1
chr2.2 CDS 65377975 65378155 65377975 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65378622 65378744 65378622 ID=MS.gene96243.t1.exon3;Parent=MS.gene96243.t1
chr2.2 CDS 65378622 65378744 65378622 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65378836 65379123 65378836 ID=MS.gene96243.t1.exon4;Parent=MS.gene96243.t1
chr2.2 CDS 65378836 65379123 65378836 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65380510 65380635 65380510 ID=MS.gene96243.t1.exon5;Parent=MS.gene96243.t1
chr2.2 CDS 65380510 65380635 65380510 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65380786 65380887 65380786 ID=MS.gene96243.t1.exon6;Parent=MS.gene96243.t1
chr2.2 CDS 65380786 65380887 65380786 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65380981 65381034 65380981 ID=MS.gene96243.t1.exon7;Parent=MS.gene96243.t1
chr2.2 CDS 65380981 65381034 65380981 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65382086 65382192 65382086 ID=MS.gene96243.t1.exon8;Parent=MS.gene96243.t1
chr2.2 CDS 65382086 65382192 65382086 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65382275 65382335 65382275 ID=MS.gene96243.t1.exon9;Parent=MS.gene96243.t1
chr2.2 CDS 65382275 65382335 65382275 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65382440 65382571 65382440 ID=MS.gene96243.t1.exon10;Parent=MS.gene96243.t1
chr2.2 CDS 65382440 65382571 65382440 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65382678 65382815 65382678 ID=MS.gene96243.t1.exon11;Parent=MS.gene96243.t1
chr2.2 CDS 65382678 65382815 65382678 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65382920 65383000 65382920 ID=MS.gene96243.t1.exon12;Parent=MS.gene96243.t1
chr2.2 CDS 65382920 65383000 65382920 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65383180 65383260 65383180 ID=MS.gene96243.t1.exon13;Parent=MS.gene96243.t1
chr2.2 CDS 65383180 65383260 65383180 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65384092 65384172 65384092 ID=MS.gene96243.t1.exon14;Parent=MS.gene96243.t1
chr2.2 CDS 65384092 65384172 65384092 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
chr2.2 exon 65384378 65384449 65384378 ID=MS.gene96243.t1.exon15;Parent=MS.gene96243.t1
chr2.2 CDS 65384378 65384449 65384378 ID=cds.MS.gene96243.t1;Parent=MS.gene96243.t1
Gene Sequence

>MS.gene96243

ATGGATAATTTAGTGAACATTATTGGCTTGAATGGTCTAAATCTAAGGATCCATGGGGGCACCAGTCTTCCTGTTATTGGAATGAGTCTATCCCAACAGAGGTCTTTTTCAATGGTTGGCACCTTCATGCCAGGAACTTAGATACTTTCGTCTCAGATCATCATTTGCGATTTTGGACATTAAATTCTTTCTTAATATATGAATTTTAGCCGGTTGATTTTCATATTAGTTTGAATAAAGTCTTCAATTTCATCAACTTGTGATGTAGCTTACCTTACAATTTGTACCTTTGTCTTATTTTCCAGATTAGGTGAAGCAGTGGATAGAACTCTTCTCAACCATCTGTTAAAGATGTTTACTGCTCTGGGTATTTATGCAGAAAGCTTTGAGAAGCCATTCCTTGAATGTACATCTGAATTTTATGCCTCTGAAGGTGTGAAATACATGCAGCAATCAGATGTTCCAGATTACTTGAAGCATGTGGAGGTGCTTACTTTTCTTTATCCCCTTGTATTATTGTCGACATAGAGAAGATGGACAGTTAGAGTAGCAGTCAATTAGTTAAAATAGTTAGGGTACGTAGGTAGAAGGGTTATCATGTATAAATTGGCGAAATAGGAACAGATGGAACCATGGAGGCATTTCTTATTTTTATAGTTGTATGTGAAAGGAGAGATCCTTTGGAGGAGAATCCCGGCAGTTTCTCTCAGTTTTCAGTAGTACATTCTATTCTTCTGATTCTGTCCTTACATTTCAATTTCTCGGGTTCCTAACAGTTATCTTCTTAACTGAAGTTATTTTTATGATTGATTGACAGATCGATCATGCAACCATATGAGAATTTTATCTGATATTCTGACCTTAAATATTATCCCTTTTTTATATTCAATCCTTCCATTGTCCCACATTGTATACTTACTGTAGGGATGTTTTTGGGTACTCATTTTTGCAGACAAGATTGCAAGAGGAACATGAAAGATGTTTGATCTACTTGGATGCAAGTACTAAGAAGCCATTAATAACAACAACAGAAAAACAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGTTTTGCTCACCACTAGCTTCTTGGCTATCCTCTAGTGATTCCTTTTCTCTAAAATTTTCCTTGTTGCTTCAATTTTATTTCATGCTATAGGGTTTCTCTATGCTTATGGATGGAAATCGTATTGAAGACCTTCAAAGAATGCACTTGCTCTTTTCTAGGGTCAATGCCCTTGAGTCATTGAGGCAGGCCATTAGTTCATACATCAGGAGAACTGGACAGGGCATTGTTATGGATGAGGAGAAAGATAAAGACATGGTTCAATCCCTTCTTGAATTTAAGGCTGCTCTTGACACAACATGGGAAGAAAGCTTTGCTAAGAATGAAGCATTCAGTAACACCATTAAAGACGCATTTGAGCATCTTATCAATCTCCGTCAGGTACTCACTATTTTGCTGTGGTTTTGCTATATCTGTTGGTCGGTTTCCATAGAGAAATTTTAGAAATATCTTAAGATTGAAAGCTCCAGCCAATATGTTTTGGGTCAACTCATCTGGTACCTTGTCTGCAACAGCCTTTCCCCCCCTTCGTATCTGATTTTCATTGTCTTATAGATTAATCGATGAACTCGGTGCCAAAAAAGAAACCTTAGTTTGCCACATGTAGACTGGAGAGTGGGGAATGGGAAAGCCTACATTCAAATCTTTAATTAAAATGTTGGGTTAAATAAGTTTTTGGTCCCTATAAATATAGTGAATTTCGTTTTTACTCATGAAAAAAAAAGTGACATGTTTTGGTCCCTATAAAATTTTTCAGCATGTAGTTTTAGTCCCAGTTAAATTAAATTTTGTTTAATTATGCTTAAACCTTTAAATTTTTGAATTTTTTTTTTTTACAGACATGTTAAGAAATAAGAAACATTATAAGAAATTCTTTTATAAAAATTAGAATTTTTTAACATGTAATGAATTAAATATGAATTTTTTTAAACGTCTAAATTTCAAAATTAAAGTAATGAAAATTTGGACCTTATATTTTGTGGATGAACTTTTTATAATGTTGTAAACAAGTCTATAAAAAAAATCATTTAGAAATTTAAAATTTAAGCATAATTAAACAAATTTTAATTTAACAGGGACTAAAACCACGTGCTGAAATTTTTTATTGGGACCAAAACGTGTCAATTTTTTTATGAGGACTATAATCACAATTGACTATATTTGTAGGGACCAAAAACTTATTTAACCCTAAATGTCTTATGAATACTATGGCTCGTTACAAAATACCGCTGATAACAACTATACTTTTTAGATAATCAAACATTGCAAACAGCAAGATATTGGCATATTGAAGTCAAACAACTTGATATGTACCCAACTCATCAATCCTTAAAAAAAATGTACCTAACACATCAAGTTTCTGTGCTGCTGCATGTCAGGCATCATCCTGTAAAATGTCCAATGTGTGTCCTCTTCGTTGAACTCTTGTATTTCCATCCTTTCTTCCAACACATTAACCCTATCTGTCATATTTGTCATTTTTCGAATTCACGCAACCCTACTAAAGTCTGGCAGGTCAGACTGTCGAAGAATATTACAGAATATCCAATAAAAACAACTTATTTTCTTGCATACTTTTGTTATTATATATCTGCCAGTGGTTGATAATTGAGCATTACTTTTTTGTCTATGAGAGAGAGCTTGTGAAATGTCTAACATGTGCTTCTTGGCCAGCAACTTGGGTCTTATTTTTTACCTTCATGTGTGTTTTATTATGTGTGTGATTTGCAGTCAACTGATTGTTATCTTATTTTTTTTACATGGCAGAACCGACCTGCAGAGTTGATTGCCAAGTTTTTGGATGATAAACTTCGTGCGGGTAATAAGGGTACTTCAGAAGAGGAATTAGAGGGCACACTTGATAAAGTCCTGGTTTTATTCAGGTTCATTCAGGTAAGCACGATGTTTCATTGTGGAGCAGCTAACCAATTACATCTTGTTTTCTGTATTATTCATTCATGTTTGTGGTGATATCATGCATTTCTACTTATTTTTTTCGTCCATACTGATAATGGCAAGATTACTTGACTTTTTTTTGTAAAGGGCAAGGATGTGTTTGAGGCATTTTATAAGAAAGATCTTGCTAAAAGACTACTCTTAGGAAAGAGTGCTTCAATTGACGCGGAGAAATCCATGATCTCCAAGGTGAAGGCTCATTTTTCCATTTAACATTTTAAATAAATAGATGGTTCCTCAGCAGGTTTTTACTAACATGGCAATTTCCTTTCATCGATGCAGTTGAAGACTGAGTGTGGTAGCCAGTTCACAAACAAGCTGGAAGGAATGTTTAAGGTATGCATATCTTTGGATCAGTTTATAACTTTTGAGACATTTTTATTCAGCTTCTGGTTGGCATGCACTGGATTGAAATCATCTATACCAACCTCAGTTTTTTCCCATGTCTTTTTCTTTGGGAATTTTAACCTGGTTAGAGATTATATTTTATGGCCTTCGGTCACATTTAAGATTCAGCTGTGAATTTGAACTTGGATTTTGAATAATGAAGTTTTTCAGCCATATAAAATGTTGTTGCTATACAATTTATTTGCATTTATATAAAGAGGCGATAAACAATATTGGACATTGCTTTTAGAGAAGGAAAATTACTCTTCCCCCAGTGTAGACTTCTGTTCTGTATGTCTTTTAAAATCTATGACATAGCATCTTTATGCATCAACTATGAAATTGATTTACCCGACAGCCATCAAATGACCTTTCACTTGTATTTTGACAATGGTGAACACGTAGGAATTTGGCATTTTTTCTTGGATTGAAGTTCGTATATCATTTGCTTGGGTTTCATAGTCTTGTATAACTACTTTATGAATAACAATTGAAGTGACCCCACCCAATTAGTTAGTTGGGATCAGTTAGTTTTTGGATTCAGTTAGAAAGGTGGGACACAACACTGTATATATACTTAGGGTGAAGTAATAGAGGACAATTATGAGAGTTTCAGGAATAGTGTTTGGGAGGGAATCTAGGTCTCAAGTACTTAGAAGGTTGGAAATTACTATGCTGTAGATAGATACTAAAGGTGGTGTAATTGAGGACAATTATTAGAGTTTCAGGAACAGAGTTTGGGAGAGAGTCCAAGACTCAAGTACCTAGAAGGTTGGACATTAGTCTGCTGTGCTTGTATTTTGTTTTTACCCTCAGTGGTTGCATGGTACTCTATTGGTACCACCACATAGTTGGGAAGACTCATCAAAATTACATTCTTTTCTCTAATATTGTAATACTATAATGACAATAATCTAACAAACTTCATAAATTACTAAAACTTTTATTCATAGTTTTTTTTTTTTTTTTTATAATTATGTTTAAAATCATTTTGATACAGGACATCGAATTATCAAAAGAAATTAACGAATCCTTCAGACAGTCATCCCAGGCGAGAACAAAACTCCCATCAGGCATTGAAATGAGTGTTCATGTCTTGACAACAGGGTAAGCTATTTGTTTCCCTTTTCTTATCTATTGGCATCAGTAATGTAAACGGAGTCTTACAATAATTCTTTGATGAGTGCAGGTACTGGCCAACATATCCACCCATGGATGTCAGACTTCCTCATGAATTGAATGTTTACCAGGTTAAGCACAAGCCATAAATGAATGATCTTTTAACTGTTTGTAATTGAAATCCTTGATACTTCAAGTGACTTCCTTGACATGGTCCTTTCCTTTATTTCTTCAGGATATTTTTAAAGAGTTCTATCTGAGCAAATACAGTGGAAGGCGTCTCATGTGGCAAAATTCTTTAGGTCACTGTGTCCTAAAGGCAGATTTTCCCAAAGGGAAAAAGGAGTTGGCTGTCTCCCTATTTCAGGTTTGCCTTTCAAAAGCCATTATTATTTTTGTTATAGTTTCATTTGTTTATCTTGTATTGCACACATTTTTCTGAAATTAATACTGCATATCTGGCTTTGATCTAGACTGTTGTTTTGATGCAATTCAATGATGCTGAGAAACTAAGCTTTCAAGATATCAAGGATTCTACTGGTATCGAAGACAAGGAACTGAGAAGGACTCTGCAATCACTTGCATGTGGAAAAGTTCGTGTTCTACAAAAGGTTTGTTTGTATCTGTTTTTTAGAATTAATCAGTTCATAGAATTTGTTTTTAACAGTCTCCTTCAATTTCTTGATGTTGATTCCGTTTGTTGAACATGCAACAGATGCCAAAGGGTAGAGATGTGGAAGATTATGACTCGTTTGTTTTTAATGACACATTTACCGCCCCTCTTTACCGTATAAAGGTACAATACCCATTTCTTACTACTAAAGGGACTAGATTAACTGATTTCAAACTTTCATTTAAGTTTTAATTGTGATTACCATAGTTTAGCACTTCACAATGATTAGTGTTTGTAGTGGGTTACTCTAAAATTATGACTGAGGTTCTTTTTCAAACTCATTTCGGCGTTATGGAGTGCAGGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAATACAAACACCACAGAAAGAGTTTTCCAAGATCGTCAATATCAGGTTATTTTTCTTTTCTCAAAAGCTTCCTTCTAGTTTAGACTTCAGAAGACTAGTATACACAAGAATGCAATGCACCTTCAAATTCAAAAGAACCTACTTAGCATGGGGATTATACTCGTAACTTTTTAATGAATTATCAATCTTATACCGATTAGATTTATTTCACAAAGTATGTCAAATAATAAAATTAATGAGTGGATGTGTTATTGGAAATGAGATGTTAAGATGGATTAGTGGTCATACAAGACAATAGGATTAGAAATACTATTGTTGGCAAGAAATTTCATTAAGTTGTTATTATGTTAAATTTCATCGTTAAATCTTGTAATATATTTTTTTTTTTGAGGGAATCTTGTAATAGGGTTACATATGTTTATAATCCATCAAATTTTCTAAAATTTGGTGTTAGTTCCCCTTTTGAAAGTGATTTGCTTTCATCTCCCAAATTATTTTTGGTCCATTGAAATTCATTTTGCTACCCCCCTCCCCCTTTGATGTTTGCTTCAAGGACCACGAACAACATATTTTAAGTTTTTTGTTTTTGTTTTGAAGGAGCTATTTTTTAAGTTATGTACACAAAATTGGAAAGTATTATTATTGTAATGCAACCATCAAGGGTGCCTTGGTTGGACATCCTGTTATAAACAGTCAATATCATCCAATAATTTTTGTAGGTATCCAAAATGAGTTTTAAATGTCTATGTACTATGTAGTGACTGGTTGAAAAATATATATTTGTACTGAACATCTAATAATGATTATTCCTTCAAAAAAAAATCTAATAATGATTATGATCTATAACCTTTTCCTCGTGGCATGGTTTATATGCAGGTCGATGCTGCTATTGTGAGGATAATGAAAACTAGGAAAGTGCTTAGTCACACTCTTCTTATTACTGAACTCTTCCAACAGGTGACATCATTGCTACCTTTAGTTTCTTTAATGCAATTGTAGTCTCTGTGATCCCTAAGTAGTTCCATTACTTCCATATCAAAATAGCGTTGTCTGGTCTTCCGATGGTGTGATATTTATTATTGTTGCAAAGCTACTTTGCCGAGTTACTAGTGATGTCTGATAATGTTCTAAAATACGTTGTGCTGCAACCAAATCTCTACAGCGGCTGCACCTGTTCACTGTTGTCTGGCCTTCTAGCCGTTATGCTTTCTTGCTTGCACGTGAAAATTTCTGA
Protein sequence

>MS.gene96243.t1

MDNLVNIIGLNGLNLRIHGGTSLPVIGMSLSQQRLGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYASEGVKYMQQSDVPDYLKHVETRLQEEHERCLIYLDASTKKPLITTTEKQLLERHIPAILDKGFSMLMDGNRIEDLQRMHLLFSRVNALESLRQAISSYIRRTGQGIVMDEEKDKDMVQSLLEFKAALDTTWEESFAKNEAFSNTIKDAFEHLINLRQNRPAELIAKFLDDKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMQFNDAEKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDYDSFVFNDTFTAPLYRIKVNAIQLKETVEENTNTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQRLHLFTVVWPSSRYAFLLARENF