Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058427.t1 | RHN77073.1 | 88.9 | 1066 | 68 | 2 | 1 | 1017 | 1 | 1065 | 0.00E+00 | 1840.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058427.t1 | Q7Y219 | 37.1 | 1000 | 540 | 21 | 18 | 995 | 8 | 940 | 1.3e-145 | 518.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058427.t1 | A0A396JLD9 | 88.9 | 1066 | 68 | 2 | 1 | 1017 | 1 | 1065 | 0.0e+00 | 1840.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene058427 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene058427 | 0.819392 | 1.19E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene058427 | 0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene051543 | MS.gene058427 | 0.826358 | 2.83E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene058427 | 0.824389 | 8.29E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene058427 | 0.803108 | 4.08E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene058427 | 0.804395 | 2.21E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene058427 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene058427 | 0.833851 | 4.21E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene058427 | 0.802247 | 6.14E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene058427 | 0.827661 | 1.38E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene058427 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene058781 | 0.816592 | 5.11E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene058783 | 0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene058979 | 0.821759 | 3.40E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene060935 | 0.819039 | 1.43E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene060937 | 0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene062156 | 0.840732 | 7.28E-58 | -1.69E-46 |
| MS.gene058427 | MS.gene063209 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene063772 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene065666 | 0.812873 | 3.41E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene066320 | 0.802503 | 5.44E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene066321 | 0.807517 | 4.86E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene06643 | 0.811554 | 6.60E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene067173 | 0.840024 | 1.12E-57 | -1.69E-46 |
| MS.gene058427 | MS.gene06740 | 0.82714 | 1.84E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene067558 | 0.808035 | 3.77E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene068526 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene06857 | 0.818391 | 2.01E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene06927 | 0.80525 | 1.46E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene069519 | 0.811687 | 6.18E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene06958 | 0.828598 | 8.22E-55 | -1.69E-46 |
| MS.gene058427 | MS.gene070140 | 0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene070685 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene072019 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene072029 | 0.815701 | 8.08E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene072785 | 0.816565 | 5.18E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene07294 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene073008 | 0.818726 | 1.69E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene073016 | -0.813617 | 2.34E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene073132 | 0.816008 | 6.90E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene073139 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene073853 | 0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene07510 | 0.85062 | 1.51E-60 | -1.69E-46 |
| MS.gene058427 | MS.gene08813 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene09277 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene09600 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene20809 | 0.816519 | 5.31E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene21058 | 0.80171 | 7.92E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene21059 | 0.806324 | 8.69E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene21562 | 0.816272 | 6.02E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene22271 | 0.802194 | 6.30E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene22516 | 0.826058 | 3.34E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene22790 | 0.804283 | 2.33E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene22793 | 0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene24067 | 0.815629 | 8.38E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene24356 | 0.809832 | 1.56E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene25215 | 0.815777 | 7.77E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene25217 | 0.814716 | 1.34E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene25220 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene25269 | 0.803951 | 2.73E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene25978 | 0.809003 | 2.35E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene27997 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene30368 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene31904 | 0.824241 | 8.98E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene32579 | 0.806615 | 7.55E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene33135 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene33259 | 0.808486 | 3.03E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene33466 | 0.806081 | 9.78E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene34850 | 0.802469 | 5.53E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene35323 | 0.818514 | 1.88E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene35858 | 0.826224 | 3.05E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene36154 | 0.830534 | 2.78E-55 | -1.69E-46 |
| MS.gene058427 | MS.gene39037 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene39253 | 0.830292 | 3.19E-55 | -1.69E-46 |
| MS.gene058427 | MS.gene39793 | 0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene40068 | 0.827435 | 1.57E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene40079 | 0.824349 | 8.47E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene40157 | 0.837413 | 5.28E-57 | -1.69E-46 |
| MS.gene058427 | MS.gene40510 | 0.814434 | 1.54E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene40518 | 0.818611 | 1.79E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene41838 | 0.82217 | 2.73E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene43430 | 0.802921 | 4.46E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene43447 | 0.806224 | 9.13E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene44179 | 0.822871 | 1.88E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene44434 | 0.808393 | 3.17E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene44621 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene44750 | 0.803701 | 3.07E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene45613 | 0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene45641 | 0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene47707 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene47967 | 0.806914 | 6.53E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene49320 | 0.809903 | 1.50E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene50639 | 0.808097 | 3.66E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene50848 | 0.815685 | 8.15E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene51788 | 0.810207 | 1.29E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene51789 | 0.817269 | 3.60E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene56421 | 0.84483 | 5.93E-59 | -1.69E-46 |
| MS.gene058427 | MS.gene57360 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene58278 | 0.817206 | 3.72E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene59436 | 0.810462 | 1.14E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene60171 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene60566 | 0.808959 | 2.40E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene60827 | 0.81441 | 1.56E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene60935 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene61202 | 0.82039 | 7.03E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene61228 | 0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene63793 | 0.8127 | 3.72E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene64284 | 0.817975 | 2.50E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene64772 | 0.809121 | 2.21E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene65291 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene66544 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene66962 | 0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene67007 | 0.81525 | 1.02E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene67388 | 0.810432 | 1.16E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene67662 | 0.845779 | 3.28E-59 | -1.69E-46 |
| MS.gene058427 | MS.gene68204 | 0.8062 | 9.23E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene71597 | 0.812553 | 4.00E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene71705 | 0.8075 | 4.90E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene71945 | 0.816058 | 6.73E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene73498 | 0.816126 | 6.50E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene73513 | 0.81266 | 3.79E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene74902 | 0.80001 | 1.76E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene74904 | 0.826216 | 3.06E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene75587 | 0.812627 | 3.86E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene76005 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene76244 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene76374 | 0.806233 | 9.09E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene77356 | 0.846952 | 1.57E-59 | -1.69E-46 |
| MS.gene058427 | MS.gene78084 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene79285 | 0.818672 | 1.73E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene80094 | 0.811666 | 6.25E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene82806 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene83624 | 0.810911 | 9.11E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene84186 | 0.821448 | 4.02E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene84995 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene85650 | 0.814877 | 1.23E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene85936 | 0.808555 | 2.92E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene86140 | 0.811289 | 7.54E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene86267 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene86826 | 0.83646 | 9.24E-57 | -1.69E-46 |
| MS.gene058427 | MS.gene89104 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene90525 | 0.808913 | 2.45E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene90585 | 0.832813 | 7.63E-56 | -1.69E-46 |
| MS.gene058427 | MS.gene90604 | 0.824662 | 7.15E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene91416 | 0.803788 | 2.95E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene92320 | 0.822806 | 1.95E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene92981 | 0.840126 | 1.05E-57 | -1.69E-46 |
| MS.gene058427 | MS.gene93025 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene95096 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene96073 | 0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene96191 | 0.841505 | 4.56E-58 | -1.69E-46 |
| MS.gene058427 | MS.gene96242 | 0.810846 | 9.41E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene96243 | 0.801254 | 9.82E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene97030 | 0.80866 | 2.78E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058427.t1 | MTR_1g015120 | 87.430 | 1066 | 61 | 3 | 1 | 1017 | 1 | 1042 | 0.0 | 1861 |
| MS.gene058427.t1 | MTR_4g125670 | 34.995 | 1103 | 566 | 23 | 24 | 1016 | 9 | 1070 | 3.89e-169 | 524 |
| MS.gene058427.t1 | MTR_2g040970 | 34.136 | 1204 | 587 | 33 | 2 | 1016 | 1 | 1187 | 1.60e-168 | 526 |
| MS.gene058427.t1 | MTR_2g040970 | 34.136 | 1204 | 587 | 33 | 2 | 1016 | 1 | 1187 | 5.03e-168 | 527 |
| MS.gene058427.t1 | MTR_6g080430 | 38.835 | 206 | 121 | 3 | 44 | 246 | 78 | 281 | 3.76e-34 | 142 |
| MS.gene058427.t1 | MTR_6g080430 | 26.730 | 419 | 218 | 12 | 618 | 1013 | 514 | 866 | 2.57e-27 | 120 |
| MS.gene058427.t1 | MTR_8g106680 | 36.782 | 174 | 104 | 3 | 76 | 246 | 105 | 275 | 9.07e-27 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058427.t1 | AT5G26160 | 37.438 | 1007 | 527 | 24 | 18 | 995 | 8 | 940 | 6.42e-171 | 526 |
| MS.gene058427.t1 | AT5G26160 | 37.438 | 1007 | 527 | 24 | 18 | 995 | 8 | 940 | 1.00e-170 | 525 |
| MS.gene058427.t1 | AT5G26160 | 37.438 | 1007 | 527 | 24 | 18 | 995 | 8 | 940 | 1.00e-170 | 525 |
| MS.gene058427.t1 | AT5G20610 | 35.692 | 636 | 312 | 16 | 464 | 1017 | 544 | 1164 | 3.81e-93 | 322 |
| MS.gene058427.t1 | AT5G20610 | 39.748 | 317 | 154 | 6 | 26 | 320 | 13 | 314 | 1.57e-56 | 213 |
| MS.gene058427.t1 | AT1G42550 | 37.725 | 167 | 98 | 4 | 85 | 246 | 123 | 288 | 3.14e-26 | 116 |
| MS.gene058427.t1 | AT1G42550 | 25.478 | 314 | 156 | 12 | 552 | 826 | 458 | 732 | 2.24e-12 | 72.0 |
Find 197 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAGATCTTCAAGAATTT+TGG | 0.094286 | 1.4:+6873260 | None:intergenic |
| TCTGATTTATCTTTAATTAT+TGG | 0.172054 | 1.4:-6873339 | MS.gene058427:CDS |
| TGGCAGAAAGCGCAGTTATT+TGG | 0.193805 | 1.4:-6872273 | MS.gene058427:CDS |
| GTACATAGATGTTCGGTTTA+TGG | 0.206716 | 1.4:-6874509 | MS.gene058427:CDS |
| GAGATGGTAGAAGGCTTAAA+AGG | 0.248939 | 1.4:+6874839 | None:intergenic |
| AATCTGTCTTCAAGTTAATA+AGG | 0.251956 | 1.4:+6874195 | None:intergenic |
| CATCCAAGGAGAACATAATT+TGG | 0.267826 | 1.4:-6872390 | MS.gene058427:CDS |
| CACTTAAGTAGTGTTCTTCT+TGG | 0.277300 | 1.4:+6873634 | None:intergenic |
| ACTGAAACTGATTCAAATAT+TGG | 0.283455 | 1.4:-6874923 | MS.gene058427:CDS |
| CACTTTGGGAACATGATATC+AGG | 0.285981 | 1.4:+6871795 | None:intergenic |
| ATCCGACACAATATGCTTAA+TGG | 0.290782 | 1.4:+6872861 | None:intergenic |
| AGAACCTGGTCTGGTGGATT+TGG | 0.298861 | 1.4:-6873180 | MS.gene058427:CDS |
| TTCACCAATCGAAGGTAATA+TGG | 0.301986 | 1.4:+6873125 | None:intergenic |
| TGATTTATGCTTCTGTTGTT+GGG | 0.305019 | 1.4:-6874436 | MS.gene058427:CDS |
| TTGTGCGAGCCTCATCATTC+AGG | 0.308272 | 1.4:-6873022 | MS.gene058427:CDS |
| TGGTGGTAACCGACAAGTTT+GGG | 0.310784 | 1.4:-6872021 | MS.gene058427:CDS |
| AGGTTGGTTGGAAAAGCTTT+AGG | 0.311083 | 1.4:-6874302 | MS.gene058427:CDS |
| TTGATTTATGCTTCTGTTGT+TGG | 0.316516 | 1.4:-6874437 | MS.gene058427:CDS |
| CACCGAGTTTAGAAGAGTTA+TGG | 0.322033 | 1.4:-6874361 | MS.gene058427:CDS |
| TAATGTGGATGAGATTATTA+AGG | 0.327179 | 1.4:-6873832 | MS.gene058427:CDS |
| ACTGGTTCATAATTTCTTAG+AGG | 0.327756 | 1.4:+6872209 | None:intergenic |
| GGCAGAAAGCGCAGTTATTT+GGG | 0.332530 | 1.4:-6872272 | MS.gene058427:CDS |
| ACAAGAAATTGTCTTCAAAA+TGG | 0.335837 | 1.4:-6874739 | MS.gene058427:CDS |
| CACTGGATACCGTATGTTCT+AGG | 0.342638 | 1.4:-6873770 | MS.gene058427:CDS |
| AAGACTAACAAGGAAGCTTC+TGG | 0.343748 | 1.4:-6872835 | MS.gene058427:CDS |
| AATTGTCTTCAAAATGGAAT+TGG | 0.344941 | 1.4:-6874733 | MS.gene058427:CDS |
| TGTTTCCCAATGTCATGTTC+AGG | 0.348192 | 1.4:+6874410 | None:intergenic |
| GTAAGTGAGGATCTGTTGAT+AGG | 0.349589 | 1.4:-6874764 | MS.gene058427:CDS |
| TTATGGGGTGATAAAAGTTC+AGG | 0.358120 | 1.4:-6874344 | MS.gene058427:CDS |
| AAGGATGATTTAATGAGATT+TGG | 0.360201 | 1.4:-6874242 | MS.gene058427:CDS |
| GCTCTGACATTGTTCACTTT+GGG | 0.360351 | 1.4:+6871781 | None:intergenic |
| TGCTCTGACATTGTTCACTT+TGG | 0.361069 | 1.4:+6871780 | None:intergenic |
| ACCAGTTGGAGTTCCAATAC+TGG | 0.365800 | 1.4:-6872192 | MS.gene058427:CDS |
| AATCCACCAGACCAGGTTCT+TGG | 0.366360 | 1.4:+6873183 | None:intergenic |
| TCTTCATCGGATATTTCAAT+TGG | 0.366592 | 1.4:+6873153 | None:intergenic |
| TGAGATTTGGTGCTAGTAAT+GGG | 0.369936 | 1.4:-6874229 | MS.gene058427:CDS |
| CGACGATCTTGATGGTTTGA+TGG | 0.371384 | 1.4:-6872459 | MS.gene058427:CDS |
| CTTCATGTTCATTCGATTGA+GGG | 0.378234 | 1.4:-6874650 | MS.gene058427:CDS |
| AATATTTGTTAAAACTTTCA+AGG | 0.378277 | 1.4:+6874703 | None:intergenic |
| ACCGAGTTTAGAAGAGTTAT+GGG | 0.379141 | 1.4:-6874360 | MS.gene058427:CDS |
| AATGAAGCAGTGATGAATTC+TGG | 0.379585 | 1.4:-6874083 | MS.gene058427:CDS |
| AACTGAATCCTCAATCTTCA+TGG | 0.382045 | 1.4:+6873680 | None:intergenic |
| AATGCGAATGAGGAGGGATT+GGG | 0.384507 | 1.4:-6873405 | MS.gene058427:CDS |
| GAAAATGAGGCTCTAGCTTC+AGG | 0.387737 | 1.4:-6873447 | MS.gene058427:CDS |
| CAATGGTTGAGACTTGATTC+TGG | 0.388547 | 1.4:-6872416 | MS.gene058427:CDS |
| CCTTCGATTGGTGAAGGGCT+TGG | 0.388984 | 1.4:-6873117 | MS.gene058427:CDS |
| ATCAAGGAGATTCATCTTGC+CGG | 0.392859 | 1.4:-6872062 | MS.gene058427:CDS |
| AAGAGTTGACATAAATGAAA+TGG | 0.402011 | 1.4:-6872153 | MS.gene058427:CDS |
| GTGATAAAAGTTCAGGGAAA+TGG | 0.403771 | 1.4:-6874337 | MS.gene058427:CDS |
| TCAATCTTGTTAATAGTCAT+AGG | 0.404954 | 1.4:+6872563 | None:intergenic |
| TATAATGATGGGTTGGGAAA+TGG | 0.405336 | 1.4:-6872317 | MS.gene058427:CDS |
| GTGGTGGTAACCGACAAGTT+TGG | 0.405523 | 1.4:-6872022 | MS.gene058427:CDS |
| ACCAGTATTGGAACTCCAAC+TGG | 0.408338 | 1.4:+6872191 | None:intergenic |
| TATGGTGGTCGCGTCGTGTC+TGG | 0.409194 | 1.4:-6874491 | MS.gene058427:CDS |
| CTTTGAGTTTCAATGGCGTT+AGG | 0.410372 | 1.4:-6874622 | MS.gene058427:CDS |
| GCTAGATTAAATGTTAGTTT+CGG | 0.410989 | 1.4:-6874278 | MS.gene058427:CDS |
| GAACCGTCCAATACCCTTGA+TGG | 0.412288 | 1.4:+6874554 | None:intergenic |
| ACTGCGTCTCAGCAACAATC+CGG | 0.412720 | 1.4:-6871996 | MS.gene058427:CDS |
| TTTAAGACAGTTTGAAAATG+AGG | 0.413809 | 1.4:-6873460 | MS.gene058427:CDS |
| TGATAAATTAATGCAACAAT+GGG | 0.414227 | 1.4:-6873235 | MS.gene058427:CDS |
| ATCTTGATTCAACAATTTGT+TGG | 0.416147 | 1.4:+6871878 | None:intergenic |
| ATCACAGAATTATATAATGA+TGG | 0.420774 | 1.4:-6872329 | MS.gene058427:CDS |
| ATTAAGCAAAGCTCTTTACT+TGG | 0.426857 | 1.4:-6874870 | MS.gene058427:CDS |
| TAATGCGAATGAGGAGGGAT+TGG | 0.434699 | 1.4:-6873406 | MS.gene058427:CDS |
| AACTTTGGTACATAGATGTT+CGG | 0.436998 | 1.4:-6874516 | MS.gene058427:CDS |
| GGTTAAGTGTGCATTGGAAA+AGG | 0.437103 | 1.4:-6874601 | MS.gene058427:CDS |
| CTAAAACAAGCAACATTGTC+GGG | 0.437682 | 1.4:+6874164 | None:intergenic |
| GTTCCAAATTATGTTCTCCT+TGG | 0.441194 | 1.4:+6872387 | None:intergenic |
| TTCTTAGAGGATCTCTGTGC+TGG | 0.444411 | 1.4:+6872222 | None:intergenic |
| ATGAGATTTGGTGCTAGTAA+TGG | 0.445911 | 1.4:-6874230 | MS.gene058427:CDS |
| GGACTTCCTTTGAGTTTCAA+TGG | 0.449191 | 1.4:-6874629 | MS.gene058427:CDS |
| TTCTACCCCTTGTTCACTGA+TGG | 0.449718 | 1.4:+6873929 | None:intergenic |
| TCGTTCGAATTTGATCAAAC+AGG | 0.452174 | 1.4:-6873891 | MS.gene058427:CDS |
| GACTTGCCCATCAAGGGTAT+TGG | 0.456422 | 1.4:-6874561 | MS.gene058427:CDS |
| GAAATCAACGACGATCTTGA+TGG | 0.458924 | 1.4:-6872467 | MS.gene058427:CDS |
| ACTGATAAGGTGAAAATAGA+TGG | 0.459395 | 1.4:-6872293 | MS.gene058427:CDS |
| TAGAGACTAATGCACACATT+AGG | 0.459516 | 1.4:-6871821 | MS.gene058427:CDS |
| TAGGAATGTGAATGTGGATA+TGG | 0.460785 | 1.4:-6873751 | MS.gene058427:CDS |
| TCTGTTTCAGGAAGGGATCA+TGG | 0.464848 | 1.4:-6872673 | MS.gene058427:intron |
| TCTTCATGTTCATTCGATTG+AGG | 0.468038 | 1.4:-6874651 | MS.gene058427:CDS |
| AATTCTCCAAGAACCTGGTC+TGG | 0.470655 | 1.4:-6873189 | MS.gene058427:CDS |
| GAATTATATAATGATGGGTT+GGG | 0.472771 | 1.4:-6872323 | MS.gene058427:CDS |
| TTTCTTAAAGACGCTGGCAT+TGG | 0.474864 | 1.4:-6873541 | MS.gene058427:CDS |
| AGATCCTCACTTACAAATCT+CGG | 0.474977 | 1.4:+6874773 | None:intergenic |
| TTTCGGTTATCAAGTAATGA+AGG | 0.475758 | 1.4:-6874261 | MS.gene058427:CDS |
| AGAATTATATAATGATGGGT+TGG | 0.478189 | 1.4:-6872324 | MS.gene058427:CDS |
| TGCGGAGTTTGATGAAACTT+TGG | 0.478584 | 1.4:-6874531 | MS.gene058427:CDS |
| TGTCAGTAACGTTGGATCAA+TGG | 0.480802 | 1.4:-6872433 | MS.gene058427:CDS |
| GCCTGAGCTAAAACCAGTAT+TGG | 0.481373 | 1.4:+6872179 | None:intergenic |
| TAAGTGAGGATCTGTTGATA+GGG | 0.484135 | 1.4:-6874763 | MS.gene058427:CDS |
| TTGAAAATTCTCCAAGAACC+TGG | 0.492352 | 1.4:-6873194 | MS.gene058427:CDS |
| AATTATTGGTGCCGCGGAAG+AGG | 0.495603 | 1.4:-6873325 | MS.gene058427:CDS |
| CTGATAAATTAATGCAACAA+TGG | 0.498084 | 1.4:-6873236 | MS.gene058427:CDS |
| GATTTATGCTTCTGTTGTTG+GGG | 0.498131 | 1.4:-6874435 | MS.gene058427:CDS |
| GATCCTCACTTACAAATCTC+GGG | 0.499409 | 1.4:+6874774 | None:intergenic |
| AGCATAAATCAAGAATCGCT+TGG | 0.502217 | 1.4:+6874448 | None:intergenic |
| AGATGGTAGAAGGCTTAAAA+GGG | 0.502789 | 1.4:+6874840 | None:intergenic |
| TCAATCTAGATTCAAAATCA+AGG | 0.504472 | 1.4:-6872078 | MS.gene058427:CDS |
| GGGAACCTGAACATGACATT+GGG | 0.508776 | 1.4:-6874415 | MS.gene058427:CDS |
| AACAATGGGGTTTAGATGAG+AGG | 0.511115 | 1.4:-6873221 | MS.gene058427:CDS |
| GTCAAGAAACTCTGACGTCT+CGG | 0.513109 | 1.4:+6873656 | None:intergenic |
| TAATTCAGCACGGGCAGACT+CGG | 0.515926 | 1.4:-6874000 | MS.gene058427:CDS |
| CCCCATAACTCTTCTAAACT+CGG | 0.519304 | 1.4:+6874359 | None:intergenic |
| ATCAATCATTAATGCAGAGA+AGG | 0.520043 | 1.4:-6873287 | MS.gene058427:CDS |
| ATATTTGTTAAAACTTTCAA+GGG | 0.523046 | 1.4:+6874704 | None:intergenic |
| ACGCAGTGCCCCAAACTTGT+CGG | 0.527140 | 1.4:+6872012 | None:intergenic |
| ATGCCTTTGCTAGATATCAC+TGG | 0.527711 | 1.4:-6872889 | MS.gene058427:CDS |
| GTTGGGAAATGGCACTGATA+AGG | 0.529156 | 1.4:-6872306 | MS.gene058427:CDS |
| AGCAACAATCCGGGTTGCGT+TGG | 0.533759 | 1.4:-6871986 | MS.gene058427:CDS |
| TTATCTGTTAAATAACTACA+TGG | 0.535658 | 1.4:+6872626 | None:intergenic |
| ATAGGGATGTCGTAAAGCTT+CGG | 0.535896 | 1.4:-6874133 | MS.gene058427:CDS |
| GACAGTATTACACATGCCAC+TGG | 0.538186 | 1.4:+6871956 | None:intergenic |
| TCACAGAATTATATAATGAT+GGG | 0.538575 | 1.4:-6872328 | MS.gene058427:CDS |
| ATATTACCTTCGATTGGTGA+AGG | 0.538823 | 1.4:-6873123 | MS.gene058427:CDS |
| ACATGACATTGGGAAACATC+AGG | 0.539471 | 1.4:-6874405 | MS.gene058427:CDS |
| ACTTCCAAATCCACCAGACC+AGG | 0.539639 | 1.4:+6873176 | None:intergenic |
| GCAGTGATGAATTCTGGCTC+AGG | 0.540966 | 1.4:-6874077 | MS.gene058427:CDS |
| TAACGCAAGATGTGATTCAC+TGG | 0.542746 | 1.4:-6873787 | MS.gene058427:CDS |
| CTAAGAAATTATGAACCAGT+TGG | 0.543091 | 1.4:-6872206 | MS.gene058427:CDS |
| TGTCTTAAAAGCTTCTCTCT+AGG | 0.544252 | 1.4:+6873474 | None:intergenic |
| TCTACCATCCATGAAGATTG+AGG | 0.546459 | 1.4:-6873688 | MS.gene058427:CDS |
| TGTTGAATCAAGATATCTTG+TGG | 0.547330 | 1.4:-6871869 | MS.gene058427:CDS |
| GATGGATCTGTCAGTAACGT+TGG | 0.547375 | 1.4:-6872441 | MS.gene058427:CDS |
| TCATTTCGCTCAAGCTGTGA+CGG | 0.549382 | 1.4:-6873510 | MS.gene058427:CDS |
| TCTCCAAGAACCTGGTCTGG+TGG | 0.549400 | 1.4:-6873186 | MS.gene058427:CDS |
| ACTAAAACAAGCAACATTGT+CGG | 0.549458 | 1.4:+6874163 | None:intergenic |
| TACACTTGAACATAACTATG+AGG | 0.551566 | 1.4:-6873376 | MS.gene058427:CDS |
| AAGCTTCTCTCTAGGAGACA+TGG | 0.552937 | 1.4:+6873482 | None:intergenic |
| ATTCTTAGCATTTCTGAAGA+GGG | 0.553950 | 1.4:+6873044 | None:intergenic |
| GTCTAGCATGTCAAATGAAG+AGG | 0.553980 | 1.4:-6872510 | MS.gene058427:CDS |
| GCGTTAGGTTAAGTGTGCAT+TGG | 0.554281 | 1.4:-6874607 | MS.gene058427:CDS |
| TTGCGTTGGTTGCTTTCCAG+TGG | 0.555258 | 1.4:-6871972 | MS.gene058427:CDS |
| CCTATATCAAAAGCTTGATG+AGG | 0.555755 | 1.4:-6874033 | MS.gene058427:CDS |
| CTATATCAAAAGCTTGATGA+GGG | 0.556939 | 1.4:-6874032 | MS.gene058427:CDS |
| CTTGATTCTGGCATCATCCA+AGG | 0.557881 | 1.4:-6872404 | MS.gene058427:CDS |
| AATTCTTAGCATTTCTGAAG+AGG | 0.558323 | 1.4:+6873043 | None:intergenic |
| TTAGCATTTCTGAAGAGGGA+AGG | 0.560033 | 1.4:+6873048 | None:intergenic |
| TAATATGGACGGTTCTTCAT+CGG | 0.561202 | 1.4:+6873140 | None:intergenic |
| CCGCGGAAGAGGAGTATGAA+AGG | 0.563504 | 1.4:-6873314 | MS.gene058427:CDS |
| CGCGGAAGAGGAGTATGAAA+GGG | 0.564447 | 1.4:-6873313 | MS.gene058427:CDS |
| CTGCGTCTCAGCAACAATCC+GGG | 0.564997 | 1.4:-6871995 | MS.gene058427:CDS |
| CACATTAATGATTTCAACTG+TGG | 0.565922 | 1.4:+6873848 | None:intergenic |
| ATCTTTAATTATTGGTGCCG+CGG | 0.568539 | 1.4:-6873331 | MS.gene058427:CDS |
| AGCTTCTCTCTAGGAGACAT+GGG | 0.568860 | 1.4:+6873483 | None:intergenic |
| TTTGCAGACTTGCCCATCAA+GGG | 0.571889 | 1.4:-6874567 | MS.gene058427:CDS |
| TATTACCTTCGATTGGTGAA+GGG | 0.575420 | 1.4:-6873122 | MS.gene058427:CDS |
| ATTCACATTCCTAGAACATA+CGG | 0.576528 | 1.4:+6873761 | None:intergenic |
| GGGGAACCTGAACATGACAT+TGG | 0.579850 | 1.4:-6874416 | MS.gene058427:CDS |
| TATGGGGTGATAAAAGTTCA+GGG | 0.580001 | 1.4:-6874343 | MS.gene058427:CDS |
| AACCGTCCAATACCCTTGAT+GGG | 0.583938 | 1.4:+6874555 | None:intergenic |
| ATCATTAATGCAGAGAAGGA+AGG | 0.585207 | 1.4:-6873283 | MS.gene058427:CDS |
| CCGTCCATATTACCTTCGAT+TGG | 0.585444 | 1.4:-6873129 | MS.gene058427:CDS |
| ATCCATTAAGCATATTGTGT+CGG | 0.586015 | 1.4:-6872863 | MS.gene058427:CDS |
| TCTGAAGAGGGAAGGACACA+TGG | 0.586443 | 1.4:+6873056 | None:intergenic |
| ATGCGAATGAGGAGGGATTG+GGG | 0.589104 | 1.4:-6873404 | MS.gene058427:CDS |
| ATTGGATATACTTCTGTACA+TGG | 0.591836 | 1.4:-6872956 | MS.gene058427:CDS |
| CTAACGCCATTGAAACTCAA+AGG | 0.592925 | 1.4:+6874623 | None:intergenic |
| GGAAAGCAACCAACGCAACC+CGG | 0.594488 | 1.4:+6871977 | None:intergenic |
| GAATCCTCAATCTTCATGGA+TGG | 0.594679 | 1.4:+6873684 | None:intergenic |
| ATTTCTCCACGAATGCATGA+TGG | 0.595591 | 1.4:+6872485 | None:intergenic |
| AGGGGTAGAAACATCTGAAG+AGG | 0.598445 | 1.4:-6873916 | MS.gene058427:CDS |
| CATAGATGTTCGGTTTATGG+TGG | 0.601478 | 1.4:-6874506 | MS.gene058427:CDS |
| GAACTTCAATAATTCAGCAC+GGG | 0.606552 | 1.4:-6874009 | MS.gene058427:CDS |
| GAGGCACCATCATGCATTCG+TGG | 0.607479 | 1.4:-6872491 | MS.gene058427:CDS |
| ACAATGGGGTTTAGATGAGA+GGG | 0.609250 | 1.4:-6873220 | MS.gene058427:CDS |
| AAGGGTATTGGACGGTTCTG+CGG | 0.613657 | 1.4:-6874549 | MS.gene058427:CDS |
| CACAGTTGAAATCATTAATG+TGG | 0.613849 | 1.4:-6873847 | MS.gene058427:CDS |
| GAGTCTGAAAATAAAGATGT+TGG | 0.617219 | 1.4:-6874950 | MS.gene058427:CDS |
| TGCCCATCAAGGGTATTGGA+CGG | 0.622258 | 1.4:-6874557 | MS.gene058427:CDS |
| GATTAGAAGCCTGAATGATG+AGG | 0.627712 | 1.4:+6873013 | None:intergenic |
| ATGACATCATCCAAGCTATG+TGG | 0.628164 | 1.4:+6873582 | None:intergenic |
| GCAGACTCGGAGTCATCTCA+AGG | 0.629555 | 1.4:-6873987 | MS.gene058427:CDS |
| CTAACAAGGAAGCTTCTGGA+AGG | 0.630482 | 1.4:-6872831 | MS.gene058427:intron |
| CCAAGCCCTTCACCAATCGA+AGG | 0.641764 | 1.4:+6873117 | None:intergenic |
| GAGTGATTTCTTAAAGACGC+TGG | 0.643107 | 1.4:-6873547 | MS.gene058427:CDS |
| TTTCCAGTGATATCTAGCAA+AGG | 0.643248 | 1.4:+6872886 | None:intergenic |
| GGAACTTCAATAATTCAGCA+CGG | 0.650508 | 1.4:-6874010 | MS.gene058427:CDS |
| CCAATCGAAGGTAATATGGA+CGG | 0.651476 | 1.4:+6873129 | None:intergenic |
| TCGTTTGTTCAAACTACGAG+CGG | 0.651591 | 1.4:-6873093 | MS.gene058427:CDS |
| TTTGTTCAAACTACGAGCGG+AGG | 0.651959 | 1.4:-6873090 | MS.gene058427:CDS |
| AAGTGAGGATCTGTTGATAG+GGG | 0.655616 | 1.4:-6874762 | MS.gene058427:CDS |
| AACACCACGTCATTCTGAGT+CGG | 0.655925 | 1.4:+6874110 | None:intergenic |
| CCTTTCATACTCCTCTTCCG+CGG | 0.659309 | 1.4:+6873314 | None:intergenic |
| AACATCAGGTTGATCTCACT+AGG | 0.663911 | 1.4:-6874391 | MS.gene058427:CDS |
| ATGTTCTAGGAATGTGAATG+TGG | 0.669689 | 1.4:-6873757 | MS.gene058427:CDS |
| GATGGTAGAAGGCTTAAAAG+GGG | 0.670150 | 1.4:+6874841 | None:intergenic |
| AAACCCGAGATTTGTAAGTG+AGG | 0.672556 | 1.4:-6874777 | MS.gene058427:CDS |
| TTTGGGAGAGCACATAACAG+TGG | 0.673391 | 1.4:-6872255 | MS.gene058427:CDS |
| CCGAGTTTAGAAGAGTTATG+GGG | 0.678831 | 1.4:-6874359 | MS.gene058427:CDS |
| GGTGGTAACCGACAAGTTTG+GGG | 0.679356 | 1.4:-6872020 | MS.gene058427:CDS |
| TAAAACAAGCAACATTGTCG+GGG | 0.684076 | 1.4:+6874165 | None:intergenic |
| TATATCAAAAGCTTGATGAG+GGG | 0.686474 | 1.4:-6874031 | MS.gene058427:CDS |
| GATAAATTAATGCAACAATG+GGG | 0.695430 | 1.4:-6873234 | MS.gene058427:CDS |
| GTCGGATGCTAAGACTAACA+AGG | 0.709457 | 1.4:-6872845 | MS.gene058427:CDS |
| TAACTATGAGGATTATGACG+TGG | 0.723957 | 1.4:-6873364 | MS.gene058427:CDS |
| CATAACTCTTCTAAACTCGG+TGG | 0.734783 | 1.4:+6874362 | None:intergenic |
| TCGGCCGACTCAGAATGACG+TGG | 0.772807 | 1.4:-6874114 | MS.gene058427:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTGATTTATCTTTAATTAT+TGG | - | chr1.4:6873426-6873445 | MS.gene058427:CDS | 15.0% |
| !!! | AATATTTGTTAAAACTTTCA+AGG | + | chr1.4:6872065-6872084 | None:intergenic | 15.0% |
| !!! | ATATTTGTTAAAACTTTCAA+GGG | + | chr1.4:6872064-6872083 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTTTAACAAATAT+TGG | - | chr1.4:6872064-6872083 | MS.gene058427:CDS | 15.0% |
| !! | AAAAATAGGTAACGATATAT+TGG | - | chr1.4:6873791-6873810 | MS.gene058427:CDS | 20.0% |
| !! | ATCACAGAATTATATAATGA+TGG | - | chr1.4:6874436-6874455 | MS.gene058427:CDS | 20.0% |
| !! | TCACAGAATTATATAATGAT+GGG | - | chr1.4:6874437-6874456 | MS.gene058427:CDS | 20.0% |
| !! | TGATAAATTAATGCAACAAT+GGG | - | chr1.4:6873530-6873549 | MS.gene058427:CDS | 20.0% |
| !! | TTATCTGTTAAATAACTACA+TGG | + | chr1.4:6874142-6874161 | None:intergenic | 20.0% |
| !!! | ATTGAATCTCTTTTAATAGA+AGG | - | chr1.4:6874220-6874239 | MS.gene058427:CDS | 20.0% |
| !!! | TTGAATCTCTTTTAATAGAA+GGG | - | chr1.4:6874221-6874240 | MS.gene058427:CDS | 20.0% |
| !!! | TTGTTTTAGTTCTAACAATA+GGG | - | chr1.4:6872615-6872634 | MS.gene058427:CDS | 20.0% |
| ! | AAGAGTTGACATAAATGAAA+TGG | - | chr1.4:6874612-6874631 | MS.gene058427:CDS | 25.0% |
| ! | AAGGATGATTTAATGAGATT+TGG | - | chr1.4:6872523-6872542 | MS.gene058427:CDS | 25.0% |
| ! | AATTGTCTTCAAAATGGAAT+TGG | - | chr1.4:6872032-6872051 | MS.gene058427:CDS | 25.0% |
| ! | ACAAGAAATTGTCTTCAAAA+TGG | - | chr1.4:6872026-6872045 | MS.gene058427:CDS | 25.0% |
| ! | ACAGAAATAAATCAAATGCT+TGG | + | chr1.4:6874051-6874070 | None:intergenic | 25.0% |
| ! | ATCTTGATTCAACAATTTGT+TGG | + | chr1.4:6874890-6874909 | None:intergenic | 25.0% |
| ! | CTGATAAATTAATGCAACAA+TGG | - | chr1.4:6873529-6873548 | MS.gene058427:CDS | 25.0% |
| ! | GATAAATTAATGCAACAATG+GGG | - | chr1.4:6873531-6873550 | MS.gene058427:CDS | 25.0% |
| ! | TAATGTGGATGAGATTATTA+AGG | - | chr1.4:6872933-6872952 | MS.gene058427:CDS | 25.0% |
| ! | TCAAATGCTTGGAATAAAAA+AGG | + | chr1.4:6874040-6874059 | None:intergenic | 25.0% |
| ! | TCAATCTAGATTCAAAATCA+AGG | - | chr1.4:6874687-6874706 | MS.gene058427:CDS | 25.0% |
| ! | TCAATCTTGTTAATAGTCAT+AGG | + | chr1.4:6874205-6874224 | None:intergenic | 25.0% |
| !! | AATCTGTCTTCAAGTTAATA+AGG | + | chr1.4:6872573-6872592 | None:intergenic | 25.0% |
| !! | ACTGAAACTGATTCAAATAT+TGG | - | chr1.4:6871842-6871861 | MS.gene058427:CDS | 25.0% |
| !! | GCTAGATTAAATGTTAGTTT+CGG | - | chr1.4:6872487-6872506 | MS.gene058427:CDS | 25.0% |
| !! | TTATTTTCAGACTCAAAGTT+TGG | + | chr1.4:6871809-6871828 | None:intergenic | 25.0% |
| !! | TTGATTTTGAATCTAGATTG+AGG | + | chr1.4:6874688-6874707 | None:intergenic | 25.0% |
| !! | TTTAAGACAGTTTGAAAATG+AGG | - | chr1.4:6873305-6873324 | MS.gene058427:CDS | 25.0% |
| !!! | AGAATTATATAATGATGGGT+TGG | - | chr1.4:6874441-6874460 | MS.gene058427:CDS | 25.0% |
| !!! | CTTGTTTTAGTTCTAACAAT+AGG | - | chr1.4:6872614-6872633 | MS.gene058427:CDS | 25.0% |
| !!! | GAATTATATAATGATGGGTT+GGG | - | chr1.4:6874442-6874461 | MS.gene058427:CDS | 25.0% |
| !!! | TAAGTTGAGATTTTGACAAA+CGG | + | chr1.4:6871964-6871983 | None:intergenic | 25.0% |
| !!! | TTTTGATTTTAATGCGAATG+AGG | - | chr1.4:6873350-6873369 | MS.gene058427:CDS | 25.0% |
| AACTTTGGTACATAGATGTT+CGG | - | chr1.4:6872249-6872268 | MS.gene058427:CDS | 30.0% | |
| ACTAAAACAAGCAACATTGT+CGG | + | chr1.4:6872605-6872624 | None:intergenic | 30.0% | |
| ACTGATAAGGTGAAAATAGA+TGG | - | chr1.4:6874472-6874491 | MS.gene058427:CDS | 30.0% | |
| ATCAATCATTAATGCAGAGA+AGG | - | chr1.4:6873478-6873497 | MS.gene058427:CDS | 30.0% | |
| ATCCATTAAGCATATTGTGT+CGG | - | chr1.4:6873902-6873921 | MS.gene058427:CDS | 30.0% | |
| ATTAAGCAAAGCTCTTTACT+TGG | - | chr1.4:6871895-6871914 | MS.gene058427:CDS | 30.0% | |
| ATTCACATTCCTAGAACATA+CGG | + | chr1.4:6873007-6873026 | None:intergenic | 30.0% | |
| ATTGGATATACTTCTGTACA+TGG | - | chr1.4:6873809-6873828 | MS.gene058427:CDS | 30.0% | |
| CACAGTTGAAATCATTAATG+TGG | - | chr1.4:6872918-6872937 | MS.gene058427:CDS | 30.0% | |
| CACATTAATGATTTCAACTG+TGG | + | chr1.4:6872920-6872939 | None:intergenic | 30.0% | |
| CTAAGAAATTATGAACCAGT+TGG | - | chr1.4:6874559-6874578 | MS.gene058427:CDS | 30.0% | |
| CTATATCAAAAGCTTGATGA+GGG | - | chr1.4:6872733-6872752 | MS.gene058427:intron | 30.0% | |
| GAATAATTCTGTTTCAGGAA+GGG | - | chr1.4:6874085-6874104 | MS.gene058427:CDS | 30.0% | |
| GAGTCTGAAAATAAAGATGT+TGG | - | chr1.4:6871815-6871834 | MS.gene058427:CDS | 30.0% | |
| TACACTTGAACATAACTATG+AGG | - | chr1.4:6873389-6873408 | MS.gene058427:CDS | 30.0% | |
| TATATCAAAAGCTTGATGAG+GGG | - | chr1.4:6872734-6872753 | MS.gene058427:intron | 30.0% | |
| TCCATGAATAATTCTGTTTC+AGG | - | chr1.4:6874080-6874099 | MS.gene058427:CDS | 30.0% | |
| TCCTGAAACAGAATTATTCA+TGG | + | chr1.4:6874084-6874103 | None:intergenic | 30.0% | |
| TCTTCATCGGATATTTCAAT+TGG | + | chr1.4:6873615-6873634 | None:intergenic | 30.0% | |
| TGAATAATTCTGTTTCAGGA+AGG | - | chr1.4:6874084-6874103 | MS.gene058427:CDS | 30.0% | |
| TGATTTATGCTTCTGTTGTT+GGG | - | chr1.4:6872329-6872348 | MS.gene058427:CDS | 30.0% | |
| TGTTGAATCAAGATATCTTG+TGG | - | chr1.4:6874896-6874915 | MS.gene058427:CDS | 30.0% | |
| TTGATTTATGCTTCTGTTGT+TGG | - | chr1.4:6872328-6872347 | MS.gene058427:CDS | 30.0% | |
| TTTCGGTTATCAAGTAATGA+AGG | - | chr1.4:6872504-6872523 | MS.gene058427:CDS | 30.0% | |
| ! | AATTCTTAGCATTTCTGAAG+AGG | + | chr1.4:6873725-6873744 | None:intergenic | 30.0% |
| ! | AATTTTCCATCAGTGAACAA+GGG | - | chr1.4:6872830-6872849 | MS.gene058427:intron | 30.0% |
| ! | ACTGGTTCATAATTTCTTAG+AGG | + | chr1.4:6874559-6874578 | None:intergenic | 30.0% |
| ! | ATTCTTAGCATTTCTGAAGA+GGG | + | chr1.4:6873724-6873743 | None:intergenic | 30.0% |
| ! | ATTTTGAATCTAGATTGAGG+TGG | + | chr1.4:6874685-6874704 | None:intergenic | 30.0% |
| ! | CTCAAGATCTTCAAGAATTT+TGG | + | chr1.4:6873508-6873527 | None:intergenic | 30.0% |
| !!! | ACTATTTTTTGTAAGGACAC+CGG | + | chr1.4:6874725-6874744 | None:intergenic | 30.0% |
| !!! | ATATCGTTACCTATTTTTGC+AGG | + | chr1.4:6873789-6873808 | None:intergenic | 30.0% |
| !!! | TACCACCACTATTTTTTGTA+AGG | + | chr1.4:6874732-6874751 | None:intergenic | 30.0% |
| AACTGAATCCTCAATCTTCA+TGG | + | chr1.4:6873088-6873107 | None:intergenic | 35.0% | |
| AATGAAGCAGTGATGAATTC+TGG | - | chr1.4:6872682-6872701 | MS.gene058427:intron | 35.0% | |
| ACATAAAAAGCCACATAGCT+TGG | - | chr1.4:6873173-6873192 | MS.gene058427:CDS | 35.0% | |
| ACCGAGTTTAGAAGAGTTAT+GGG | - | chr1.4:6872405-6872424 | MS.gene058427:CDS | 35.0% | |
| AGATCCTCACTTACAAATCT+CGG | + | chr1.4:6871995-6872014 | None:intergenic | 35.0% | |
| AGATGGTAGAAGGCTTAAAA+GGG | + | chr1.4:6871928-6871947 | None:intergenic | 35.0% | |
| AGCATAAATCAAGAATCGCT+TGG | + | chr1.4:6872320-6872339 | None:intergenic | 35.0% | |
| ATATTACCTTCGATTGGTGA+AGG | - | chr1.4:6873642-6873661 | MS.gene058427:CDS | 35.0% | |
| ATCATTAATGCAGAGAAGGA+AGG | - | chr1.4:6873482-6873501 | MS.gene058427:CDS | 35.0% | |
| ATCCGACACAATATGCTTAA+TGG | + | chr1.4:6873907-6873926 | None:intergenic | 35.0% | |
| CACTTAAGTAGTGTTCTTCT+TGG | + | chr1.4:6873134-6873153 | None:intergenic | 35.0% | |
| CATCCAAGGAGAACATAATT+TGG | - | chr1.4:6874375-6874394 | MS.gene058427:CDS | 35.0% | |
| CCTATATCAAAAGCTTGATG+AGG | - | chr1.4:6872732-6872751 | MS.gene058427:intron | 35.0% | |
| CTAAAACAAGCAACATTGTC+GGG | + | chr1.4:6872604-6872623 | None:intergenic | 35.0% | |
| CTTCATGTTCATTCGATTGA+GGG | - | chr1.4:6872115-6872134 | MS.gene058427:CDS | 35.0% | |
| GAACTTCAATAATTCAGCAC+GGG | - | chr1.4:6872756-6872775 | MS.gene058427:intron | 35.0% | |
| GATTTATGCTTCTGTTGTTG+GGG | - | chr1.4:6872330-6872349 | MS.gene058427:CDS | 35.0% | |
| GGAACTTCAATAATTCAGCA+CGG | - | chr1.4:6872755-6872774 | MS.gene058427:intron | 35.0% | |
| GGTGTCCTTACAAAAAATAG+TGG | - | chr1.4:6874724-6874743 | MS.gene058427:CDS | 35.0% | |
| GTACATAGATGTTCGGTTTA+TGG | - | chr1.4:6872256-6872275 | MS.gene058427:CDS | 35.0% | |
| GTCCTTACAAAAAATAGTGG+TGG | - | chr1.4:6874727-6874746 | MS.gene058427:CDS | 35.0% | |
| GTGATAAAAGTTCAGGGAAA+TGG | - | chr1.4:6872428-6872447 | MS.gene058427:CDS | 35.0% | |
| GTTCCAAATTATGTTCTCCT+TGG | + | chr1.4:6874381-6874400 | None:intergenic | 35.0% | |
| TAAAACAAGCAACATTGTCG+GGG | + | chr1.4:6872603-6872622 | None:intergenic | 35.0% | |
| TAACTATGAGGATTATGACG+TGG | - | chr1.4:6873401-6873420 | MS.gene058427:CDS | 35.0% | |
| TAAGTGAGGATCTGTTGATA+GGG | - | chr1.4:6872002-6872021 | MS.gene058427:CDS | 35.0% | |
| TAATATGGACGGTTCTTCAT+CGG | + | chr1.4:6873628-6873647 | None:intergenic | 35.0% | |
| TAGAGACTAATGCACACATT+AGG | - | chr1.4:6874944-6874963 | MS.gene058427:CDS | 35.0% | |
| TAGGAATGTGAATGTGGATA+TGG | - | chr1.4:6873014-6873033 | MS.gene058427:CDS | 35.0% | |
| TATGGGGTGATAAAAGTTCA+GGG | - | chr1.4:6872422-6872441 | MS.gene058427:CDS | 35.0% | |
| TATTACCTTCGATTGGTGAA+GGG | - | chr1.4:6873643-6873662 | MS.gene058427:CDS | 35.0% | |
| TCGTTCGAATTTGATCAAAC+AGG | - | chr1.4:6872874-6872893 | MS.gene058427:CDS | 35.0% | |
| TCTTCATGTTCATTCGATTG+AGG | - | chr1.4:6872114-6872133 | MS.gene058427:CDS | 35.0% | |
| TGTCTTAAAAGCTTCTCTCT+AGG | + | chr1.4:6873294-6873313 | None:intergenic | 35.0% | |
| TTATGGGGTGATAAAAGTTC+AGG | - | chr1.4:6872421-6872440 | MS.gene058427:CDS | 35.0% | |
| TTCACCAATCGAAGGTAATA+TGG | + | chr1.4:6873643-6873662 | None:intergenic | 35.0% | |
| TTGAAAATTCTCCAAGAACC+TGG | - | chr1.4:6873571-6873590 | MS.gene058427:CDS | 35.0% | |
| TTTCCAGTGATATCTAGCAA+AGG | + | chr1.4:6873882-6873901 | None:intergenic | 35.0% | |
| ! | ATTTTCCATCAGTGAACAAG+GGG | - | chr1.4:6872831-6872850 | MS.gene058427:intron | 35.0% |
| ! | CCTCATCAAGCTTTTGATAT+AGG | + | chr1.4:6872735-6872754 | None:intergenic | 35.0% |
| ! | GAATTTTCCATCAGTGAACA+AGG | - | chr1.4:6872829-6872848 | MS.gene058427:intron | 35.0% |
| ! | GGAAATGGAGTACAAGTTTT+AGG | - | chr1.4:6872443-6872462 | MS.gene058427:CDS | 35.0% |
| !! | ATCTTTAATTATTGGTGCCG+CGG | - | chr1.4:6873434-6873453 | MS.gene058427:CDS | 35.0% |
| !! | ATGAGATTTGGTGCTAGTAA+TGG | - | chr1.4:6872535-6872554 | MS.gene058427:CDS | 35.0% |
| !! | ATGTTCTAGGAATGTGAATG+TGG | - | chr1.4:6873008-6873027 | MS.gene058427:CDS | 35.0% |
| !! | GATTTTAATGCGAATGAGGA+GGG | - | chr1.4:6873354-6873373 | MS.gene058427:CDS | 35.0% |
| !! | TATAATGATGGGTTGGGAAA+TGG | - | chr1.4:6874448-6874467 | MS.gene058427:CDS | 35.0% |
| !! | TGAGATTTGGTGCTAGTAAT+GGG | - | chr1.4:6872536-6872555 | MS.gene058427:CDS | 35.0% |
| !! | TGATTTTAATGCGAATGAGG+AGG | - | chr1.4:6873353-6873372 | MS.gene058427:CDS | 35.0% |
| !!! | AGTACAAGTTTTAGGTTGGT+TGG | - | chr1.4:6872451-6872470 | MS.gene058427:CDS | 35.0% |
| !!! | ATGGAGTACAAGTTTTAGGT+TGG | - | chr1.4:6872447-6872466 | MS.gene058427:CDS | 35.0% |
| AAACCCGAGATTTGTAAGTG+AGG | - | chr1.4:6871988-6872007 | MS.gene058427:CDS | 40.0% | |
| AACAATGGGGTTTAGATGAG+AGG | - | chr1.4:6873544-6873563 | MS.gene058427:CDS | 40.0% | |
| AAGACTAACAAGGAAGCTTC+TGG | - | chr1.4:6873930-6873949 | MS.gene058427:CDS | 40.0% | |
| ACAATGGGGTTTAGATGAGA+GGG | - | chr1.4:6873545-6873564 | MS.gene058427:CDS | 40.0% | |
| ACATGACATTGGGAAACATC+AGG | - | chr1.4:6872360-6872379 | MS.gene058427:CDS | 40.0% | |
| ATAGGGATGTCGTAAAGCTT+CGG | - | chr1.4:6872632-6872651 | MS.gene058427:CDS | 40.0% | |
| ATCAAGGAGATTCATCTTGC+CGG | - | chr1.4:6874703-6874722 | MS.gene058427:CDS | 40.0% | |
| ATGACATCATCCAAGCTATG+TGG | + | chr1.4:6873186-6873205 | None:intergenic | 40.0% | |
| ATGCCTTTGCTAGATATCAC+TGG | - | chr1.4:6873876-6873895 | MS.gene058427:CDS | 40.0% | |
| ATTTCTCCACGAATGCATGA+TGG | + | chr1.4:6874283-6874302 | None:intergenic | 40.0% | |
| CAATGGTTGAGACTTGATTC+TGG | - | chr1.4:6874349-6874368 | MS.gene058427:CDS | 40.0% | |
| CACCGAGTTTAGAAGAGTTA+TGG | - | chr1.4:6872404-6872423 | MS.gene058427:CDS | 40.0% | |
| CATAACTCTTCTAAACTCGG+TGG | + | chr1.4:6872406-6872425 | None:intergenic | 40.0% | |
| CATAGATGTTCGGTTTATGG+TGG | - | chr1.4:6872259-6872278 | MS.gene058427:CDS | 40.0% | |
| CCAATCGAAGGTAATATGGA+CGG | + | chr1.4:6873639-6873658 | None:intergenic | 40.0% | |
| CCCCATAACTCTTCTAAACT+CGG | + | chr1.4:6872409-6872428 | None:intergenic | 40.0% | |
| CCGAGTTTAGAAGAGTTATG+GGG | - | chr1.4:6872406-6872425 | MS.gene058427:CDS | 40.0% | |
| CTAACGCCATTGAAACTCAA+AGG | + | chr1.4:6872145-6872164 | None:intergenic | 40.0% | |
| GAAATCAACGACGATCTTGA+TGG | - | chr1.4:6874298-6874317 | MS.gene058427:CDS | 40.0% | |
| GAATCCTCAATCTTCATGGA+TGG | + | chr1.4:6873084-6873103 | None:intergenic | 40.0% | |
| GAGATGGTAGAAGGCTTAAA+AGG | + | chr1.4:6871929-6871948 | None:intergenic | 40.0% | |
| GAGTGATTTCTTAAAGACGC+TGG | - | chr1.4:6873218-6873237 | MS.gene058427:CDS | 40.0% | |
| GATCCTCACTTACAAATCTC+GGG | + | chr1.4:6871994-6872013 | None:intergenic | 40.0% | |
| GATGGTAGAAGGCTTAAAAG+GGG | + | chr1.4:6871927-6871946 | None:intergenic | 40.0% | |
| GATTAGAAGCCTGAATGATG+AGG | + | chr1.4:6873755-6873774 | None:intergenic | 40.0% | |
| GGTTAAGTGTGCATTGGAAA+AGG | - | chr1.4:6872164-6872183 | MS.gene058427:CDS | 40.0% | |
| GTAAGTGAGGATCTGTTGAT+AGG | - | chr1.4:6872001-6872020 | MS.gene058427:CDS | 40.0% | |
| GTCGTTCTACCTGCAAAAAT+AGG | - | chr1.4:6873777-6873796 | MS.gene058427:CDS | 40.0% | |
| GTCTAGCATGTCAAATGAAG+AGG | - | chr1.4:6874255-6874274 | MS.gene058427:CDS | 40.0% | |
| TAACGCAAGATGTGATTCAC+TGG | - | chr1.4:6872978-6872997 | MS.gene058427:CDS | 40.0% | |
| TCGTTTGTTCAAACTACGAG+CGG | - | chr1.4:6873672-6873691 | MS.gene058427:CDS | 40.0% | |
| TCTACCATCCATGAAGATTG+AGG | - | chr1.4:6873077-6873096 | MS.gene058427:CDS | 40.0% | |
| TGCGGAGTTTGATGAAACTT+TGG | - | chr1.4:6872234-6872253 | MS.gene058427:CDS | 40.0% | |
| TGTCAGTAACGTTGGATCAA+TGG | - | chr1.4:6874332-6874351 | MS.gene058427:CDS | 40.0% | |
| TGTTTCCCAATGTCATGTTC+AGG | + | chr1.4:6872358-6872377 | None:intergenic | 40.0% | |
| TTTCTTAAAGACGCTGGCAT+TGG | - | chr1.4:6873224-6873243 | MS.gene058427:CDS | 40.0% | |
| ! | AAGTGAGGATCTGTTGATAG+GGG | - | chr1.4:6872003-6872022 | MS.gene058427:CDS | 40.0% |
| ! | AGGTTGGTTGGAAAAGCTTT+AGG | - | chr1.4:6872463-6872482 | MS.gene058427:CDS | 40.0% |
| ! | ATTTTTGCAGGTAGAACGAC+TGG | + | chr1.4:6873777-6873796 | None:intergenic | 40.0% |
| ! | CACTTTGGGAACATGATATC+AGG | + | chr1.4:6874973-6874992 | None:intergenic | 40.0% |
| ! | CTTTGAGTTTCAATGGCGTT+AGG | - | chr1.4:6872143-6872162 | MS.gene058427:CDS | 40.0% |
| ! | GGACTTCCTTTGAGTTTCAA+TGG | - | chr1.4:6872136-6872155 | MS.gene058427:CDS | 40.0% |
| ! | TTAGCATTTCTGAAGAGGGA+AGG | + | chr1.4:6873720-6873739 | None:intergenic | 40.0% |
| ! | TTTTCAGCAGAGATGGTAGA+AGG | + | chr1.4:6871938-6871957 | None:intergenic | 40.0% |
| !! | AACATCAGGTTGATCTCACT+AGG | - | chr1.4:6872374-6872393 | MS.gene058427:CDS | 40.0% |
| !!! | TCCAATACTGGTTTTAGCTC+AGG | - | chr1.4:6874585-6874604 | MS.gene058427:CDS | 40.0% |
| AACACCACGTCATTCTGAGT+CGG | + | chr1.4:6872658-6872677 | None:intergenic | 45.0% | |
| AACCGTCCAATACCCTTGAT+GGG | + | chr1.4:6872213-6872232 | None:intergenic | 45.0% | |
| AATGCGAATGAGGAGGGATT+GGG | - | chr1.4:6873360-6873379 | MS.gene058427:CDS | 45.0% | |
| AATTCTCCAAGAACCTGGTC+TGG | - | chr1.4:6873576-6873595 | MS.gene058427:CDS | 45.0% | |
| ACCAGTTGGAGTTCCAATAC+TGG | - | chr1.4:6874573-6874592 | MS.gene058427:CDS | 45.0% | |
| AGGGGTAGAAACATCTGAAG+AGG | - | chr1.4:6872849-6872868 | MS.gene058427:CDS | 45.0% | |
| CACTGGATACCGTATGTTCT+AGG | - | chr1.4:6872995-6873014 | MS.gene058427:CDS | 45.0% | |
| CCGTCCATATTACCTTCGAT+TGG | - | chr1.4:6873636-6873655 | MS.gene058427:CDS | 45.0% | |
| CTAACAAGGAAGCTTCTGGA+AGG | - | chr1.4:6873934-6873953 | MS.gene058427:CDS | 45.0% | |
| CTTGATTCTGGCATCATCCA+AGG | - | chr1.4:6874361-6874380 | MS.gene058427:CDS | 45.0% | |
| GACAGTATTACACATGCCAC+TGG | + | chr1.4:6874812-6874831 | None:intergenic | 45.0% | |
| GATGGATCTGTCAGTAACGT+TGG | - | chr1.4:6874324-6874343 | MS.gene058427:CDS | 45.0% | |
| GCCTGAGCTAAAACCAGTAT+TGG | + | chr1.4:6874589-6874608 | None:intergenic | 45.0% | |
| GCGTTAGGTTAAGTGTGCAT+TGG | - | chr1.4:6872158-6872177 | MS.gene058427:CDS | 45.0% | |
| GGGAACCTGAACATGACATT+GGG | - | chr1.4:6872350-6872369 | MS.gene058427:CDS | 45.0% | |
| GTCAAGAAACTCTGACGTCT+CGG | + | chr1.4:6873112-6873131 | None:intergenic | 45.0% | |
| GTCGGATGCTAAGACTAACA+AGG | - | chr1.4:6873920-6873939 | MS.gene058427:CDS | 45.0% | |
| TAATGCGAATGAGGAGGGAT+TGG | - | chr1.4:6873359-6873378 | MS.gene058427:CDS | 45.0% | |
| TCATTTCGCTCAAGCTGTGA+CGG | - | chr1.4:6873255-6873274 | MS.gene058427:CDS | 45.0% | |
| TCTGTTTCAGGAAGGGATCA+TGG | - | chr1.4:6874092-6874111 | MS.gene058427:CDS | 45.0% | |
| TGGTGGTAACCGACAAGTTT+GGG | - | chr1.4:6874744-6874763 | MS.gene058427:CDS | 45.0% | |
| TTCTACCCCTTGTTCACTGA+TGG | + | chr1.4:6872839-6872858 | None:intergenic | 45.0% | |
| TTCTTAGAGGATCTCTGTGC+TGG | + | chr1.4:6874546-6874565 | None:intergenic | 45.0% | |
| TTTGCAGACTTGCCCATCAA+GGG | - | chr1.4:6872198-6872217 | MS.gene058427:CDS | 45.0% | |
| TTTGTTCAAACTACGAGCGG+AGG | - | chr1.4:6873675-6873694 | MS.gene058427:CDS | 45.0% | |
| ! | AAGCTTCTCTCTAGGAGACA+TGG | + | chr1.4:6873286-6873305 | None:intergenic | 45.0% |
| ! | ACCAGTATTGGAACTCCAAC+TGG | + | chr1.4:6874577-6874596 | None:intergenic | 45.0% |
| ! | AGCTTCTCTCTAGGAGACAT+GGG | + | chr1.4:6873285-6873304 | None:intergenic | 45.0% |
| ! | CGACGATCTTGATGGTTTGA+TGG | - | chr1.4:6874306-6874325 | MS.gene058427:CDS | 45.0% |
| ! | GAAAATGAGGCTCTAGCTTC+AGG | - | chr1.4:6873318-6873337 | MS.gene058427:CDS | 45.0% |
| ! | GGCAGAAAGCGCAGTTATTT+GGG | - | chr1.4:6874493-6874512 | MS.gene058427:CDS | 45.0% |
| ! | TGGCAGAAAGCGCAGTTATT+TGG | - | chr1.4:6874492-6874511 | MS.gene058427:CDS | 45.0% |
| ! | TTTGGGAGAGCACATAACAG+TGG | - | chr1.4:6874510-6874529 | MS.gene058427:CDS | 45.0% |
| ! | TTTTGCAGACTTGCCCATCA+AGG | - | chr1.4:6872197-6872216 | MS.gene058427:CDS | 45.0% |
| !! | GTTGGGAAATGGCACTGATA+AGG | - | chr1.4:6874459-6874478 | MS.gene058427:CDS | 45.0% |
| !!! | ACGGTCTTTTTCAGCAGAGA+TGG | + | chr1.4:6871945-6871964 | None:intergenic | 45.0% |
| AATCCACCAGACCAGGTTCT+TGG | + | chr1.4:6873585-6873604 | None:intergenic | 50.0% | |
| ACTGCGTCTCAGCAACAATC+CGG | - | chr1.4:6874769-6874788 | MS.gene058427:CDS | 50.0% | |
| ACTTCCAAATCCACCAGACC+AGG | + | chr1.4:6873592-6873611 | None:intergenic | 50.0% | |
| ATGCGAATGAGGAGGGATTG+GGG | - | chr1.4:6873361-6873380 | MS.gene058427:CDS | 50.0% | |
| CCTTTCATACTCCTCTTCCG+CGG | + | chr1.4:6873454-6873473 | None:intergenic | 50.0% | |
| GAACCGTCCAATACCCTTGA+TGG | + | chr1.4:6872214-6872233 | None:intergenic | 50.0% | |
| GGGGAACCTGAACATGACAT+TGG | - | chr1.4:6872349-6872368 | MS.gene058427:CDS | 50.0% | |
| GGTGGTAACCGACAAGTTTG+GGG | - | chr1.4:6874745-6874764 | MS.gene058427:CDS | 50.0% | |
| GTGGTGGTAACCGACAAGTT+TGG | - | chr1.4:6874743-6874762 | MS.gene058427:CDS | 50.0% | |
| TAATTCAGCACGGGCAGACT+CGG | - | chr1.4:6872765-6872784 | MS.gene058427:intron | 50.0% | |
| TCTGAAGAGGGAAGGACACA+TGG | + | chr1.4:6873712-6873731 | None:intergenic | 50.0% | |
| TTGTGCGAGCCTCATCATTC+AGG | - | chr1.4:6873743-6873762 | MS.gene058427:CDS | 50.0% | |
| ! | CGCGGAAGAGGAGTATGAAA+GGG | - | chr1.4:6873452-6873471 | MS.gene058427:CDS | 50.0% |
| ! | GACTTGCCCATCAAGGGTAT+TGG | - | chr1.4:6872204-6872223 | MS.gene058427:CDS | 50.0% |
| !! | AAGGGTATTGGACGGTTCTG+CGG | - | chr1.4:6872216-6872235 | MS.gene058427:CDS | 50.0% |
| !! | AATTATTGGTGCCGCGGAAG+AGG | - | chr1.4:6873440-6873459 | MS.gene058427:CDS | 50.0% |
| !! | AGAACCTGGTCTGGTGGATT+TGG | - | chr1.4:6873585-6873604 | MS.gene058427:CDS | 50.0% |
| !! | GCAGTGATGAATTCTGGCTC+AGG | - | chr1.4:6872688-6872707 | MS.gene058427:intron | 50.0% |
| !! | TGCCCATCAAGGGTATTGGA+CGG | - | chr1.4:6872208-6872227 | MS.gene058427:CDS | 50.0% |
| !! | TTGCGTTGGTTGCTTTCCAG+TGG | - | chr1.4:6874793-6874812 | MS.gene058427:CDS | 50.0% |
| ACGCAGTGCCCCAAACTTGT+CGG | + | chr1.4:6874756-6874775 | None:intergenic | 55.0% | |
| AGCAACAATCCGGGTTGCGT+TGG | - | chr1.4:6874779-6874798 | MS.gene058427:CDS | 55.0% | |
| CCAAGCCCTTCACCAATCGA+AGG | + | chr1.4:6873651-6873670 | None:intergenic | 55.0% | |
| CCTTCGATTGGTGAAGGGCT+TGG | - | chr1.4:6873648-6873667 | MS.gene058427:CDS | 55.0% | |
| CTGCGTCTCAGCAACAATCC+GGG | - | chr1.4:6874770-6874789 | MS.gene058427:CDS | 55.0% | |
| GCAGACTCGGAGTCATCTCA+AGG | - | chr1.4:6872778-6872797 | MS.gene058427:intron | 55.0% | |
| GGAAAGCAACCAACGCAACC+CGG | + | chr1.4:6874791-6874810 | None:intergenic | 55.0% | |
| TCTCCAAGAACCTGGTCTGG+TGG | - | chr1.4:6873579-6873598 | MS.gene058427:CDS | 55.0% | |
| ! | CCGCGGAAGAGGAGTATGAA+AGG | - | chr1.4:6873451-6873470 | MS.gene058427:CDS | 55.0% |
| ! | CTACGAGCGGAGGCTTTTTG+AGG | - | chr1.4:6873685-6873704 | MS.gene058427:CDS | 55.0% |
| ! | GAGGCACCATCATGCATTCG+TGG | - | chr1.4:6874274-6874293 | MS.gene058427:CDS | 55.0% |
| TATGGTGGTCGCGTCGTGTC+TGG | - | chr1.4:6872274-6872293 | MS.gene058427:CDS | 60.0% | |
| ! | TCGGCCGACTCAGAATGACG+TGG | - | chr1.4:6872651-6872670 | MS.gene058427:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 6871794 | 6874993 | 6871794 | ID=MS.gene058427 |
| chr1.4 | mRNA | 6871794 | 6874993 | 6871794 | ID=MS.gene058427.t1;Parent=MS.gene058427 |
| chr1.4 | exon | 6872832 | 6874993 | 6872832 | ID=MS.gene058427.t1.exon1;Parent=MS.gene058427.t1 |
| chr1.4 | CDS | 6872832 | 6874993 | 6872832 | ID=cds.MS.gene058427.t1;Parent=MS.gene058427.t1 |
| chr1.4 | exon | 6871794 | 6872685 | 6871794 | ID=MS.gene058427.t1.exon2;Parent=MS.gene058427.t1 |
| chr1.4 | CDS | 6871794 | 6872685 | 6871794 | ID=cds.MS.gene058427.t1;Parent=MS.gene058427.t1 |
| Gene Sequence |
| Protein sequence |
