AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96423

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96423.t1 MTR_0092s0100 95.658 737 21 3 1 734 1 729 0.0 1431
MS.gene96423.t1 MTR_0092s0100 95.658 737 21 3 1 734 4 732 0.0 1431
MS.gene96423.t1 MTR_4g026485 53.974 541 186 13 209 734 133 625 2.27e-177 521
MS.gene96423.t1 MTR_0092s0060 95.187 187 7 1 1 187 1 185 1.00e-121 362
MS.gene96423.t1 MTR_8g077940 36.216 370 219 11 375 734 180 542 5.52e-60 212
MS.gene96423.t1 MTR_7g027190 26.941 438 268 11 322 734 264 674 3.99e-36 145
MS.gene96423.t1 MTR_3g065980 28.421 380 244 7 374 733 169 540 4.46e-36 144
MS.gene96423.t1 MTR_3g056110 26.790 377 249 9 376 733 174 542 2.33e-32 132
MS.gene96423.t1 MTR_5g058860 29.949 394 232 15 374 734 116 498 3.28e-30 125
MS.gene96423.t1 MTR_4g076020 28.841 371 219 14 380 733 87 429 6.58e-30 124
MS.gene96423.t1 MTR_5g094450 25.469 373 259 7 378 733 162 532 4.75e-29 122
MS.gene96423.t1 MTR_3g072710 27.681 401 234 16 374 734 117 501 1.28e-28 120
MS.gene96423.t1 MTR_3g089055 27.957 372 247 9 378 733 199 565 1.90e-28 121
MS.gene96423.t1 MTR_3g089055 27.957 372 247 9 378 733 204 570 2.12e-28 120
MS.gene96423.t1 MTR_4g077760 29.067 375 242 11 374 733 190 555 2.53e-28 120
MS.gene96423.t1 MTR_5g097480 23.662 355 254 7 393 733 193 544 2.51e-26 114
MS.gene96423.t1 MTR_2g082090 25.714 385 268 8 363 732 197 578 4.13e-26 114
MS.gene96423.t1 MTR_1g029420 27.128 376 245 12 378 733 226 592 5.54e-26 113
MS.gene96423.t1 MTR_8g093070 26.790 377 247 11 371 732 133 495 8.14e-26 112
MS.gene96423.t1 MTR_7g074650 26.359 368 241 9 380 733 441 792 2.04e-25 112
MS.gene96423.t1 MTR_4g133660 24.409 381 252 9 378 734 176 544 8.90e-25 109
MS.gene96423.t1 MTR_2g026250 25.066 379 256 10 376 734 227 597 1.77e-24 108
MS.gene96423.t1 MTR_4g102790 23.810 378 264 7 374 732 289 661 2.64e-23 105
MS.gene96423.t1 MTR_4g104020 25.964 389 247 12 374 734 146 521 4.23e-23 104
MS.gene96423.t1 MTR_5g019750 30.303 231 148 6 511 734 71 295 4.86e-23 100
MS.gene96423.t1 MTR_1g069725 28.267 375 239 15 374 734 106 464 4.06e-22 100
MS.gene96423.t1 MTR_8g442410 23.117 385 260 10 374 733 152 525 2.47e-19 92.8
MS.gene96423.t1 MTR_2g097473 23.358 411 278 11 350 732 252 653 3.83e-19 92.4
MS.gene96423.t1 MTR_2g034280 23.969 388 270 10 363 733 196 575 6.86e-19 91.3
MS.gene96423.t1 MTR_2g034260 24.675 385 260 11 373 733 206 584 9.26e-19 90.9
MS.gene96423.t1 MTR_1g096030 26.020 392 247 14 374 732 77 458 1.15e-18 90.1
MS.gene96423.t1 MTR_2g034250 24.409 381 267 8 373 733 206 585 1.49e-18 90.5
MS.gene96423.t1 MTR_4g097080 21.995 391 274 12 364 733 123 503 1.67e-18 89.7
MS.gene96423.t1 MTR_7g109580 24.933 373 255 12 378 733 190 554 6.22e-18 88.2
MS.gene96423.t1 MTR_4g064200 23.720 371 261 8 378 732 285 649 4.27e-17 85.9
MS.gene96423.t1 MTR_2g097467 23.786 412 275 13 350 732 252 653 4.69e-17 85.9
MS.gene96423.t1 MTR_2g097390 24.665 373 255 11 378 732 276 640 6.26e-17 85.5
MS.gene96423.t1 MTR_2g097410 22.835 381 256 9 378 732 372 740 8.12e-17 85.1
MS.gene96423.t1 MTR_2g097310 23.560 382 248 9 378 732 273 637 1.38e-16 84.3
MS.gene96423.t1 MTR_2g097463 22.520 373 262 8 378 732 291 654 1.58e-16 84.3
MS.gene96423.t1 MTR_7g062120 22.427 379 260 7 378 733 373 740 1.80e-16 84.3
MS.gene96423.t1 MTR_4g064160 22.464 414 279 11 348 732 283 683 3.28e-16 83.2
MS.gene96423.t1 MTR_2g099110 20.788 457 293 11 323 733 18 451 9.11e-16 80.9
MS.gene96423.t1 MTR_2g097380 23.269 361 232 9 385 732 232 560 1.68e-15 80.5
MS.gene96423.t1 MTR_4g064180 22.432 370 265 9 378 728 255 621 3.66e-15 79.7
MS.gene96423.t1 MTR_4g076140 34.118 170 104 2 354 515 19 188 9.97e-15 77.8
MS.gene96423.t1 MTR_2g089100 23.529 408 241 15 378 732 53 442 1.14e-14 77.4
MS.gene96423.t1 MTR_4g064150 21.774 372 273 6 378 732 362 732 2.87e-14 77.0
MS.gene96423.t1 MTR_4g064120 21.409 369 270 7 378 728 255 621 3.97e-14 76.6
MS.gene96423.t1 MTR_2g097350 24.138 377 252 14 378 732 275 639 9.79e-14 75.1
MS.gene96423.t1 MTR_5g009080 28.205 195 134 2 354 546 33 223 1.83e-13 73.9
MS.gene96423.t1 MTR_1g086970 23.460 422 281 17 342 733 69 478 5.00e-13 72.4
MS.gene96423.t1 MTR_5g015490 21.212 396 252 11 378 733 115 490 1.63e-12 70.9
MS.gene96423.t1 MTR_3g022830 31.724 145 89 2 378 516 26 166 1.99e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96423.t1 AT4G00150 56.927 397 140 11 341 734 187 555 2.39e-138 419
MS.gene96423.t1 AT2G45160 48.069 466 201 16 292 734 193 640 8.22e-121 376
MS.gene96423.t1 AT3G60630 44.773 507 200 16 271 734 154 623 1.06e-112 354
MS.gene96423.t1 AT4G36710 33.600 375 221 13 375 733 123 485 3.72e-55 197
MS.gene96423.t1 AT2G01570 29.839 372 238 9 374 733 221 581 4.83e-34 138
MS.gene96423.t1 AT5G17490 29.521 376 233 13 374 733 157 516 5.97e-32 131
MS.gene96423.t1 AT3G03450 27.586 377 245 10 374 733 180 545 3.23e-31 129
MS.gene96423.t1 AT5G66770 27.500 400 253 13 356 733 200 584 5.49e-31 129
MS.gene96423.t1 AT2G04890 26.146 371 248 8 378 733 54 413 4.09e-30 124
MS.gene96423.t1 AT1G14920 26.790 377 243 9 374 733 169 529 2.32e-29 123
MS.gene96423.t1 AT5G41920 25.886 367 259 7 374 733 40 400 2.96e-29 121
MS.gene96423.t1 AT3G50650 28.689 366 234 9 387 733 185 542 9.02e-29 122
MS.gene96423.t1 AT3G54220 27.348 362 246 8 380 732 296 649 1.62e-28 122
MS.gene96423.t1 AT1G66350 26.146 371 249 10 374 734 152 507 3.36e-28 119
MS.gene96423.t1 AT5G48150 24.462 372 261 8 378 733 123 490 5.23e-28 119
MS.gene96423.t1 AT5G48150 24.462 372 261 8 378 733 123 490 5.23e-28 119
MS.gene96423.t1 AT5G48150 24.462 372 261 8 378 733 123 490 5.23e-28 119
MS.gene96423.t1 AT5G48150 24.462 372 261 8 378 733 123 490 5.23e-28 119
MS.gene96423.t1 AT4G08250 28.846 416 260 16 347 732 67 476 5.79e-28 119
MS.gene96423.t1 AT1G50600 24.194 372 261 7 378 733 160 526 2.21e-27 117
MS.gene96423.t1 AT1G50600 24.194 372 261 7 378 733 231 597 5.57e-27 117
MS.gene96423.t1 AT1G21450 25.061 411 270 11 351 733 193 593 5.80e-27 117
MS.gene96423.t1 AT1G50600 24.194 372 261 7 378 733 235 601 6.17e-27 116
MS.gene96423.t1 AT4G17230 26.178 382 241 8 378 733 159 525 2.53e-26 114
MS.gene96423.t1 AT4G17230 26.178 382 241 8 378 733 159 525 2.53e-26 114
MS.gene96423.t1 AT5G59450 23.810 420 279 11 344 733 190 598 1.47e-23 106
MS.gene96423.t1 AT1G63100 24.747 396 245 14 374 732 274 653 1.49e-19 94.0
MS.gene96423.t1 AT1G63100 24.747 396 245 14 374 732 249 628 1.62e-19 93.6
MS.gene96423.t1 AT1G55580 24.465 327 221 6 423 733 129 445 3.44e-19 91.7
MS.gene96423.t1 AT1G07520 21.600 375 265 9 382 732 323 692 1.17e-18 91.3
MS.gene96423.t1 AT1G07520 21.600 375 265 9 382 732 324 693 1.18e-18 91.3
MS.gene96423.t1 AT1G07520 21.390 374 267 8 382 732 159 528 1.62e-18 90.1
MS.gene96423.t1 AT1G07520 21.390 374 267 8 382 732 159 528 1.62e-18 90.1
MS.gene96423.t1 AT3G46600 22.762 391 274 9 366 733 194 579 1.14e-17 87.8
MS.gene96423.t1 AT3G46600 22.762 391 274 9 366 733 162 547 3.61e-17 85.9
MS.gene96423.t1 AT3G46600 22.849 372 266 8 378 733 5 371 5.95e-17 84.0
MS.gene96423.t1 AT1G07530 23.342 377 258 9 378 732 397 764 3.14e-16 83.6
MS.gene96423.t1 AT1G50420 30.055 183 110 4 374 547 54 227 3.52e-15 79.3
MS.gene96423.t1 AT4G37650 22.081 394 258 10 378 733 147 529 6.90e-15 78.6
MS.gene96423.t1 AT2G29065 21.485 377 272 7 378 732 253 627 6.36e-13 72.8
MS.gene96423.t1 AT5G52510 23.274 391 246 12 378 733 269 640 9.34e-13 72.0

Find 155 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7.1:+56656273 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7.1:-56656912 MS.gene96423:CDS
GGCAATTGAGAAGCTTGTTT+TGG 0.238119 7.1:-56654984 MS.gene96423:CDS
AAGTTACCATTTGAAGAAAT+AGG 0.249425 7.1:+56656402 None:intergenic
AGTCTCTGAATTCTGTTTCA+TGG 0.261651 7.1:-56655291 MS.gene96423:CDS
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7.1:-56656324 MS.gene96423:CDS
TCTTCGCCGCCACCGCTTCC+AGG 0.266115 7.1:+56655880 None:intergenic
TTCCATTATCAATTTCAATA+TGG 0.276508 7.1:+56656551 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7.1:-56656031 MS.gene96423:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7.1:-56656553 MS.gene96423:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7.1:+56655743 None:intergenic
GCATAAACTGAGCTTGGTTT+TGG 0.318676 7.1:+56656160 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7.1:+56656756 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7.1:-56656529 MS.gene96423:CDS
AATGGCGCATAAGCAGAAAA+TGG 0.330464 7.1:-56655908 MS.gene96423:CDS
GTTTATGCCTAACCCTAGTT+TGG 0.334769 7.1:-56656145 MS.gene96423:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7.1:-56656025 MS.gene96423:CDS
GGAACACGCGCAAGGGATAT+TGG 0.347128 7.1:-56655779 MS.gene96423:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7.1:-56656462 MS.gene96423:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7.1:+56656274 None:intergenic
CAGCATCAACAACAATCAAT+TGG 0.353717 7.1:-56656222 MS.gene96423:CDS
AAAACAAGCTTCTCAATTGC+CGG 0.355848 7.1:+56654986 None:intergenic
AAGATACCCTTCTTGGATTC+GGG 0.361865 7.1:-56656024 MS.gene96423:CDS
TGTTTGGTGCAGAGGATTCC+TGG 0.364499 7.1:-56654857 MS.gene96423:CDS
TTTGCACTCCAGTCTTATTC+CGG 0.364854 7.1:-56655088 MS.gene96423:CDS
AGTTACCATTTGAAGAAATA+GGG 0.368741 7.1:+56656403 None:intergenic
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7.1:-56656005 MS.gene96423:CDS
ATCGGTAGAAGCGCCGCCTC+CGG 0.394887 7.1:+56656698 None:intergenic
CAATCACCAAATTTCTCCTA+TGG 0.395643 7.1:-56655749 MS.gene96423:CDS
TATGTATTCTTCAAAGGGTA+AGG 0.404339 7.1:+56656935 None:intergenic
ACTTATAGACGCCGGTAATC+CGG 0.404547 7.1:-56655800 MS.gene96423:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7.1:-56656408 MS.gene96423:CDS
AAAGATGTGGAATGGAAGAT+TGG 0.408700 7.1:-56656617 MS.gene96423:CDS
TAAGCAGCTCATGCCTAAAA+TGG 0.410057 7.1:-56655170 MS.gene96423:CDS
AATATCCCTTGCGCGTGTTC+CGG 0.413029 7.1:+56655781 None:intergenic
TTTCATGGCCGCAGCCACTA+CGG 0.414307 7.1:-56655276 MS.gene96423:CDS
AAATTTGCAAACTGCAGAAC+AGG 0.415407 7.1:+56655577 None:intergenic
GGGAACCCTGGAAGCGGTGG+CGG 0.418143 7.1:-56655886 MS.gene96423:CDS
TTGCGCGTGTTCCGGATTAC+CGG 0.426339 7.1:+56655789 None:intergenic
ATGGCGCATAAGCAGAAAAT+GGG 0.428884 7.1:-56655907 MS.gene96423:CDS
AGAGTCGCAGGCAGAGTGTT+TGG 0.429838 7.1:-56654873 MS.gene96423:CDS
CCACAGCTTCAAGCAATGCT+TGG 0.439953 7.1:+56655545 None:intergenic
TAATTTGAGAAAGAGCAAAT+AGG 0.442683 7.1:+56655226 None:intergenic
AGCTTGTGGTATGTTTCTGT+TGG 0.443296 7.1:+56656647 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7.1:-56655628 MS.gene96423:CDS
TCGATCATCTGAAGTACATC+CGG 0.446716 7.1:+56655025 None:intergenic
ATCTCATCTCGGTTTCAACT+TGG 0.447156 7.1:-56654775 MS.gene96423:CDS
TTTCCTATGTATTCTTCAAA+GGG 0.453051 7.1:+56656930 None:intergenic
TTCATGGCCGCAGCCACTAC+GGG 0.456446 7.1:-56655275 MS.gene96423:CDS
GAGGCTGAAGCTGAATCTCT+TGG 0.460878 7.1:+56656088 None:intergenic
TTCATCCCTCTACTACCAAA+AGG 0.463150 7.1:+56656309 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7.1:-56656258 MS.gene96423:CDS
TTTGGGCCGTTTGGGTTCGC+AGG 0.468143 7.1:-56654966 MS.gene96423:CDS
GGTGCAGAGGATTCCTGGTA+GGG 0.470286 7.1:-56654852 MS.gene96423:CDS
ATCAAGTGATTCAAGCAAAC+CGG 0.470386 7.1:+56655069 None:intergenic
GGTTAGGCATAAACTGAGCT+TGG 0.478491 7.1:+56656154 None:intergenic
GCCTAAAATGGTCGTAACAT+TGG 0.480868 7.1:-56655158 MS.gene96423:CDS
TTCTATCCTGCGAACCCAAA+CGG 0.480883 7.1:+56654960 None:intergenic
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7.1:-56656819 MS.gene96423:CDS
AAGATGTGGAATGGAAGATT+GGG 0.482044 7.1:-56656616 MS.gene96423:CDS
CTCGATTTCGTCGTGGTGTG+AGG 0.482198 7.1:+56655393 None:intergenic
CCATTGGCCTCTGCTGCAGA+TGG 0.483207 7.1:+56655926 None:intergenic
CGCAGGATAGAACACTTCCT+TGG 0.483347 7.1:-56654949 MS.gene96423:CDS
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7.1:+56655549 None:intergenic
TTTGAAGAATACATAGGAAA+AGG 0.490303 7.1:-56656927 MS.gene96423:CDS
CGCTTGTCTTGTGTTGGCAA+AGG 0.491242 7.1:-56654802 MS.gene96423:CDS
AGCATCAACAACAATCAATT+GGG 0.491428 7.1:-56656221 MS.gene96423:CDS
AGAATTCGCTTGTCTTGTGT+TGG 0.495542 7.1:-56654808 MS.gene96423:CDS
TGGTGCAGAGGATTCCTGGT+AGG 0.496504 7.1:-56654853 MS.gene96423:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.497760 7.1:-56656711 MS.gene96423:CDS
AGCACTAAAGGCAGGTATGA+AGG 0.498213 7.1:+56655202 None:intergenic
CTTTGCGCCGGTGGTGCTAT+CGG 0.499180 7.1:+56656680 None:intergenic
TCGCAATCCCGTAGTGGCTG+CGG 0.501357 7.1:+56655268 None:intergenic
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7.1:+56655631 None:intergenic
AATCACCAAATTTCTCCTAT+GGG 0.509811 7.1:-56655748 MS.gene96423:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7.1:+56656027 None:intergenic
CCATCTGCAGCAGAGGCCAA+TGG 0.514076 7.1:-56655926 MS.gene96423:CDS
CGAGAAATACTATCTGCAAC+CGG 0.516860 7.1:-56655005 MS.gene96423:CDS
ACAATGGTCTTCATTTATGC+AGG 0.517675 7.1:-56655473 MS.gene96423:CDS
GTGCAGAGGATTCCTGGTAG+GGG 0.518621 7.1:-56654851 MS.gene96423:CDS
AAAATCATATGCTGAGGAAA+CGG 0.519993 7.1:+56655109 None:intergenic
TTACCCTTTGAAGAATACAT+AGG 0.522370 7.1:-56656933 MS.gene96423:CDS
CCAAGCATTGCTTGAAGCTG+TGG 0.524919 7.1:-56655545 MS.gene96423:CDS
CTTCGCCGCCACCGCTTCCA+GGG 0.526440 7.1:+56655881 None:intergenic
TCATCCCTCTACTACCAAAA+GGG 0.532544 7.1:+56656310 None:intergenic
TGTCTTGTGTTGGCAAAGGA+AGG 0.534777 7.1:-56654798 MS.gene96423:CDS
ATGGGGAACCCTGGAAGCGG+TGG 0.534973 7.1:-56655889 MS.gene96423:CDS
CGATCATCTGAAGTACATCC+GGG 0.536848 7.1:+56655026 None:intergenic
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7.1:+56656738 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7.1:+56656017 None:intergenic
CAAGCAAACCGGAATAAGAC+TGG 0.539954 7.1:+56655080 None:intergenic
TCCACATGGAATCCCCTACC+AGG 0.543648 7.1:+56654839 None:intergenic
CGGTGGCGGCGAAGATGTGT+CGG 0.546303 7.1:-56655872 MS.gene96423:CDS
GATATTGAAGATGCATCTAT+GGG 0.546979 7.1:-56656528 MS.gene96423:CDS
TAGTAACTTCACAGAGTCGC+AGG 0.548006 7.1:-56654885 MS.gene96423:CDS
ATTGTTATCCTTTGCGCCGG+TGG 0.548468 7.1:+56656671 None:intergenic
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7.1:+56655623 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7.1:+56655733 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7.1:-56656255 MS.gene96423:CDS
GCCTCCGGCGCTACCGTGTG+AGG 0.550488 7.1:+56656713 None:intergenic
TTCCTCACCATCTGCAGCAG+AGG 0.553713 7.1:-56655933 MS.gene96423:CDS
ACGGGATTGCGAAGCAGTTG+TGG 0.554312 7.1:-56655257 MS.gene96423:CDS
AAGCAGAAAATGGGGAACCC+TGG 0.559202 7.1:-56655898 MS.gene96423:CDS
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7.1:+56656743 None:intergenic
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7.1:-56656002 MS.gene96423:CDS
AGGCAGAGTGTTTGGTGCAG+AGG 0.564913 7.1:-56654865 MS.gene96423:CDS
GAATGATCTTGATCTTGACT+TGG 0.565052 7.1:+56656573 None:intergenic
GCACTAAAGGCAGGTATGAA+GGG 0.565237 7.1:+56655203 None:intergenic
GGCCTCTGCTGCAGATGGTG+AGG 0.565284 7.1:+56655931 None:intergenic
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7.1:-56656714 MS.gene96423:CDS
AAATGGTCGTAACATTGGAT+AGG 0.569644 7.1:-56655153 MS.gene96423:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7.1:-56656717 MS.gene96423:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7.1:-56655355 MS.gene96423:CDS
AATCTCAGCAGCAGTAGCAG+TGG 0.572943 7.1:+56656344 None:intergenic
TCGATTTCGTCGTGGTGTGA+GGG 0.574007 7.1:+56655394 None:intergenic
TTAACAAATCGAAGCACTAA+AGG 0.575268 7.1:+56655190 None:intergenic
GGTAATCCGGAACACGCGCA+AGG 0.576781 7.1:-56655787 MS.gene96423:CDS
CAAATCGAAGCACTAAAGGC+AGG 0.580272 7.1:+56655194 None:intergenic
GGTATTGTTATCCTTTGCGC+CGG 0.583054 7.1:+56656668 None:intergenic
GCATTGCTTGAAGCTGTGGA+AGG 0.584725 7.1:-56655541 MS.gene96423:CDS
CGATAGCACCACCGGCGCAA+AGG 0.585841 7.1:-56656679 MS.gene96423:CDS
GTCGGCGCATCAGTTTCAGC+AGG 0.589273 7.1:-56655854 MS.gene96423:CDS
TGAAGGTAAAAGATGTGGAA+TGG 0.592491 7.1:-56656625 MS.gene96423:CDS
TGCAGCTGAGAATATGTGAA+AGG 0.595086 7.1:+56656117 None:intergenic
GCAAAGGAAGGATCTCATCT+CGG 0.596929 7.1:-56654786 MS.gene96423:CDS
AATTCTGCTTCTTCTCCACA+TGG 0.598433 7.1:+56654825 None:intergenic
AAAACCTACTCTTGTCGTCA+GGG 0.598538 7.1:-56654925 MS.gene96423:CDS
GCTTCTACCGATAGCACCAC+CGG 0.599672 7.1:-56656687 MS.gene96423:CDS
GGATAGGAGTTGTGATCGAA+CGG 0.600755 7.1:-56655137 MS.gene96423:CDS
ATGTATTCTTCAAAGGGTAA+GGG 0.603369 7.1:+56656936 None:intergenic
CAGGAGTTAGCACTCAGGAA+TGG 0.606720 7.1:-56655454 MS.gene96423:CDS
AAAATGGGGAACCCTGGAAG+CGG 0.610138 7.1:-56655892 MS.gene96423:CDS
CAAGCTGAAGGTAAAAGATG+TGG 0.613564 7.1:-56656630 MS.gene96423:CDS
AGAACCCTGACGACAAGAGT+AGG 0.620221 7.1:+56654921 None:intergenic
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7.1:+56656018 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7.1:-56655747 MS.gene96423:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7.1:-56656726 MS.gene96423:CDS
ACGCGCAAGGGATATTGGCG+CGG 0.634995 7.1:-56655774 MS.gene96423:CDS
TGGTTCATAACAAACTGATG+AGG 0.638887 7.1:+56656180 None:intergenic
TCCTGGTAGGGGATTCCATG+TGG 0.639151 7.1:-56654840 MS.gene96423:CDS
GAGTTAGCACTCAGGAATGG+TGG 0.639465 7.1:-56655451 MS.gene96423:CDS
AGAAACATACCACAAGCTGA+AGG 0.641675 7.1:-56656642 MS.gene96423:CDS
GTAATCCGGAACACGCGCAA+GGG 0.641709 7.1:-56655786 MS.gene96423:CDS
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7.1:+56655424 None:intergenic
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7.1:-56656820 MS.gene96423:CDS
GTGAAGTTACTAAACGTCAA+CGG 0.647933 7.1:+56654896 None:intergenic
ACTGCTTCGCAATCCCGTAG+TGG 0.655981 7.1:+56655262 None:intergenic
CCAGCTAAAAGACTCAATTG+TGG 0.675226 7.1:-56656066 MS.gene96423:CDS
TTATGCAGGAGTTAGCACTC+AGG 0.678645 7.1:-56655459 MS.gene96423:CDS
TGGCGCATAAGCAGAAAATG+GGG 0.679052 7.1:-56655906 MS.gene96423:CDS
AACTGAGCTCGATTTCGTCG+TGG 0.682607 7.1:+56655386 None:intergenic
GCTGCAGAACTTATAGACGC+CGG 0.689078 7.1:-56655808 MS.gene96423:CDS
TGTTTGTGTCAATGTCCACC+CGG 0.690393 7.1:-56655044 MS.gene96423:CDS
TCATCTGAAGTACATCCGGG+TGG 0.714970 7.1:+56655029 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7.1:+56656728 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATAATAGATTTTGATAT+TGG - chr7.1:56656209-56656228 MS.gene96423:CDS 15.0%
!! TTCCATATTGAAATTGATAA+TGG - chr7.1:56655161-56655180 MS.gene96423:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7.1:56655166-56655185 None:intergenic 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7.1:56656215-56656234 MS.gene96423:CDS 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7.1:56655266-56655285 MS.gene96423:CDS 20.0%
! AAGTTACCATTTGAAGAAAT+AGG + chr7.1:56655315-56655334 None:intergenic 25.0%
! AGTTACCATTTGAAGAAATA+GGG + chr7.1:56655314-56655333 None:intergenic 25.0%
! TAATTTGAGAAAGAGCAAAT+AGG + chr7.1:56656491-56656510 None:intergenic 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7.1:56654928-56654947 None:intergenic 25.0%
! TTTCCTATGTATTCTTCAAA+GGG + chr7.1:56654787-56654806 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7.1:56654787-56654806 MS.gene96423:CDS 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7.1:56655884-56655903 MS.gene96423:CDS 25.0%
!! TTTTCCTATGTATTCTTCAA+AGG + chr7.1:56654788-56654807 None:intergenic 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7.1:56654951-56654970 None:intergenic 25.0%
AAAATCATATGCTGAGGAAA+CGG + chr7.1:56656608-56656627 None:intergenic 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7.1:56655966-56655985 MS.gene96423:CDS 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7.1:56655444-56655463 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7.1:56655185-56655204 MS.gene96423:CDS 30.0%
AGCATCAACAACAATCAATT+GGG - chr7.1:56655493-56655512 MS.gene96423:CDS 30.0%
ATGTATTCTTCAAAGGGTAA+GGG + chr7.1:56654781-56654800 None:intergenic 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7.1:56655252-56655271 MS.gene96423:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7.1:56655443-56655462 None:intergenic 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7.1:56655186-56655205 MS.gene96423:CDS 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7.1:56654929-56654948 None:intergenic 30.0%
TATGTATTCTTCAAAGGGTA+AGG + chr7.1:56654782-56654801 None:intergenic 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7.1:56655584-56655603 None:intergenic 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7.1:56655390-56655409 MS.gene96423:CDS 30.0%
! TTAACAAATCGAAGCACTAA+AGG + chr7.1:56656527-56656546 None:intergenic 30.0%
! TTAAGCAAGCTTTTACAAGT+TGG - chr7.1:56655210-56655229 MS.gene96423:CDS 30.0%
! TTACCCTTTGAAGAATACAT+AGG - chr7.1:56654781-56654800 MS.gene96423:CDS 30.0%
!!! AAGGGCTGCTTTTTATTTTA+AGG - chr7.1:56656001-56656020 MS.gene96423:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG - chr7.1:56656218-56656237 MS.gene96423:CDS 30.0%
AAAACAAGCTTCTCAATTGC+CGG + chr7.1:56656731-56656750 None:intergenic 35.0%
AAAGATGTGGAATGGAAGAT+TGG - chr7.1:56655097-56655116 MS.gene96423:CDS 35.0%
AAATGGTCGTAACATTGGAT+AGG - chr7.1:56656561-56656580 MS.gene96423:CDS 35.0%
AAATTTGCAAACTGCAGAAC+AGG + chr7.1:56656140-56656159 None:intergenic 35.0%
AAGATGTGGAATGGAAGATT+GGG - chr7.1:56655098-56655117 MS.gene96423:CDS 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7.1:56656241-56656260 MS.gene96423:CDS 35.0%
AGTCTCTGAATTCTGTTTCA+TGG - chr7.1:56656423-56656442 MS.gene96423:CDS 35.0%
AGTGCAAAAATCATATGCTG+AGG + chr7.1:56656614-56656633 None:intergenic 35.0%
ATCAAGTGATTCAAGCAAAC+CGG + chr7.1:56656648-56656667 None:intergenic 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7.1:56655967-56655986 MS.gene96423:CDS 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7.1:56655965-56655984 MS.gene96423:CDS 35.0%
CAGCATCAACAACAATCAAT+TGG - chr7.1:56655492-56655511 MS.gene96423:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7.1:56655144-56655163 None:intergenic 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7.1:56655585-56655604 None:intergenic 35.0%
GTGAAGTTACTAAACGTCAA+CGG + chr7.1:56656821-56656840 None:intergenic 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7.1:56655456-56655475 MS.gene96423:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7.1:56655089-56655108 MS.gene96423:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7.1:56655537-56655556 None:intergenic 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG - chr7.1:56654872-56654891 MS.gene96423:CDS 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG - chr7.1:56654869-56654888 MS.gene96423:CDS 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7.1:56655306-56655325 MS.gene96423:CDS 35.0%
! TAAAAAGCAGCCCTTTGAAA+AGG + chr7.1:56655996-56656015 None:intergenic 35.0%
! TCCAATGTTACGACCATTTT+AGG + chr7.1:56656560-56656579 None:intergenic 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7.1:56655400-56655419 MS.gene96423:CDS 35.0%
!! GCAATTGAGAAGCTTGTTTT+GGG - chr7.1:56656731-56656750 MS.gene96423:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7.1:56654802-56654821 MS.gene96423:CDS 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG - chr7.1:56656225-56656244 MS.gene96423:CDS 35.0%
!!! GGCTGCTTTTTATTTTAAGG+AGG - chr7.1:56656004-56656023 MS.gene96423:CDS 35.0%
AAAAACCTACTCTTGTCGTC+AGG - chr7.1:56656788-56656807 MS.gene96423:CDS 40.0%
AAAACCTACTCTTGTCGTCA+GGG - chr7.1:56656789-56656808 MS.gene96423:CDS 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7.1:56655690-56655709 MS.gene96423:CDS 40.0%
AATGGCGCATAAGCAGAAAA+TGG - chr7.1:56655806-56655825 MS.gene96423:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7.1:56655683-56655702 MS.gene96423:CDS 40.0%
AATTCTGCTTCTTCTCCACA+TGG + chr7.1:56656892-56656911 None:intergenic 40.0%
AGAAACATACCACAAGCTGA+AGG - chr7.1:56655072-56655091 MS.gene96423:CDS 40.0%
AGAATTCGCTTGTCTTGTGT+TGG - chr7.1:56656906-56656925 MS.gene96423:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7.1:56654895-56654914 MS.gene96423:CDS 40.0%
ATCTCATCTCGGTTTCAACT+TGG - chr7.1:56656939-56656958 MS.gene96423:CDS 40.0%
ATGGCGCATAAGCAGAAAAT+GGG - chr7.1:56655807-56655826 MS.gene96423:CDS 40.0%
CAAGCTGAAGGTAAAAGATG+TGG - chr7.1:56655084-56655103 MS.gene96423:CDS 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7.1:56655459-56655478 MS.gene96423:CDS 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7.1:56655648-56655667 MS.gene96423:CDS 40.0%
CGAGAAATACTATCTGCAAC+CGG - chr7.1:56656709-56656728 MS.gene96423:CDS 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7.1:56655689-56655708 MS.gene96423:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7.1:56654894-56654913 MS.gene96423:CDS 40.0%
GCCTAAAATGGTCGTAACAT+TGG - chr7.1:56656556-56656575 MS.gene96423:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7.1:56655579-56655598 None:intergenic 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7.1:56655712-56655731 MS.gene96423:CDS 40.0%
GTTTATGCCTAACCCTAGTT+TGG - chr7.1:56655569-56655588 MS.gene96423:CDS 40.0%
TAAGCAGCTCATGCCTAAAA+TGG - chr7.1:56656544-56656563 MS.gene96423:CDS 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7.1:56655407-56655426 None:intergenic 40.0%
TGCAGCTGAGAATATGTGAA+AGG + chr7.1:56655600-56655619 None:intergenic 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7.1:56655408-56655427 None:intergenic 40.0%
! AACAGTTTTTGCAAAGGTGG+AGG - chr7.1:56654875-56654894 MS.gene96423:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG - chr7.1:56654876-56654895 MS.gene96423:CDS 40.0%
! AGCTTGTGGTATGTTTCTGT+TGG + chr7.1:56655070-56655089 None:intergenic 40.0%
! ATTTTCTGCTTATGCGCCAT+TGG + chr7.1:56655807-56655826 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG + chr7.1:56655084-56655103 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7.1:56655651-56655670 None:intergenic 40.0%
! GACAAGAGTAGGTTTTTCCA+AGG + chr7.1:56656785-56656804 None:intergenic 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7.1:56656359-56656378 MS.gene96423:CDS 40.0%
! GCATAAACTGAGCTTGGTTT+TGG + chr7.1:56655557-56655576 None:intergenic 40.0%
! TATGGGGAAGCCTTTTCAAA+GGG - chr7.1:56655983-56656002 MS.gene96423:CDS 40.0%
! TCGATCATCTGAAGTACATC+CGG + chr7.1:56656692-56656711 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+AGG + chr7.1:56655648-56655667 None:intergenic 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7.1:56655690-56655709 None:intergenic 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7.1:56655399-56655418 MS.gene96423:CDS 40.0%
!! GGCAATTGAGAAGCTTGTTT+TGG - chr7.1:56656730-56656749 MS.gene96423:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7.1:56654961-56654980 None:intergenic 40.0%
!! TTTGCACTCCAGTCTTATTC+CGG - chr7.1:56656626-56656645 MS.gene96423:CDS 40.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7.1:56656094-56656113 None:intergenic 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7.1:56656293-56656312 None:intergenic 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7.1:56655914-56655933 MS.gene96423:CDS 45.0%
AGCACTAAAGGCAGGTATGA+AGG + chr7.1:56656515-56656534 None:intergenic 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7.1:56656168-56656187 None:intergenic 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7.1:56656086-56656105 None:intergenic 45.0%
CAAGCAAACCGGAATAAGAC+TGG + chr7.1:56656637-56656656 None:intergenic 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7.1:56655709-56655728 MS.gene96423:CDS 45.0%
GCAAAGGAAGGATCTCATCT+CGG - chr7.1:56656928-56656947 MS.gene96423:CDS 45.0%
GCACTAAAGGCAGGTATGAA+GGG + chr7.1:56656514-56656533 None:intergenic 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7.1:56655974-56655993 None:intergenic 45.0%
GGATAGGAGTTGTGATCGAA+CGG - chr7.1:56656577-56656596 MS.gene96423:CDS 45.0%
GGTATTGTTATCCTTTGCGC+CGG + chr7.1:56655049-56655068 None:intergenic 45.0%
GGTTAGGCATAAACTGAGCT+TGG + chr7.1:56655563-56655582 None:intergenic 45.0%
TAGTAACTTCACAGAGTCGC+AGG - chr7.1:56656829-56656848 MS.gene96423:CDS 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7.1:56654988-56655007 MS.gene96423:CDS 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7.1:56655699-56655718 None:intergenic 45.0%
TGGCGCATAAGCAGAAAATG+GGG - chr7.1:56655808-56655827 MS.gene96423:CDS 45.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7.1:56654974-56654993 None:intergenic 45.0%
TGTTTGTGTCAATGTCCACC+CGG - chr7.1:56656670-56656689 MS.gene96423:CDS 45.0%
TTATGCAGGAGTTAGCACTC+AGG - chr7.1:56656255-56656274 MS.gene96423:CDS 45.0%
TTCTATCCTGCGAACCCAAA+CGG + chr7.1:56656757-56656776 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7.1:56656086-56656105 MS.gene96423:CDS 45.0%
! CAAATCGAAGCACTAAAGGC+AGG + chr7.1:56656523-56656542 None:intergenic 45.0%
! CGATCATCTGAAGTACATCC+GGG + chr7.1:56656691-56656710 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7.1:56655982-56656001 MS.gene96423:CDS 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7.1:56655984-56656003 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7.1:56654979-56654998 None:intergenic 45.0%
! TGTCTTGTGTTGGCAAAGGA+AGG - chr7.1:56656916-56656935 MS.gene96423:CDS 45.0%
!!! AAGCTTGTTTTGGGCCGTTT+GGG - chr7.1:56656740-56656759 MS.gene96423:CDS 45.0%
AAAATGGGGAACCCTGGAAG+CGG - chr7.1:56655822-56655841 MS.gene96423:CDS 50.0%
AACTGAGCTCGATTTCGTCG+TGG + chr7.1:56656331-56656350 None:intergenic 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7.1:56655816-56655835 MS.gene96423:CDS 50.0%
AATATCCCTTGCGCGTGTTC+CGG + chr7.1:56655936-56655955 None:intergenic 50.0%
AATCTCAGCAGCAGTAGCAG+TGG + chr7.1:56655373-56655392 None:intergenic 50.0%
AGAACCCTGACGACAAGAGT+AGG + chr7.1:56656796-56656815 None:intergenic 50.0%
ATTGTTATCCTTTGCGCCGG+TGG + chr7.1:56655046-56655065 None:intergenic 50.0%
CAGGAGTTAGCACTCAGGAA+TGG - chr7.1:56656260-56656279 MS.gene96423:CDS 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7.1:56656172-56656191 None:intergenic 50.0%
CGCAGGATAGAACACTTCCT+TGG - chr7.1:56656765-56656784 MS.gene96423:CDS 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7.1:56655700-56655719 None:intergenic 50.0%
GAGGCTGAAGCTGAATCTCT+TGG + chr7.1:56655629-56655648 None:intergenic 50.0%
GAGTTAGCACTCAGGAATGG+TGG - chr7.1:56656263-56656282 MS.gene96423:CDS 50.0%
GCATTGCTTGAAGCTGTGGA+AGG - chr7.1:56656173-56656192 MS.gene96423:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7.1:56655906-56655925 MS.gene96423:CDS 50.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7.1:56654989-56655008 None:intergenic 50.0%
TCGATTTCGTCGTGGTGTGA+GGG + chr7.1:56656323-56656342 None:intergenic 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7.1:56656169-56656188 MS.gene96423:CDS 50.0%
! CGCTTGTCTTGTGTTGGCAA+AGG - chr7.1:56656912-56656931 MS.gene96423:CDS 50.0%
! TCATCTGAAGTACATCCGGG+TGG + chr7.1:56656688-56656707 None:intergenic 50.0%
!! TGTTTGGTGCAGAGGATTCC+TGG - chr7.1:56656857-56656876 MS.gene96423:CDS 50.0%
!!! GAAGCTTGTTTTGGGCCGTT+TGG - chr7.1:56656739-56656758 MS.gene96423:CDS 50.0%
ACGGGATTGCGAAGCAGTTG+TGG - chr7.1:56656457-56656476 MS.gene96423:CDS 55.0%
ACTGCTTCGCAATCCCGTAG+TGG + chr7.1:56656455-56656474 None:intergenic 55.0%
CTCGATTTCGTCGTGGTGTG+AGG + chr7.1:56656324-56656343 None:intergenic 55.0%
GCTTCTACCGATAGCACCAC+CGG - chr7.1:56655027-56655046 MS.gene96423:CDS 55.0%
GGAACACGCGCAAGGGATAT+TGG - chr7.1:56655935-56655954 MS.gene96423:CDS 55.0%
GGTGCAGAGGATTCCTGGTA+GGG - chr7.1:56656862-56656881 MS.gene96423:CDS 55.0%
GTAATCCGGAACACGCGCAA+GGG - chr7.1:56655928-56655947 MS.gene96423:CDS 55.0%
GTGCAGAGGATTCCTGGTAG+GGG - chr7.1:56656863-56656882 MS.gene96423:CDS 55.0%
TCCACATGGAATCCCCTACC+AGG + chr7.1:56656878-56656897 None:intergenic 55.0%
TCCTGGTAGGGGATTCCATG+TGG - chr7.1:56656874-56656893 MS.gene96423:CDS 55.0%
TGGTGCAGAGGATTCCTGGT+AGG - chr7.1:56656861-56656880 MS.gene96423:CDS 55.0%
TTCCTCACCATCTGCAGCAG+AGG - chr7.1:56655781-56655800 MS.gene96423:CDS 55.0%
TTGCGCGTGTTCCGGATTAC+CGG + chr7.1:56655928-56655947 None:intergenic 55.0%
TTTCATGGCCGCAGCCACTA+CGG - chr7.1:56656438-56656457 MS.gene96423:CDS 55.0%
! AGAGTCGCAGGCAGAGTGTT+TGG - chr7.1:56656841-56656860 MS.gene96423:CDS 55.0%
!! AGGCAGAGTGTTTGGTGCAG+AGG - chr7.1:56656849-56656868 MS.gene96423:CDS 55.0%
ACGCGCAAGGGATATTGGCG+CGG - chr7.1:56655940-56655959 MS.gene96423:CDS 60.0%
CCATCTGCAGCAGAGGCCAA+TGG - chr7.1:56655788-56655807 MS.gene96423:CDS 60.0%
GGTAATCCGGAACACGCGCA+AGG - chr7.1:56655927-56655946 MS.gene96423:CDS 60.0%
GTCGGCGCATCAGTTTCAGC+AGG - chr7.1:56655860-56655879 MS.gene96423:CDS 60.0%
TCGCAATCCCGTAGTGGCTG+CGG + chr7.1:56656449-56656468 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7.1:56654997-56655016 MS.gene96423:CDS 60.0%
TTCATGGCCGCAGCCACTAC+GGG - chr7.1:56656439-56656458 MS.gene96423:CDS 60.0%
! CCATTGGCCTCTGCTGCAGA+TGG + chr7.1:56655791-56655810 None:intergenic 60.0%
! TTTGGGCCGTTTGGGTTCGC+AGG - chr7.1:56656748-56656767 MS.gene96423:CDS 60.0%
!! CTTTGCGCCGGTGGTGCTAT+CGG + chr7.1:56655037-56655056 None:intergenic 60.0%
ATGGGGAACCCTGGAAGCGG+TGG - chr7.1:56655825-56655844 MS.gene96423:CDS 65.0%
CGATAGCACCACCGGCGCAA+AGG - chr7.1:56655035-56655054 MS.gene96423:CDS 65.0%
GGCCTCTGCTGCAGATGGTG+AGG + chr7.1:56655786-56655805 None:intergenic 65.0%
! CGGTGGCGGCGAAGATGTGT+CGG - chr7.1:56655842-56655861 MS.gene96423:CDS 65.0%
!! ATCGGTAGAAGCGCCGCCTC+CGG + chr7.1:56655019-56655038 None:intergenic 65.0%
CTTCGCCGCCACCGCTTCCA+GGG + chr7.1:56655836-56655855 None:intergenic 70.0%
GGGAACCCTGGAAGCGGTGG+CGG - chr7.1:56655828-56655847 MS.gene96423:CDS 70.0%
TCTTCGCCGCCACCGCTTCC+AGG + chr7.1:56655837-56655856 None:intergenic 70.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7.1:56655003-56655022 MS.gene96423:CDS 70.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7.1:56655000-56655019 MS.gene96423:CDS 70.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7.1:56655004-56655023 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 56654766 56656970 56654766 ID=MS.gene96423
chr7.1 mRNA 56654766 56656970 56654766 ID=MS.gene96423.t1;Parent=MS.gene96423
chr7.1 exon 56654766 56656970 56654766 ID=MS.gene96423.t1.exon1;Parent=MS.gene96423.t1
chr7.1 CDS 56654766 56656970 56654766 ID=cds.MS.gene96423.t1;Parent=MS.gene96423.t1
Gene Sequence

>MS.gene96423

ATGAAGGCTATGCCCTTACCCTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCACAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCTACCGATAGCACCACCGGCGCAAAGGATAACAATACCAACAGAAACATACCACAAGCTGAAGGTAAAAGATGTGGAATGGAAGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACTTTGTAACTAGCATTGATTCTTCTTCTGTTGTTGCTACCACTGCTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAATTGGGTCTCTTGATGAGAAACTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAAAACCAAGAGATTCAGCTTCAGCCTCCAGCTAAAAGACTCAATTGTGGAACGAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAACAGCAACATCAGCAGCAGCTTCAATTGCTTCCTCACCATCTGCAGCAGAGGCCAATGGCGCATAAGCAGAAAATGGGGAACCCTGGAAGCGGTGGCGGCGAAGATGTGTCGGCGCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGGCTGCTTTTTATTTTAAGGAGGCATTGCAATTGCTTCTTCAATCAAATGTTAACAACAGCAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGAATTCATATAATAGATTTTGATATTGGTTTTGGTGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTCAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGACGAAATCGAGCTCAGTTTCACTAACGAGAATCTGAAGCAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAGATGCTGACACTTGAGTCTCTGAATTCTGTTTCATGGCCGCAGCCACTACGGGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCTTCATACCTGCCTTTAGTGCTTCGATTTGTTAAGCAGCTCATGCCTAAAATGGTCGTAACATTGGATAGGAGTTGTGATCGAACGGATGCACCGTTTCCTCAGCATATGATTTTTGCACTCCAGTCTTATTCCGGTTTGCTTGAATCACTTGATGCTGTTTGTGTCAATGTCCACCCGGATGTACTTCAGATGATCGAGAAATACTATCTGCAACCGGCAATTGAGAAGCTTGTTTTGGGCCGTTTGGGTTCGCAGGATAGAACACTTCCTTGGAAAAACCTACTCTTGTCGTCAGGGTTCTCTCCGTTGACGTTTAGTAACTTCACAGAGTCGCAGGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTCCATGTGGAGAAGAAGCAGAATTCGCTTGTCTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCAACTTGGAGATGCTGA
Protein sequence

>MS.gene96423.t1

MKAMPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTGAKDNNTNRNIPQAEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNGNFVTSIDSSSVVATTATAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSIGSLDEKLPHQFVMNQNQAQFMPNPSLVFPFTYSQLQENQEIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQQRPMAHKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRAAFYFKEALQLLLQSNVNNSNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAGEINMSFELEMLTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFVKQLMPKMVVTLDRSCDRTDAPFPQHMIFALQSYSGLLESLDAVCVNVHPDVLQMIEKYYLQPAIEKLVLGRLGSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC