Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97173.t1 | AFK49677.1 | 95.1 | 288 | 14 | 0 | 1 | 288 | 1 | 288 | 2.10E-135 | 492.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97173.t1 | Q14919 | 56.8 | 88 | 38 | 0 | 2 | 89 | 5 | 92 | 1.2e-22 | 109.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97173.t1 | I3TAY5 | 95.1 | 288 | 14 | 0 | 1 | 288 | 1 | 288 | 1.5e-135 | 492.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene97173.t1 | TF | NF-YC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87743 | MS.gene97173 | PPI |
| MS.gene87064 | MS.gene97173 | PPI |
| MS.gene76728 | MS.gene97173 | PPI |
| MS.gene97173 | MS.gene42075 | PPI |
| MS.gene97173 | MS.gene82237 | PPI |
| MS.gene97173 | MS.gene48819 | PPI |
| MS.gene77045 | MS.gene97173 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97173.t1 | MTR_3g012030 | 97.842 | 278 | 6 | 0 | 1 | 278 | 1 | 278 | 0.0 | 527 |
| MS.gene97173.t1 | MTR_3g012030 | 97.701 | 261 | 6 | 0 | 18 | 278 | 1 | 261 | 2.15e-176 | 491 |
| MS.gene97173.t1 | MTR_3g012030 | 97.235 | 217 | 6 | 0 | 62 | 278 | 1 | 217 | 1.44e-141 | 402 |
| MS.gene97173.t1 | MTR_8g041420 | 69.550 | 289 | 71 | 5 | 1 | 273 | 1 | 288 | 8.02e-123 | 357 |
| MS.gene97173.t1 | MTR_5g088760 | 52.685 | 298 | 103 | 8 | 1 | 273 | 1 | 285 | 3.90e-66 | 212 |
| MS.gene97173.t1 | MTR_5g088760 | 51.220 | 287 | 102 | 8 | 12 | 273 | 3 | 276 | 9.82e-58 | 190 |
| MS.gene97173.t1 | MTR_5g088760 | 50.178 | 281 | 102 | 8 | 18 | 273 | 1 | 268 | 1.76e-53 | 179 |
| MS.gene97173.t1 | MTR_5g047770 | 84.270 | 89 | 14 | 0 | 171 | 259 | 54 | 142 | 1.60e-47 | 159 |
| MS.gene97173.t1 | MTR_2g023340 | 40.449 | 89 | 50 | 1 | 1 | 86 | 75 | 163 | 6.31e-12 | 65.5 |
| MS.gene97173.t1 | MTR_3g099180 | 40.506 | 79 | 47 | 0 | 8 | 86 | 55 | 133 | 9.26e-12 | 64.3 |
| MS.gene97173.t1 | MTR_1g082660 | 39.744 | 78 | 47 | 0 | 9 | 86 | 102 | 179 | 1.07e-11 | 65.1 |
| MS.gene97173.t1 | MTR_3g099180 | 40.506 | 79 | 47 | 0 | 8 | 86 | 55 | 133 | 1.10e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97173.t1 | AT3G12480 | 51.736 | 288 | 114 | 9 | 1 | 274 | 1 | 277 | 4.44e-77 | 240 |
| MS.gene97173.t1 | AT5G19490 | 63.504 | 137 | 42 | 4 | 1 | 136 | 1 | 130 | 1.06e-50 | 171 |
| MS.gene97173.t1 | AT1G54830 | 41.026 | 78 | 46 | 0 | 9 | 86 | 71 | 148 | 4.55e-12 | 65.5 |
| MS.gene97173.t1 | AT1G54830 | 41.026 | 78 | 46 | 0 | 9 | 86 | 71 | 148 | 4.55e-12 | 65.5 |
| MS.gene97173.t1 | AT1G54830 | 41.026 | 78 | 46 | 0 | 9 | 86 | 71 | 148 | 4.55e-12 | 65.5 |
| MS.gene97173.t1 | AT5G63470 | 40.506 | 79 | 47 | 0 | 8 | 86 | 78 | 156 | 8.76e-12 | 65.1 |
| MS.gene97173.t1 | AT5G63470 | 40.506 | 79 | 47 | 0 | 8 | 86 | 78 | 156 | 8.76e-12 | 65.1 |
| MS.gene97173.t1 | AT3G48590 | 40.506 | 79 | 47 | 0 | 8 | 86 | 65 | 143 | 9.86e-12 | 64.7 |
| MS.gene97173.t1 | AT1G08970 | 41.026 | 78 | 46 | 0 | 9 | 86 | 81 | 158 | 1.00e-11 | 64.7 |
| MS.gene97173.t1 | AT1G08970 | 41.026 | 78 | 46 | 0 | 9 | 86 | 81 | 158 | 1.00e-11 | 64.7 |
| MS.gene97173.t1 | AT1G08970 | 41.026 | 78 | 46 | 0 | 9 | 86 | 81 | 158 | 1.00e-11 | 64.7 |
| MS.gene97173.t1 | AT1G08970 | 41.026 | 78 | 46 | 0 | 9 | 86 | 81 | 158 | 1.00e-11 | 64.7 |
| MS.gene97173.t1 | AT1G56170 | 41.026 | 78 | 46 | 0 | 9 | 86 | 77 | 154 | 2.08e-11 | 63.2 |
| MS.gene97173.t1 | AT1G56170 | 41.026 | 78 | 46 | 0 | 9 | 86 | 77 | 154 | 2.08e-11 | 63.2 |
Find 86 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGATGTTTCTGATAATC+AGG | 0.299184 | 3.2:-6049090 | MS.gene97173:CDS |
| AGGGGAAGAGGAAGGGGTAG+AGG | 0.303468 | 3.2:-6050529 | MS.gene97173:CDS |
| TTACAAATGCAATGCATTCA+TGG | 0.332233 | 3.2:+6051744 | None:intergenic |
| GGTATCAAGCTTCTTCTTCA+TGG | 0.333154 | 3.2:+6054514 | None:intergenic |
| AGCAACTCACAAACTAAAAC+AGG | 0.338422 | 3.2:+6051925 | None:intergenic |
| TGGACTTCGAACCTTCTCTT+TGG | 0.350657 | 3.2:+6051109 | None:intergenic |
| AGAGGCTAAGCGGAGTAAAA+TGG | 0.373594 | 3.2:-6050971 | MS.gene97173:intron |
| TGAAGACAGTGCAATCATAT+TGG | 0.375115 | 3.2:-6049021 | MS.gene97173:CDS |
| TTCTGATAATCAGGTTGAAA+AGG | 0.397944 | 3.2:-6049081 | MS.gene97173:CDS |
| TGGCATTCAGATCAATGTTT+CGG | 0.398272 | 3.2:+6050311 | None:intergenic |
| ACAAGTATGGCAATAGATAA+TGG | 0.399112 | 3.2:-6050397 | MS.gene97173:CDS |
| TTTGCTTGATCTATATACTT+AGG | 0.416364 | 3.2:+6048963 | None:intergenic |
| GTAGGAGACTTAGCAGGAAA+TGG | 0.416468 | 3.2:-6049200 | MS.gene97173:intron |
| AGAGGAAGAGGCCGCGGTCG+AGG | 0.425950 | 3.2:-6050511 | MS.gene97173:CDS |
| AGATTCAACCTGCTGATGTA+AGG | 0.427032 | 3.2:+6050465 | None:intergenic |
| AGACGTCCGCAATACAAGTA+TGG | 0.427604 | 3.2:-6050410 | MS.gene97173:CDS |
| AGAGGAAGGGGTAGAGGAAG+AGG | 0.428938 | 3.2:-6050523 | MS.gene97173:CDS |
| GCACTGTCTTCAAAGACAAC+AGG | 0.429994 | 3.2:+6049032 | None:intergenic |
| GTTTGATTACAGCTTGAGTT+GGG | 0.437970 | 3.2:-6050571 | MS.gene97173:intron |
| CCACACTGGCGGTACTGGTA+GGG | 0.444180 | 3.2:-6050548 | MS.gene97173:CDS |
| AACTAGTAAGCTATTTCTCT+TGG | 0.445646 | 3.2:+6049133 | None:intergenic |
| TTGGGCCACACTGGCGGTAC+TGG | 0.449291 | 3.2:-6050553 | MS.gene97173:CDS |
| GGCGGTACTGGTAGGGGAAG+AGG | 0.449384 | 3.2:-6050541 | MS.gene97173:CDS |
| TTGCAGCAGGCTCAGGCAAT+GGG | 0.449809 | 3.2:+6050233 | None:intergenic |
| AAAACTTACAGCAGGGAAAC+GGG | 0.451379 | 3.2:+6054493 | None:intergenic |
| ATGCAACATGAAGAAATTCC+AGG | 0.456390 | 3.2:-6050202 | MS.gene97173:CDS |
| TGTTTGATTACAGCTTGAGT+TGG | 0.458715 | 3.2:-6050572 | MS.gene97173:intron |
| ACTGGTAGGGGAAGAGGAAG+GGG | 0.463619 | 3.2:-6050535 | MS.gene97173:CDS |
| GTAGAGTTATTTCATAAGTC+CGG | 0.468953 | 3.2:+6051782 | None:intergenic |
| TGCATATCTGTTGTTGCAGC+AGG | 0.476096 | 3.2:+6050220 | None:intergenic |
| ATAGCATTGTTGATTACAGC+AGG | 0.476309 | 3.2:-6048914 | MS.gene97173:CDS |
| AGGGGTAGAGGAAGAGGCCG+CGG | 0.479703 | 3.2:-6050517 | MS.gene97173:CDS |
| TCAGGCAATGGGACCTGAGC+AGG | 0.480093 | 3.2:+6050244 | None:intergenic |
| ATCATATTGGAGAAAAGTAA+TGG | 0.480919 | 3.2:-6049008 | MS.gene97173:CDS |
| TCATATTGGAGAAAAGTAAT+GGG | 0.492064 | 3.2:-6049007 | MS.gene97173:CDS |
| TCTGATAATCAGGTTGAAAA+GGG | 0.493896 | 3.2:-6049080 | MS.gene97173:CDS |
| AAGAGAAACCTTACATCAGC+AGG | 0.497349 | 3.2:-6050473 | MS.gene97173:CDS |
| GCCACACTGGCGGTACTGGT+AGG | 0.501008 | 3.2:-6050549 | MS.gene97173:CDS |
| GGACATGGCCATTCTGAGGC+TGG | 0.501930 | 3.2:-6051151 | MS.gene97173:CDS |
| CACACTGGCGGTACTGGTAG+GGG | 0.503334 | 3.2:-6050547 | MS.gene97173:CDS |
| GTTGCAGCAGGCTCAGGCAA+TGG | 0.505204 | 3.2:+6050232 | None:intergenic |
| TTCAAAGACAACAGGGATGA+TGG | 0.505223 | 3.2:+6049040 | None:intergenic |
| TCTGTTGTTGCAGCAGGCTC+AGG | 0.507661 | 3.2:+6050226 | None:intergenic |
| GAGGAAGAGGCCGCGGTCGA+GGG | 0.509630 | 3.2:-6050510 | MS.gene97173:CDS |
| TAGGAGACTTAGCAGGAAAT+GGG | 0.512309 | 3.2:-6049199 | MS.gene97173:CDS |
| CCATGTCCGTGGCTATAGTC+AGG | 0.512389 | 3.2:+6051166 | None:intergenic |
| CTGCAGCTTGCAGCAAACCT+TGG | 0.517052 | 3.2:-6050139 | MS.gene97173:intron |
| CATCAGCGCCAGCCTCAGAA+TGG | 0.533148 | 3.2:+6051143 | None:intergenic |
| CCATCTTGTCGACATCAGAA+AGG | 0.538115 | 3.2:+6050173 | None:intergenic |
| AAGCACAGATATACCTGCTC+AGG | 0.541442 | 3.2:-6050257 | MS.gene97173:CDS |
| GGGCAACAAGAGTATAATCA+TGG | 0.547401 | 3.2:-6049179 | MS.gene97173:CDS |
| TACTGGTAGGGGAAGAGGAA+GGG | 0.550796 | 3.2:-6050536 | MS.gene97173:CDS |
| ATGCAAGCAGACGAGGATGT+TGG | 0.554702 | 3.2:-6051967 | MS.gene97173:CDS |
| CCTTTCTGATGTCGACAAGA+TGG | 0.555115 | 3.2:-6050173 | MS.gene97173:CDS |
| CAGCTTGAGTTGGGCCACAC+TGG | 0.562286 | 3.2:-6050562 | MS.gene97173:CDS |
| CATCTTGTCGACATCAGAAA+GGG | 0.562835 | 3.2:+6050174 | None:intergenic |
| AGGAAGAGGCCGCGGTCGAG+GGG | 0.567783 | 3.2:-6050509 | MS.gene97173:CDS |
| ATAATCAGGTTGAAAAGGGT+GGG | 0.570259 | 3.2:-6049076 | MS.gene97173:CDS |
| CTATTGCCATACTTGTATTG+CGG | 0.574433 | 3.2:+6050404 | None:intergenic |
| AGATAATGGTTCAGAACCAA+AGG | 0.574615 | 3.2:-6050383 | MS.gene97173:CDS |
| TTTGAGAGACATTGTCAGCA+GGG | 0.585914 | 3.2:-6051191 | MS.gene97173:CDS |
| TTGCAATGACAGCGATGAAG+AGG | 0.586083 | 3.2:-6050989 | MS.gene97173:CDS |
| GATAATCAGGTTGAAAAGGG+TGG | 0.588220 | 3.2:-6049077 | MS.gene97173:CDS |
| ACATCAGAAAGGGACCAACC+TGG | 0.595072 | 3.2:+6050184 | None:intergenic |
| AACTGTGTAGGAGACTTAGC+AGG | 0.596754 | 3.2:-6049206 | MS.gene97173:intron |
| GTACTGGTAGGGGAAGAGGA+AGG | 0.602926 | 3.2:-6050537 | MS.gene97173:CDS |
| AGAACCAAAGGAGTTATCAA+AGG | 0.605334 | 3.2:-6050371 | MS.gene97173:CDS |
| ATCGTGCTGTTCCAAAGAGA+AGG | 0.608205 | 3.2:-6051120 | MS.gene97173:intron |
| CACTGTCTTCAAAGACAACA+GGG | 0.609094 | 3.2:+6049033 | None:intergenic |
| CCACGGACATGGCCATTCTG+AGG | 0.617948 | 3.2:-6051155 | MS.gene97173:CDS |
| CCTGACTATAGCCACGGACA+TGG | 0.621947 | 3.2:-6051166 | MS.gene97173:CDS |
| GAAGATAATGCAAGCAGACG+AGG | 0.624666 | 3.2:-6051974 | MS.gene97173:CDS |
| CTTGAGTTGGGCCACACTGG+CGG | 0.626402 | 3.2:-6050559 | MS.gene97173:CDS |
| GTTTGCTGAATAGAAGTGCA+AGG | 0.627861 | 3.2:+6050439 | None:intergenic |
| AAATAGCTTACTAGTTCATG+TGG | 0.628773 | 3.2:-6049126 | MS.gene97173:CDS |
| GGATGTTGGAAAGATAGCAC+TGG | 0.629786 | 3.2:-6051953 | MS.gene97173:CDS |
| ATGTTTGCCAGGAAAGCTGC+TGG | 0.632479 | 3.2:-6051018 | MS.gene97173:intron |
| TAGCATTGTTGATTACAGCA+GGG | 0.633886 | 3.2:-6048913 | MS.gene97173:CDS |
| AGGGTTCCTGACTATAGCCA+CGG | 0.641831 | 3.2:-6051172 | MS.gene97173:CDS |
| AACATGAAGAAATTCCAGGT+TGG | 0.648140 | 3.2:-6050198 | MS.gene97173:CDS |
| CCTCAGAATGGCCATGTCCG+TGG | 0.649675 | 3.2:+6051155 | None:intergenic |
| CAGTTCGAGCCCCTCGACCG+CGG | 0.651823 | 3.2:+6050500 | None:intergenic |
| CCCTACCAGTACCGCCAGTG+TGG | 0.652289 | 3.2:+6050548 | None:intergenic |
| GCAACTCACAAACTAAAACA+GGG | 0.681922 | 3.2:+6051926 | None:intergenic |
| ACAGCGATGAAGAGGCTAAG+CGG | 0.705575 | 3.2:-6050981 | MS.gene97173:CDS |
| TATGAAATAACTCTACAGAG+AGG | 0.731792 | 3.2:-6051775 | MS.gene97173:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATAAAATAAGTGATTT+TGG | - | chr3.2:6051974-6051993 | MS.gene97173:CDS | 10.0% |
| !!! | GATTATAATTTGAAATTTAT+AGG | - | chr3.2:6049913-6049932 | MS.gene97173:intron | 10.0% |
| !!! | TTATTTCTTTGTTAAATTTT+GGG | - | chr3.2:6051523-6051542 | MS.gene97173:intron | 10.0% |
| !! | AAAAACGAAAAATAATATCT+AGG | - | chr3.2:6053686-6053705 | MS.gene97173:intron | 15.0% |
| !! | CTTAAATAGATTATTTGAAA+AGG | + | chr3.2:6051363-6051382 | None:intergenic | 15.0% |
| !!! | AATTGAGCTTTTTTTAATTT+GGG | - | chr3.2:6049044-6049063 | MS.gene97173:CDS | 15.0% |
| !!! | GTATTTTCTCAAATTATTAT+CGG | + | chr3.2:6049708-6049727 | None:intergenic | 15.0% |
| !!! | GTTATTTCTTTGTTAAATTT+TGG | - | chr3.2:6051522-6051541 | MS.gene97173:intron | 15.0% |
| !!! | TAATTGAGCTTTTTTTAATT+TGG | - | chr3.2:6049043-6049062 | MS.gene97173:CDS | 15.0% |
| !!! | TATTTTCTATATTTTTCTTG+AGG | - | chr3.2:6051713-6051732 | MS.gene97173:intron | 15.0% |
| !!! | TGAACTTTGTTTATTTATTT+GGG | - | chr3.2:6049311-6049330 | MS.gene97173:intron | 15.0% |
| !!! | TTGAACTTTGTTTATTTATT+TGG | - | chr3.2:6049310-6049329 | MS.gene97173:intron | 15.0% |
| !! | AAAAATAATATCTAGGTGAT+GGG | - | chr3.2:6053693-6053712 | MS.gene97173:intron | 20.0% |
| !! | AAAAATTGTAAGAAACTAGA+AGG | - | chr3.2:6052770-6052789 | MS.gene97173:intron | 20.0% |
| !! | AATAAAAAGATAAAAGCTAC+TGG | + | chr3.2:6052334-6052353 | None:intergenic | 20.0% |
| !! | AATAATTTAAAGACAACAGT+TGG | - | chr3.2:6053946-6053965 | MS.gene97173:intron | 20.0% |
| !! | AATCATAAATGTATTCCAAT+AGG | + | chr3.2:6050931-6050950 | None:intergenic | 20.0% |
| !! | ACTTATTTGAATTTATCTAC+TGG | + | chr3.2:6052678-6052697 | None:intergenic | 20.0% |
| !! | ATCCTTCTTAACTATAAATA+AGG | - | chr3.2:6053652-6053671 | MS.gene97173:intron | 20.0% |
| !! | GATTTAATGATTAAGAATTG+AGG | - | chr3.2:6051798-6051817 | MS.gene97173:CDS | 20.0% |
| !! | TATTGACCTAATAGAAAATT+AGG | - | chr3.2:6050028-6050047 | MS.gene97173:intron | 20.0% |
| !! | TGGAATTTAGTAAAATTCAT+AGG | - | chr3.2:6049872-6049891 | MS.gene97173:intron | 20.0% |
| !! | TGTGATAAAAAATAATGTTC+TGG | + | chr3.2:6050570-6050589 | None:intergenic | 20.0% |
| !! | TGTTACAATTAGAAAGATAT+AGG | - | chr3.2:6050361-6050380 | MS.gene97173:CDS | 20.0% |
| !! | TTAAAAACGTCTTGATTATA+AGG | - | chr3.2:6053861-6053880 | MS.gene97173:intron | 20.0% |
| !! | TTAGATTTCACAAAACTAAA+GGG | + | chr3.2:6050403-6050422 | None:intergenic | 20.0% |
| !! | TTTAGATTTCACAAAACTAA+AGG | + | chr3.2:6050404-6050423 | None:intergenic | 20.0% |
| !! | TTTGTCTGAAAAAATTTACA+AGG | - | chr3.2:6054043-6054062 | MS.gene97173:intron | 20.0% |
| !!! | ATTGTTTTCATACAAGTTAT+AGG | - | chr3.2:6052571-6052590 | MS.gene97173:intron | 20.0% |
| !!! | ATTTAGTTTCATCACTTTTT+AGG | - | chr3.2:6053465-6053484 | MS.gene97173:intron | 20.0% |
| !!! | ATTTTTTATCACAAGGTTAT+AGG | - | chr3.2:6050577-6050596 | MS.gene97173:intron | 20.0% |
| !!! | GAACATTATTTTTTATCACA+AGG | - | chr3.2:6050570-6050589 | MS.gene97173:intron | 20.0% |
| !!! | GGTGATAAATTGATAATTTA+GGG | - | chr3.2:6049070-6049089 | MS.gene97173:CDS | 20.0% |
| !!! | TAATGAAAACATTAATTTGC+AGG | - | chr3.2:6051413-6051432 | MS.gene97173:intron | 20.0% |
| !!! | TGGTGATAAATTGATAATTT+AGG | - | chr3.2:6049069-6049088 | MS.gene97173:CDS | 20.0% |
| !!! | TTCCTTATTTATAGTTAAGA+AGG | + | chr3.2:6053657-6053676 | None:intergenic | 20.0% |
| !!! | TTTAGTTTCATCACTTTTTA+GGG | - | chr3.2:6053466-6053485 | MS.gene97173:intron | 20.0% |
| !!! | TTTTATAATTCGTAACAAAC+AGG | + | chr3.2:6051964-6051983 | None:intergenic | 20.0% |
| ! | AAATAATGTAATCAGAGAGA+TGG | - | chr3.2:6050694-6050713 | MS.gene97173:intron | 25.0% |
| ! | AATACATTTATGATTACACC+CGG | - | chr3.2:6050936-6050955 | MS.gene97173:intron | 25.0% |
| ! | ACATTTGATTCCCAATTATA+AGG | + | chr3.2:6052738-6052757 | None:intergenic | 25.0% |
| ! | ATCATATTGGAGAAAAGTAA+TGG | - | chr3.2:6054412-6054431 | MS.gene97173:intron | 25.0% |
| ! | ATTAGGATAATTCAAATGGA+AGG | + | chr3.2:6050281-6050300 | None:intergenic | 25.0% |
| ! | ATTCCCAATTATAAGGTTAT+AGG | + | chr3.2:6052731-6052750 | None:intergenic | 25.0% |
| ! | CTAATTGTAACAATCACAAA+AGG | + | chr3.2:6050353-6050372 | None:intergenic | 25.0% |
| ! | CTGTAAAAAAATCAAGACTA+AGG | + | chr3.2:6051581-6051600 | None:intergenic | 25.0% |
| ! | GAAAAATAATATCTAGGTGA+TGG | - | chr3.2:6053692-6053711 | MS.gene97173:intron | 25.0% |
| ! | GTATCTTCGCAAATTATTAT+CGG | + | chr3.2:6049235-6049254 | None:intergenic | 25.0% |
| ! | GTATGTGTAACTTATACAAT+TGG | - | chr3.2:6050854-6050873 | MS.gene97173:intron | 25.0% |
| ! | TAAAAGCAGTGTATTTCATA+AGG | - | chr3.2:6052635-6052654 | MS.gene97173:intron | 25.0% |
| ! | TAAATGTATTCCAATAGGTT+TGG | + | chr3.2:6050926-6050945 | None:intergenic | 25.0% |
| ! | TAGATTTCACAAAACTAAAG+GGG | + | chr3.2:6050402-6050421 | None:intergenic | 25.0% |
| ! | TCATATTGGAGAAAAGTAAT+GGG | - | chr3.2:6054413-6054432 | MS.gene97173:intron | 25.0% |
| ! | TGATGGTTATCTTTGTAAAT+TGG | - | chr3.2:6054082-6054101 | MS.gene97173:intron | 25.0% |
| ! | TGTTAGTATCAAAATAAGTG+AGG | - | chr3.2:6050185-6050204 | MS.gene97173:CDS | 25.0% |
| ! | TTATTTCCATATGCTCATTA+GGG | + | chr3.2:6052613-6052632 | None:intergenic | 25.0% |
| ! | TTCAAGTAATTGGGATAATA+TGG | + | chr3.2:6050630-6050649 | None:intergenic | 25.0% |
| ! | TTTCATATATGGATAACTGT+AGG | + | chr3.2:6050891-6050910 | None:intergenic | 25.0% |
| ! | TTTGCTTGATCTATATACTT+AGG | + | chr3.2:6054460-6054479 | None:intergenic | 25.0% |
| !! | AAATTTTCCCAAAACTCTAT+TGG | + | chr3.2:6051932-6051951 | None:intergenic | 25.0% |
| !! | AATACTTGTTTAAGCCTTTT+TGG | - | chr3.2:6050133-6050152 | MS.gene97173:intron | 25.0% |
| !! | AATTGATAATTTAGGGTTTC+TGG | - | chr3.2:6049077-6049096 | MS.gene97173:CDS | 25.0% |
| !! | AATTTTCCCAAAACTCTATT+GGG | + | chr3.2:6051931-6051950 | None:intergenic | 25.0% |
| !! | ACCTTAAATGTAAAGCATTT+GGG | - | chr3.2:6051889-6051908 | MS.gene97173:intron | 25.0% |
| !! | ATTGATAATTTAGGGTTTCT+GGG | - | chr3.2:6049078-6049097 | MS.gene97173:CDS | 25.0% |
| !! | ATTTGGGTTTGATGATAATA+GGG | - | chr3.2:6049327-6049346 | MS.gene97173:intron | 25.0% |
| !! | CAAAGCAAACTTTTCATATA+TGG | + | chr3.2:6050902-6050921 | None:intergenic | 25.0% |
| !! | GGAATTTTTGTATGATTCAT+AGG | - | chr3.2:6049402-6049421 | MS.gene97173:intron | 25.0% |
| !! | TAAATGGATATTGTTGTTGT+AGG | - | chr3.2:6053491-6053510 | MS.gene97173:intron | 25.0% |
| !! | TATCTAAAATCTGCTTTGAA+TGG | + | chr3.2:6052118-6052137 | None:intergenic | 25.0% |
| !! | TATTTGGGTTTGATGATAAT+AGG | - | chr3.2:6049326-6049345 | MS.gene97173:intron | 25.0% |
| !! | TGTATAGGTTTTCGATAAAA+GGG | + | chr3.2:6052481-6052500 | None:intergenic | 25.0% |
| !! | TTAGGTTTGATGATAATTGA+GGG | - | chr3.2:6049576-6049595 | MS.gene97173:intron | 25.0% |
| !! | TTGTATAGGTTTTCGATAAA+AGG | + | chr3.2:6052482-6052501 | None:intergenic | 25.0% |
| !! | TTTAAGATATTGTCTGTCAA+TGG | - | chr3.2:6053588-6053607 | MS.gene97173:intron | 25.0% |
| !! | TTTTATCGAAAACCTATACA+AGG | - | chr3.2:6052481-6052500 | MS.gene97173:intron | 25.0% |
| !!! | AGCTTTTTTTAATTTGGGTT+TGG | - | chr3.2:6049049-6049068 | MS.gene97173:CDS | 25.0% |
| !!! | ATCACTTTTTAGGGTTTAAA+TGG | - | chr3.2:6053475-6053494 | MS.gene97173:intron | 25.0% |
| !!! | TTTGTGTTGTTGTTTACTAT+TGG | + | chr3.2:6053912-6053931 | None:intergenic | 25.0% |
| AAAACAACAATGAAACCAAC+TGG | + | chr3.2:6053567-6053586 | None:intergenic | 30.0% | |
| AAATAGCTTACTAGTTCATG+TGG | - | chr3.2:6054294-6054313 | MS.gene97173:intron | 30.0% | |
| AAATATTTACAAACACCTCC+AGG | - | chr3.2:6053799-6053818 | MS.gene97173:intron | 30.0% | |
| AAGCTTCACTTCAAGTAATT+GGG | + | chr3.2:6050639-6050658 | None:intergenic | 30.0% | |
| ACAAGTATGGCAATAGATAA+TGG | - | chr3.2:6053023-6053042 | MS.gene97173:intron | 30.0% | |
| ACACACAATGGTAAGTAAAT+TGG | - | chr3.2:6054105-6054124 | MS.gene97173:intron | 30.0% | |
| ACCCAAATGCTTTACATTTA+AGG | + | chr3.2:6051893-6051912 | None:intergenic | 30.0% | |
| AGCACCTATAACCTTATAAT+TGG | - | chr3.2:6052724-6052743 | MS.gene97173:intron | 30.0% | |
| ATACCAGGCAAAGAAAAAAA+GGG | + | chr3.2:6053403-6053422 | None:intergenic | 30.0% | |
| ATACTTATGCTTTCTGATTG+AGG | + | chr3.2:6053634-6053653 | None:intergenic | 30.0% | |
| ATAGGTGCTTATGAATAAAG+AGG | + | chr3.2:6052713-6052732 | None:intergenic | 30.0% | |
| CAATTGAGCTTTGCTTATTT+GGG | - | chr3.2:6049780-6049799 | MS.gene97173:intron | 30.0% | |
| CTAGTACATGATTTACTTCT+TGG | - | chr3.2:6053528-6053547 | MS.gene97173:intron | 30.0% | |
| CTTATTTCCATATGCTCATT+AGG | + | chr3.2:6052614-6052633 | None:intergenic | 30.0% | |
| CTTCTATAACCATCTTCATT+CGG | + | chr3.2:6050730-6050749 | None:intergenic | 30.0% | |
| GAGCATTAGGATAATTCAAA+TGG | + | chr3.2:6050285-6050304 | None:intergenic | 30.0% | |
| GATTTAATGCTGTAGCAAAA+TGG | - | chr3.2:6051034-6051053 | MS.gene97173:intron | 30.0% | |
| GATTTACTTCTTGGTAAAGT+TGG | - | chr3.2:6053537-6053556 | MS.gene97173:intron | 30.0% | |
| GCACCTATAACCTTATAATT+GGG | - | chr3.2:6052725-6052744 | MS.gene97173:intron | 30.0% | |
| TATAATGACATGTGTCAATG+TGG | - | chr3.2:6049509-6049528 | MS.gene97173:intron | 30.0% | |
| TATACCAGGCAAAGAAAAAA+AGG | + | chr3.2:6053404-6053423 | None:intergenic | 30.0% | |
| TATGAAATAACTCTACAGAG+AGG | - | chr3.2:6051645-6051664 | MS.gene97173:intron | 30.0% | |
| TCAATTGAGCTTTGCTTATT+TGG | - | chr3.2:6049779-6049798 | MS.gene97173:intron | 30.0% | |
| TGGGAATCAAATGTTTATCT+CGG | - | chr3.2:6052744-6052763 | MS.gene97173:intron | 30.0% | |
| TTACAAATGCAATGCATTCA+TGG | + | chr3.2:6051679-6051698 | None:intergenic | 30.0% | |
| TTTGAATTATCCTAATGCTC+TGG | - | chr3.2:6050285-6050304 | MS.gene97173:CDS | 30.0% | |
| TTTGTAAATTGGACACACAA+TGG | - | chr3.2:6054093-6054112 | MS.gene97173:intron | 30.0% | |
| ! | AAACAAGTATTGCCAAATAG+CGG | + | chr3.2:6050124-6050143 | None:intergenic | 30.0% |
| ! | AAATGGATGACTATGTTTTG+TGG | - | chr3.2:6051051-6051070 | MS.gene97173:intron | 30.0% |
| ! | ATATCTCCCAATAGAGTTTT+GGG | - | chr3.2:6051922-6051941 | MS.gene97173:intron | 30.0% |
| ! | CACCTTAAATGTAAAGCATT+TGG | - | chr3.2:6051888-6051907 | MS.gene97173:intron | 30.0% |
| ! | CACTGTCCTAATTTTCTATT+AGG | + | chr3.2:6050037-6050056 | None:intergenic | 30.0% |
| ! | CATAAAACACTTTTGCAAAG+TGG | + | chr3.2:6051010-6051029 | None:intergenic | 30.0% |
| ! | CTGAAGTCTTTTATAAGTGT+AGG | - | chr3.2:6050766-6050785 | MS.gene97173:intron | 30.0% |
| ! | CTTAGGTTTGATGATAATTG+AGG | - | chr3.2:6049575-6049594 | MS.gene97173:intron | 30.0% |
| ! | GTAGAGTTATTTCATAAGTC+CGG | + | chr3.2:6051641-6051660 | None:intergenic | 30.0% |
| ! | TACTGATGTTTCTGATAATC+AGG | - | chr3.2:6054330-6054349 | MS.gene97173:intron | 30.0% |
| ! | TATATCTCCCAATAGAGTTT+TGG | - | chr3.2:6051921-6051940 | MS.gene97173:intron | 30.0% |
| ! | TTGATGATAATAGGGTTTCT+AGG | - | chr3.2:6049335-6049354 | MS.gene97173:intron | 30.0% |
| ! | TTGGGTTTGATGATAATTGA+CGG | - | chr3.2:6049798-6049817 | MS.gene97173:intron | 30.0% |
| !! | AAAACATTAATTTGCAGGCT+CGG | - | chr3.2:6051418-6051437 | MS.gene97173:intron | 30.0% |
| !! | AAATTTGCTAGTATCTACAC+AGG | + | chr3.2:6053434-6053453 | None:intergenic | 30.0% |
| !! | AACTAGTAAGCTATTTCTCT+TGG | + | chr3.2:6054290-6054309 | None:intergenic | 30.0% |
| !! | TACGATGGGTATGTTTTATT+GGG | - | chr3.2:6050238-6050257 | MS.gene97173:CDS | 30.0% |
| !! | TCTGATAATCAGGTTGAAAA+GGG | - | chr3.2:6054340-6054359 | MS.gene97173:intron | 30.0% |
| !! | TTCTGATAATCAGGTTGAAA+AGG | - | chr3.2:6054339-6054358 | MS.gene97173:intron | 30.0% |
| !! | TTTTCCTTTGATAACTCCTT+TGG | + | chr3.2:6053056-6053075 | None:intergenic | 30.0% |
| !! | TTTTGGGAAAATTTACTGTC+GGG | - | chr3.2:6051938-6051957 | MS.gene97173:CDS | 30.0% |
| !!! | AGTGTCACAGTTTTTTATAG+CGG | - | chr3.2:6050053-6050072 | MS.gene97173:intron | 30.0% |
| !!! | GTTTTGGGAAAATTTACTGT+CGG | - | chr3.2:6051937-6051956 | MS.gene97173:CDS | 30.0% |
| AAAAACTTACAGCAGGGAAA+CGG | + | chr3.2:6048931-6048950 | None:intergenic | 35.0% | |
| AAAGCTCAATTGAAACATGC+AGG | + | chr3.2:6049772-6049791 | None:intergenic | 35.0% | |
| AACACCAGCACAAGTAAAAT+CGG | + | chr3.2:6051777-6051796 | None:intergenic | 35.0% | |
| AACATGAAGAAATTCCAGGT+TGG | - | chr3.2:6053222-6053241 | MS.gene97173:intron | 35.0% | |
| AAGCAGAAAAAACTTACAGC+AGG | + | chr3.2:6048938-6048957 | None:intergenic | 35.0% | |
| AAGTAAAATCGGTCTATGCA+TGG | + | chr3.2:6051766-6051785 | None:intergenic | 35.0% | |
| AAGTGAGGAATGCATTCATT+GGG | - | chr3.2:6050200-6050219 | MS.gene97173:CDS | 35.0% | |
| AATTTCCGATTCTCATCTCT+CGG | - | chr3.2:6051828-6051847 | MS.gene97173:intron | 35.0% | |
| AATTTGGTAAAGTGGCATGA+TGG | - | chr3.2:6049619-6049638 | MS.gene97173:intron | 35.0% | |
| AGAACCAAAGGAGTTATCAA+AGG | - | chr3.2:6053049-6053068 | MS.gene97173:intron | 35.0% | |
| AGCAACTCACAAACTAAAAC+AGG | + | chr3.2:6051498-6051517 | None:intergenic | 35.0% | |
| AGCAGAAAAAACTTACAGCA+GGG | + | chr3.2:6048937-6048956 | None:intergenic | 35.0% | |
| AGGATCGTCTAATTCACAAA+CGG | + | chr3.2:6050333-6050352 | None:intergenic | 35.0% | |
| AGGGATCATTCATTTAGCAT+CGG | + | chr3.2:6053384-6053403 | None:intergenic | 35.0% | |
| AGTACATTGGTCATTATGCT+AGG | - | chr3.2:6054003-6054022 | MS.gene97173:intron | 35.0% | |
| ATGCAACATGAAGAAATTCC+AGG | - | chr3.2:6053218-6053237 | MS.gene97173:intron | 35.0% | |
| ATGTAATCAGAGAGATGGAT+TGG | - | chr3.2:6050699-6050718 | MS.gene97173:intron | 35.0% | |
| ATTGGGTTAACATACCTCTT+TGG | - | chr3.2:6050255-6050274 | MS.gene97173:CDS | 35.0% | |
| ATTTGGTAAAGTGGCATGAT+GGG | - | chr3.2:6049620-6049639 | MS.gene97173:intron | 35.0% | |
| CAAGCTTCACTTCAAGTAAT+TGG | + | chr3.2:6050640-6050659 | None:intergenic | 35.0% | |
| CATATATGGATAACTGTAGG+AGG | + | chr3.2:6050888-6050907 | None:intergenic | 35.0% | |
| CTAAGTAACCAAAGCTCAAT+TGG | + | chr3.2:6049560-6049579 | None:intergenic | 35.0% | |
| CTATTGCCATACTTGTATTG+CGG | + | chr3.2:6053019-6053038 | None:intergenic | 35.0% | |
| GATAATATGGAAAACGTGCA+AGG | + | chr3.2:6050617-6050636 | None:intergenic | 35.0% | |
| GATATTCTGATAGAACGTGA+TGG | - | chr3.2:6054065-6054084 | MS.gene97173:intron | 35.0% | |
| GATGATAATTGACGGTTTCT+GGG | - | chr3.2:6049806-6049825 | MS.gene97173:intron | 35.0% | |
| GCAACTCACAAACTAAAACA+GGG | + | chr3.2:6051497-6051516 | None:intergenic | 35.0% | |
| GGATGAAGAAGATTATGATG+AGG | - | chr3.2:6053319-6053338 | MS.gene97173:intron | 35.0% | |
| GTTTGATTACAGCTTGAGTT+GGG | - | chr3.2:6052849-6052868 | MS.gene97173:intron | 35.0% | |
| TAAGATACATGAAACGAACC+TGG | + | chr3.2:6053820-6053839 | None:intergenic | 35.0% | |
| TAAGGTGATCAGTTCATACT+TGG | + | chr3.2:6051875-6051894 | None:intergenic | 35.0% | |
| TAAGTGAGGAATGCATTCAT+TGG | - | chr3.2:6050199-6050218 | MS.gene97173:CDS | 35.0% | |
| TCTATAGCACTATAGTGTAG+AGG | - | chr3.2:6051189-6051208 | MS.gene97173:CDS | 35.0% | |
| TGAAGAAGATTATGATGAGG+AGG | - | chr3.2:6053322-6053341 | MS.gene97173:intron | 35.0% | |
| TGAAGACAGTGCAATCATAT+TGG | - | chr3.2:6054399-6054418 | MS.gene97173:intron | 35.0% | |
| TGATGATAATTGACGGTTTC+TGG | - | chr3.2:6049805-6049824 | MS.gene97173:intron | 35.0% | |
| TGATGATAATTGAGGGTTAC+TGG | - | chr3.2:6049583-6049602 | MS.gene97173:intron | 35.0% | |
| TGCATTGCATTTGTAAGTTG+TGG | - | chr3.2:6051683-6051702 | MS.gene97173:intron | 35.0% | |
| TGGCATTCAGATCAATGTTT+CGG | + | chr3.2:6053112-6053131 | None:intergenic | 35.0% | |
| TGTTTGATTACAGCTTGAGT+TGG | - | chr3.2:6052848-6052867 | MS.gene97173:intron | 35.0% | |
| TTCCTGGCAAACATTCTTAA+CGG | + | chr3.2:6052396-6052415 | None:intergenic | 35.0% | |
| TTGCAAAGTGGAAAGAATGA+AGG | + | chr3.2:6050998-6051017 | None:intergenic | 35.0% | |
| TTGGTTAAACCGAATGAAGA+TGG | - | chr3.2:6050718-6050737 | MS.gene97173:intron | 35.0% | |
| TTTGCTTTGACCAAACCTAT+TGG | - | chr3.2:6050913-6050932 | MS.gene97173:intron | 35.0% | |
| ! | AGATAATGGTTCAGAACCAA+AGG | - | chr3.2:6053037-6053056 | MS.gene97173:intron | 35.0% |
| ! | ATAATAGGGTTTCTAGGTTG+TGG | - | chr3.2:6049341-6049360 | MS.gene97173:intron | 35.0% |
| ! | ATAGCATTGTTGATTACAGC+AGG | - | chr3.2:6054506-6054525 | MS.gene97173:CDS | 35.0% |
| ! | CAATTGAGCTTTGGTTACTT+AGG | - | chr3.2:6049558-6049577 | MS.gene97173:intron | 35.0% |
| ! | CTACGATGGGTATGTTTTAT+TGG | - | chr3.2:6050237-6050256 | MS.gene97173:CDS | 35.0% |
| ! | CTTCAAATTTCCAGAGCATT+AGG | + | chr3.2:6050298-6050317 | None:intergenic | 35.0% |
| ! | TAATAGGGTTTCTAGGTTGT+GGG | - | chr3.2:6049342-6049361 | MS.gene97173:intron | 35.0% |
| ! | TAGCATTGTTGATTACAGCA+GGG | - | chr3.2:6054507-6054526 | MS.gene97173:CDS | 35.0% |
| ! | TCACGGATTGTAGGAAATAA+CGG | + | chr3.2:6051298-6051317 | None:intergenic | 35.0% |
| ! | TTTTGCAAGATCTTTGTGAC+CGG | - | chr3.2:6051619-6051638 | MS.gene97173:intron | 35.0% |
| ! | TTTTTCTTGAGGAAACCTTC+AGG | - | chr3.2:6051724-6051743 | MS.gene97173:intron | 35.0% |
| !! | ATAAGCACTTAGCCTTGTAT+AGG | + | chr3.2:6052496-6052515 | None:intergenic | 35.0% |
| !! | ATAATCAGGTTGAAAAGGGT+GGG | - | chr3.2:6054344-6054363 | MS.gene97173:intron | 35.0% |
| !! | TAGTGGGTTATTGATAACAC+TGG | + | chr3.2:6049968-6049987 | None:intergenic | 35.0% |
| !! | TTTTTAGTCATGATCGACGA+TGG | - | chr3.2:6052818-6052837 | MS.gene97173:intron | 35.0% |
| !!! | AGAGAACACATTTTTTTCCC+CGG | - | chr3.2:6053974-6053993 | MS.gene97173:intron | 35.0% |
| !!! | TTTTTTTACAGCGAAAGCTC+TGG | - | chr3.2:6051590-6051609 | MS.gene97173:intron | 35.0% |
| AAAACTTACAGCAGGGAAAC+GGG | + | chr3.2:6048930-6048949 | None:intergenic | 40.0% | |
| AAACCAACCAAGCACCAAAA+AGG | + | chr3.2:6050150-6050169 | None:intergenic | 40.0% | |
| AACCGTTAAGAATGTTTGCC+AGG | - | chr3.2:6052391-6052410 | MS.gene97173:intron | 40.0% | |
| AAGAGAAACCTTACATCAGC+AGG | - | chr3.2:6052947-6052966 | MS.gene97173:intron | 40.0% | |
| AAGCTACCCTAATGAGCATA+TGG | - | chr3.2:6052604-6052623 | MS.gene97173:intron | 40.0% | |
| AATTGGGTAGAGTGGTATGA+TGG | - | chr3.2:6049842-6049861 | MS.gene97173:intron | 40.0% | |
| AATTGGGTGGAATGGTATGA+TGG | - | chr3.2:6049114-6049133 | MS.gene97173:CDS | 40.0% | |
| AATTTGGTAGAGTGGCATGA+TGG | - | chr3.2:6049371-6049390 | MS.gene97173:intron | 40.0% | |
| ACCAATGCTGATAACTGTGT+AGG | - | chr3.2:6054202-6054221 | MS.gene97173:intron | 40.0% | |
| ACCCAGATGCAAAAACACAA+CGG | + | chr3.2:6048993-6049012 | None:intergenic | 40.0% | |
| ACTCACATAGAGACCAATAC+CGG | - | chr3.2:6049660-6049679 | MS.gene97173:intron | 40.0% | |
| AGATTCAACCTGCTGATGTA+AGG | + | chr3.2:6052958-6052977 | None:intergenic | 40.0% | |
| AGTGAGGAATGCATTCATTG+GGG | - | chr3.2:6050201-6050220 | MS.gene97173:CDS | 40.0% | |
| ATTCAAATGGAAGGCCAAAG+AGG | + | chr3.2:6050272-6050291 | None:intergenic | 40.0% | |
| ATTGGGTAGAGTGGTATGAT+GGG | - | chr3.2:6049843-6049862 | MS.gene97173:intron | 40.0% | |
| ATTGGGTGGAATGGTATGAT+GGG | - | chr3.2:6049115-6049134 | MS.gene97173:CDS | 40.0% | |
| ATTTGGTAGAGTGGCATGAT+GGG | - | chr3.2:6049372-6049391 | MS.gene97173:intron | 40.0% | |
| CACAAACAATTCACACCTGA+AGG | + | chr3.2:6051742-6051761 | None:intergenic | 40.0% | |
| CACTGTCTTCAAAGACAACA+GGG | + | chr3.2:6054390-6054409 | None:intergenic | 40.0% | |
| CAGAACAGTGTGATTCAACA+AGG | + | chr3.2:6051122-6051141 | None:intergenic | 40.0% | |
| CAGTGGTGAACACAAATTTC+AGG | - | chr3.2:6052171-6052190 | MS.gene97173:intron | 40.0% | |
| CATCTTGTCGACATCAGAAA+GGG | + | chr3.2:6053249-6053268 | None:intergenic | 40.0% | |
| CTAGTATCTACACAGGTCAT+TGG | + | chr3.2:6053427-6053446 | None:intergenic | 40.0% | |
| CTGAAATTTGTGTTCACCAC+TGG | + | chr3.2:6052173-6052192 | None:intergenic | 40.0% | |
| GAAGAGTAGCTAACACCTTA+AGG | - | chr3.2:6053344-6053363 | MS.gene97173:intron | 40.0% | |
| GAGACATGATTTCCACCTTA+AGG | + | chr3.2:6053362-6053381 | None:intergenic | 40.0% | |
| GCACTATAGTGTAGAGGAAT+TGG | - | chr3.2:6051195-6051214 | MS.gene97173:CDS | 40.0% | |
| GCAGTTTGCATCAGAATTTG+AGG | + | chr3.2:6050461-6050480 | None:intergenic | 40.0% | |
| GGTAAAGTTGGATTACCAGT+TGG | - | chr3.2:6053549-6053568 | MS.gene97173:intron | 40.0% | |
| GGTCAACAACATGAGAGAAA+AGG | + | chr3.2:6051560-6051579 | None:intergenic | 40.0% | |
| TACATGTGTCAATGTCGTGT+CGG | - | chr3.2:6049743-6049762 | MS.gene97173:intron | 40.0% | |
| TAGGAGACTTAGCAGGAAAT+GGG | - | chr3.2:6054221-6054240 | MS.gene97173:intron | 40.0% | |
| TCATGACTAAAAACTGCAGC+AGG | + | chr3.2:6052811-6052830 | None:intergenic | 40.0% | |
| TCCTACACAGTTATCAGCAT+TGG | + | chr3.2:6054206-6054225 | None:intergenic | 40.0% | |
| TGATCAGTTCATACTTGGCA+TGG | + | chr3.2:6051870-6051889 | None:intergenic | 40.0% | |
| TGCTAGCAAAACTGGAATAG+AGG | - | chr3.2:6050001-6050020 | MS.gene97173:intron | 40.0% | |
| TTATGATTACACCCGGAGTT+CGG | - | chr3.2:6050943-6050962 | MS.gene97173:intron | 40.0% | |
| TTCAAAGACAACAGGGATGA+TGG | + | chr3.2:6054383-6054402 | None:intergenic | 40.0% | |
| TTTGACCGAGAGATGAGAAT+CGG | + | chr3.2:6051836-6051855 | None:intergenic | 40.0% | |
| TTTGAGAGACATTGTCAGCA+GGG | - | chr3.2:6052229-6052248 | MS.gene97173:intron | 40.0% | |
| ! | AATAGGGTTTCTAGGTTGTG+GGG | - | chr3.2:6049343-6049362 | MS.gene97173:intron | 40.0% |
| ! | AATTGAGGGTTACTGGTTGT+GGG | - | chr3.2:6049590-6049609 | MS.gene97173:intron | 40.0% |
| ! | AATTTAGGGTTTCTGGGTTG+CGG | - | chr3.2:6049084-6049103 | MS.gene97173:CDS | 40.0% |
| ! | ATTGACGGTTTCTGGGTTAT+CGG | - | chr3.2:6049813-6049832 | MS.gene97173:intron | 40.0% |
| ! | GGGCAACAAGAGTATAATCA+TGG | - | chr3.2:6054241-6054260 | MS.gene97173:intron | 40.0% |
| ! | GTCTTCGTTTTCATGCAAGT+TGG | + | chr3.2:6053132-6053151 | None:intergenic | 40.0% |
| ! | GTTTGCTGAATAGAAGTGCA+AGG | + | chr3.2:6052984-6053003 | None:intergenic | 40.0% |
| ! | TAATTGAGGGTTACTGGTTG+TGG | - | chr3.2:6049589-6049608 | MS.gene97173:intron | 40.0% |
| ! | TACACAGTTATCAGCATTGG+TGG | + | chr3.2:6054203-6054222 | None:intergenic | 40.0% |
| ! | TGTTGTCAATCACGGATTGT+AGG | + | chr3.2:6051307-6051326 | None:intergenic | 40.0% |
| ! | TTGCAGCAAACCTTGGTAAT+AGG | - | chr3.2:6053288-6053307 | MS.gene97173:intron | 40.0% |
| !! | GATAATCAGGTTGAAAAGGG+TGG | - | chr3.2:6054343-6054362 | MS.gene97173:intron | 40.0% |
| !! | TAGACCGATTTTACTTGTGC+TGG | - | chr3.2:6051770-6051789 | MS.gene97173:CDS | 40.0% |
| !! | TTTTGAGAGACATTGTCAGC+AGG | - | chr3.2:6052228-6052247 | MS.gene97173:intron | 40.0% |
| !!! | GATCCCTTTTTTTCTTTGCC+TGG | - | chr3.2:6053397-6053416 | MS.gene97173:intron | 40.0% |
| !!! | GTTTAAGCCTTTTTGGTGCT+TGG | - | chr3.2:6050140-6050159 | MS.gene97173:CDS | 40.0% |
| !!! | TTTTGGTGCTTGGTTGGTTT+GGG | - | chr3.2:6050150-6050169 | MS.gene97173:CDS | 40.0% |
| !!! | TTTTTGGTGCTTGGTTGGTT+TGG | - | chr3.2:6050149-6050168 | MS.gene97173:CDS | 40.0% |
| AACTGTGTAGGAGACTTAGC+AGG | - | chr3.2:6054214-6054233 | MS.gene97173:intron | 45.0% | |
| AAGCACAGATATACCTGCTC+AGG | - | chr3.2:6053163-6053182 | MS.gene97173:intron | 45.0% | |
| ACACAGGTCATTGGTATACC+AGG | + | chr3.2:6053418-6053437 | None:intergenic | 45.0% | |
| ACCATGACGCTATAGCATAC+AGG | + | chr3.2:6050091-6050110 | None:intergenic | 45.0% | |
| AGACGTCCGCAATACAAGTA+TGG | - | chr3.2:6053010-6053029 | MS.gene97173:intron | 45.0% | |
| AGAGGCTAAGCGGAGTAAAA+TGG | - | chr3.2:6052449-6052468 | MS.gene97173:intron | 45.0% | |
| AGCAGATGTAGCGACAATAG+TGG | + | chr3.2:6049985-6050004 | None:intergenic | 45.0% | |
| CACTGTTCTGCTTAGCCAAT+AGG | - | chr3.2:6051132-6051151 | MS.gene97173:CDS | 45.0% | |
| CCATCTTGTCGACATCAGAA+AGG | + | chr3.2:6053250-6053269 | None:intergenic | 45.0% | |
| CCTCATCTAGCCTATTACCA+AGG | + | chr3.2:6053301-6053320 | None:intergenic | 45.0% | |
| CCTTTCTGATGTCGACAAGA+TGG | - | chr3.2:6053247-6053266 | MS.gene97173:intron | 45.0% | |
| CGATGTATTAGTGTCGTGAC+CGG | + | chr3.2:6049466-6049485 | None:intergenic | 45.0% | |
| CGTGATTGACAACACTCAGT+GGG | - | chr3.2:6051313-6051332 | MS.gene97173:intron | 45.0% | |
| GAAGATAATGCAAGCAGACG+AGG | - | chr3.2:6051446-6051465 | MS.gene97173:intron | 45.0% | |
| GACAACACTTCCACTCCTAT+TGG | + | chr3.2:6051150-6051169 | None:intergenic | 45.0% | |
| GACATGTGCCAATTGAGCTT+TGG | - | chr3.2:6049549-6049568 | MS.gene97173:intron | 45.0% | |
| GACATGTGTCAATGTGGTGT+TGG | - | chr3.2:6049515-6049534 | MS.gene97173:intron | 45.0% | |
| GAGTAGCTAACACCTTAAGG+TGG | - | chr3.2:6053347-6053366 | MS.gene97173:intron | 45.0% | |
| GATACATGAAACGAACCTGG+AGG | + | chr3.2:6053817-6053836 | None:intergenic | 45.0% | |
| GCACTGTCTTCAAAGACAAC+AGG | + | chr3.2:6054391-6054410 | None:intergenic | 45.0% | |
| GCAGATGTAGCGACAATAGT+GGG | + | chr3.2:6049984-6050003 | None:intergenic | 45.0% | |
| GCTACATCTGCTAGCAAAAC+TGG | - | chr3.2:6049993-6050012 | MS.gene97173:intron | 45.0% | |
| GGATGTTGGAAAGATAGCAC+TGG | - | chr3.2:6051467-6051486 | MS.gene97173:intron | 45.0% | |
| GGGGTGTGAATTTGGTAAAG+TGG | - | chr3.2:6049611-6049630 | MS.gene97173:intron | 45.0% | |
| GTAGGAGACTTAGCAGGAAA+TGG | - | chr3.2:6054220-6054239 | MS.gene97173:intron | 45.0% | |
| GTCAGTGTCGTGTTGGATAT+TGG | - | chr3.2:6049277-6049296 | MS.gene97173:intron | 45.0% | |
| GTGATTGACAACACTCAGTG+GGG | - | chr3.2:6051314-6051333 | MS.gene97173:intron | 45.0% | |
| GTTAACCAAAACCCGAACTC+CGG | + | chr3.2:6050958-6050977 | None:intergenic | 45.0% | |
| TACATGTGTCAGTGTCGTGT+TGG | - | chr3.2:6049270-6049289 | MS.gene97173:intron | 45.0% | |
| TATGATTACACCCGGAGTTC+GGG | - | chr3.2:6050944-6050963 | MS.gene97173:intron | 45.0% | |
| TCCTGTATGCTATAGCGTCA+TGG | - | chr3.2:6050087-6050106 | MS.gene97173:intron | 45.0% | |
| TCTCATCTCTCGGTCAAAGA+CGG | - | chr3.2:6051838-6051857 | MS.gene97173:intron | 45.0% | |
| TGACCAATGTACTCTTCCTC+CGG | + | chr3.2:6053996-6054015 | None:intergenic | 45.0% | |
| TGATTGACAACACTCAGTGG+GGG | - | chr3.2:6051315-6051334 | MS.gene97173:intron | 45.0% | |
| TGGACTTCGAACCTTCTCTT+TGG | + | chr3.2:6052314-6052333 | None:intergenic | 45.0% | |
| TGTGAGCTTAGTCTAACCAG+TGG | - | chr3.2:6052154-6052173 | MS.gene97173:intron | 45.0% | |
| TTAACCAAAACCCGAACTCC+GGG | + | chr3.2:6050957-6050976 | None:intergenic | 45.0% | |
| TTCTGCTTAGCCAATAGGAG+TGG | - | chr3.2:6051137-6051156 | MS.gene97173:CDS | 45.0% | |
| TTGCAATGACAGCGATGAAG+AGG | - | chr3.2:6052431-6052450 | MS.gene97173:intron | 45.0% | |
| ! | ATAGGGTTTCTAGGTTGTGG+GGG | - | chr3.2:6049344-6049363 | MS.gene97173:intron | 45.0% |
| ! | ATCGTGCTGTTCCAAAGAGA+AGG | - | chr3.2:6052300-6052319 | MS.gene97173:intron | 45.0% |
| ! | ATTGAGGGTTACTGGTTGTG+GGG | - | chr3.2:6049591-6049610 | MS.gene97173:intron | 45.0% |
| ! | ATTTAGGGTTTCTGGGTTGC+GGG | - | chr3.2:6049085-6049104 | MS.gene97173:CDS | 45.0% |
| ! | CAATGTGTGAGTGTTGTGAC+CGG | + | chr3.2:6049682-6049701 | None:intergenic | 45.0% |
| ! | CCACTGAGTGTTGTCAATCA+CGG | + | chr3.2:6051315-6051334 | None:intergenic | 45.0% |
| ! | CCTTGGTAATAGGCTAGATG+AGG | - | chr3.2:6053298-6053317 | MS.gene97173:intron | 45.0% |
| ! | TTGACGGTTTCTGGGTTATC+GGG | - | chr3.2:6049814-6049833 | MS.gene97173:intron | 45.0% |
| !! | AATGGTATGATGGGTGTGAC+TGG | - | chr3.2:6049124-6049143 | MS.gene97173:CDS | 45.0% |
| !! | AGTGGTATGATGGGTTTGAC+TGG | - | chr3.2:6049852-6049871 | MS.gene97173:intron | 45.0% |
| !! | GCCGTTGTGTTTTTGCATCT+GGG | - | chr3.2:6048989-6049008 | MS.gene97173:CDS | 45.0% |
| !! | GTGGAAGTGTTGTCAAACAG+TGG | - | chr3.2:6051156-6051175 | MS.gene97173:CDS | 45.0% |
| !! | TGCCGTTGTGTTTTTGCATC+TGG | - | chr3.2:6048988-6049007 | MS.gene97173:CDS | 45.0% |
| !! | TTTGGTGCTTGGTTGGTTTG+GGG | - | chr3.2:6050151-6050170 | MS.gene97173:CDS | 45.0% |
| !!! | AAGCCTTTTTGGTGCTTGGT+TGG | - | chr3.2:6050144-6050163 | MS.gene97173:CDS | 45.0% |
| !!! | GAACACATTTTTTTCCCCGG+AGG | - | chr3.2:6053977-6053996 | MS.gene97173:intron | 45.0% |
| ACAGCGATGAAGAGGCTAAG+CGG | - | chr3.2:6052439-6052458 | MS.gene97173:intron | 50.0% | |
| ACATCAGAAAGGGACCAACC+TGG | + | chr3.2:6053239-6053258 | None:intergenic | 50.0% | |
| ACCAATGTACTCTTCCTCCG+GGG | + | chr3.2:6053994-6054013 | None:intergenic | 50.0% | |
| AGGGTTCCTGACTATAGCCA+CGG | - | chr3.2:6052248-6052267 | MS.gene97173:intron | 50.0% | |
| ATCATCACCAGCAGCTTTCC+TGG | + | chr3.2:6052412-6052431 | None:intergenic | 50.0% | |
| ATGCAAGCAGACGAGGATGT+TGG | - | chr3.2:6051453-6051472 | MS.gene97173:intron | 50.0% | |
| ATGTTTGCCAGGAAAGCTGC+TGG | - | chr3.2:6052402-6052421 | MS.gene97173:intron | 50.0% | |
| ATTAGTGTCGTGACCGGTGT+CGG | + | chr3.2:6049460-6049479 | None:intergenic | 50.0% | |
| CCGTGATTGACAACACTCAG+TGG | - | chr3.2:6051312-6051331 | MS.gene97173:intron | 50.0% | |
| CGATGTGTCAGTGTTGTGAC+CGG | + | chr3.2:6049209-6049228 | None:intergenic | 50.0% | |
| CTGCTGTTGAGCTCTACGAT+GGG | - | chr3.2:6050224-6050243 | MS.gene97173:CDS | 50.0% | |
| GACCAATGTACTCTTCCTCC+GGG | + | chr3.2:6053995-6054014 | None:intergenic | 50.0% | |
| GGGGTGTGAATTTGGTAGAG+TGG | - | chr3.2:6049363-6049382 | MS.gene97173:intron | 50.0% | |
| GGGTTATCGGGGTGTGAATT+GGG | - | chr3.2:6049826-6049845 | MS.gene97173:intron | 50.0% | |
| TACTGGTAGGGGAAGAGGAA+GGG | - | chr3.2:6052884-6052903 | MS.gene97173:intron | 50.0% | |
| TGGGTTATCGGGGTGTGAAT+TGG | - | chr3.2:6049825-6049844 | MS.gene97173:intron | 50.0% | |
| TTGCCAAATAGCGGCGATAG+CGG | + | chr3.2:6050115-6050134 | None:intergenic | 50.0% | |
| ! | AGGTTGTGGGGGTGTGAATT+TGG | - | chr3.2:6049355-6049374 | MS.gene97173:intron | 50.0% |
| ! | GTGAGTGTTGTGACCGGTAT+TGG | + | chr3.2:6049676-6049695 | None:intergenic | 50.0% |
| ! | TGACGGTTTCTGGGTTATCG+GGG | - | chr3.2:6049815-6049834 | MS.gene97173:intron | 50.0% |
| ! | TGGTTGTGGGGGTGTGAATT+TGG | - | chr3.2:6049603-6049622 | MS.gene97173:intron | 50.0% |
| ! | TTGAGGGTTACTGGTTGTGG+GGG | - | chr3.2:6049592-6049611 | MS.gene97173:intron | 50.0% |
| ! | TTTAGGGTTTCTGGGTTGCG+GGG | - | chr3.2:6049086-6049105 | MS.gene97173:CDS | 50.0% |
| !! | AGTGGCATGATGGGTATGAC+TGG | - | chr3.2:6049381-6049400 | MS.gene97173:intron | 50.0% |
| !! | AGTGGCATGATGGGTGTGAT+TGG | - | chr3.2:6049629-6049648 | MS.gene97173:intron | 50.0% |
| ACTGGTAGGGGAAGAGGAAG+GGG | - | chr3.2:6052885-6052904 | MS.gene97173:intron | 55.0% | |
| AGAGGAAGGGGTAGAGGAAG+AGG | - | chr3.2:6052897-6052916 | MS.gene97173:intron | 55.0% | |
| CCATGTCCGTGGCTATAGTC+AGG | + | chr3.2:6052257-6052276 | None:intergenic | 55.0% | |
| CCTGACTATAGCCACGGACA+TGG | - | chr3.2:6052254-6052273 | MS.gene97173:intron | 55.0% | |
| CTGCAGCTTGCAGCAAACCT+TGG | - | chr3.2:6053281-6053300 | MS.gene97173:intron | 55.0% | |
| GCTCACATAGACACCGACAC+CGG | - | chr3.2:6049444-6049463 | MS.gene97173:intron | 55.0% | |
| GCTGCTGTTGAGCTCTACGA+TGG | - | chr3.2:6050223-6050242 | MS.gene97173:CDS | 55.0% | |
| GGGGTGTGAATTGGGTAGAG+TGG | - | chr3.2:6049834-6049853 | MS.gene97173:intron | 55.0% | |
| GGGGTGTGAATTGGGTGGAA+TGG | - | chr3.2:6049106-6049125 | MS.gene97173:CDS | 55.0% | |
| GTCAGTGTTGTGACCGGTGT+CGG | + | chr3.2:6049203-6049222 | None:intergenic | 55.0% | |
| ! | GTACTGGTAGGGGAAGAGGA+AGG | - | chr3.2:6052883-6052902 | MS.gene97173:intron | 55.0% |
| ! | TCCCCGGAGGAAGAGTACAT+TGG | - | chr3.2:6053990-6054009 | MS.gene97173:intron | 55.0% |
| ! | TTAGGGTTTCTGGGTTGCGG+GGG | - | chr3.2:6049087-6049106 | MS.gene97173:CDS | 55.0% |
| !! | TACACCCGGAGTTCGGGTTT+TGG | - | chr3.2:6050950-6050969 | MS.gene97173:intron | 55.0% |
| AGGGGAAGAGGAAGGGGTAG+AGG | - | chr3.2:6052891-6052910 | MS.gene97173:intron | 60.0% | |
| CATCAGCGCCAGCCTCAGAA+TGG | + | chr3.2:6052280-6052299 | None:intergenic | 60.0% | |
| CCACGGACATGGCCATTCTG+AGG | - | chr3.2:6052265-6052284 | MS.gene97173:intron | 60.0% | |
| CCTCAGAATGGCCATGTCCG+TGG | + | chr3.2:6052268-6052287 | None:intergenic | 60.0% | |
| GCTCACGTAGACACCGACAC+CGG | - | chr3.2:6049187-6049206 | MS.gene97173:CDS | 60.0% | |
| TCAGGCAATGGGACCTGAGC+AGG | + | chr3.2:6053179-6053198 | None:intergenic | 60.0% | |
| ! | GGGTTGCGGGGGTGTGAATT+GGG | - | chr3.2:6049098-6049117 | MS.gene97173:CDS | 60.0% |
| ! | GTGCCGCTATCGCCGCTATT+TGG | - | chr3.2:6050109-6050128 | MS.gene97173:intron | 60.0% |
| ! | TGGGTTGCGGGGGTGTGAAT+TGG | - | chr3.2:6049097-6049116 | MS.gene97173:CDS | 60.0% |
| ! | TTGCGGGGGTGTGAATTGGG+TGG | - | chr3.2:6049101-6049120 | MS.gene97173:CDS | 60.0% |
| !! | CACACTGGCGGTACTGGTAG+GGG | - | chr3.2:6052873-6052892 | MS.gene97173:intron | 60.0% |
| !! | CAGCTTGAGTTGGGCCACAC+TGG | - | chr3.2:6052858-6052877 | MS.gene97173:intron | 60.0% |
| !! | CCACACTGGCGGTACTGGTA+GGG | - | chr3.2:6052872-6052891 | MS.gene97173:intron | 60.0% |
| !! | CTTGAGTTGGGCCACACTGG+CGG | - | chr3.2:6052861-6052880 | MS.gene97173:intron | 60.0% |
| !! | GGACATGGCCATTCTGAGGC+TGG | - | chr3.2:6052269-6052288 | MS.gene97173:intron | 60.0% |
| AGGGGTAGAGGAAGAGGCCG+CGG | - | chr3.2:6052903-6052922 | MS.gene97173:intron | 65.0% | |
| CCCTACCAGTACCGCCAGTG+TGG | + | chr3.2:6052875-6052894 | None:intergenic | 65.0% | |
| TTGGGCCACACTGGCGGTAC+TGG | - | chr3.2:6052867-6052886 | MS.gene97173:intron | 65.0% | |
| !! | GCCACACTGGCGGTACTGGT+AGG | - | chr3.2:6052871-6052890 | MS.gene97173:intron | 65.0% |
| !! | GGCGGTACTGGTAGGGGAAG+AGG | - | chr3.2:6052879-6052898 | MS.gene97173:intron | 65.0% |
| AGAGGAAGAGGCCGCGGTCG+AGG | - | chr3.2:6052909-6052928 | MS.gene97173:intron | 70.0% | |
| AGGAAGAGGCCGCGGTCGAG+GGG | - | chr3.2:6052911-6052930 | MS.gene97173:intron | 70.0% | |
| CAGTTCGAGCCCCTCGACCG+CGG | + | chr3.2:6052923-6052942 | None:intergenic | 70.0% | |
| GAGGAAGAGGCCGCGGTCGA+GGG | - | chr3.2:6052910-6052929 | MS.gene97173:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 6048908 | 6054534 | 6048908 | ID=MS.gene97173 |
| chr3.2 | mRNA | 6048908 | 6054534 | 6048908 | ID=MS.gene97173.t1;Parent=MS.gene97173 |
| chr3.2 | exon | 6054502 | 6054534 | 6054502 | ID=MS.gene97173.t1.exon1;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6054502 | 6054534 | 6054502 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| chr3.2 | exon | 6051935 | 6052007 | 6051935 | ID=MS.gene97173.t1.exon2;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6051935 | 6052007 | 6051935 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| chr3.2 | exon | 6051748 | 6051841 | 6051748 | ID=MS.gene97173.t1.exon3;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6051748 | 6051841 | 6051748 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| chr3.2 | exon | 6051121 | 6051249 | 6051121 | ID=MS.gene97173.t1.exon4;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6051121 | 6051249 | 6051121 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| chr3.2 | exon | 6050972 | 6051029 | 6050972 | ID=MS.gene97173.t1.exon5;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6050972 | 6051029 | 6050972 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| chr3.2 | exon | 6050140 | 6050581 | 6050140 | ID=MS.gene97173.t1.exon6;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6050140 | 6050581 | 6050140 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| chr3.2 | exon | 6048908 | 6049218 | 6048908 | ID=MS.gene97173.t1.exon7;Parent=MS.gene97173.t1 |
| chr3.2 | CDS | 6048908 | 6049218 | 6048908 | ID=cds.MS.gene97173.t1;Parent=MS.gene97173.t1 |
| Gene Sequence |
| Protein sequence |
