Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98299.t1 | XP_013460933.1 | 89.7 | 417 | 40 | 1 | 1 | 417 | 1 | 414 | 6.90E-217 | 763.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98299.t1 | Q68FP5 | 38.8 | 273 | 146 | 4 | 2 | 273 | 23 | 275 | 5.1e-43 | 176.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98299.t1 | A0A072UZJ7 | 89.7 | 417 | 40 | 1 | 1 | 417 | 1 | 414 | 5.0e-217 | 763.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22289 | MS.gene98299 | PPI |
| MS.gene024701 | MS.gene98299 | PPI |
| MS.gene21679 | MS.gene98299 | PPI |
| MS.gene21951 | MS.gene98299 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98299.t1 | MTR_3g074980 | 94.245 | 417 | 21 | 2 | 1 | 417 | 1 | 414 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98299.t1 | AT4G24880 | 64.133 | 421 | 139 | 4 | 1 | 415 | 1 | 415 | 0.0 | 568 |
| MS.gene98299.t1 | AT4G24880 | 65.282 | 337 | 106 | 3 | 1 | 331 | 1 | 332 | 1.24e-163 | 464 |
Find 114 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTTTAGTTCCAGTTTA+TGG | 0.130864 | 3.1:-61324676 | MS.gene98299:CDS |
| CTTTCCAAACCAGGTGGTTT+TGG | 0.139058 | 3.1:-61323107 | MS.gene98299:intron |
| CGGTTTCAGGTTCGGGAGTT+TGG | 0.153915 | 3.1:+61325916 | None:intergenic |
| CTTCTGAATTCAGGTTCTTT+TGG | 0.158903 | 3.1:-61324762 | MS.gene98299:CDS |
| TGGAGTTCCGGTTCGGTTTC+AGG | 0.160693 | 3.1:+61325903 | None:intergenic |
| GACGATCCTCCTTTGGTATT+TGG | 0.178884 | 3.1:-61323052 | MS.gene98299:CDS |
| ACTTAGATTTGATGATCTTT+TGG | 0.228621 | 3.1:-61320892 | MS.gene98299:CDS |
| GCTTATCGTTGTTCCATTAC+TGG | 0.239378 | 3.1:+61325598 | None:intergenic |
| ATGATTGTACTTCTGAATTC+AGG | 0.254101 | 3.1:-61324771 | MS.gene98299:CDS |
| AACTTACTACGTTATTGATA+TGG | 0.264664 | 3.1:-61324818 | MS.gene98299:CDS |
| TCCGGTTCGGTTTCAGGTTC+GGG | 0.266835 | 3.1:+61325909 | None:intergenic |
| TCGGGTTGGGGTTGGAGTTC+CGG | 0.267657 | 3.1:+61325891 | None:intergenic |
| TTGCAAGACCTTCTGGAAAA+AGG | 0.304113 | 3.1:-61325634 | MS.gene98299:CDS |
| ATTCTGATGTGGTTCGGGTT+GGG | 0.310675 | 3.1:+61325878 | None:intergenic |
| TCCTTTGGTATTTGGCTGTT+TGG | 0.311832 | 3.1:-61323044 | MS.gene98299:CDS |
| TCCTTTGTTCTTGCTCCGTT+TGG | 0.321806 | 3.1:+61325530 | None:intergenic |
| TTCCGGTTCGGTTTCAGGTT+CGG | 0.329834 | 3.1:+61325908 | None:intergenic |
| GCTCCGTTTGGCAATTTAGA+AGG | 0.332034 | 3.1:+61325542 | None:intergenic |
| TCGTCATTCTGATGTGGTTC+GGG | 0.352587 | 3.1:+61325873 | None:intergenic |
| TTCGTCATTCTGATGTGGTT+CGG | 0.356306 | 3.1:+61325872 | None:intergenic |
| TTCTGATGTGGTTCGGGTTG+GGG | 0.359746 | 3.1:+61325879 | None:intergenic |
| CTCCAATTGCAAACCGTAGA+AGG | 0.370502 | 3.1:+61322491 | None:intergenic |
| TTCGGGATGCATGAGTTGTT+TGG | 0.375775 | 3.1:+61325794 | None:intergenic |
| TTACGCCGTTAGCATTAGTT+TGG | 0.386696 | 3.1:-61324287 | MS.gene98299:CDS |
| GGGAGTGTCGAACACTATAT+TGG | 0.391542 | 3.1:+61320916 | None:intergenic |
| TACCTTCTACGGTTTGCAAT+TGG | 0.391797 | 3.1:-61322493 | MS.gene98299:CDS |
| GGTTTCAGGTTCGGGAGTTT+GGG | 0.393642 | 3.1:+61325917 | None:intergenic |
| AGGAATATCGATCATCCATT+CGG | 0.395922 | 3.1:+61325776 | None:intergenic |
| CTCTGATCACAACCATAAAC+TGG | 0.400900 | 3.1:+61324664 | None:intergenic |
| AAGGCGCTGAAGCTCGAATA+TGG | 0.401411 | 3.1:-61325821 | MS.gene98299:CDS |
| AACTCTAAGCTTGCTGAAAC+CGG | 0.402317 | 3.1:-61324736 | MS.gene98299:CDS |
| CGCTGCTGATAGTTTCTCTA+AGG | 0.405302 | 3.1:-61322389 | MS.gene98299:intron |
| GGTCTACTTTCTTGATCTGC+TGG | 0.409750 | 3.1:+61320855 | None:intergenic |
| TGCACTCAGGGTACCTTCTA+CGG | 0.414316 | 3.1:-61322504 | MS.gene98299:CDS |
| CTGAAAATCTCACCAATGAT+TGG | 0.417671 | 3.1:-61325755 | MS.gene98299:intron |
| AAAGCTGATCTACGGTATCT+TGG | 0.419268 | 3.1:-61322433 | MS.gene98299:CDS |
| CATTCTGATGTGGTTCGGGT+TGG | 0.422805 | 3.1:+61325877 | None:intergenic |
| GAGACTAAAGGGCGCTTGAA+TGG | 0.424890 | 3.1:+61326053 | None:intergenic |
| GATGTGGTTCGGGTTGGGGT+TGG | 0.426758 | 3.1:+61325883 | None:intergenic |
| AAACTGCAGTCAATATGTTA+TGG | 0.427633 | 3.1:-61324256 | MS.gene98299:CDS |
| AGAGTAAGAATTTGAAGAAC+CGG | 0.432662 | 3.1:+61325499 | None:intergenic |
| CACCTGCGACGATCCTCCTT+TGG | 0.436144 | 3.1:-61323059 | MS.gene98299:CDS |
| GAAAACACCTGCTGTTGGTT+AGG | 0.438848 | 3.1:+61324210 | None:intergenic |
| AAAAGAAAATTACCAATCAT+TGG | 0.442547 | 3.1:+61325743 | None:intergenic |
| ACGATAAGCCGTTTGAGAAA+CGG | 0.443992 | 3.1:-61325584 | MS.gene98299:CDS |
| ACGTTATTGATATGGTTTGT+TGG | 0.445699 | 3.1:-61324810 | MS.gene98299:CDS |
| TGCAATTGGAGAGGGAGGAT+TGG | 0.456735 | 3.1:-61322479 | MS.gene98299:CDS |
| TTGTCTGCGTCGCTCTTGAT+CGG | 0.458152 | 3.1:+61326031 | None:intergenic |
| TTGGGGTTGGAGTTCCGGTT+CGG | 0.458396 | 3.1:+61325896 | None:intergenic |
| GAATTGAACCGTTTCTCAAA+CGG | 0.461223 | 3.1:+61325576 | None:intergenic |
| GGACGGAAGCTTCATGCAGC+AGG | 0.467201 | 3.1:-61323023 | MS.gene98299:intron |
| GGAATATCGATCATCCATTC+GGG | 0.471213 | 3.1:+61325777 | None:intergenic |
| AGCAGCGGCACGAGCTCGAT+TGG | 0.471276 | 3.1:+61322405 | None:intergenic |
| CGCTCTTGATCGGAGACTAA+AGG | 0.480262 | 3.1:+61326041 | None:intergenic |
| CCTTAGGCATGCACATTACC+AGG | 0.482412 | 3.1:-61324316 | MS.gene98299:intron |
| TCCCGAACCTGAAACCGAAC+CGG | 0.485257 | 3.1:-61325910 | MS.gene98299:CDS |
| CGGAGATCGTGCGGCGCCAT+GGG | 0.487792 | 3.1:+61326080 | None:intergenic |
| GCTCTTGATCGGAGACTAAA+GGG | 0.489934 | 3.1:+61326042 | None:intergenic |
| TTGGCAATTTAGAAGGAAAA+CGG | 0.498723 | 3.1:+61325549 | None:intergenic |
| CGAGGCGATTCTGTGCTTGA+CGG | 0.500346 | 3.1:+61325997 | None:intergenic |
| AGAAGACCGTCTTTGACATA+AGG | 0.503368 | 3.1:+61324610 | None:intergenic |
| GCCGTTAGCATTAGTTTGGA+AGG | 0.509100 | 3.1:-61324283 | MS.gene98299:CDS |
| GGCATGCACATTACCAGGCT+GGG | 0.511928 | 3.1:-61324311 | MS.gene98299:CDS |
| AGGCATGCACATTACCAGGC+TGG | 0.517727 | 3.1:-61324312 | MS.gene98299:CDS |
| AGGTTCGGGAGTTTGGGAAG+AGG | 0.518462 | 3.1:+61325923 | None:intergenic |
| TTGGTATTTGGCTGTTTGGA+CGG | 0.526548 | 3.1:-61323040 | MS.gene98299:CDS |
| TTCGGGAGTTTGGGAAGAGG+AGG | 0.527111 | 3.1:+61325926 | None:intergenic |
| CGAAGGAGGGTCAAAGGCAC+CGG | 0.531623 | 3.1:+61324717 | None:intergenic |
| AAAGATCATCAAATCTAAGT+GGG | 0.541300 | 3.1:+61320895 | None:intergenic |
| TGCAGTCAGATCTGCACTCA+GGG | 0.541927 | 3.1:-61322516 | MS.gene98299:intron |
| TTGCAGTCAGATCTGCACTC+AGG | 0.544181 | 3.1:-61322517 | MS.gene98299:intron |
| CTAAAGGGCGCTTGAATGGA+CGG | 0.548057 | 3.1:+61326057 | None:intergenic |
| CTACGGTTTGCAATTGGAGA+GGG | 0.548982 | 3.1:-61322487 | MS.gene98299:CDS |
| AGAGGAGGAGAGAGAGAATG+CGG | 0.550078 | 3.1:+61325941 | None:intergenic |
| CGGTTTGCAATTGGAGAGGG+AGG | 0.551117 | 3.1:-61322484 | MS.gene98299:CDS |
| TTTCCTTCTAAATTGCCAAA+CGG | 0.551675 | 3.1:-61325545 | MS.gene98299:CDS |
| GGAGGAGAGAGAGAATGCGG+TGG | 0.552403 | 3.1:+61325944 | None:intergenic |
| AAAAGATCATCAAATCTAAG+TGG | 0.556674 | 3.1:+61320894 | None:intergenic |
| CTAGAAGCTTCGAAGCTGAA+AGG | 0.568030 | 3.1:-61325840 | MS.gene98299:CDS |
| TACCAAAGGAGGATCGTCGC+AGG | 0.578997 | 3.1:+61323057 | None:intergenic |
| ATTCAGAAGTACAATCATAG+AGG | 0.580789 | 3.1:+61324776 | None:intergenic |
| ATAATACGAAGGAGGGTCAA+AGG | 0.582756 | 3.1:+61324711 | None:intergenic |
| AACAACTCATGCATCCCGAA+TGG | 0.584444 | 3.1:-61325791 | MS.gene98299:CDS |
| ATTGATATGGTTTGTTGGCG+TGG | 0.585196 | 3.1:-61324805 | MS.gene98299:CDS |
| TAGACCATGCGACATTGAGA+TGG | 0.588277 | 3.1:-61320838 | MS.gene98299:CDS |
| TCCTTCCAAACTAATGCTAA+CGG | 0.590429 | 3.1:+61324282 | None:intergenic |
| ACAAGTTCCTAACCAACAGC+AGG | 0.594991 | 3.1:-61324217 | MS.gene98299:intron |
| AATGGACGGCGGAGATCGTG+CGG | 0.599780 | 3.1:+61326071 | None:intergenic |
| TACTTATGATAATACGAAGG+AGG | 0.607857 | 3.1:+61324703 | None:intergenic |
| TTCAGAAGTACAATCATAGA+GGG | 0.608465 | 3.1:+61324777 | None:intergenic |
| ACTTATGATAATACGAAGGA+GGG | 0.609161 | 3.1:+61324704 | None:intergenic |
| TCGAGTTCGTCATTCTGATG+TGG | 0.609764 | 3.1:+61325867 | None:intergenic |
| TGATCTACGGTATCTTGGCA+AGG | 0.611765 | 3.1:-61322428 | MS.gene98299:CDS |
| TCTACGGTTTGCAATTGGAG+AGG | 0.611987 | 3.1:-61322488 | MS.gene98299:CDS |
| AATGAGAAAACACCTGCTGT+TGG | 0.612899 | 3.1:+61324205 | None:intergenic |
| AGAACAAAGGATGTTAACTC+CGG | 0.619861 | 3.1:-61325518 | MS.gene98299:CDS |
| CCATCCATCTCAATGTCGCA+TGG | 0.621943 | 3.1:+61320834 | None:intergenic |
| AAACAGCCAAATACCAAAGG+AGG | 0.633701 | 3.1:+61323046 | None:intergenic |
| TCCAAACAGCCAAATACCAA+AGG | 0.635259 | 3.1:+61323043 | None:intergenic |
| CCGTCTTTGACATAAGGCAC+AGG | 0.636086 | 3.1:+61324616 | None:intergenic |
| GCCAAACGGAGCAAGAACAA+AGG | 0.638380 | 3.1:-61325531 | MS.gene98299:CDS |
| GTTATGGACACAGACAGTAA+AGG | 0.638985 | 3.1:-61324240 | MS.gene98299:CDS |
| CTAACGGCGTAATCCCAGCC+TGG | 0.640007 | 3.1:+61324298 | None:intergenic |
| GAGCGTGGCGTTGAGCGTCG+AGG | 0.640208 | 3.1:+61325979 | None:intergenic |
| GTTTATGGTTGTGATCAGAG+TGG | 0.641110 | 3.1:-61324661 | MS.gene98299:CDS |
| CCATGCGACATTGAGATGGA+TGG | 0.649190 | 3.1:-61320834 | MS.gene98299:CDS |
| TGGAAGCTAAGAAGCGAGCG+TGG | 0.655970 | 3.1:+61325964 | None:intergenic |
| CCTGTGCCTTATGTCAAAGA+CGG | 0.659746 | 3.1:-61324616 | MS.gene98299:CDS |
| CAAAGGAGGATCGTCGCAGG+TGG | 0.668481 | 3.1:+61323060 | None:intergenic |
| AAGATCATCAAATCTAAGTG+GGG | 0.672476 | 3.1:+61320896 | None:intergenic |
| CTTAGAGAAACTATCAGCAG+CGG | 0.691380 | 3.1:+61322390 | None:intergenic |
| TTTGACATAAGGCACAGGTG+CGG | 0.707161 | 3.1:+61324621 | None:intergenic |
| CTATACTTATGATAATACGA+AGG | 0.719944 | 3.1:+61324700 | None:intergenic |
| AAGGGCGCTTGAATGGACGG+CGG | 0.768147 | 3.1:+61326060 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAAACTATTTG+TGG | - | chr3.1:61323291-61323310 | MS.gene98299:intron | 10.0% |
| !! | AATGGAAATAATCATAATAA+TGG | + | chr3.1:61322913-61322932 | None:intergenic | 15.0% |
| !! | ATGGAAATAATCATAATAAT+GGG | + | chr3.1:61322912-61322931 | None:intergenic | 15.0% |
| !! | ATGTAAGATTATATAAAATG+TGG | + | chr3.1:61323997-61324016 | None:intergenic | 15.0% |
| !! | ATTAAAATTTGTGTTATGTT+TGG | - | chr3.1:61321497-61321516 | MS.gene98299:intron | 15.0% |
| !! | TATGAATTAAGTTATTTGTT+TGG | - | chr3.1:61322028-61322047 | MS.gene98299:intron | 15.0% |
| !! | TTAATAATGAAAATGAAAAC+AGG | + | chr3.1:61323417-61323436 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAGTGAAAAT+AGG | - | chr3.1:61323513-61323532 | MS.gene98299:intron | 15.0% |
| !!! | AAATATCATTTCAAACATTT+TGG | + | chr3.1:61322383-61322402 | None:intergenic | 15.0% |
| !!! | TGGTTTTTAAAAAAAAACAA+GGG | + | chr3.1:61325618-61325637 | None:intergenic | 15.0% |
| !!! | TTGGTTTTTAAAAAAAAACA+AGG | + | chr3.1:61325619-61325638 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTTTAAAAACCA+AGG | - | chr3.1:61325618-61325637 | MS.gene98299:CDS | 15.0% |
| !!! | TTTTTGCAAAATTATTATAG+TGG | - | chr3.1:61321571-61321590 | MS.gene98299:intron | 15.0% |
| !! | AAAACAAAATAAAAACGATG+TGG | - | chr3.1:61323485-61323504 | MS.gene98299:intron | 20.0% |
| !! | AAAAGAAAATTACCAATCAT+TGG | + | chr3.1:61321167-61321186 | None:intergenic | 20.0% |
| !! | AATAAGATTAAAACAGCTTA+TGG | - | chr3.1:61321773-61321792 | MS.gene98299:intron | 20.0% |
| !! | AGATTAAAAACAGAACAAAT+AGG | + | chr3.1:61324830-61324849 | None:intergenic | 20.0% |
| !! | ATCAGAAAAAAAATTCAGAA+CGG | + | chr3.1:61323933-61323952 | None:intergenic | 20.0% |
| !! | TAATCATTTGAAAAACTGTT+TGG | + | chr3.1:61321828-61321847 | None:intergenic | 20.0% |
| !! | TCTGAAAGATTAAGAATATT+GGG | + | chr3.1:61322467-61322486 | None:intergenic | 20.0% |
| !! | TTAAAAGTGAAAATAGGAAA+TGG | - | chr3.1:61323519-61323538 | MS.gene98299:intron | 20.0% |
| !! | TTATATGAAATGCATTACAT+TGG | - | chr3.1:61324791-61324810 | MS.gene98299:CDS | 20.0% |
| !! | TTTCATGAATAATCATTGTT+TGG | - | chr3.1:61324900-61324919 | MS.gene98299:intron | 20.0% |
| !!! | ATAATCTTACATGTTTTTCT+AGG | - | chr3.1:61324005-61324024 | MS.gene98299:intron | 20.0% |
| !!! | TAATCCAAACATACATTTTT+AGG | - | chr3.1:61321612-61321631 | MS.gene98299:intron | 20.0% |
| !!! | TGTTTTATTAATCAGTTTTC+TGG | - | chr3.1:61323777-61323796 | MS.gene98299:intron | 20.0% |
| !!! | TTCTGAAAGATTAAGAATAT+TGG | + | chr3.1:61322468-61322487 | None:intergenic | 20.0% |
| !!! | TTTTAAAAACTATTTGTGGA+GGG | - | chr3.1:61323295-61323314 | MS.gene98299:intron | 20.0% |
| !!! | TTTTGAATTTCTGAATTTTC+AGG | - | chr3.1:61321243-61321262 | MS.gene98299:intron | 20.0% |
| !!! | TTTTTAAAAACTATTTGTGG+AGG | - | chr3.1:61323294-61323313 | MS.gene98299:intron | 20.0% |
| ! | AAAAGATCATCAAATCTAAG+TGG | + | chr3.1:61325898-61325917 | None:intergenic | 25.0% |
| ! | AAAATTATTCATGAACAGAC+TGG | + | chr3.1:61322415-61322434 | None:intergenic | 25.0% |
| ! | AAAGATCATCAAATCTAAGT+GGG | + | chr3.1:61325897-61325916 | None:intergenic | 25.0% |
| ! | AAAGCCTAAAAATGTATGTT+TGG | + | chr3.1:61321619-61321638 | None:intergenic | 25.0% |
| ! | AAATTATGATGGTCAGAATT+CGG | - | chr3.1:61323243-61323262 | MS.gene98299:intron | 25.0% |
| ! | AACTTACTACGTTATTGATA+TGG | - | chr3.1:61322089-61322108 | MS.gene98299:intron | 25.0% |
| ! | ATATACACACAGTGATAAAA+TGG | + | chr3.1:61322743-61322762 | None:intergenic | 25.0% |
| ! | ATGAATAATCATTGTTTGGT+TGG | - | chr3.1:61324904-61324923 | MS.gene98299:intron | 25.0% |
| ! | ATGTTAGATCTAACTTCTAA+GGG | + | chr3.1:61323575-61323594 | None:intergenic | 25.0% |
| ! | CCACAAAAACAACAAAAATA+AGG | - | chr3.1:61325281-61325300 | MS.gene98299:intron | 25.0% |
| ! | CTATACTTATGATAATACGA+AGG | + | chr3.1:61322210-61322229 | None:intergenic | 25.0% |
| ! | GAAAGTTAGATTAGATTTCT+TGG | + | chr3.1:61324365-61324384 | None:intergenic | 25.0% |
| ! | GAACTTTAATTATCATTCTC+AGG | + | chr3.1:61324695-61324714 | None:intergenic | 25.0% |
| ! | GCATAATCTTGAAATTATGA+TGG | - | chr3.1:61323232-61323251 | MS.gene98299:intron | 25.0% |
| ! | GGTTAAATATTAGATGACAA+CGG | - | chr3.1:61323017-61323036 | MS.gene98299:intron | 25.0% |
| ! | TCGTAAAAGTTATGAAATAG+CGG | + | chr3.1:61325018-61325037 | None:intergenic | 25.0% |
| ! | TTACAACAGTAACAATGTAA+AGG | - | chr3.1:61323359-61323378 | MS.gene98299:intron | 25.0% |
| ! | TTGATCATAGTAGTTAATAG+CGG | - | chr3.1:61324931-61324950 | MS.gene98299:intron | 25.0% |
| ! | TTTAGTAGATTTCTATACCT+TGG | - | chr3.1:61322783-61322802 | MS.gene98299:intron | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | - | chr3.1:61325653-61325672 | MS.gene98299:intron | 25.0% |
| !!! | ACTTAGATTTGATGATCTTT+TGG | - | chr3.1:61325897-61325916 | MS.gene98299:CDS | 25.0% |
| !!! | CCTTATTTTTGTTGTTTTTG+TGG | + | chr3.1:61325284-61325303 | None:intergenic | 25.0% |
| !!! | CTTAGATTTGATGATCTTTT+GGG | - | chr3.1:61325898-61325917 | MS.gene98299:CDS | 25.0% |
| !!! | TCATTTCAAACATTTTGGAA+TGG | + | chr3.1:61322378-61322397 | None:intergenic | 25.0% |
| !!! | TGTTTGGATTAGCATATTTT+TGG | - | chr3.1:61323104-61323123 | MS.gene98299:intron | 25.0% |
| AAAACCAGAGTAGTTAATAG+CGG | + | chr3.1:61325812-61325831 | None:intergenic | 30.0% | |
| AAACTGCAGTCAATATGTTA+TGG | - | chr3.1:61322651-61322670 | MS.gene98299:intron | 30.0% | |
| AAATGATCAAAGAAGCAACA+AGG | + | chr3.1:61324723-61324742 | None:intergenic | 30.0% | |
| AACGCATTTCTCTCAAAAAA+CGG | + | chr3.1:61325505-61325524 | None:intergenic | 30.0% | |
| AACTTATGGTTTAAGGGATT+AGG | - | chr3.1:61321522-61321541 | MS.gene98299:intron | 30.0% | |
| AACTTGAAAAAGCTGATCTA+CGG | - | chr3.1:61324466-61324485 | MS.gene98299:intron | 30.0% | |
| AAGAGCCTAACAAGTTAAAA+AGG | + | chr3.1:61322535-61322554 | None:intergenic | 30.0% | |
| AAGATCATCAAATCTAAGTG+GGG | + | chr3.1:61325896-61325915 | None:intergenic | 30.0% | |
| ACTTAATTCATATACACCGT+CGG | + | chr3.1:61322020-61322039 | None:intergenic | 30.0% | |
| ACTTATGATAATACGAAGGA+GGG | + | chr3.1:61322206-61322225 | None:intergenic | 30.0% | |
| ACTTATGGTTTAAGGGATTA+GGG | - | chr3.1:61321523-61321542 | MS.gene98299:intron | 30.0% | |
| ACTTGATAGAACATGTCAAA+TGG | + | chr3.1:61322931-61322950 | None:intergenic | 30.0% | |
| AGAGAGAAACTGAAGTTATT+AGG | - | chr3.1:61325569-61325588 | MS.gene98299:CDS | 30.0% | |
| AGAGCCTAACAAGTTAAAAA+GGG | + | chr3.1:61322534-61322553 | None:intergenic | 30.0% | |
| AGAGTAAGAATTTGAAGAAC+CGG | + | chr3.1:61321411-61321430 | None:intergenic | 30.0% | |
| ATGAAAATAGTGTGACTGAT+GGG | + | chr3.1:61324886-61324905 | None:intergenic | 30.0% | |
| ATGATTGTACTTCTGAATTC+AGG | - | chr3.1:61322136-61322155 | MS.gene98299:intron | 30.0% | |
| ATGTATAAATGTCTGACAAG+GGG | + | chr3.1:61322850-61322869 | None:intergenic | 30.0% | |
| CATGTTAGATCTAACTTCTA+AGG | + | chr3.1:61323576-61323595 | None:intergenic | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | + | chr3.1:61325551-61325570 | None:intergenic | 30.0% | |
| GAGAAGTAAGATTTCTTACT+GGG | - | chr3.1:61324046-61324065 | MS.gene98299:intron | 30.0% | |
| GAGAGAAACTGAAGTTATTA+GGG | - | chr3.1:61325570-61325589 | MS.gene98299:CDS | 30.0% | |
| GATGTATAAATGTCTGACAA+GGG | + | chr3.1:61322851-61322870 | None:intergenic | 30.0% | |
| GCTTGGCAATTTAATATCAT+TGG | + | chr3.1:61325157-61325176 | None:intergenic | 30.0% | |
| GGCAATTTAATATCATTGGA+AGG | + | chr3.1:61325153-61325172 | None:intergenic | 30.0% | |
| GGCGAAAATTAAATGAATCA+TGG | + | chr3.1:61324601-61324620 | None:intergenic | 30.0% | |
| TAACTAATAATGCCAAGTCT+TGG | - | chr3.1:61322499-61322518 | MS.gene98299:CDS | 30.0% | |
| TACTTATGATAATACGAAGG+AGG | + | chr3.1:61322207-61322226 | None:intergenic | 30.0% | |
| TGAGAAGTAAGATTTCTTAC+TGG | - | chr3.1:61324045-61324064 | MS.gene98299:intron | 30.0% | |
| TGATGCTTAATCTAGTTATG+AGG | - | chr3.1:61323949-61323968 | MS.gene98299:intron | 30.0% | |
| TGATGTATAAATGTCTGACA+AGG | + | chr3.1:61322852-61322871 | None:intergenic | 30.0% | |
| TGTTTATGAACAAAACAGAG+AGG | - | chr3.1:61325353-61325372 | MS.gene98299:intron | 30.0% | |
| TTACTGTGATTTCTGTGATA+AGG | + | chr3.1:61325108-61325127 | None:intergenic | 30.0% | |
| TTCATAGCACTTCAGTATAT+TGG | + | chr3.1:61324138-61324157 | None:intergenic | 30.0% | |
| TTCTTAGTAAGAGAAATGCT+AGG | + | chr3.1:61324303-61324322 | None:intergenic | 30.0% | |
| TTGACACATGAATGAATTTG+TGG | + | chr3.1:61323706-61323725 | None:intergenic | 30.0% | |
| TTGGCAATTTAGAAGGAAAA+CGG | + | chr3.1:61321361-61321380 | None:intergenic | 30.0% | |
| TTGGTGAACTTATGGTTTAA+GGG | - | chr3.1:61321516-61321535 | MS.gene98299:intron | 30.0% | |
| TTTCCTTCTAAATTGCCAAA+CGG | - | chr3.1:61321362-61321381 | MS.gene98299:intron | 30.0% | |
| TTTGGTGAACTTATGGTTTA+AGG | - | chr3.1:61321515-61321534 | MS.gene98299:intron | 30.0% | |
| ! | ACGTTATTGATATGGTTTGT+TGG | - | chr3.1:61322097-61322116 | MS.gene98299:intron | 30.0% |
| ! | AGAAGTTTTCTTCAGACAAA+CGG | + | chr3.1:61324859-61324878 | None:intergenic | 30.0% |
| ! | ATTCAGAAGTACAATCATAG+AGG | + | chr3.1:61322134-61322153 | None:intergenic | 30.0% |
| ! | GACTCAATACAACTTTAAAG+AGG | - | chr3.1:61323672-61323691 | MS.gene98299:intron | 30.0% |
| ! | TGTTATGTTTGGTGAACTTA+TGG | - | chr3.1:61321508-61321527 | MS.gene98299:intron | 30.0% |
| ! | TTCAGAAGTACAATCATAGA+GGG | + | chr3.1:61322133-61322152 | None:intergenic | 30.0% |
| ! | TTCAGTTTAGTTCCAGTTTA+TGG | - | chr3.1:61322231-61322250 | MS.gene98299:intron | 30.0% |
| !! | GTTAGATTTTTGGATACAGT+AGG | - | chr3.1:61324766-61324785 | MS.gene98299:CDS | 30.0% |
| !! | TGATAGTTTCTCTAAGGTAA+GGG | - | chr3.1:61324524-61324543 | MS.gene98299:intron | 30.0% |
| !! | TTCTGAATTCAGGTTCTTTT+GGG | - | chr3.1:61322146-61322165 | MS.gene98299:intron | 30.0% |
| !! | TTTTGAGAGAAATGCGTTTT+GGG | - | chr3.1:61325507-61325526 | MS.gene98299:CDS | 30.0% |
| !! | TTTTTGAGAGAAATGCGTTT+TGG | - | chr3.1:61325506-61325525 | MS.gene98299:CDS | 30.0% |
| !!! | AACTTGTTAGGCTCTTATTT+TGG | - | chr3.1:61322539-61322558 | MS.gene98299:intron | 30.0% |
| !!! | ACTTGTTAGGCTCTTATTTT+GGG | - | chr3.1:61322540-61322559 | MS.gene98299:intron | 30.0% |
| !!! | CTTTTTTTTGCAAGAAGCTT+CGG | + | chr3.1:61323145-61323164 | None:intergenic | 30.0% |
| !!! | TGTTTTTTTGCAATAACAGC+AGG | - | chr3.1:61322062-61322081 | MS.gene98299:intron | 30.0% |
| !!! | TTTCCCCTTTTTAACTTGTT+AGG | - | chr3.1:61322527-61322546 | MS.gene98299:intron | 30.0% |
| AAATCTAACCAATCTCGTGA+CGG | + | chr3.1:61324755-61324774 | None:intergenic | 35.0% | |
| AAGACACCAATTGGGAATTA+CGG | + | chr3.1:61325057-61325076 | None:intergenic | 35.0% | |
| ACTCTAATACTCACTCTCAT+TGG | - | chr3.1:61324173-61324192 | MS.gene98299:intron | 35.0% | |
| AGAAAATAGTAGTCACCTCA+TGG | + | chr3.1:61321451-61321470 | None:intergenic | 35.0% | |
| AGAACAAAGGATGTTAACTC+CGG | - | chr3.1:61321389-61321408 | MS.gene98299:intron | 35.0% | |
| AGAGCAATAAGACACCAATT+GGG | + | chr3.1:61325065-61325084 | None:intergenic | 35.0% | |
| AGGAATATCGATCATCCATT+CGG | + | chr3.1:61321134-61321153 | None:intergenic | 35.0% | |
| AGTGAAATATGCAGTGTGTT+TGG | - | chr3.1:61323088-61323107 | MS.gene98299:CDS | 35.0% | |
| ATAGAGGATGAACAAAACAG+AGG | - | chr3.1:61325318-61325337 | MS.gene98299:intron | 35.0% | |
| ATGTTCTATCAAGTTTCCAG+AGG | - | chr3.1:61322937-61322956 | MS.gene98299:intron | 35.0% | |
| CACTATATTGGAACATAACC+TGG | + | chr3.1:61325864-61325883 | None:intergenic | 35.0% | |
| CATCTCTAGTGATTCTATGA+AGG | - | chr3.1:61323210-61323229 | MS.gene98299:intron | 35.0% | |
| CATGAAAATAGTGTGACTGA+TGG | + | chr3.1:61324887-61324906 | None:intergenic | 35.0% | |
| CTAACACTCACTCTTCTATT+GGG | + | chr3.1:61324270-61324289 | None:intergenic | 35.0% | |
| CTATTGGGTTAAACACATGT+GGG | + | chr3.1:61324255-61324274 | None:intergenic | 35.0% | |
| CTCTAATACTCACTCTCATT+GGG | - | chr3.1:61324174-61324193 | MS.gene98299:intron | 35.0% | |
| CTGAAAATCTCACCAATGAT+TGG | - | chr3.1:61321152-61321171 | MS.gene98299:intron | 35.0% | |
| GAATTGAACCGTTTCTCAAA+CGG | + | chr3.1:61321334-61321353 | None:intergenic | 35.0% | |
| GAGCCTAACAAGTTAAAAAG+GGG | + | chr3.1:61322533-61322552 | None:intergenic | 35.0% | |
| TAAGACGAGATGCAGATAAA+GGG | + | chr3.1:61321889-61321908 | None:intergenic | 35.0% | |
| TACAAGCAAGCAATGTTTCA+TGG | - | chr3.1:61322996-61323015 | MS.gene98299:intron | 35.0% | |
| TAGAGCAATAAGACACCAAT+TGG | + | chr3.1:61325066-61325085 | None:intergenic | 35.0% | |
| TCATTGGGTGAAATTCATGT+GGG | - | chr3.1:61324189-61324208 | MS.gene98299:intron | 35.0% | |
| TCCTTCCAAACTAATGCTAA+CGG | + | chr3.1:61322628-61322647 | None:intergenic | 35.0% | |
| TCTATTGGGTTAAACACATG+TGG | + | chr3.1:61324256-61324275 | None:intergenic | 35.0% | |
| TGAAAATACAAGAGTCTCCT+TGG | + | chr3.1:61325638-61325657 | None:intergenic | 35.0% | |
| TTGAAACTGTGTACAACTTG+AGG | - | chr3.1:61323326-61323345 | MS.gene98299:intron | 35.0% | |
| TTGGAATGGCATTCACATAT+TGG | + | chr3.1:61322364-61322383 | None:intergenic | 35.0% | |
| ! | AACAGGATGCAGATACTTTT+AGG | + | chr3.1:61324566-61324585 | None:intergenic | 35.0% |
| ! | ACAAAACACCTTTTTCCAGA+AGG | + | chr3.1:61321284-61321303 | None:intergenic | 35.0% |
| ! | ACAGGATGCAGATACTTTTA+GGG | + | chr3.1:61324565-61324584 | None:intergenic | 35.0% |
| ! | CAATCATTGGTGAGATTTTC+AGG | + | chr3.1:61321154-61321173 | None:intergenic | 35.0% |
| ! | TGTTTTGTGGTTTCCAGTAA+TGG | - | chr3.1:61321296-61321315 | MS.gene98299:intron | 35.0% |
| ! | TTTGAGAGAAATGCGTTTTG+GGG | - | chr3.1:61325508-61325527 | MS.gene98299:CDS | 35.0% |
| !! | CACGAGATTGGTTAGATTTT+TGG | - | chr3.1:61324756-61324775 | MS.gene98299:CDS | 35.0% |
| !! | CTGATAGTTTCTCTAAGGTA+AGG | - | chr3.1:61324523-61324542 | MS.gene98299:intron | 35.0% |
| !! | CTTCTGAATTCAGGTTCTTT+TGG | - | chr3.1:61322145-61322164 | MS.gene98299:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr3.1:61324938-61324957 | MS.gene98299:intron | 35.0% |
| !!! | ATTTGTTATTTTCCCCCCTT+AGG | - | chr3.1:61322575-61322594 | MS.gene98299:intron | 35.0% |
| !!! | TTCTGGAAAAAGGTGTTTTG+TGG | - | chr3.1:61321283-61321302 | MS.gene98299:intron | 35.0% |
| !!! | TTTGTTTTTGCAAGACCTTC+TGG | - | chr3.1:61321266-61321285 | MS.gene98299:intron | 35.0% |
| AAACAGCCAAATACCAAAGG+AGG | + | chr3.1:61323864-61323883 | None:intergenic | 40.0% | |
| AAAGCTGATCTACGGTATCT+TGG | - | chr3.1:61324474-61324493 | MS.gene98299:intron | 40.0% | |
| AATGAGAAAACACCTGCTGT+TGG | + | chr3.1:61322705-61322724 | None:intergenic | 40.0% | |
| ACGATAAGCCGTTTGAGAAA+CGG | - | chr3.1:61321323-61321342 | MS.gene98299:intron | 40.0% | |
| AGAAGACCGTCTTTGACATA+AGG | + | chr3.1:61322300-61322319 | None:intergenic | 40.0% | |
| AGACACCAATTGGGAATTAC+GGG | + | chr3.1:61325056-61325075 | None:intergenic | 40.0% | |
| AGCAATGTCGAGATTATCAC+CGG | - | chr3.1:61325174-61325193 | MS.gene98299:intron | 40.0% | |
| AGCCAAATCTTAGCATGCAA+TGG | + | chr3.1:61324622-61324641 | None:intergenic | 40.0% | |
| ATAATACGAAGGAGGGTCAA+AGG | + | chr3.1:61322199-61322218 | None:intergenic | 40.0% | |
| CAAGAAGTCGAGCAAAAACA+AGG | + | chr3.1:61323454-61323473 | None:intergenic | 40.0% | |
| CATGAATGAATTTGTGGACC+TGG | + | chr3.1:61323700-61323719 | None:intergenic | 40.0% | |
| CATTGCTTGCTTGTACACTA+CGG | + | chr3.1:61322991-61323010 | None:intergenic | 40.0% | |
| CATTTCTCCATCTATACCTC+TGG | + | chr3.1:61322956-61322975 | None:intergenic | 40.0% | |
| CGACTCCAAAAATGCTATAG+CGG | - | chr3.1:61324972-61324991 | MS.gene98299:intron | 40.0% | |
| CTAAGACGAGATGCAGATAA+AGG | + | chr3.1:61321890-61321909 | None:intergenic | 40.0% | |
| CTCATTGGGTGAAATTCATG+TGG | - | chr3.1:61324188-61324207 | MS.gene98299:intron | 40.0% | |
| CTCTGATCACAACCATAAAC+TGG | + | chr3.1:61322246-61322265 | None:intergenic | 40.0% | |
| CTTAGAGAAACTATCAGCAG+CGG | + | chr3.1:61324520-61324539 | None:intergenic | 40.0% | |
| CTTTATCTGCATCTCGTCTT+AGG | - | chr3.1:61321888-61321907 | MS.gene98299:intron | 40.0% | |
| GAAATGGATCCCACATAAAG+TGG | - | chr3.1:61324224-61324243 | MS.gene98299:CDS | 40.0% | |
| GAAGTTACAAACCTGAGGAA+CGG | - | chr3.1:61325409-61325428 | MS.gene98299:intron | 40.0% | |
| GACTCCAAAAATGCTATAGC+GGG | - | chr3.1:61324973-61324992 | MS.gene98299:intron | 40.0% | |
| GCTAACACTCACTCTTCTAT+TGG | + | chr3.1:61324271-61324290 | None:intergenic | 40.0% | |
| GCTCAAAGACATAAACAGAC+CGG | + | chr3.1:61325196-61325215 | None:intergenic | 40.0% | |
| GCTTATCGTTGTTCCATTAC+TGG | + | chr3.1:61321312-61321331 | None:intergenic | 40.0% | |
| GCTTATTTGAGCTTATCTGC+TGG | + | chr3.1:61321853-61321872 | None:intergenic | 40.0% | |
| GGAATATCGATCATCCATTC+GGG | + | chr3.1:61321133-61321152 | None:intergenic | 40.0% | |
| GTCAAGAAGTTACAAACCTG+AGG | - | chr3.1:61325404-61325423 | MS.gene98299:intron | 40.0% | |
| GTGATAATCTCGACATTGCT+TGG | + | chr3.1:61325174-61325193 | None:intergenic | 40.0% | |
| GTTATGGACACAGACAGTAA+AGG | - | chr3.1:61322667-61322686 | MS.gene98299:intron | 40.0% | |
| GTTTATGGTTGTGATCAGAG+TGG | - | chr3.1:61322246-61322265 | MS.gene98299:intron | 40.0% | |
| TACCTTCTACGGTTTGCAAT+TGG | - | chr3.1:61324414-61324433 | MS.gene98299:intron | 40.0% | |
| TCCAAACAGCCAAATACCAA+AGG | + | chr3.1:61323867-61323886 | None:intergenic | 40.0% | |
| TCCTTTGGTATTTGGCTGTT+TGG | - | chr3.1:61323863-61323882 | MS.gene98299:intron | 40.0% | |
| TGTGATAAGGTCAGCAATGA+AGG | + | chr3.1:61325095-61325114 | None:intergenic | 40.0% | |
| TTACGCCGTTAGCATTAGTT+TGG | - | chr3.1:61322620-61322639 | MS.gene98299:intron | 40.0% | |
| TTCGTCATTCTGATGTGGTT+CGG | + | chr3.1:61321038-61321057 | None:intergenic | 40.0% | |
| TTGGTATTTGGCTGTTTGGA+CGG | - | chr3.1:61323867-61323886 | MS.gene98299:intron | 40.0% | |
| TTTAGAAGAGAGCAAACACG+AGG | - | chr3.1:61325382-61325401 | MS.gene98299:intron | 40.0% | |
| ! | ACTTGACTGCATTTTCCATG+AGG | - | chr3.1:61321433-61321452 | MS.gene98299:intron | 40.0% |
| ! | CAAGTTTCCAGAGGTATAGA+TGG | - | chr3.1:61322946-61322965 | MS.gene98299:intron | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr3.1:61324980-61324999 | None:intergenic | 40.0% |
| ! | GCAGCAGGTTTGTTTGAAAT+AGG | - | chr3.1:61323899-61323918 | MS.gene98299:intron | 40.0% |
| ! | TACAACTTTAAAGAGGCTCC+AGG | - | chr3.1:61323679-61323698 | MS.gene98299:intron | 40.0% |
| ! | TTGCAAGACCTTCTGGAAAA+AGG | - | chr3.1:61321273-61321292 | MS.gene98299:intron | 40.0% |
| ! | TTTTGTGGACAACACAGTCA+TGG | + | chr3.1:61325269-61325288 | None:intergenic | 40.0% |
| !! | AACTCTAAGCTTGCTGAAAC+CGG | - | chr3.1:61322171-61322190 | MS.gene98299:intron | 40.0% |
| !! | ACTTGGCTTTGTCCATTGAA+GGG | + | chr3.1:61323621-61323640 | None:intergenic | 40.0% |
| !! | AGTTAATAGCGGTGCTATAG+CGG | + | chr3.1:61325801-61325820 | None:intergenic | 40.0% |
| !! | ATTGATATGGTTTGTTGGCG+TGG | - | chr3.1:61322102-61322121 | MS.gene98299:intron | 40.0% |
| !!! | CGCTATAGCATTTTTGGAGT+CGG | + | chr3.1:61324974-61324993 | None:intergenic | 40.0% |
| !!! | GTTTTGGAGCTTCAAGAAGA+TGG | - | chr3.1:61323816-61323835 | MS.gene98299:intron | 40.0% |
| !!! | TTTTGGGGTGAGAAGATGAA+AGG | - | chr3.1:61325523-61325542 | MS.gene98299:CDS | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | - | chr3.1:61325687-61325706 | MS.gene98299:intron | 45.0% | |
| AACAACTCATGCATCCCGAA+TGG | - | chr3.1:61321116-61321135 | MS.gene98299:intron | 45.0% | |
| ACAAGTTCCTAACCAACAGC+AGG | - | chr3.1:61322690-61322709 | MS.gene98299:intron | 45.0% | |
| ACGAGATGCAGATAAAGGGT+CGG | + | chr3.1:61321885-61321904 | None:intergenic | 45.0% | |
| AGCACCGCTATTAACTACTC+TGG | - | chr3.1:61325805-61325824 | MS.gene98299:CDS | 45.0% | |
| ATCTGTCAGCTCACTTTGGT+TGG | - | chr3.1:61325921-61325940 | MS.gene98299:CDS | 45.0% | |
| CATCACCCGTAATTCCCAAT+TGG | - | chr3.1:61325048-61325067 | MS.gene98299:intron | 45.0% | |
| CCTGTGCCTTATGTCAAAGA+CGG | - | chr3.1:61322291-61322310 | MS.gene98299:intron | 45.0% | |
| CGCCATTGCATGCTAAGATT+TGG | - | chr3.1:61324617-61324636 | MS.gene98299:CDS | 45.0% | |
| CGCTGCTGATAGTTTCTCTA+AGG | - | chr3.1:61324518-61324537 | MS.gene98299:intron | 45.0% | |
| CTACGGTTTGCAATTGGAGA+GGG | - | chr3.1:61324420-61324439 | MS.gene98299:intron | 45.0% | |
| CTAGAAGCTTCGAAGCTGAA+AGG | - | chr3.1:61321067-61321086 | MS.gene98299:intron | 45.0% | |
| CTCCAATTGCAAACCGTAGA+AGG | + | chr3.1:61324419-61324438 | None:intergenic | 45.0% | |
| CTTCAATGGACAAAGCCAAG+TGG | - | chr3.1:61323620-61323639 | MS.gene98299:intron | 45.0% | |
| GACGATCCTCCTTTGGTATT+TGG | - | chr3.1:61323855-61323874 | MS.gene98299:intron | 45.0% | |
| GATGCAGTGTTCAATCACCA+AGG | + | chr3.1:61322803-61322822 | None:intergenic | 45.0% | |
| GCGCCGTAAAGAATGAAAGA+AGG | - | chr3.1:61325545-61325564 | MS.gene98299:CDS | 45.0% | |
| GCTCCGTTTGGCAATTTAGA+AGG | + | chr3.1:61321368-61321387 | None:intergenic | 45.0% | |
| GCTCTTGATCGGAGACTAAA+GGG | + | chr3.1:61320868-61320887 | None:intergenic | 45.0% | |
| GGAAACAGAGAGCAGAATAG+AGG | - | chr3.1:61325302-61325321 | MS.gene98299:intron | 45.0% | |
| GGGGAAAATTGACCAAGACT+TGG | + | chr3.1:61322514-61322533 | None:intergenic | 45.0% | |
| GGTCTACTTTCTTGATCTGC+TGG | + | chr3.1:61326055-61326074 | None:intergenic | 45.0% | |
| GTGAAAGCTCTTTACACCGA+CGG | - | chr3.1:61322001-61322020 | MS.gene98299:intron | 45.0% | |
| TAGACCATGCGACATTGAGA+TGG | - | chr3.1:61326069-61326088 | MS.gene98299:CDS | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | - | chr3.1:61325725-61325744 | MS.gene98299:intron | 45.0% | |
| TCCTTTGTTCTTGCTCCGTT+TGG | + | chr3.1:61321380-61321399 | None:intergenic | 45.0% | |
| TCGAGTTCGTCATTCTGATG+TGG | + | chr3.1:61321043-61321062 | None:intergenic | 45.0% | |
| TCGTCATTCTGATGTGGTTC+GGG | + | chr3.1:61321037-61321056 | None:intergenic | 45.0% | |
| TCTACGGTTTGCAATTGGAG+AGG | - | chr3.1:61324419-61324438 | MS.gene98299:intron | 45.0% | |
| TGATCTACGGTATCTTGGCA+AGG | - | chr3.1:61324479-61324498 | MS.gene98299:intron | 45.0% | |
| TGCATCGTGTACGAATCGTT+GGG | - | chr3.1:61322817-61322836 | MS.gene98299:intron | 45.0% | |
| TGGGATCCATTTCCAAAGTG+TGG | + | chr3.1:61324217-61324236 | None:intergenic | 45.0% | |
| TTCATGTGGGTACCACACTT+TGG | - | chr3.1:61324202-61324221 | MS.gene98299:intron | 45.0% | |
| TTCGGGATGCATGAGTTGTT+TGG | + | chr3.1:61321116-61321135 | None:intergenic | 45.0% | |
| TTTGACATAAGGCACAGGTG+CGG | + | chr3.1:61322289-61322308 | None:intergenic | 45.0% | |
| ! | ATTCTGATGTGGTTCGGGTT+GGG | + | chr3.1:61321032-61321051 | None:intergenic | 45.0% |
| ! | CTGGTAATGTGCATGCCTAA+GGG | + | chr3.1:61322593-61322612 | None:intergenic | 45.0% |
| ! | CTTTCCAAACCAGGTGGTTT+TGG | - | chr3.1:61323800-61323819 | MS.gene98299:intron | 45.0% |
| ! | GAAAACACCTGCTGTTGGTT+AGG | + | chr3.1:61322700-61322719 | None:intergenic | 45.0% |
| ! | GCCGTTAGCATTAGTTTGGA+AGG | - | chr3.1:61322624-61322643 | MS.gene98299:intron | 45.0% |
| ! | TGGGTACCACACTTTGGAAA+TGG | - | chr3.1:61324208-61324227 | MS.gene98299:intron | 45.0% |
| ! | TGGTAATGTGCATGCCTAAG+GGG | + | chr3.1:61322592-61322611 | None:intergenic | 45.0% |
| ! | TGTTGCGATTTTGCACTTCC+AGG | - | chr3.1:61325843-61325862 | MS.gene98299:CDS | 45.0% |
| !! | ACCAATCTCGTGACGGATAT+TGG | + | chr3.1:61324748-61324767 | None:intergenic | 45.0% |
| !! | CACTTGGCTTTGTCCATTGA+AGG | + | chr3.1:61323622-61323641 | None:intergenic | 45.0% |
| !! | GGGAGTGTCGAACACTATAT+TGG | + | chr3.1:61325876-61325895 | None:intergenic | 45.0% |
| !!! | AGAGGGAGGATTGGTTTTGT+TGG | - | chr3.1:61324437-61324456 | MS.gene98299:intron | 45.0% |
| !!! | GGAGGATTGGTTTTGTTGGA+TGG | - | chr3.1:61324441-61324460 | MS.gene98299:intron | 45.0% |
| !!! | GTTTTCTGGCTTTCCAAACC+AGG | - | chr3.1:61323791-61323810 | MS.gene98299:intron | 45.0% |
| !! | TTTCTTTAATAAATTTATAA+TGG | - | chr3.1:61322879-61322898 | MS.gene98299:intron | 5.0% |
| AGAGGAGGAGAGAGAGAATG+CGG | + | chr3.1:61320969-61320988 | None:intergenic | 50.0% | |
| AGAGGGTAGACAAGTCCACT+TGG | + | chr3.1:61323638-61323657 | None:intergenic | 50.0% | |
| AGCTCCAAAACCACCTGGTT+TGG | + | chr3.1:61323807-61323826 | None:intergenic | 50.0% | |
| ATGCAGATAAAGGGTCGGTC+TGG | + | chr3.1:61321880-61321899 | None:intergenic | 50.0% | |
| CCATCCATCTCAATGTCGCA+TGG | + | chr3.1:61326076-61326095 | None:intergenic | 50.0% | |
| CCATGCGACATTGAGATGGA+TGG | - | chr3.1:61326073-61326092 | MS.gene98299:CDS | 50.0% | |
| CCGTCTTTGACATAAGGCAC+AGG | + | chr3.1:61322294-61322313 | None:intergenic | 50.0% | |
| CCTTAGGCATGCACATTACC+AGG | - | chr3.1:61322591-61322610 | MS.gene98299:intron | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr3.1:61325740-61325759 | MS.gene98299:intron | 50.0% | |
| CGCTCTTGATCGGAGACTAA+AGG | + | chr3.1:61320869-61320888 | None:intergenic | 50.0% | |
| CTGCATCGTGTACGAATCGT+TGG | - | chr3.1:61322816-61322835 | MS.gene98299:intron | 50.0% | |
| CTTGAAGCTCCAAAACCACC+TGG | + | chr3.1:61323812-61323831 | None:intergenic | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr3.1:61325745-61325764 | None:intergenic | 50.0% | |
| GATAAAGGGTCGGTCTGGAT+TGG | + | chr3.1:61321875-61321894 | None:intergenic | 50.0% | |
| GCCAAACGGAGCAAGAACAA+AGG | - | chr3.1:61321376-61321395 | MS.gene98299:intron | 50.0% | |
| GCCAATATCCGTCACGAGAT+TGG | - | chr3.1:61324744-61324763 | MS.gene98299:CDS | 50.0% | |
| GGATCCCACATAAAGTGGTG+AGG | - | chr3.1:61324229-61324248 | MS.gene98299:CDS | 50.0% | |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr3.1:61325724-61325743 | None:intergenic | 50.0% | |
| GGTAATGTGCATGCCTAAGG+GGG | + | chr3.1:61322591-61322610 | None:intergenic | 50.0% | |
| GTAATGTGCATGCCTAAGGG+GGG | + | chr3.1:61322590-61322609 | None:intergenic | 50.0% | |
| GTTACAAACCTGAGGAACGG+CGG | - | chr3.1:61325412-61325431 | MS.gene98299:intron | 50.0% | |
| TCTCCAAACCCACCCTTCAA+TGG | - | chr3.1:61323606-61323625 | MS.gene98299:intron | 50.0% | |
| TGCAATTGGAGAGGGAGGAT+TGG | - | chr3.1:61324428-61324447 | MS.gene98299:intron | 50.0% | |
| TGCAGTCAGATCTGCACTCA+GGG | - | chr3.1:61324391-61324410 | MS.gene98299:intron | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr3.1:61325745-61325764 | MS.gene98299:intron | 50.0% | |
| TGGGATCTGTCAGCTCACTT+TGG | - | chr3.1:61325917-61325936 | MS.gene98299:CDS | 50.0% | |
| TGGGCCTCACCACTTTATGT+GGG | + | chr3.1:61324236-61324255 | None:intergenic | 50.0% | |
| TTGCAGTCAGATCTGCACTC+AGG | - | chr3.1:61324390-61324409 | MS.gene98299:intron | 50.0% | |
| TTGTCTGCGTCGCTCTTGAT+CGG | + | chr3.1:61320879-61320898 | None:intergenic | 50.0% | |
| ! | AGTGGACTTGTCTACCCTCT+CGG | - | chr3.1:61323638-61323657 | MS.gene98299:intron | 50.0% |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr3.1:61325713-61325732 | None:intergenic | 50.0% |
| ! | CATTCTGATGTGGTTCGGGT+TGG | + | chr3.1:61321033-61321052 | None:intergenic | 50.0% |
| ! | CCTGGTAATGTGCATGCCTA+AGG | + | chr3.1:61322594-61322613 | None:intergenic | 50.0% |
| ! | GGCTTTGTCCATTGAAGGGT+GGG | + | chr3.1:61323617-61323636 | None:intergenic | 50.0% |
| ! | TGCACTCAGGGTACCTTCTA+CGG | - | chr3.1:61324403-61324422 | MS.gene98299:intron | 50.0% |
| ! | TGTCCATTGAAGGGTGGGTT+TGG | + | chr3.1:61323612-61323631 | None:intergenic | 50.0% |
| ! | TTGAAGGGTGGGTTTGGAGA+AGG | + | chr3.1:61323606-61323625 | None:intergenic | 50.0% |
| !! | AAGGCGCTGAAGCTCGAATA+TGG | - | chr3.1:61321086-61321105 | MS.gene98299:intron | 50.0% |
| !! | CTAAAGGGCGCTTGAATGGA+CGG | + | chr3.1:61320853-61320872 | None:intergenic | 50.0% |
| !! | GAGACTAAAGGGCGCTTGAA+TGG | + | chr3.1:61320857-61320876 | None:intergenic | 50.0% |
| !! | GGTTTCAGGTTCGGGAGTTT+GGG | + | chr3.1:61320993-61321012 | None:intergenic | 50.0% |
| !! | TGGCTTTGTCCATTGAAGGG+TGG | + | chr3.1:61323618-61323637 | None:intergenic | 50.0% |
| !! | TTCCGGTTCGGTTTCAGGTT+CGG | + | chr3.1:61321002-61321021 | None:intergenic | 50.0% |
| !! | TTCTGATGTGGTTCGGGTTG+GGG | + | chr3.1:61321031-61321050 | None:intergenic | 50.0% |
| !! | TTCTGGCTTTCCAAACCAGG+TGG | - | chr3.1:61323794-61323813 | MS.gene98299:intron | 50.0% |
| AGGCATGCACATTACCAGGC+TGG | - | chr3.1:61322595-61322614 | MS.gene98299:intron | 55.0% | |
| AGGTTCGGGAGTTTGGGAAG+AGG | + | chr3.1:61320987-61321006 | None:intergenic | 55.0% | |
| AGTCACACACCAACACCGAG+AGG | + | chr3.1:61323656-61323675 | None:intergenic | 55.0% | |
| CATGGCAGAGTCGTGTCAAC+AGG | + | chr3.1:61324583-61324602 | None:intergenic | 55.0% | |
| CGAGGCGATTCTGTGCTTGA+CGG | + | chr3.1:61320913-61320932 | None:intergenic | 55.0% | |
| CGGTTTGCAATTGGAGAGGG+AGG | - | chr3.1:61324423-61324442 | MS.gene98299:intron | 55.0% | |
| GAAATAGCGGCCATAGCGCT+AGG | + | chr3.1:61325005-61325024 | None:intergenic | 55.0% | |
| GGCATGCACATTACCAGGCT+GGG | - | chr3.1:61322596-61322615 | MS.gene98299:intron | 55.0% | |
| GTCACACACCAACACCGAGA+GGG | + | chr3.1:61323655-61323674 | None:intergenic | 55.0% | |
| GTCATGGCAGCATCAGCTTC+TGG | + | chr3.1:61325253-61325272 | None:intergenic | 55.0% | |
| GTGGGCCTCACCACTTTATG+TGG | + | chr3.1:61324237-61324256 | None:intergenic | 55.0% | |
| TAAGGAACGACGGCGGATGA+CGG | - | chr3.1:61325438-61325457 | MS.gene98299:intron | 55.0% | |
| TACCAAAGGAGGATCGTCGC+AGG | + | chr3.1:61323853-61323872 | None:intergenic | 55.0% | |
| TCCCGAACCTGAAACCGAAC+CGG | - | chr3.1:61320997-61321016 | MS.gene98299:intron | 55.0% | |
| TGGAAGCTAAGAAGCGAGCG+TGG | + | chr3.1:61320946-61320965 | None:intergenic | 55.0% | |
| TTCGGGAGTTTGGGAAGAGG+AGG | + | chr3.1:61320984-61321003 | None:intergenic | 55.0% | |
| TTGGGGTTGGAGTTCCGGTT+CGG | + | chr3.1:61321014-61321033 | None:intergenic | 55.0% | |
| ! | CTTGTCTACCCTCTCGGTGT+TGG | - | chr3.1:61323644-61323663 | MS.gene98299:intron | 55.0% |
| ! | GGTGCTATAGCGGCCAATAG+CGG | + | chr3.1:61325791-61325810 | None:intergenic | 55.0% |
| !! | CGGTTTCAGGTTCGGGAGTT+TGG | + | chr3.1:61320994-61321013 | None:intergenic | 55.0% |
| !! | TCCGGTTCGGTTTCAGGTTC+GGG | + | chr3.1:61321001-61321020 | None:intergenic | 55.0% |
| !! | TGGAGTTCCGGTTCGGTTTC+AGG | + | chr3.1:61321007-61321026 | None:intergenic | 55.0% |
| AATGGACGGCGGAGATCGTG+CGG | + | chr3.1:61320839-61320858 | None:intergenic | 60.0% | |
| ACAAACCTGAGGAACGGCGG+CGG | - | chr3.1:61325415-61325434 | MS.gene98299:intron | 60.0% | |
| CAAAGGAGGATCGTCGCAGG+TGG | + | chr3.1:61323850-61323869 | None:intergenic | 60.0% | |
| CACCTGCGACGATCCTCCTT+TGG | - | chr3.1:61323848-61323867 | MS.gene98299:intron | 60.0% | |
| CTAACGGCGTAATCCCAGCC+TGG | + | chr3.1:61322612-61322631 | None:intergenic | 60.0% | |
| GGACGGAAGCTTCATGCAGC+AGG | - | chr3.1:61323884-61323903 | MS.gene98299:intron | 60.0% | |
| GGAGGAGAGAGAGAATGCGG+TGG | + | chr3.1:61320966-61320985 | None:intergenic | 60.0% | |
| ! | CGAAGGAGGGTCAAAGGCAC+CGG | + | chr3.1:61322193-61322212 | None:intergenic | 60.0% |
| ! | GGTGCGACTGCGGCGTTTTA+CGG | - | chr3.1:61325459-61325478 | MS.gene98299:intron | 60.0% |
| !! | AAGGGCGCTTGAATGGACGG+CGG | + | chr3.1:61320850-61320869 | None:intergenic | 60.0% |
| !! | GATGTGGTTCGGGTTGGGGT+TGG | + | chr3.1:61321027-61321046 | None:intergenic | 60.0% |
| !! | TCGGGTTGGGGTTGGAGTTC+CGG | + | chr3.1:61321019-61321038 | None:intergenic | 60.0% |
| ACGGCGGCGGTAAGGAACGA+CGG | - | chr3.1:61325428-61325447 | MS.gene98299:intron | 65.0% | |
| AGCAGCGGCACGAGCTCGAT+TGG | + | chr3.1:61324505-61324524 | None:intergenic | 65.0% | |
| CGGGATAGCGCCTAGCGCTA+TGG | - | chr3.1:61324992-61325011 | MS.gene98299:intron | 65.0% | |
| GCGGCCGCAACACTGCATAG+CGG | + | chr3.1:61325694-61325713 | None:intergenic | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr3.1:61324948-61324967 | MS.gene98299:intron | 65.0% |
| CCTGAGGAACGGCGGCGGTA+AGG | - | chr3.1:61325420-61325439 | MS.gene98299:intron | 70.0% | |
| CCTTACCGCCGCCGTTCCTC+AGG | + | chr3.1:61325423-61325442 | None:intergenic | 70.0% | |
| GCGGCGGTAAGGAACGACGG+CGG | - | chr3.1:61325431-61325450 | MS.gene98299:intron | 70.0% | |
| ! | GAGCGTGGCGTTGAGCGTCG+AGG | + | chr3.1:61320931-61320950 | None:intergenic | 70.0% |
| ! | GGCGGATGACGGTGCGACTG+CGG | - | chr3.1:61325449-61325468 | MS.gene98299:intron | 70.0% |
| AGCGGCCAATAGCGGCCGCG+CGG | + | chr3.1:61325783-61325802 | None:intergenic | 75.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | + | chr3.1:61325778-61325797 | None:intergenic | 75.0% | |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | - | chr3.1:61325775-61325794 | MS.gene98299:CDS | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | + | chr3.1:61325767-61325786 | None:intergenic | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | - | chr3.1:61325765-61325784 | MS.gene98299:CDS | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr3.1:61325773-61325792 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61320830 | 61326099 | 61320830 | ID=MS.gene98299 |
| chr3.1 | mRNA | 61320830 | 61326099 | 61320830 | ID=MS.gene98299.t1;Parent=MS.gene98299 |
| chr3.1 | exon | 61325756 | 61326099 | 61325756 | ID=MS.gene98299.t1.exon1;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61325756 | 61326099 | 61325756 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| chr3.1 | exon | 61325475 | 61325664 | 61325475 | ID=MS.gene98299.t1.exon2;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61325475 | 61325664 | 61325475 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| chr3.1 | exon | 61324598 | 61324848 | 61324598 | ID=MS.gene98299.t1.exon3;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61324598 | 61324848 | 61324598 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| chr3.1 | exon | 61324218 | 61324332 | 61324218 | ID=MS.gene98299.t1.exon4;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61324218 | 61324332 | 61324218 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| chr3.1 | exon | 61323024 | 61323116 | 61323024 | ID=MS.gene98299.t1.exon5;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61323024 | 61323116 | 61323024 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| chr3.1 | exon | 61322390 | 61322533 | 61322390 | ID=MS.gene98299.t1.exon6;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61322390 | 61322533 | 61322390 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| chr3.1 | exon | 61320830 | 61320946 | 61320830 | ID=MS.gene98299.t1.exon7;Parent=MS.gene98299.t1 |
| chr3.1 | CDS | 61320830 | 61320946 | 61320830 | ID=cds.MS.gene98299.t1;Parent=MS.gene98299.t1 |
| Gene Sequence |
| Protein sequence |
