Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98315.t1 | XP_013460901.1 | 81.1 | 350 | 20 | 5 | 1 | 308 | 1 | 346 | 1.40E-150 | 542.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98315.t1 | Q9S9Z2 | 41.8 | 323 | 105 | 10 | 1 | 252 | 1 | 311 | 1.4e-50 | 201.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98315.t1 | A0A072V9U0 | 81.1 | 350 | 20 | 5 | 1 | 308 | 1 | 346 | 1.0e-150 | 542.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene98315.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051422 | MS.gene98315 | 0.825048 | 5.79E-54 | -1.69E-46 |
| MS.gene059685 | MS.gene98315 | 0.81456 | 1.45E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98315 | MS.gene055461 | PPI |
| MS.gene98315 | MS.gene21778 | PPI |
| MS.gene98315 | MS.gene070372 | PPI |
| MS.gene98315 | MS.gene058089 | PPI |
| MS.gene98315 | MS.gene024798 | PPI |
| MS.gene98315 | MS.gene024799 | PPI |
| MS.gene98315 | MS.gene94966 | PPI |
| MS.gene98315 | MS.gene60976 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98315.t1 | MTR_3g074520 | 82.286 | 350 | 16 | 5 | 1 | 308 | 1 | 346 | 0.0 | 510 |
| MS.gene98315.t1 | MTR_4g478180 | 49.746 | 197 | 45 | 6 | 1 | 152 | 2 | 189 | 1.26e-50 | 171 |
| MS.gene98315.t1 | MTR_5g007370 | 51.572 | 159 | 31 | 3 | 1 | 113 | 1 | 159 | 3.57e-44 | 152 |
| MS.gene98315.t1 | MTR_5g029840 | 42.289 | 201 | 58 | 4 | 1 | 159 | 1 | 185 | 3.79e-43 | 151 |
| MS.gene98315.t1 | MTR_6g012690 | 51.880 | 133 | 22 | 1 | 1 | 91 | 1 | 133 | 1.26e-40 | 145 |
| MS.gene98315.t1 | MTR_7g011170 | 39.665 | 179 | 60 | 2 | 1 | 137 | 1 | 173 | 2.28e-38 | 138 |
| MS.gene98315.t1 | MTR_4g091490 | 47.015 | 134 | 28 | 2 | 1 | 91 | 1 | 134 | 1.96e-37 | 136 |
| MS.gene98315.t1 | MTR_2g011660 | 48.462 | 130 | 24 | 2 | 1 | 87 | 1 | 130 | 3.98e-37 | 135 |
| MS.gene98315.t1 | MTR_4g082290 | 40.860 | 186 | 59 | 3 | 1 | 141 | 1 | 180 | 2.08e-36 | 135 |
| MS.gene98315.t1 | MTR_2g089620 | 47.328 | 131 | 27 | 1 | 1 | 89 | 1 | 131 | 8.34e-35 | 129 |
| MS.gene98315.t1 | MTR_4g082230 | 39.785 | 186 | 61 | 3 | 1 | 141 | 1 | 180 | 8.40e-35 | 130 |
| MS.gene98315.t1 | MTR_7g076740 | 39.773 | 176 | 58 | 4 | 1 | 133 | 1 | 171 | 9.12e-35 | 128 |
| MS.gene98315.t1 | MTR_5g078140 | 49.219 | 128 | 23 | 1 | 1 | 86 | 1 | 128 | 8.65e-34 | 126 |
| MS.gene98315.t1 | MTR_8g031360 | 49.231 | 130 | 22 | 3 | 1 | 86 | 1 | 130 | 3.92e-33 | 124 |
| MS.gene98315.t1 | MTR_4g102380 | 47.656 | 128 | 25 | 1 | 1 | 86 | 1 | 128 | 8.01e-33 | 122 |
| MS.gene98315.t1 | MTR_3g065440 | 48.031 | 127 | 24 | 1 | 1 | 85 | 1 | 127 | 3.61e-32 | 121 |
| MS.gene98315.t1 | MTR_6g009430 | 37.419 | 155 | 51 | 2 | 1 | 109 | 1 | 155 | 9.95e-32 | 121 |
| MS.gene98315.t1 | MTR_3g461490 | 35.500 | 200 | 75 | 2 | 1 | 158 | 1 | 188 | 1.30e-31 | 120 |
| MS.gene98315.t1 | MTR_4g073420 | 42.188 | 128 | 32 | 1 | 1 | 86 | 1 | 128 | 8.11e-30 | 114 |
| MS.gene98315.t1 | MTR_3g097450 | 41.985 | 131 | 34 | 1 | 1 | 89 | 1 | 131 | 4.50e-29 | 113 |
| MS.gene98315.t1 | MTR_8g095390 | 42.424 | 132 | 34 | 1 | 1 | 90 | 1 | 132 | 4.95e-29 | 113 |
| MS.gene98315.t1 | MTR_1g100653 | 44.915 | 118 | 23 | 1 | 1 | 76 | 1 | 118 | 1.94e-28 | 111 |
| MS.gene98315.t1 | MTR_1g076150 | 47.458 | 118 | 20 | 1 | 1 | 76 | 1 | 118 | 2.89e-28 | 110 |
| MS.gene98315.t1 | MTR_3g083540 | 44.355 | 124 | 27 | 1 | 5 | 86 | 34 | 157 | 5.14e-28 | 110 |
| MS.gene98315.t1 | MTR_7g115650 | 44.828 | 116 | 22 | 1 | 1 | 74 | 1 | 116 | 5.21e-28 | 108 |
| MS.gene98315.t1 | MTR_1g085040 | 41.667 | 132 | 35 | 1 | 1 | 90 | 1 | 132 | 1.30e-27 | 110 |
| MS.gene98315.t1 | MTR_7g110830 | 41.667 | 132 | 35 | 1 | 1 | 90 | 1 | 132 | 2.01e-27 | 110 |
| MS.gene98315.t1 | MTR_1g085640 | 40.909 | 132 | 36 | 1 | 1 | 90 | 1 | 132 | 3.10e-27 | 110 |
| MS.gene98315.t1 | MTR_7g096930 | 45.763 | 118 | 22 | 1 | 1 | 76 | 1 | 118 | 8.44e-27 | 106 |
| MS.gene98315.t1 | MTR_7g010210 | 45.690 | 116 | 21 | 1 | 1 | 74 | 1 | 116 | 1.01e-26 | 107 |
| MS.gene98315.t1 | MTR_7g010210 | 45.690 | 116 | 21 | 1 | 1 | 74 | 1 | 116 | 1.11e-26 | 106 |
| MS.gene98315.t1 | MTR_4g121460 | 44.828 | 116 | 22 | 1 | 1 | 74 | 1 | 116 | 1.12e-26 | 107 |
| MS.gene98315.t1 | MTR_5g079670 | 38.400 | 125 | 35 | 1 | 3 | 85 | 2 | 126 | 1.78e-26 | 103 |
| MS.gene98315.t1 | MTR_4g105130 | 41.221 | 131 | 35 | 1 | 1 | 89 | 1 | 131 | 3.04e-26 | 106 |
| MS.gene98315.t1 | MTR_1g043080 | 45.299 | 117 | 22 | 1 | 1 | 75 | 1 | 117 | 3.09e-26 | 104 |
| MS.gene98315.t1 | MTR_1g043050 | 45.299 | 117 | 22 | 1 | 1 | 75 | 1 | 117 | 3.39e-26 | 104 |
| MS.gene98315.t1 | MTR_2g034790 | 40.000 | 135 | 39 | 1 | 1 | 93 | 1 | 135 | 4.92e-26 | 105 |
| MS.gene98315.t1 | MTR_4g057635 | 40.769 | 130 | 34 | 2 | 1 | 87 | 1 | 130 | 3.59e-25 | 103 |
| MS.gene98315.t1 | MTR_7g087130 | 42.400 | 125 | 28 | 2 | 1 | 81 | 1 | 125 | 1.01e-24 | 102 |
| MS.gene98315.t1 | MTR_0140s0030 | 43.103 | 116 | 24 | 1 | 1 | 74 | 2 | 117 | 1.34e-24 | 101 |
| MS.gene98315.t1 | MTR_0489s0020 | 43.103 | 116 | 24 | 1 | 1 | 74 | 2 | 117 | 1.34e-24 | 101 |
| MS.gene98315.t1 | MTR_7g117730 | 43.966 | 116 | 23 | 1 | 1 | 74 | 1 | 116 | 1.39e-24 | 100 |
| MS.gene98315.t1 | MTR_3g077110 | 38.235 | 136 | 42 | 1 | 1 | 94 | 1 | 136 | 2.06e-24 | 101 |
| MS.gene98315.t1 | MTR_2g064160 | 40.496 | 121 | 30 | 1 | 6 | 84 | 5 | 125 | 2.11e-24 | 100 |
| MS.gene98315.t1 | MTR_5g014990 | 32.314 | 229 | 85 | 8 | 1 | 181 | 1 | 207 | 3.79e-24 | 100 |
| MS.gene98315.t1 | MTR_3g039990 | 41.176 | 119 | 28 | 1 | 1 | 77 | 2 | 120 | 3.99e-24 | 100 |
| MS.gene98315.t1 | MTR_7g109320 | 42.241 | 116 | 25 | 1 | 1 | 74 | 1 | 116 | 4.45e-24 | 100 |
| MS.gene98315.t1 | MTR_7g102110 | 41.667 | 120 | 27 | 2 | 1 | 77 | 1 | 120 | 4.75e-24 | 99.0 |
| MS.gene98315.t1 | MTR_7g111290 | 43.511 | 131 | 32 | 1 | 1 | 89 | 1 | 131 | 1.23e-23 | 99.8 |
| MS.gene98315.t1 | MTR_2g099740 | 33.133 | 166 | 59 | 3 | 1 | 117 | 1 | 163 | 1.81e-23 | 99.8 |
| MS.gene98315.t1 | MTR_5g042030 | 40.833 | 120 | 29 | 1 | 11 | 88 | 6 | 125 | 2.27e-23 | 97.4 |
| MS.gene98315.t1 | MTR_1g017140 | 43.220 | 118 | 24 | 2 | 1 | 75 | 1 | 118 | 2.46e-23 | 98.6 |
| MS.gene98315.t1 | MTR_3g103570 | 38.971 | 136 | 40 | 2 | 1 | 93 | 1 | 136 | 3.97e-23 | 97.8 |
| MS.gene98315.t1 | MTR_8g027345 | 42.241 | 116 | 25 | 1 | 1 | 74 | 1 | 116 | 4.34e-23 | 97.1 |
| MS.gene98315.t1 | MTR_1g017000 | 36.735 | 147 | 46 | 4 | 1 | 102 | 1 | 145 | 6.70e-23 | 95.5 |
| MS.gene98315.t1 | MTR_1g112760 | 39.683 | 126 | 34 | 1 | 3 | 86 | 4 | 129 | 7.04e-23 | 95.1 |
| MS.gene98315.t1 | MTR_2g067420 | 41.818 | 110 | 22 | 1 | 2 | 69 | 4 | 113 | 6.05e-22 | 94.4 |
| MS.gene98315.t1 | MTR_8g017440 | 32.515 | 163 | 59 | 3 | 1 | 112 | 1 | 163 | 7.56e-22 | 94.4 |
| MS.gene98315.t1 | MTR_4g125520 | 40.336 | 119 | 29 | 1 | 1 | 77 | 1 | 119 | 1.56e-21 | 92.8 |
| MS.gene98315.t1 | MTR_8g017540 | 37.607 | 117 | 31 | 1 | 1 | 75 | 47 | 163 | 2.76e-21 | 93.6 |
| MS.gene98315.t1 | MTR_2g089450 | 37.288 | 118 | 32 | 1 | 1 | 76 | 1 | 118 | 3.91e-21 | 90.9 |
| MS.gene98315.t1 | MTR_4g485530 | 38.400 | 125 | 34 | 2 | 3 | 84 | 2 | 126 | 4.18e-21 | 89.4 |
| MS.gene98315.t1 | MTR_2g095520 | 41.441 | 111 | 22 | 2 | 1 | 68 | 1 | 111 | 8.17e-21 | 91.3 |
| MS.gene98315.t1 | MTR_6g012180 | 40.541 | 111 | 24 | 1 | 1 | 69 | 1 | 111 | 8.36e-21 | 90.9 |
| MS.gene98315.t1 | MTR_4g097570 | 41.818 | 110 | 21 | 2 | 1 | 67 | 1 | 110 | 7.84e-20 | 87.8 |
| MS.gene98315.t1 | MTR_0008s0280 | 37.719 | 114 | 29 | 1 | 1 | 72 | 1 | 114 | 1.19e-19 | 86.3 |
| MS.gene98315.t1 | MTR_0008s0470 | 38.136 | 118 | 30 | 2 | 1 | 75 | 1 | 118 | 1.66e-19 | 87.0 |
| MS.gene98315.t1 | MTR_8g017500 | 36.207 | 116 | 32 | 1 | 1 | 74 | 1 | 116 | 1.70e-19 | 87.8 |
| MS.gene98315.t1 | MTR_6g090405 | 38.983 | 118 | 29 | 2 | 1 | 75 | 1 | 118 | 4.31e-19 | 85.1 |
| MS.gene98315.t1 | MTR_4g097570 | 41.441 | 111 | 21 | 3 | 1 | 67 | 1 | 111 | 6.10e-19 | 85.5 |
| MS.gene98315.t1 | MTR_0063s0090 | 38.053 | 113 | 28 | 1 | 1 | 71 | 1 | 113 | 2.96e-18 | 82.4 |
| MS.gene98315.t1 | MTR_4g128670 | 38.739 | 111 | 25 | 2 | 1 | 68 | 1 | 111 | 2.22e-17 | 81.6 |
| MS.gene98315.t1 | MTR_3g045430 | 34.328 | 134 | 45 | 2 | 1 | 91 | 1 | 134 | 6.26e-17 | 79.7 |
| MS.gene98315.t1 | MTR_5g007310 | 76.190 | 42 | 10 | 0 | 56 | 97 | 6 | 47 | 8.21e-16 | 75.5 |
| MS.gene98315.t1 | MTR_6g006030 | 35.537 | 121 | 34 | 2 | 1 | 77 | 1 | 121 | 3.25e-15 | 73.6 |
| MS.gene98315.t1 | MTR_1g100667 | 36.792 | 106 | 25 | 1 | 13 | 76 | 14 | 119 | 6.22e-15 | 73.9 |
| MS.gene98315.t1 | MTR_3g028740 | 36.697 | 109 | 27 | 1 | 8 | 74 | 18 | 126 | 8.63e-14 | 71.2 |
| MS.gene98315.t1 | MTR_4g065017 | 34.234 | 111 | 31 | 1 | 12 | 80 | 17 | 127 | 1.42e-13 | 70.5 |
| MS.gene98315.t1 | MTR_5g007300 | 63.043 | 46 | 17 | 0 | 1 | 46 | 53 | 98 | 1.86e-13 | 67.0 |
| MS.gene98315.t1 | MTR_1g062940 | 33.636 | 110 | 30 | 2 | 12 | 78 | 6 | 115 | 3.02e-12 | 65.5 |
| MS.gene98315.t1 | MTR_8g017480 | 50.000 | 46 | 23 | 0 | 1 | 46 | 1 | 46 | 3.66e-12 | 60.8 |
| MS.gene98315.t1 | MTR_2g096380 | 33.654 | 104 | 27 | 1 | 12 | 73 | 6 | 109 | 2.42e-11 | 63.2 |
| MS.gene98315.t1 | MTR_4g063100 | 33.019 | 106 | 29 | 1 | 13 | 76 | 8 | 113 | 4.53e-11 | 62.4 |
| MS.gene98315.t1 | MTR_8g020490 | 34.483 | 116 | 30 | 2 | 1 | 74 | 1 | 112 | 8.01e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98315.t1 | AT1G34670 | 40.000 | 385 | 134 | 14 | 1 | 308 | 1 | 365 | 6.12e-68 | 216 |
| MS.gene98315.t1 | AT5G10280 | 39.045 | 356 | 145 | 11 | 1 | 307 | 1 | 333 | 3.66e-58 | 190 |
| MS.gene98315.t1 | AT5G16770 | 42.152 | 223 | 59 | 4 | 1 | 166 | 1 | 210 | 1.22e-49 | 167 |
| MS.gene98315.t1 | AT5G16770 | 42.152 | 223 | 59 | 4 | 1 | 166 | 1 | 210 | 1.22e-49 | 167 |
| MS.gene98315.t1 | AT5G16770 | 42.152 | 223 | 59 | 4 | 1 | 166 | 1 | 210 | 2.77e-49 | 167 |
| MS.gene98315.t1 | AT5G16770 | 42.152 | 223 | 59 | 4 | 1 | 166 | 1 | 210 | 2.77e-49 | 167 |
| MS.gene98315.t1 | AT3G02940 | 37.024 | 289 | 105 | 7 | 1 | 233 | 1 | 268 | 2.50e-48 | 164 |
| MS.gene98315.t1 | AT3G02940 | 37.024 | 289 | 105 | 7 | 1 | 233 | 1 | 268 | 5.45e-48 | 163 |
| MS.gene98315.t1 | AT3G02940 | 37.024 | 289 | 105 | 7 | 1 | 233 | 1 | 268 | 5.45e-48 | 163 |
| MS.gene98315.t1 | AT5G65230 | 51.323 | 189 | 43 | 4 | 1 | 146 | 1 | 183 | 2.39e-47 | 161 |
| MS.gene98315.t1 | AT5G15310 | 44.199 | 181 | 52 | 4 | 1 | 137 | 1 | 176 | 2.15e-42 | 147 |
| MS.gene98315.t1 | AT5G15310 | 44.199 | 181 | 52 | 4 | 1 | 137 | 1 | 176 | 3.22e-42 | 148 |
| MS.gene98315.t1 | AT5G15310 | 44.199 | 181 | 52 | 4 | 1 | 137 | 1 | 176 | 3.60e-42 | 148 |
| MS.gene98315.t1 | AT3G01140 | 51.111 | 135 | 24 | 1 | 1 | 93 | 1 | 135 | 6.39e-41 | 145 |
| MS.gene98315.t1 | AT3G61250 | 51.562 | 128 | 20 | 1 | 1 | 86 | 1 | 128 | 7.50e-39 | 139 |
| MS.gene98315.t1 | AT3G01140 | 50.000 | 132 | 24 | 1 | 4 | 93 | 47 | 178 | 4.98e-38 | 139 |
| MS.gene98315.t1 | AT4G17785 | 48.905 | 137 | 27 | 2 | 1 | 94 | 1 | 137 | 9.12e-38 | 137 |
| MS.gene98315.t1 | AT4G17785 | 48.905 | 137 | 27 | 2 | 1 | 94 | 1 | 137 | 1.15e-37 | 137 |
| MS.gene98315.t1 | AT4G05100 | 49.231 | 130 | 23 | 2 | 1 | 87 | 1 | 130 | 5.94e-37 | 134 |
| MS.gene98315.t1 | AT4G28110 | 48.062 | 129 | 25 | 1 | 1 | 87 | 1 | 129 | 6.48e-36 | 130 |
| MS.gene98315.t1 | AT4G22680 | 50.000 | 128 | 22 | 1 | 1 | 86 | 1 | 128 | 7.70e-35 | 127 |
| MS.gene98315.t1 | AT4G21440 | 32.931 | 331 | 137 | 12 | 1 | 265 | 1 | 312 | 8.71e-35 | 129 |
| MS.gene98315.t1 | AT5G16600 | 49.219 | 128 | 23 | 1 | 1 | 86 | 1 | 128 | 6.40e-34 | 126 |
| MS.gene98315.t1 | AT1G66230 | 47.656 | 128 | 25 | 1 | 1 | 86 | 1 | 128 | 2.37e-33 | 124 |
| MS.gene98315.t1 | AT5G54230 | 47.482 | 139 | 31 | 1 | 1 | 97 | 1 | 139 | 2.02e-32 | 122 |
| MS.gene98315.t1 | AT4G12350 | 47.656 | 128 | 25 | 1 | 1 | 86 | 1 | 128 | 1.32e-31 | 119 |
| MS.gene98315.t1 | AT1G35515 | 41.611 | 149 | 33 | 3 | 1 | 95 | 1 | 149 | 3.19e-31 | 116 |
| MS.gene98315.t1 | AT5G60890 | 44.531 | 128 | 29 | 1 | 1 | 86 | 1 | 128 | 3.67e-31 | 118 |
| MS.gene98315.t1 | AT1G18570 | 46.094 | 128 | 26 | 2 | 1 | 85 | 1 | 128 | 1.86e-30 | 118 |
| MS.gene98315.t1 | AT4G34990 | 43.750 | 128 | 30 | 1 | 1 | 86 | 1 | 128 | 1.89e-30 | 116 |
| MS.gene98315.t1 | AT5G61420 | 43.750 | 128 | 30 | 1 | 1 | 86 | 1 | 128 | 1.89e-30 | 118 |
| MS.gene98315.t1 | AT5G07690 | 44.531 | 128 | 29 | 1 | 1 | 86 | 1 | 128 | 2.48e-30 | 117 |
| MS.gene98315.t1 | AT4G09460 | 44.094 | 127 | 29 | 1 | 1 | 85 | 1 | 127 | 2.94e-30 | 114 |
| MS.gene98315.t1 | AT4G38620 | 42.969 | 128 | 31 | 1 | 1 | 86 | 1 | 128 | 7.57e-30 | 115 |
| MS.gene98315.t1 | AT2G16720 | 42.520 | 127 | 31 | 1 | 1 | 85 | 1 | 127 | 8.09e-30 | 114 |
| MS.gene98315.t1 | AT1G22640 | 42.520 | 127 | 31 | 1 | 1 | 85 | 1 | 127 | 1.84e-29 | 113 |
| MS.gene98315.t1 | AT5G26660 | 44.531 | 128 | 29 | 1 | 1 | 86 | 1 | 128 | 3.79e-29 | 114 |
| MS.gene98315.t1 | AT5G56110 | 36.571 | 175 | 57 | 2 | 1 | 133 | 1 | 163 | 8.48e-29 | 112 |
| MS.gene98315.t1 | AT1G74080 | 42.748 | 131 | 33 | 1 | 1 | 89 | 1 | 131 | 1.30e-28 | 112 |
| MS.gene98315.t1 | AT5G62320 | 42.857 | 133 | 27 | 2 | 2 | 85 | 3 | 135 | 1.84e-28 | 110 |
| MS.gene98315.t1 | AT5G07700 | 38.323 | 167 | 52 | 3 | 1 | 125 | 1 | 158 | 2.53e-28 | 112 |
| MS.gene98315.t1 | AT5G07700 | 38.323 | 167 | 52 | 3 | 1 | 125 | 1 | 158 | 2.53e-28 | 112 |
| MS.gene98315.t1 | AT3G13540 | 42.400 | 125 | 30 | 1 | 4 | 86 | 15 | 139 | 3.43e-28 | 109 |
| MS.gene98315.t1 | AT1G09540 | 35.593 | 177 | 65 | 2 | 1 | 135 | 1 | 170 | 3.92e-28 | 112 |
| MS.gene98315.t1 | AT3G23250 | 48.276 | 116 | 18 | 1 | 1 | 74 | 1 | 116 | 4.83e-28 | 110 |
| MS.gene98315.t1 | AT1G57560 | 40.152 | 132 | 37 | 1 | 1 | 90 | 1 | 132 | 1.14e-27 | 109 |
| MS.gene98315.t1 | AT2G31180 | 34.637 | 179 | 64 | 2 | 1 | 126 | 1 | 179 | 1.38e-27 | 108 |
| MS.gene98315.t1 | AT5G14340 | 41.353 | 133 | 36 | 1 | 1 | 91 | 13 | 145 | 1.66e-27 | 108 |
| MS.gene98315.t1 | AT1G57560 | 40.458 | 131 | 36 | 1 | 1 | 89 | 1 | 131 | 2.34e-27 | 108 |
| MS.gene98315.t1 | AT1G06180 | 46.552 | 116 | 20 | 1 | 1 | 74 | 1 | 116 | 1.11e-26 | 105 |
| MS.gene98315.t1 | AT1G74650 | 40.876 | 137 | 38 | 2 | 1 | 94 | 1 | 137 | 1.29e-26 | 107 |
| MS.gene98315.t1 | AT3G47600 | 44.538 | 119 | 24 | 1 | 1 | 77 | 1 | 119 | 2.34e-26 | 106 |
| MS.gene98315.t1 | AT1G56160 | 44.348 | 115 | 22 | 1 | 2 | 74 | 4 | 118 | 1.31e-25 | 103 |
| MS.gene98315.t1 | AT5G49330 | 43.966 | 116 | 23 | 1 | 1 | 74 | 1 | 116 | 1.96e-25 | 104 |
| MS.gene98315.t1 | AT4G01680 | 40.152 | 132 | 37 | 1 | 1 | 90 | 1 | 132 | 2.79e-25 | 101 |
| MS.gene98315.t1 | AT5G62470 | 43.220 | 118 | 26 | 1 | 1 | 77 | 1 | 118 | 3.18e-25 | 103 |
| MS.gene98315.t1 | AT1G08810 | 43.966 | 116 | 23 | 1 | 1 | 74 | 1 | 116 | 3.60e-25 | 102 |
| MS.gene98315.t1 | AT5G62470 | 42.857 | 119 | 26 | 1 | 1 | 77 | 1 | 119 | 4.54e-25 | 103 |
| MS.gene98315.t1 | AT3G28910 | 43.443 | 122 | 27 | 1 | 1 | 80 | 1 | 122 | 6.39e-25 | 102 |
| MS.gene98315.t1 | AT1G79180 | 42.735 | 117 | 25 | 1 | 2 | 76 | 4 | 120 | 7.90e-25 | 101 |
| MS.gene98315.t1 | AT4G01680 | 40.152 | 132 | 37 | 1 | 1 | 90 | 1 | 132 | 8.79e-25 | 102 |
| MS.gene98315.t1 | AT1G74430 | 40.769 | 130 | 35 | 1 | 1 | 88 | 1 | 130 | 2.62e-24 | 99.8 |
| MS.gene98315.t1 | AT3G62610 | 43.103 | 116 | 24 | 1 | 1 | 74 | 1 | 116 | 5.94e-24 | 100 |
| MS.gene98315.t1 | AT3G12720 | 40.496 | 121 | 30 | 1 | 6 | 84 | 16 | 136 | 6.99e-24 | 99.4 |
| MS.gene98315.t1 | AT2G47460 | 40.000 | 135 | 39 | 1 | 1 | 93 | 1 | 135 | 8.99e-24 | 100 |
| MS.gene98315.t1 | AT5G23000 | 39.831 | 118 | 28 | 2 | 1 | 75 | 1 | 118 | 9.19e-23 | 96.7 |
| MS.gene98315.t1 | AT3G28470 | 41.045 | 134 | 37 | 1 | 1 | 92 | 1 | 134 | 1.47e-22 | 95.9 |
| MS.gene98315.t1 | AT2G36890 | 42.373 | 118 | 25 | 2 | 1 | 75 | 1 | 118 | 1.81e-22 | 95.5 |
| MS.gene98315.t1 | AT2G36890 | 42.373 | 118 | 25 | 2 | 1 | 75 | 42 | 159 | 2.34e-22 | 95.9 |
| MS.gene98315.t1 | AT3G12820 | 40.517 | 116 | 27 | 1 | 3 | 76 | 5 | 120 | 2.49e-22 | 93.6 |
| MS.gene98315.t1 | AT1G16490 | 40.870 | 115 | 26 | 1 | 2 | 74 | 4 | 118 | 2.58e-22 | 94.4 |
| MS.gene98315.t1 | AT5G57620 | 41.525 | 118 | 26 | 2 | 1 | 75 | 1 | 118 | 6.23e-22 | 94.4 |
| MS.gene98315.t1 | AT3G49690 | 42.373 | 118 | 25 | 2 | 1 | 75 | 1 | 118 | 6.64e-22 | 94.0 |
| MS.gene98315.t1 | AT5G65790 | 41.525 | 118 | 26 | 2 | 1 | 75 | 1 | 118 | 7.19e-22 | 94.7 |
| MS.gene98315.t1 | AT1G18710 | 39.062 | 128 | 36 | 1 | 1 | 86 | 1 | 128 | 1.33e-21 | 92.4 |
| MS.gene98315.t1 | AT3G13890 | 37.607 | 117 | 31 | 1 | 1 | 75 | 1 | 117 | 1.28e-20 | 91.3 |
| MS.gene98315.t1 | AT4G37780 | 38.983 | 118 | 29 | 2 | 1 | 75 | 1 | 118 | 2.58e-20 | 89.7 |
| MS.gene98315.t1 | AT1G63910 | 34.328 | 134 | 46 | 1 | 1 | 92 | 1 | 134 | 4.06e-20 | 89.7 |
| MS.gene98315.t1 | AT5G15310 | 46.809 | 94 | 43 | 3 | 47 | 138 | 10 | 98 | 3.60e-19 | 85.5 |
| MS.gene98315.t1 | AT3G13890 | 34.127 | 126 | 32 | 1 | 1 | 75 | 1 | 126 | 1.20e-18 | 85.5 |
| MS.gene98315.t1 | AT4G28110 | 70.732 | 41 | 12 | 0 | 47 | 87 | 5 | 45 | 8.75e-16 | 74.7 |
| MS.gene98315.t1 | AT5G40350 | 36.607 | 112 | 29 | 1 | 9 | 78 | 14 | 125 | 1.16e-15 | 74.7 |
| MS.gene98315.t1 | AT5G61420 | 72.500 | 40 | 11 | 0 | 47 | 86 | 10 | 49 | 2.21e-15 | 75.5 |
| MS.gene98315.t1 | AT1G22640 | 48.649 | 74 | 27 | 2 | 12 | 85 | 8 | 70 | 3.94e-15 | 73.2 |
| MS.gene98315.t1 | AT5G52260 | 33.099 | 142 | 48 | 3 | 13 | 109 | 13 | 152 | 5.63e-15 | 73.9 |
| MS.gene98315.t1 | AT5G26660 | 49.333 | 75 | 27 | 2 | 12 | 86 | 34 | 97 | 8.47e-15 | 73.9 |
| MS.gene98315.t1 | AT5G14750 | 34.559 | 136 | 39 | 4 | 13 | 105 | 17 | 145 | 3.54e-14 | 70.5 |
| MS.gene98315.t1 | AT1G79180 | 57.778 | 45 | 19 | 0 | 2 | 46 | 4 | 48 | 5.84e-14 | 71.6 |
| MS.gene98315.t1 | AT1G22640 | 66.667 | 39 | 13 | 0 | 47 | 85 | 17 | 55 | 4.25e-13 | 67.0 |
| MS.gene98315.t1 | AT5G14340 | 60.000 | 45 | 18 | 0 | 47 | 91 | 11 | 55 | 8.81e-13 | 66.2 |
| MS.gene98315.t1 | AT4G01680 | 39.024 | 82 | 47 | 1 | 1 | 79 | 1 | 82 | 1.49e-12 | 67.8 |
| MS.gene98315.t1 | AT4G01680 | 43.038 | 79 | 34 | 1 | 12 | 90 | 77 | 144 | 7.68e-12 | 65.5 |
| MS.gene98315.t1 | AT1G74430 | 61.905 | 42 | 16 | 0 | 47 | 88 | 20 | 61 | 4.63e-12 | 64.7 |
| MS.gene98315.t1 | AT3G47600 | 50.746 | 67 | 22 | 3 | 11 | 77 | 58 | 113 | 4.75e-12 | 66.2 |
| MS.gene98315.t1 | AT1G18960 | 40.000 | 90 | 43 | 3 | 3 | 92 | 49 | 127 | 6.87e-12 | 65.5 |
| MS.gene98315.t1 | AT3G12820 | 46.970 | 66 | 24 | 1 | 11 | 76 | 18 | 72 | 6.89e-12 | 63.9 |
| MS.gene98315.t1 | AT1G74650 | 52.830 | 53 | 24 | 1 | 43 | 94 | 9 | 61 | 1.72e-11 | 63.9 |
| MS.gene98315.t1 | AT1G74650 | 55.102 | 49 | 21 | 1 | 47 | 94 | 8 | 56 | 3.73e-11 | 62.8 |
| MS.gene98315.t1 | AT3G46130 | 33.645 | 107 | 29 | 1 | 9 | 73 | 6 | 112 | 4.71e-11 | 62.4 |
| MS.gene98315.t1 | AT1G71030 | 55.814 | 43 | 19 | 0 | 43 | 85 | 39 | 81 | 8.11e-11 | 60.5 |
| MS.gene98315.t1 | AT5G59780 | 47.619 | 63 | 22 | 2 | 11 | 73 | 39 | 90 | 8.73e-11 | 61.2 |
| MS.gene98315.t1 | AT1G71030 | 55.814 | 43 | 19 | 0 | 43 | 85 | 53 | 95 | 9.40e-11 | 60.8 |
Find 67 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGAGATAAAGAATTTC+TGG | 0.217847 | 3.1:+61067026 | MS.gene98315:CDS |
| TTCTTCCATGTTTGTGATCA+TGG | 0.274425 | 3.1:-61067335 | None:intergenic |
| AGCAAACATGACAGAACTTA+TGG | 0.291406 | 3.1:+61067150 | MS.gene98315:CDS |
| GAGTCCAAGGTCCTTTCTTT+AGG | 0.299866 | 3.1:-61066221 | None:intergenic |
| TAAGATAAATCATGCATAAT+GGG | 0.300700 | 3.1:-61067754 | None:intergenic |
| ATCTCATTATCTGTTCTTCC+AGG | 0.321841 | 3.1:-61067013 | None:intergenic |
| GACCCTCTCCAGTATCTTAT+TGG | 0.336984 | 3.1:+61067710 | MS.gene98315:CDS |
| GCATTTAGAGGAACAGATAT+TGG | 0.337009 | 3.1:-61067625 | None:intergenic |
| GATTGTGTTTAATAAACTTA+AGG | 0.341619 | 3.1:-61067365 | None:intergenic |
| TTAAGATAAATCATGCATAA+TGG | 0.364715 | 3.1:-61067755 | None:intergenic |
| ATTGTGTTTAATAAACTTAA+GGG | 0.382518 | 3.1:-61067364 | None:intergenic |
| TGTGAAAGAGAACATAATAA+TGG | 0.389720 | 3.1:+61067393 | MS.gene98315:CDS |
| GTGGAAACAAGATCAGTTCT+TGG | 0.391507 | 3.1:-61067106 | None:intergenic |
| ATATACAAACCAGCTAGCTT+AGG | 0.400759 | 3.1:-61066309 | None:intergenic |
| GTTCTTGGTTGATGAGTCAT+TGG | 0.401091 | 3.1:-61067091 | None:intergenic |
| TTTGCTAAAGCTAGTAGATA+TGG | 0.401581 | 3.1:-61067133 | None:intergenic |
| TTCATCAACTGTTGCAAAGT+TGG | 0.405862 | 3.1:-61067569 | None:intergenic |
| AGTTCAGACCAATAAGATAC+TGG | 0.423026 | 3.1:-61067718 | None:intergenic |
| AATAATGGACTGTTCACAAC+TGG | 0.429961 | 3.1:+61067408 | MS.gene98315:CDS |
| ATCTGTTCCTCTAAATGCTA+TGG | 0.430587 | 3.1:+61067630 | MS.gene98315:CDS |
| GAAATCCCCATAGCATTTAG+AGG | 0.431719 | 3.1:-61067637 | None:intergenic |
| AAGATTGGAGTAAATATTGA+AGG | 0.443048 | 3.1:-61067264 | None:intergenic |
| ATTAATAATAATAATTCCTA+TGG | 0.445436 | 3.1:+61067304 | MS.gene98315:CDS |
| AGCAACATGGCCATGGAAGT+TGG | 0.453352 | 3.1:+61066277 | MS.gene98315:CDS |
| TTATAGAAGAATTTGAAGAT+TGG | 0.453453 | 3.1:-61067279 | None:intergenic |
| TATACAAACCAGCTAGCTTA+GGG | 0.459441 | 3.1:-61066308 | None:intergenic |
| TCTAGCTATGGAGGAGGAGG+AGG | 0.460845 | 3.1:+61067685 | MS.gene98315:CDS |
| AGCTATGGAGGAGGAGGAGG+AGG | 0.461006 | 3.1:+61067688 | MS.gene98315:CDS |
| TCTGTTCCTCTAAATGCTAT+GGG | 0.463500 | 3.1:+61067631 | MS.gene98315:CDS |
| TGATCTTCTTCAGGAGTCCA+AGG | 0.474736 | 3.1:-61066234 | None:intergenic |
| AGCAGCTGCACTTCTAGCTA+TGG | 0.500161 | 3.1:+61067673 | MS.gene98315:CDS |
| TGAAAGAGACTTGTTGTTGT+GGG | 0.508365 | 3.1:-61067498 | None:intergenic |
| ACAGATATTGGAGCAGAAGA+TGG | 0.509435 | 3.1:-61067613 | None:intergenic |
| AGCACACTTTGGTGGTGGAG+TGG | 0.513813 | 3.1:-61067460 | None:intergenic |
| AGAGCACTCCCTAAGCTAGC+TGG | 0.515419 | 3.1:+61066300 | MS.gene98315:CDS |
| ATCATCATAATCAGTCATCA+TGG | 0.518139 | 3.1:+61067173 | MS.gene98315:CDS |
| GATGAGAGTGGCCTAAAGAA+AGG | 0.535518 | 3.1:+61066210 | MS.gene98315:CDS |
| GCAATTGCCACACATCTACC+TGG | 0.544495 | 3.1:+61066995 | MS.gene98315:CDS |
| AATGCTATGGGGATTTCAGC+AGG | 0.548148 | 3.1:+61067643 | MS.gene98315:CDS |
| TAAAGCTAGTAGATATGGTA+TGG | 0.550765 | 3.1:-61067128 | None:intergenic |
| AAAAGTGGGGTAGCACACTT+TGG | 0.555610 | 3.1:-61067471 | None:intergenic |
| GGGGTAGCACACTTTGGTGG+TGG | 0.564100 | 3.1:-61067465 | None:intergenic |
| ACTTCTAGCTATGGAGGAGG+AGG | 0.567377 | 3.1:+61067682 | MS.gene98315:CDS |
| AGGCCACTCTCATCACAACA+TGG | 0.571440 | 3.1:-61066201 | None:intergenic |
| TGCACTTCTAGCTATGGAGG+AGG | 0.572187 | 3.1:+61067679 | MS.gene98315:CDS |
| CAGTTGATGAAACATCATCA+TGG | 0.575439 | 3.1:+61067581 | MS.gene98315:CDS |
| CACATTCAGCAACATGGCCA+TGG | 0.584236 | 3.1:+61066270 | MS.gene98315:CDS |
| GGAGTGCTCTCCAACTTCCA+TGG | 0.591428 | 3.1:-61066287 | None:intergenic |
| TCATCATAATCAGTCATCAT+GGG | 0.591481 | 3.1:+61067174 | MS.gene98315:CDS |
| TTGAATAATGAACAAAGTCA+AGG | 0.593810 | 3.1:+61067535 | MS.gene98315:CDS |
| CTGAAAGAGACTTGTTGTTG+TGG | 0.596864 | 3.1:-61067499 | None:intergenic |
| AGCTGCACTTCTAGCTATGG+AGG | 0.598375 | 3.1:+61067676 | MS.gene98315:CDS |
| GGCCACTCTCATCACAACAT+GGG | 0.598870 | 3.1:-61066200 | None:intergenic |
| GTGGCCTAAAGAAAGGACCT+TGG | 0.604603 | 3.1:+61066217 | MS.gene98315:CDS |
| AGTGGGGTAGCACACTTTGG+TGG | 0.613172 | 3.1:-61067468 | None:intergenic |
| AGCTAGTAGATATGGTATGG+TGG | 0.620436 | 3.1:-61067125 | None:intergenic |
| AAGATAAATCATGCATAATG+GGG | 0.630533 | 3.1:-61067753 | None:intergenic |
| AAATGCCATGATCACAAACA+TGG | 0.633810 | 3.1:+61067330 | MS.gene98315:CDS |
| GTTGAACACATTCAGCAACA+TGG | 0.636416 | 3.1:+61066264 | MS.gene98315:CDS |
| GACCAATAAGATACTGGAGA+GGG | 0.637113 | 3.1:-61067712 | None:intergenic |
| GCCACTCTCATCACAACATG+GGG | 0.657364 | 3.1:-61066199 | None:intergenic |
| CTGTTCCTCTAAATGCTATG+GGG | 0.667441 | 3.1:+61067632 | MS.gene98315:CDS |
| ATTAGTAACACACAATGGGA+AGG | 0.669235 | 3.1:+61066175 | None:intergenic |
| AGACCAATAAGATACTGGAG+AGG | 0.671942 | 3.1:-61067713 | None:intergenic |
| AATAATGAACAAAGTCAAGG+TGG | 0.687399 | 3.1:+61067538 | MS.gene98315:CDS |
| TGTTCTTCCAGGTAGATGTG+TGG | 0.695449 | 3.1:-61067002 | None:intergenic |
| TCCCCATGTTGTGATGAGAG+TGG | 0.715025 | 3.1:+61066198 | MS.gene98315:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAATAATAATTCCTA+TGG | + | chr3.1:61067304-61067323 | MS.gene98315:CDS | 10.0% |
| !! | AAGAAAAAAAAATATGAATG+AGG | - | chr3.1:61066398-61066417 | None:intergenic | 15.0% |
| !! | ATTGTGTTTAATAAACTTAA+GGG | - | chr3.1:61067367-61067386 | None:intergenic | 15.0% |
| !! | TTGCAATAACTATTAATATA+TGG | + | chr3.1:61066350-61066369 | MS.gene98315:intron | 15.0% |
| !!! | AAGATTTTTTTTTTTTTTGG+TGG | - | chr3.1:61066659-61066678 | None:intergenic | 15.0% |
| !!! | ATTTTAAGATTTGATATCTT+TGG | - | chr3.1:61066633-61066652 | None:intergenic | 15.0% |
| !! | ATAATGAGATAAAGAATTTC+TGG | + | chr3.1:61067026-61067045 | MS.gene98315:CDS | 20.0% |
| !! | CATAATTCAAATGATAGTAT+TGG | - | chr3.1:61066692-61066711 | None:intergenic | 20.0% |
| !! | GATTGTGTTTAATAAACTTA+AGG | - | chr3.1:61067368-61067387 | None:intergenic | 20.0% |
| !! | TAAGATAAATCATGCATAAT+GGG | - | chr3.1:61067757-61067776 | None:intergenic | 20.0% |
| !! | TTAAGATAAATCATGCATAA+TGG | - | chr3.1:61067758-61067777 | None:intergenic | 20.0% |
| !! | TTATAGAAGAATTTGAAGAT+TGG | - | chr3.1:61067282-61067301 | None:intergenic | 20.0% |
| ! | AAGATAAATCATGCATAATG+GGG | - | chr3.1:61067756-61067775 | None:intergenic | 25.0% |
| ! | AAGATTGGAGTAAATATTGA+AGG | - | chr3.1:61067267-61067286 | None:intergenic | 25.0% |
| ! | AATATCAGGCCTTAAATAAT+TGG | - | chr3.1:61066472-61066491 | None:intergenic | 25.0% |
| ! | ATAGTTATTGCAAGATATAG+AGG | - | chr3.1:61066343-61066362 | None:intergenic | 25.0% |
| ! | TAGTACAAATGAAATTCTCT+AGG | + | chr3.1:61066898-61066917 | MS.gene98315:intron | 25.0% |
| ! | TATCTTTGGTTATATTTGCT+AGG | - | chr3.1:61066619-61066638 | None:intergenic | 25.0% |
| ! | TGTGAAAGAGAACATAATAA+TGG | + | chr3.1:61067393-61067412 | MS.gene98315:CDS | 25.0% |
| ! | TTGAATAATGAACAAAGTCA+AGG | + | chr3.1:61067535-61067554 | MS.gene98315:CDS | 25.0% |
| !! | AAGAAAAAGTTGATTCAGAT+GGG | + | chr3.1:61067061-61067080 | MS.gene98315:CDS | 25.0% |
| !! | AATTTTCCTCTCTTAATATC+AGG | - | chr3.1:61066486-61066505 | None:intergenic | 25.0% |
| !!! | TAAACGAGTTGAATTTTCAA+CGG | - | chr3.1:61066828-61066847 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTTGCAATTTTGC+AGG | + | chr3.1:61066408-61066427 | MS.gene98315:intron | 25.0% |
| AATAATGAACAAAGTCAAGG+TGG | + | chr3.1:61067538-61067557 | MS.gene98315:CDS | 30.0% | |
| ATCATCATAATCAGTCATCA+TGG | + | chr3.1:61067173-61067192 | MS.gene98315:CDS | 30.0% | |
| TAAAGCTAGTAGATATGGTA+TGG | - | chr3.1:61067131-61067150 | None:intergenic | 30.0% | |
| TAAGGTGGACCAATTATTTA+AGG | + | chr3.1:61066460-61066479 | MS.gene98315:intron | 30.0% | |
| TCATCATAATCAGTCATCAT+GGG | + | chr3.1:61067174-61067193 | MS.gene98315:CDS | 30.0% | |
| TTTGCTAAAGCTAGTAGATA+TGG | - | chr3.1:61067136-61067155 | None:intergenic | 30.0% | |
| ! | AGGAAAATTTTCTCAAGAAG+AGG | + | chr3.1:61066497-61066516 | MS.gene98315:intron | 30.0% |
| ! | GAAGAAAAAGTTGATTCAGA+TGG | + | chr3.1:61067060-61067079 | MS.gene98315:CDS | 30.0% |
| !!! | TTGGTCTGAACTTTTTTTTG+AGG | + | chr3.1:61067729-61067748 | MS.gene98315:CDS | 30.0% |
| AAAGTACGTACTTGTTTCCA+AGG | - | chr3.1:61066551-61066570 | None:intergenic | 35.0% | |
| AAATGCCATGATCACAAACA+TGG | + | chr3.1:61067330-61067349 | MS.gene98315:CDS | 35.0% | |
| AATTGCTGACCATCTGTTAA+AGG | - | chr3.1:61066981-61067000 | None:intergenic | 35.0% | |
| AGCAAACATGACAGAACTTA+TGG | + | chr3.1:61067150-61067169 | MS.gene98315:CDS | 35.0% | |
| AGTTCAGACCAATAAGATAC+TGG | - | chr3.1:61067721-61067740 | None:intergenic | 35.0% | |
| ATAGATGTGGAAAGAGTTGT+AGG | + | chr3.1:61066436-61066455 | MS.gene98315:intron | 35.0% | |
| ATCTCATTATCTGTTCTTCC+AGG | - | chr3.1:61067016-61067035 | None:intergenic | 35.0% | |
| ATCTGTTCCTCTAAATGCTA+TGG | + | chr3.1:61067630-61067649 | MS.gene98315:CDS | 35.0% | |
| CTATATGCACCTTTAACAGA+TGG | + | chr3.1:61066969-61066988 | MS.gene98315:intron | 35.0% | |
| CTTCATCTTCATTCAATCCT+TGG | + | chr3.1:61066531-61066550 | MS.gene98315:intron | 35.0% | |
| GCATTTAGAGGAACAGATAT+TGG | - | chr3.1:61067628-61067647 | None:intergenic | 35.0% | |
| TCTGTTCCTCTAAATGCTAT+GGG | + | chr3.1:61067631-61067650 | MS.gene98315:CDS | 35.0% | |
| TTAAGGCCTGATATTAAGAG+AGG | + | chr3.1:61066477-61066496 | MS.gene98315:intron | 35.0% | |
| TTCATCAACTGTTGCAAAGT+TGG | - | chr3.1:61067572-61067591 | None:intergenic | 35.0% | |
| TTCTTCCATGTTTGTGATCA+TGG | - | chr3.1:61067338-61067357 | None:intergenic | 35.0% | |
| TTGTTGTGGGTCTAAAAAGT+GGG | - | chr3.1:61067488-61067507 | None:intergenic | 35.0% | |
| TTTGCAGGTCTTAATAGATG+TGG | + | chr3.1:61066423-61066442 | MS.gene98315:intron | 35.0% | |
| ! | ATATACAAACCAGCTAGCTT+AGG | - | chr3.1:61066312-61066331 | None:intergenic | 35.0% |
| ! | TATACAAACCAGCTAGCTTA+GGG | - | chr3.1:61066311-61066330 | None:intergenic | 35.0% |
| !! | AATAATGGACTGTTCACAAC+TGG | + | chr3.1:61067408-61067427 | MS.gene98315:CDS | 35.0% |
| !! | CAGTTGATGAAACATCATCA+TGG | + | chr3.1:61067581-61067600 | MS.gene98315:CDS | 35.0% |
| !! | TGAAAGAGACTTGTTGTTGT+GGG | - | chr3.1:61067501-61067520 | None:intergenic | 35.0% |
| !!! | ACTAGCTTTTGATCTTCTTC+AGG | - | chr3.1:61066246-61066265 | None:intergenic | 35.0% |
| ACAGATATTGGAGCAGAAGA+TGG | - | chr3.1:61067616-61067635 | None:intergenic | 40.0% | |
| AGACCAATAAGATACTGGAG+AGG | - | chr3.1:61067716-61067735 | None:intergenic | 40.0% | |
| AGCTAGTAGATATGGTATGG+TGG | - | chr3.1:61067128-61067147 | None:intergenic | 40.0% | |
| CTGTTCCTCTAAATGCTATG+GGG | + | chr3.1:61067632-61067651 | MS.gene98315:CDS | 40.0% | |
| GAAATCCCCATAGCATTTAG+AGG | - | chr3.1:61067640-61067659 | None:intergenic | 40.0% | |
| GACCAATAAGATACTGGAGA+GGG | - | chr3.1:61067715-61067734 | None:intergenic | 40.0% | |
| GTGGAAACAAGATCAGTTCT+TGG | - | chr3.1:61067109-61067128 | None:intergenic | 40.0% | |
| GTTGAACACATTCAGCAACA+TGG | + | chr3.1:61066264-61066283 | MS.gene98315:CDS | 40.0% | |
| GTTGTTGTGGGTCTAAAAAG+TGG | - | chr3.1:61067489-61067508 | None:intergenic | 40.0% | |
| TGTTGTGGGTCTAAAAAGTG+GGG | - | chr3.1:61067487-61067506 | None:intergenic | 40.0% | |
| ! | GATCATGGCATTTTGTCCAT+AGG | - | chr3.1:61067323-61067342 | None:intergenic | 40.0% |
| !! | CTGAAAGAGACTTGTTGTTG+TGG | - | chr3.1:61067502-61067521 | None:intergenic | 40.0% |
| !! | GTTCTTGGTTGATGAGTCAT+TGG | - | chr3.1:61067094-61067113 | None:intergenic | 40.0% |
| AAAAGTGGGGTAGCACACTT+TGG | - | chr3.1:61067474-61067493 | None:intergenic | 45.0% | |
| AATGCTATGGGGATTTCAGC+AGG | + | chr3.1:61067643-61067662 | MS.gene98315:CDS | 45.0% | |
| GAAAGAGTTGTAGGCTAAGG+TGG | + | chr3.1:61066445-61066464 | MS.gene98315:intron | 45.0% | |
| GACCCTCTCCAGTATCTTAT+TGG | + | chr3.1:61067710-61067729 | MS.gene98315:CDS | 45.0% | |
| GAGTCCAAGGTCCTTTCTTT+AGG | - | chr3.1:61066224-61066243 | None:intergenic | 45.0% | |
| GATGAGAGTGGCCTAAAGAA+AGG | + | chr3.1:61066210-61066229 | MS.gene98315:CDS | 45.0% | |
| GTGGAAAGAGTTGTAGGCTA+AGG | + | chr3.1:61066442-61066461 | MS.gene98315:intron | 45.0% | |
| TGATCTTCTTCAGGAGTCCA+AGG | - | chr3.1:61066237-61066256 | None:intergenic | 45.0% | |
| TGTTCTTCCAGGTAGATGTG+TGG | - | chr3.1:61067005-61067024 | None:intergenic | 45.0% | |
| !! | AAATAAATAAATTAAAGTTA+TGG | - | chr3.1:61066579-61066598 | None:intergenic | 5.0% |
| !!! | TTTAAGATTTTTTTTTTTTT+TGG | - | chr3.1:61066662-61066681 | None:intergenic | 5.0% |
| AGCAACATGGCCATGGAAGT+TGG | + | chr3.1:61066277-61066296 | MS.gene98315:CDS | 50.0% | |
| AGGCCACTCTCATCACAACA+TGG | - | chr3.1:61066204-61066223 | None:intergenic | 50.0% | |
| CACATTCAGCAACATGGCCA+TGG | + | chr3.1:61066270-61066289 | MS.gene98315:CDS | 50.0% | |
| GCAATTGCCACACATCTACC+TGG | + | chr3.1:61066995-61067014 | MS.gene98315:CDS | 50.0% | |
| GCCACTCTCATCACAACATG+GGG | - | chr3.1:61066202-61066221 | None:intergenic | 50.0% | |
| GGCCACTCTCATCACAACAT+GGG | - | chr3.1:61066203-61066222 | None:intergenic | 50.0% | |
| GTGGCCTAAAGAAAGGACCT+TGG | + | chr3.1:61066217-61066236 | MS.gene98315:CDS | 50.0% | |
| TCCCCATGTTGTGATGAGAG+TGG | + | chr3.1:61066198-61066217 | MS.gene98315:CDS | 50.0% | |
| ! | ACTTCTAGCTATGGAGGAGG+AGG | + | chr3.1:61067682-61067701 | MS.gene98315:CDS | 50.0% |
| ! | AGCAGCTGCACTTCTAGCTA+TGG | + | chr3.1:61067673-61067692 | MS.gene98315:CDS | 50.0% |
| ! | AGCTGCACTTCTAGCTATGG+AGG | + | chr3.1:61067676-61067695 | MS.gene98315:CDS | 50.0% |
| ! | TGCACTTCTAGCTATGGAGG+AGG | + | chr3.1:61067679-61067698 | MS.gene98315:CDS | 50.0% |
| AGTGGGGTAGCACACTTTGG+TGG | - | chr3.1:61067471-61067490 | None:intergenic | 55.0% | |
| TCTAGCTATGGAGGAGGAGG+AGG | + | chr3.1:61067685-61067704 | MS.gene98315:CDS | 55.0% | |
| ! | AGAGCACTCCCTAAGCTAGC+TGG | + | chr3.1:61066300-61066319 | MS.gene98315:CDS | 55.0% |
| ! | GGAGTGCTCTCCAACTTCCA+TGG | - | chr3.1:61066290-61066309 | None:intergenic | 55.0% |
| !! | AGCACACTTTGGTGGTGGAG+TGG | - | chr3.1:61067463-61067482 | None:intergenic | 55.0% |
| AGCTATGGAGGAGGAGGAGG+AGG | + | chr3.1:61067688-61067707 | MS.gene98315:CDS | 60.0% | |
| GGGGTAGCACACTTTGGTGG+TGG | - | chr3.1:61067468-61067487 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61066189 | 61067777 | 61066189 | ID=MS.gene98315 |
| chr3.1 | mRNA | 61066189 | 61067777 | 61066189 | ID=MS.gene98315.t1;Parent=MS.gene98315 |
| chr3.1 | exon | 61066189 | 61066325 | 61066189 | ID=MS.gene98315.t1.exon1;Parent=MS.gene98315.t1 |
| chr3.1 | CDS | 61066189 | 61066325 | 61066189 | ID=cds.MS.gene98315.t1;Parent=MS.gene98315.t1 |
| chr3.1 | exon | 61066988 | 61067777 | 61066988 | ID=MS.gene98315.t1.exon2;Parent=MS.gene98315.t1 |
| chr3.1 | CDS | 61066988 | 61067777 | 61066988 | ID=cds.MS.gene98315.t1;Parent=MS.gene98315.t1 |
| Gene Sequence |
| Protein sequence |
