Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98380.t1 | GAU48500.1 | 43.4 | 272 | 12 | 1 | 6 | 135 | 530 | 801 | 5.00E-44 | 187.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98380.t1 | A0A2Z6PDI0 | 43.4 | 272 | 12 | 1 | 6 | 135 | 530 | 801 | 3.6e-44 | 187.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050807 | MS.gene98380 | -0.806783 | 6.96E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene98380 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene98380 | -0.803829 | 2.89E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene98380 | -0.816223 | 6.18E-52 | -1.69E-46 |
| MS.gene058548 | MS.gene98380 | -0.808351 | 3.23E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene98380 | -0.800355 | 1.50E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAGTTTTTGGTTTAA+GGG | - | 6900:7484-7503 | MS.gene98380:intron | 15.0% |
| !!! | AGTTTTTAGCCTTAAAAAAA+AGG | - | 6900:8108-8127 | MS.gene98380:intron | 20.0% |
| !!! | CATTTTTAGTTTTTGGTTTA+AGG | - | 6900:7483-7502 | MS.gene98380:intron | 20.0% |
| !!! | GTTTTTAGCCTTAAAAAAAA+GGG | - | 6900:8109-8128 | MS.gene98380:intron | 20.0% |
| !!! | TTTAGATTTTTTAGTAGGTT+GGG | - | 6900:7808-7827 | MS.gene98380:intron | 20.0% |
| ! | CAACCTACTAAAAAATCTAA+AGG | + | 6900:7809-7828 | None:intergenic | 25.0% |
| ! | TTTCATCAAATGATGCATAT+GGG | + | 6900:8350-8369 | None:intergenic | 25.0% |
| !!! | AAGCCTTTAGATTTTTTAGT+AGG | - | 6900:7803-7822 | MS.gene98380:intron | 25.0% |
| !!! | CTTTAGATTTTTTAGTAGGT+TGG | - | 6900:7807-7826 | MS.gene98380:intron | 25.0% |
| AAGGCATATTTCGAATATAG+AGG | + | 6900:7274-7293 | None:intergenic | 30.0% | |
| CTTTCATCAAATGATGCATA+TGG | + | 6900:8351-8370 | None:intergenic | 30.0% | |
| TATTCGAAATATGCCTTTCT+AGG | - | 6900:7277-7296 | MS.gene98380:CDS | 30.0% | |
| TTCTGCTTCTTATCTAGATA+GGG | - | 6900:7959-7978 | MS.gene98380:intron | 30.0% | |
| !!! | CAAGGCTCATTTTTAGTTTT+TGG | - | 6900:7476-7495 | MS.gene98380:intron | 30.0% |
| !!! | TTTAGTTTTTGGTTTAAGGG+CGG | - | 6900:7487-7506 | MS.gene98380:intron | 30.0% |
| CAAATCAAGATGAGACGTAA+CGG | - | 6900:8177-8196 | MS.gene98380:intron | 35.0% | |
| CAGCTGGTATAGATGAATAA+AGG | - | 6900:8011-8030 | MS.gene98380:intron | 35.0% | |
| CTAACATAGAAAGAGATTCC+CGG | - | 6900:8250-8269 | MS.gene98380:intron | 35.0% | |
| CTGGTATAGATGAATAAAGG+CGG | - | 6900:8014-8033 | MS.gene98380:intron | 35.0% | |
| GTCTCTTATGAAGTCTCTAT+TGG | - | 6900:7325-7344 | MS.gene98380:intron | 35.0% | |
| GTTCTGCTTCTTATCTAGAT+AGG | - | 6900:7958-7977 | MS.gene98380:intron | 35.0% | |
| TAAAAACTCATCAGTCAGCT+CGG | + | 6900:8096-8115 | None:intergenic | 35.0% | |
| TCTCTTTCTATGTTAGCTAG+CGG | + | 6900:8246-8265 | None:intergenic | 35.0% | |
| TCTGCTTCTTATCTAGATAG+GGG | - | 6900:7960-7979 | MS.gene98380:intron | 35.0% | |
| TGCTTTCTATCAGTCAAAAG+CGG | - | 6900:7072-7091 | MS.gene98380:CDS | 35.0% | |
| TGGTATAGATGAATAAAGGC+GGG | - | 6900:8015-8034 | MS.gene98380:intron | 35.0% | |
| !! | ACATAGAGACTTTTGCTATC+CGG | + | 6900:8272-8291 | None:intergenic | 35.0% |
| !!! | TGAGAGAGCCCTTTTTTTTA+AGG | + | 6900:8120-8139 | None:intergenic | 35.0% |
| !!! | TTAGTTTTTGGTTTAAGGGC+GGG | - | 6900:7488-7507 | MS.gene98380:intron | 35.0% |
| ACGGGACCTATTCTCTTAAT+AGG | - | 6900:8046-8065 | MS.gene98380:intron | 40.0% | |
| AGATCGTAATGCTCCTAGAA+AGG | + | 6900:7293-7312 | None:intergenic | 40.0% | |
| ATAAGGGTCATTCTCCAAAC+GGG | - | 6900:7772-7791 | MS.gene98380:intron | 40.0% | |
| ATTACGATCTGCAGCTCAAA+TGG | - | 6900:7303-7322 | MS.gene98380:intron | 40.0% | |
| CATAAGGGTCATTCTCCAAA+CGG | - | 6900:7771-7790 | MS.gene98380:intron | 40.0% | |
| CGTTACGTCTCATCTTGATT+TGG | + | 6900:8179-8198 | None:intergenic | 40.0% | |
| CTCGCAGTTCAGATAAGATT+CGG | + | 6900:7731-7750 | None:intergenic | 40.0% | |
| CTCTTTCTATGTTAGCTAGC+GGG | + | 6900:8245-8264 | None:intergenic | 40.0% | |
| GACTTCCACGAAATGAAAAC+GGG | + | 6900:7905-7924 | None:intergenic | 40.0% | |
| GGACCTATTCTCTTAATAGG+CGG | - | 6900:8049-8068 | MS.gene98380:intron | 40.0% | |
| GGACTTCCACGAAATGAAAA+CGG | + | 6900:7906-7925 | None:intergenic | 40.0% | |
| GGTATGATCAACTCGTTGTT+GGG | - | 6900:7238-7257 | MS.gene98380:CDS | 40.0% | |
| TCTCTCATGTGAAGCTAACA+TGG | - | 6900:8133-8152 | MS.gene98380:intron | 40.0% | |
| TCTTTCTATGTTAGCTAGCG+GGG | + | 6900:8244-8263 | None:intergenic | 40.0% | |
| TTGCCGCCTATTAAGAGAAT+AGG | + | 6900:8055-8074 | None:intergenic | 40.0% | |
| !! | CATAGAGACTTTTGCTATCC+GGG | + | 6900:8271-8290 | None:intergenic | 40.0% |
| AATAGGCGGCAAAGCTGAAT+AGG | - | 6900:8063-8082 | MS.gene98380:intron | 45.0% | |
| ACTGACTAAGCCATGCCATA+AGG | - | 6900:7755-7774 | MS.gene98380:intron | 45.0% | |
| AGGGGCAAATCGTTCCTATT+GGG | - | 6900:7978-7997 | MS.gene98380:intron | 45.0% | |
| AGTACTCCGGGATATAAACC+AGG | - | 6900:7849-7868 | MS.gene98380:intron | 45.0% | |
| ATGCTCCTCACCAACCTTAA+CGG | - | 6900:8428-8447 | MS.gene98380:CDS | 45.0% | |
| ATTTATCTGATCAAGGGCCG+GGG | - | 6900:7514-7533 | MS.gene98380:intron | 45.0% | |
| CCTTTCTATTCCTCGGTAAG+CGG | + | 6900:7126-7145 | None:intergenic | 45.0% | |
| CGCTTACCGAGGAATAGAAA+GGG | - | 6900:7124-7143 | MS.gene98380:CDS | 45.0% | |
| CGGCAAAGCTGAATAGGAAA+GGG | - | 6900:8069-8088 | MS.gene98380:intron | 45.0% | |
| CGTTTGGAGAATGACCCTTA+TGG | + | 6900:7773-7792 | None:intergenic | 45.0% | |
| CTGACTAAGCCATGCCATAA+GGG | - | 6900:7756-7775 | MS.gene98380:intron | 45.0% | |
| CTTTCTATGTTAGCTAGCGG+GGG | + | 6900:8243-8262 | None:intergenic | 45.0% | |
| GAACCATGCTTTCAGAGAAG+TGG | - | 6900:7701-7720 | MS.gene98380:intron | 45.0% | |
| GATTTATCTGATCAAGGGCC+GGG | - | 6900:7513-7532 | MS.gene98380:intron | 45.0% | |
| GGATTTATCTGATCAAGGGC+CGG | - | 6900:7512-7531 | MS.gene98380:intron | 45.0% | |
| GGCAAAGCTGAATAGGAAAG+GGG | - | 6900:8070-8089 | MS.gene98380:intron | 45.0% | |
| GGGTATGATCAACTCGTTGT+TGG | - | 6900:7237-7256 | MS.gene98380:CDS | 45.0% | |
| GTACTCCGGGATATAAACCA+GGG | - | 6900:7850-7869 | MS.gene98380:intron | 45.0% | |
| TAGGGGCAAATCGTTCCTAT+TGG | - | 6900:7977-7996 | MS.gene98380:intron | 45.0% | |
| TATGTGAATCTCTTCCCGAC+AGG | - | 6900:8287-8306 | MS.gene98380:intron | 45.0% | |
| TCATGTGAAGCTAACATGGC+TGG | - | 6900:8137-8156 | MS.gene98380:intron | 45.0% | |
| TGAGCAGAAATCTCACTCAC+CGG | - | 6900:7589-7608 | MS.gene98380:intron | 45.0% | |
| TGCTCGTACGGTTCAAAGAA+GGG | - | 6900:7217-7236 | MS.gene98380:CDS | 45.0% | |
| TTACCGAGGAATAGAAAGGG+AGG | - | 6900:7127-7146 | MS.gene98380:CDS | 45.0% | |
| TTCCACGAAATGAAAACGGG+CGG | + | 6900:7902-7921 | None:intergenic | 45.0% | |
| TTTCATTTCGTGGAAGTCCC+CGG | - | 6900:7907-7926 | MS.gene98380:intron | 45.0% | |
| ! | GGGCGGATTTATCTGATCAA+GGG | - | 6900:7508-7527 | MS.gene98380:intron | 45.0% |
| ! | TAGTAGGTTGGGTGACAGAT+CGG | - | 6900:7819-7838 | MS.gene98380:intron | 45.0% |
| ! | TATATCCCGGAGTACTCCTA+TGG | + | 6900:7845-7864 | None:intergenic | 45.0% |
| ! | TCAAGATGAGACGTAACGGA+CGG | - | 6900:8181-8200 | MS.gene98380:intron | 45.0% |
| !!! | AGGAGCATTGTTTTGAGGGA+GGG | + | 6900:8416-8435 | None:intergenic | 45.0% |
| !!! | GGTGAGGAGCATTGTTTTGA+GGG | + | 6900:8420-8439 | None:intergenic | 45.0% |
| !!! | TGGTGAGGAGCATTGTTTTG+AGG | + | 6900:8421-8440 | None:intergenic | 45.0% |
| AACACTCGAACGTGAGAGCA+AGG | - | 6900:7627-7646 | MS.gene98380:intron | 50.0% | |
| AACCTTAACGGCCTTGGGTT+GGG | - | 6900:8440-8459 | MS.gene98380:CDS | 50.0% | |
| ACACTCGAACGTGAGAGCAA+GGG | - | 6900:7628-7647 | MS.gene98380:intron | 50.0% | |
| AGGAATAGAAAGGGAGGACC+GGG | - | 6900:7133-7152 | MS.gene98380:CDS | 50.0% | |
| CATCGTCGTATGCTCGACAT+TGG | + | 6900:7879-7898 | None:intergenic | 50.0% | |
| CCATGCTTTCAGAGAAGTGG+CGG | - | 6900:7704-7723 | MS.gene98380:intron | 50.0% | |
| CCGCTTACCGAGGAATAGAA+AGG | - | 6900:7123-7142 | MS.gene98380:CDS | 50.0% | |
| CGAGTGTTTGCTCGTCGTTT+AGG | + | 6900:7615-7634 | None:intergenic | 50.0% | |
| GAGAATAGGTCCCGTTCAAG+CGG | + | 6900:8041-8060 | None:intergenic | 50.0% | |
| GAGGAATAGAAAGGGAGGAC+CGG | - | 6900:7132-7151 | MS.gene98380:CDS | 50.0% | |
| GCAAGGGATCACCTAACGAA+TGG | - | 6900:7644-7663 | MS.gene98380:intron | 50.0% | |
| GCGGCAAAGCTGAATAGGAA+AGG | - | 6900:8068-8087 | MS.gene98380:intron | 50.0% | |
| GGAGAATGACCCTTATGGCA+TGG | + | 6900:7768-7787 | None:intergenic | 50.0% | |
| GGTCCTCCCTTTCTATTCCT+CGG | + | 6900:7133-7152 | None:intergenic | 50.0% | |
| GGTTGCCCTGGTTTATATCC+CGG | + | 6900:7858-7877 | None:intergenic | 50.0% | |
| GTGCTCGTACGGTTCAAAGA+AGG | - | 6900:7216-7235 | MS.gene98380:CDS | 50.0% | |
| TAACGAATGGACGAGCTCCA+AGG | - | 6900:7657-7676 | MS.gene98380:intron | 50.0% | |
| TCACCAACCTTAACGGCCTT+GGG | - | 6900:8435-8454 | MS.gene98380:CDS | 50.0% | |
| TGCAATGAGTAGTTCGCTCC+AGG | - | 6900:8470-8489 | MS.gene98380:CDS | 50.0% | |
| TGTTTGCTCGTCGTTTAGGC+CGG | + | 6900:7611-7630 | None:intergenic | 50.0% | |
| TTACAGAGGACGTGCTCGTA+CGG | - | 6900:7205-7224 | MS.gene98380:CDS | 50.0% | |
| TTCCTATGATAGTCCCGCTG+CGG | + | 6900:8214-8233 | None:intergenic | 50.0% | |
| TTGGAGCTCGTCCATTCGTT+AGG | + | 6900:7658-7677 | None:intergenic | 50.0% | |
| ! | CGGGCGGATTTATCTGATCA+AGG | - | 6900:7507-7526 | MS.gene98380:intron | 50.0% |
| ! | GTTGGCTTCCAGCTCAATCT+CGG | + | 6900:8525-8544 | None:intergenic | 50.0% |
| !!! | GAGGAGCATTGTTTTGAGGG+AGG | + | 6900:8417-8436 | None:intergenic | 50.0% |
| !!! | GTTTTTGGTTTAAGGGCGGG+CGG | - | 6900:7491-7510 | MS.gene98380:intron | 50.0% |
| ATAAAGGCGGGCCGCTTGAA+CGG | - | 6900:8027-8046 | MS.gene98380:intron | 55.0% | |
| ATGTTCCCCTAACCCAACCC+GGG | - | 6900:7406-7425 | MS.gene98380:intron | 55.0% | |
| CAACCCAAGGCCGTTAAGGT+TGG | + | 6900:8441-8460 | None:intergenic | 55.0% | |
| CAACCTTAACGGCCTTGGGT+TGG | - | 6900:8439-8458 | MS.gene98380:CDS | 55.0% | |
| CAAGGAGGGAGGAAAGAGGA+AGG | - | 6900:7675-7694 | MS.gene98380:intron | 55.0% | |
| CAAGGGTCCTGGTACTATCC+AGG | - | 6900:7539-7558 | MS.gene98380:intron | 55.0% | |
| CTCACCAACCTTAACGGCCT+TGG | - | 6900:8434-8453 | MS.gene98380:CDS | 55.0% | |
| CTGCTCATTGCAGTCACCTC+CGG | + | 6900:7576-7595 | None:intergenic | 55.0% | |
| CTTCCTCTTTCCTCCCTCCT+TGG | + | 6900:7677-7696 | None:intergenic | 55.0% | |
| CTTCGCACCTGGATAGTACC+AGG | + | 6900:7549-7568 | None:intergenic | 55.0% | |
| GAATAGAAAGGGAGGACCGG+GGG | - | 6900:7135-7154 | MS.gene98380:CDS | 55.0% | |
| GAATGGACGAGCTCCAAGGA+GGG | - | 6900:7661-7680 | MS.gene98380:intron | 55.0% | |
| GAGGAAAGGGCTGTAGGTGA+TGG | - | 6900:7932-7951 | MS.gene98380:intron | 55.0% | |
| GATGTTCCCCTAACCCAACC+CGG | - | 6900:7405-7424 | MS.gene98380:intron | 55.0% | |
| GGAATAGAAAGGGAGGACCG+GGG | - | 6900:7134-7153 | MS.gene98380:CDS | 55.0% | |
| GGGTCATTCTCCAAACGGGA+CGG | - | 6900:7776-7795 | MS.gene98380:intron | 55.0% | |
| GGTCATTCTCCAAACGGGAC+GGG | - | 6900:7777-7796 | MS.gene98380:intron | 55.0% | |
| GTCATTCTCCAAACGGGACG+GGG | - | 6900:7778-7797 | MS.gene98380:intron | 55.0% | |
| GTGGTTGACAAGCCACTTCG+AGG | + | 6900:8388-8407 | None:intergenic | 55.0% | |
| TACCCCAACCCAACTAGCTC+TGG | + | 6900:7161-7180 | None:intergenic | 55.0% | |
| TATAGAGCCGTAAGCGCGGT+GGG | - | 6900:7179-7198 | MS.gene98380:CDS | 55.0% | |
| TATCCAGGTGCGAAGAACCC+CGG | - | 6900:7554-7573 | MS.gene98380:intron | 55.0% | |
| TCTATGTTAGCTAGCGGGGG+CGG | + | 6900:8240-8259 | None:intergenic | 55.0% | |
| TGAGCCATTCCCATCCCAAG+TGG | + | 6900:8326-8345 | None:intergenic | 55.0% | |
| TGCTCATTGCAGTCACCTCC+GGG | + | 6900:7575-7594 | None:intergenic | 55.0% | |
| TTGGGTGACAGATCGGCCAT+AGG | - | 6900:7826-7845 | MS.gene98380:intron | 55.0% | |
| ! | ACCTTAACGGCCTTGGGTTG+GGG | - | 6900:8441-8460 | MS.gene98380:CDS | 55.0% |
| ! | ATGCTCGACATTGGTTGCCC+TGG | + | 6900:7870-7889 | None:intergenic | 55.0% |
| ! | CCGCCACTTCTCTGAAAGCA+TGG | + | 6900:7707-7726 | None:intergenic | 55.0% |
| ! | TGCCGCCCGTTTTCATTTCG+TGG | - | 6900:7897-7916 | MS.gene98380:intron | 55.0% |
| !! | ATCGGCCATAGGAGTACTCC+GGG | - | 6900:7837-7856 | MS.gene98380:intron | 55.0% |
| !! | CAAGGCCGTTAAGGTTGGTG+AGG | + | 6900:8436-8455 | None:intergenic | 55.0% |
| !! | GATCGGCCATAGGAGTACTC+CGG | - | 6900:7836-7855 | MS.gene98380:intron | 55.0% |
| !!! | GTTTTGAGGGAGGGAAAGCG+TGG | + | 6900:8407-8426 | None:intergenic | 55.0% |
| AATCGGGCCACCACTTGGGA+TGG | - | 6900:8313-8332 | MS.gene98380:intron | 60.0% | |
| AGCCACTTCGAGGAAGCGAC+TGG | + | 6900:8378-8397 | None:intergenic | 60.0% | |
| ATAGAGCCGTAAGCGCGGTG+GGG | - | 6900:7180-7199 | MS.gene98380:CDS | 60.0% | |
| ATCGGGCCACCACTTGGGAT+GGG | - | 6900:8314-8333 | MS.gene98380:intron | 60.0% | |
| ATGAGCCTTGCGACGAGACG+CGG | + | 6900:7466-7485 | None:intergenic | 60.0% | |
| ATTCCTCGGTAAGCGGACCG+TGG | + | 6900:7119-7138 | None:intergenic | 60.0% | |
| CATCCGAGCGATTGCCTTCG+CGG | + | 6900:7389-7408 | None:intergenic | 60.0% | |
| CCTACAGCCCTTTCCTCTGC+CGG | + | 6900:7929-7948 | None:intergenic | 60.0% | |
| CGAATGGACGAGCTCCAAGG+AGG | - | 6900:7660-7679 | MS.gene98380:intron | 60.0% | |
| CGGATCCAAACGCGCTCACA+AGG | + | 6900:7369-7388 | None:intergenic | 60.0% | |
| CGTTCCTATTGGGTCGTGCG+TGG | - | 6900:7988-8007 | MS.gene98380:intron | 60.0% | |
| CTACAGCCCTTTCCTCTGCC+GGG | + | 6900:7928-7947 | None:intergenic | 60.0% | |
| CTATGTTAGCTAGCGGGGGC+GGG | + | 6900:8239-8258 | None:intergenic | 60.0% | |
| CTCCAGTCGCTTCCTCGAAG+TGG | - | 6900:8373-8392 | MS.gene98380:intron | 60.0% | |
| CTCTTCCCGACAGGCCGAAT+CGG | - | 6900:8296-8315 | MS.gene98380:intron | 60.0% | |
| GAAGTCCCCGGCAGAGGAAA+GGG | - | 6900:7919-7938 | MS.gene98380:intron | 60.0% | |
| GATCCGCGAAGGCAATCGCT+CGG | - | 6900:7383-7402 | MS.gene98380:intron | 60.0% | |
| GCCACCACTTGGGATGGGAA+TGG | - | 6900:8319-8338 | MS.gene98380:intron | 60.0% | |
| GCCATTCCCATCCCAAGTGG+TGG | + | 6900:8323-8342 | None:intergenic | 60.0% | |
| GCTCATTGCAGTCACCTCCG+GGG | + | 6900:7574-7593 | None:intergenic | 60.0% | |
| GCTCCAAGGAGGGAGGAAAG+AGG | - | 6900:7671-7690 | MS.gene98380:intron | 60.0% | |
| GCTTCCAGCTCAATCTCGGC+CGG | + | 6900:8521-8540 | None:intergenic | 60.0% | |
| GGGCCAGAGCTAGTTGGGTT+GGG | - | 6900:7155-7174 | MS.gene98380:CDS | 60.0% | |
| GGGGTATAGAGCCGTAAGCG+CGG | - | 6900:7175-7194 | MS.gene98380:CDS | 60.0% | |
| GTATAGAGCCGTAAGCGCGG+TGG | - | 6900:7178-7197 | MS.gene98380:CDS | 60.0% | |
| TAAAGGCGGGCCGCTTGAAC+GGG | - | 6900:8028-8047 | MS.gene98380:intron | 60.0% | |
| TACAGCCCTTTCCTCTGCCG+GGG | + | 6900:7927-7946 | None:intergenic | 60.0% | |
| TCCCAAGTGGTGGCCCGATT+CGG | + | 6900:8313-8332 | None:intergenic | 60.0% | |
| TCTTCCCGACAGGCCGAATC+GGG | - | 6900:8297-8316 | MS.gene98380:intron | 60.0% | |
| TGCAGTCTTGCCCCAACCCA+AGG | + | 6900:8454-8473 | None:intergenic | 60.0% | |
| TTCCTCGGTAAGCGGACCGT+GGG | + | 6900:7118-7137 | None:intergenic | 60.0% | |
| ! | GGCCAGAGCTAGTTGGGTTG+GGG | - | 6900:7156-7175 | MS.gene98380:CDS | 60.0% |
| ! | TCCGTTCCCGGGTTGGGTTA+GGG | + | 6900:7415-7434 | None:intergenic | 60.0% |
| !! | GAGACGTAACGGACGGTCAG+AGG | - | 6900:8188-8207 | MS.gene98380:intron | 60.0% |
| AACCCAACCCGGGAACGGAC+CGG | - | 6900:7416-7435 | MS.gene98380:intron | 65.0% | |
| ACCGGAGGGAACCGCAGCAT+GGG | - | 6900:7434-7453 | MS.gene98380:intron | 65.0% | |
| ACCGGGGGCCAGAGCTAGTT+GGG | - | 6900:7150-7169 | MS.gene98380:CDS | 65.0% | |
| AGGCTTGACCCCGTCCCGTT+TGG | + | 6900:7789-7808 | None:intergenic | 65.0% | |
| ATCCAGCTCTCGAGGGGGTG+GGG | + | 6900:8497-8516 | None:intergenic | 65.0% | |
| ATTGGGTCGTGCGTGGCAGC+TGG | - | 6900:7995-8014 | MS.gene98380:intron | 65.0% | |
| CATCCAGCTCTCGAGGGGGT+GGG | + | 6900:8498-8517 | None:intergenic | 65.0% | |
| CCCCTAACCCAACCCGGGAA+CGG | - | 6900:7411-7430 | MS.gene98380:intron | 65.0% | |
| CCGGCAGAGGAAAGGGCTGT+AGG | - | 6900:7926-7945 | MS.gene98380:intron | 65.0% | |
| GAGCGCGTTTGGATCCGCGA+AGG | - | 6900:7372-7391 | MS.gene98380:intron | 65.0% | |
| GATCAAGGGCCGGGGCACAA+GGG | - | 6900:7522-7541 | MS.gene98380:intron | 65.0% | |
| GATGCCGGCCGAGATTGAGC+TGG | - | 6900:8514-8533 | MS.gene98380:CDS | 65.0% | |
| GATGTCCGCGTCTCGTCGCA+AGG | - | 6900:7458-7477 | MS.gene98380:intron | 65.0% | |
| GCCCCAACCCAAGGCCGTTA+AGG | + | 6900:8445-8464 | None:intergenic | 65.0% | |
| GCCGAATCGGGCCACCACTT+GGG | - | 6900:8309-8328 | MS.gene98380:intron | 65.0% | |
| GCTGCCACGCACGACCCAAT+AGG | + | 6900:7995-8014 | None:intergenic | 65.0% | |
| GGAAGTCCCCGGCAGAGGAA+AGG | - | 6900:7918-7937 | MS.gene98380:intron | 65.0% | |
| GGCCGCAGCGGGACTATCAT+AGG | - | 6900:8209-8228 | MS.gene98380:intron | 65.0% | |
| GGGGCCAGAGCTAGTTGGGT+TGG | - | 6900:7154-7173 | MS.gene98380:CDS | 65.0% | |
| GTAACCCCCCACCGCGCTTA+CGG | + | 6900:7189-7208 | None:intergenic | 65.0% | |
| GTACCAGGACCCTTGTGCCC+CGG | + | 6900:7534-7553 | None:intergenic | 65.0% | |
| GTGCGCCTTGTGAGCGCGTT+TGG | - | 6900:7361-7380 | MS.gene98380:intron | 65.0% | |
| TAGAGCCGTAAGCGCGGTGG+GGG | - | 6900:7181-7200 | MS.gene98380:CDS | 65.0% | |
| TGATCAAGGGCCGGGGCACA+AGG | - | 6900:7521-7540 | MS.gene98380:intron | 65.0% | |
| TGGACGAGCTCCAAGGAGGG+AGG | - | 6900:7664-7683 | MS.gene98380:intron | 65.0% | |
| TTCGTGGAAGTCCCCGGCAG+AGG | - | 6900:7913-7932 | MS.gene98380:intron | 65.0% | |
| ! | AAGCGGACCGTGGGAGCATG+AGG | + | 6900:7109-7128 | None:intergenic | 65.0% |
| ! | AGCGGACCGTGGGAGCATGA+GGG | + | 6900:7108-7127 | None:intergenic | 65.0% |
| ! | CCGTTCCCGGGTTGGGTTAG+GGG | + | 6900:7414-7433 | None:intergenic | 65.0% |
| ! | GTCCGTTCCCGGGTTGGGTT+AGG | + | 6900:7416-7435 | None:intergenic | 65.0% |
| !! | ACCCAACTAGCTCTGGCCCC+CGG | + | 6900:7154-7173 | None:intergenic | 65.0% |
| AGAGCCGTAAGCGCGGTGGG+GGG | - | 6900:7182-7201 | MS.gene98380:CDS | 70.0% | |
| AGCGCGGTGGGGGGTTACAG+AGG | - | 6900:7191-7210 | MS.gene98380:CDS | 70.0% | |
| CAACCCGGGAACGGACCGGA+GGG | - | 6900:7420-7439 | MS.gene98380:intron | 70.0% | |
| CCAGGTGCGAAGAACCCCGG+AGG | - | 6900:7557-7576 | MS.gene98380:intron | 70.0% | |
| CCCCATGCTGCGGTTCCCTC+CGG | + | 6900:7438-7457 | None:intergenic | 70.0% | |
| CCCCCTCGAGAGCTGGATGC+CGG | - | 6900:8499-8518 | MS.gene98380:CDS | 70.0% | |
| CCGGAGGGAACCGCAGCATG+GGG | - | 6900:7435-7454 | MS.gene98380:intron | 70.0% | |
| CCGGCATCCAGCTCTCGAGG+GGG | + | 6900:8502-8521 | None:intergenic | 70.0% | |
| CCTCCGGGGTTCTTCGCACC+TGG | + | 6900:7560-7579 | None:intergenic | 70.0% | |
| CGCGGACATCCCCCATGCTG+CGG | + | 6900:7448-7467 | None:intergenic | 70.0% | |
| CGGAGGGAACCGCAGCATGG+GGG | - | 6900:7436-7455 | MS.gene98380:intron | 70.0% | |
| CTCCCACGGTCCGCTTACCG+AGG | - | 6900:7113-7132 | MS.gene98380:CDS | 70.0% | |
| CTCCGGTCCGTTCCCGGGTT+GGG | + | 6900:7421-7440 | None:intergenic | 70.0% | |
| GACCGGAGGGAACCGCAGCA+TGG | - | 6900:7433-7452 | MS.gene98380:intron | 70.0% | |
| GACCGGGGGCCAGAGCTAGT+TGG | - | 6900:7149-7168 | MS.gene98380:CDS | 70.0% | |
| GCATCCAGCTCTCGAGGGGG+TGG | + | 6900:8499-8518 | None:intergenic | 70.0% | |
| GCCGGCATCCAGCTCTCGAG+GGG | + | 6900:8503-8522 | None:intergenic | 70.0% | |
| GGCCGAATCGGGCCACCACT+TGG | - | 6900:8308-8327 | MS.gene98380:intron | 70.0% | |
| GGCCGGCATCCAGCTCTCGA+GGG | + | 6900:8504-8523 | None:intergenic | 70.0% | |
| GGTTCCCTCCGGTCCGTTCC+CGG | + | 6900:7427-7446 | None:intergenic | 70.0% | |
| GTTCCCTCCGGTCCGTTCCC+GGG | + | 6900:7426-7445 | None:intergenic | 70.0% | |
| ! | CGGACCGTGGGAGCATGAGG+GGG | + | 6900:7106-7125 | None:intergenic | 70.0% |
| ! | GACCGTGGGAGCATGAGGGG+GGG | + | 6900:7104-7123 | None:intergenic | 70.0% |
| ! | GCGGACCGTGGGAGCATGAG+GGG | + | 6900:7107-7126 | None:intergenic | 70.0% |
| ! | GGACCGTGGGAGCATGAGGG+GGG | + | 6900:7105-7124 | None:intergenic | 70.0% |
| !! | GGTGGCCCGATTCGGCCTGT+CGG | + | 6900:8305-8324 | None:intergenic | 70.0% |
| !! | GTGGCCCGATTCGGCCTGTC+GGG | + | 6900:8304-8323 | None:intergenic | 70.0% |
| CCAACCCGGGAACGGACCGG+AGG | - | 6900:7419-7438 | MS.gene98380:intron | 75.0% | |
| CCTCCGGTCCGTTCCCGGGT+TGG | + | 6900:7422-7441 | None:intergenic | 75.0% | |
| CGCCCCCCCTCATGCTCCCA+CGG | - | 6900:7099-7118 | MS.gene98380:CDS | 75.0% | |
| CGGACGGTCAGAGGCCGCAG+CGG | - | 6900:8197-8216 | MS.gene98380:intron | 75.0% | |
| CGGCCGGCATCCAGCTCTCG+AGG | + | 6900:8505-8524 | None:intergenic | 75.0% | |
| CTCTCGAGGGGGTGGGGTCC+TGG | + | 6900:8491-8510 | None:intergenic | 75.0% | |
| GACCCCACCCCCTCGAGAGC+TGG | - | 6900:8492-8511 | MS.gene98380:CDS | 75.0% | |
| GGACGGTCAGAGGCCGCAGC+GGG | - | 6900:8198-8217 | MS.gene98380:intron | 75.0% | |
| ! | CGTGGGAGCATGAGGGGGGG+CGG | + | 6900:7101-7120 | None:intergenic | 75.0% |
| ! | GGGCCGGGGCACAAGGGTCC+TGG | - | 6900:7528-7547 | MS.gene98380:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 6900 | gene | 7071 | 8548 | 7071 | ID=MS.gene98380 |
| 6900 | mRNA | 7071 | 8548 | 7071 | ID=MS.gene98380.t1;Parent=MS.gene98380 |
| 6900 | exon | 8381 | 8548 | 8381 | ID=MS.gene98380.t1.exon1;Parent=MS.gene98380.t1 |
| 6900 | CDS | 8381 | 8548 | 8381 | ID=cds.MS.gene98380.t1;Parent=MS.gene98380.t1 |
| 6900 | exon | 7071 | 7310 | 7071 | ID=MS.gene98380.t1.exon2;Parent=MS.gene98380.t1 |
| 6900 | CDS | 7071 | 7310 | 7071 | ID=cds.MS.gene98380.t1;Parent=MS.gene98380.t1 |
| Gene Sequence |
| Protein sequence |
