AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055841


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055841.t1 MTR_2g090190 96.391 471 16 1 1 471 1 470 0.0 936
MS.gene055841.t1 MTR_4g037470 81.132 477 77 4 1 471 1 470 0.0 773
MS.gene055841.t1 MTR_4g037470 79.630 486 77 5 1 471 1 479 0.0 765
MS.gene055841.t1 MTR_7g080170 51.126 444 192 5 45 468 50 488 2.08e-149 436
MS.gene055841.t1 MTR_7g021530 49.282 418 194 7 1 407 1 411 6.23e-135 395
MS.gene055841.t1 MTR_7g021530 49.282 418 194 7 1 407 42 452 2.85e-134 395
MS.gene055841.t1 MTR_7g070510 44.794 413 188 8 56 465 57 432 3.47e-119 356
MS.gene055841.t1 MTR_7g021530 52.199 341 152 5 76 407 23 361 6.42e-119 352
MS.gene055841.t1 MTR_7g080170 48.571 385 174 4 103 468 1 380 1.10e-116 348
MS.gene055841.t1 MTR_8g017240 52.336 321 131 5 45 364 40 339 1.47e-112 337
MS.gene055841.t1 MTR_7g021530 48.160 326 153 5 1 316 1 320 5.06e-105 315
MS.gene055841.t1 MTR_4g120410 48.515 303 142 4 63 364 63 352 1.09e-104 316
MS.gene055841.t1 MTR_1g083690 46.945 311 151 3 55 364 53 350 1.68e-104 315
MS.gene055841.t1 MTR_7g021530 48.160 326 153 5 1 316 42 361 2.06e-104 315
MS.gene055841.t1 MTR_7g112490 46.273 322 162 4 55 372 55 369 4.94e-104 315
MS.gene055841.t1 MTR_7g112490 46.273 322 162 4 55 372 73 387 1.25e-103 315
MS.gene055841.t1 MTR_2g435550 48.525 305 143 6 61 364 48 339 2.72e-103 312
MS.gene055841.t1 MTR_2g435550 48.525 305 143 6 61 364 62 353 4.14e-103 312
MS.gene055841.t1 MTR_4g013295 47.319 317 155 4 51 365 38 344 5.56e-102 309
MS.gene055841.t1 MTR_2g435550 47.078 308 144 7 61 362 62 356 2.20e-98 301
MS.gene055841.t1 MTR_1g016620 47.923 313 149 3 55 367 33 331 3.46e-91 281
MS.gene055841.t1 MTR_7g021530 49.490 196 90 3 48 235 45 239 2.46e-63 206
MS.gene055841.t1 MTR_7g021530 49.490 196 90 3 48 235 86 280 6.75e-63 206
MS.gene055841.t1 MTR_6g087000 30.063 316 161 11 73 366 106 383 1.29e-27 117
MS.gene055841.t1 MTR_4g118340 27.796 313 169 9 73 366 68 342 1.83e-27 114
MS.gene055841.t1 MTR_6g087000 30.063 316 161 11 73 366 106 383 2.54e-27 116
MS.gene055841.t1 MTR_5g009370 32.313 294 141 9 44 326 34 280 2.48e-26 109
MS.gene055841.t1 MTR_2g020970 28.037 321 174 10 73 374 69 351 6.47e-24 104
MS.gene055841.t1 MTR_2g020970 28.115 313 168 10 73 366 69 343 8.80e-24 102
MS.gene055841.t1 MTR_3g104710 28.477 302 160 11 25 323 236 484 1.35e-20 95.1
MS.gene055841.t1 MTR_3g068200 31.365 271 123 11 68 324 100 321 1.73e-20 93.6
MS.gene055841.t1 MTR_3g105730 32.407 216 119 7 161 373 78 269 3.78e-20 90.5
MS.gene055841.t1 MTR_3g105730 32.407 216 119 7 161 373 100 291 4.03e-20 90.9
MS.gene055841.t1 MTR_6g081850 30.769 221 114 7 161 363 119 318 6.32e-20 90.9
MS.gene055841.t1 MTR_8g102550 30.078 256 154 6 68 323 110 340 1.07e-19 91.3
MS.gene055841.t1 MTR_5g080680 31.923 260 134 9 68 324 109 328 1.08e-19 91.3
MS.gene055841.t1 MTR_1g014640 34.615 182 101 5 161 341 143 307 2.34e-19 89.4
MS.gene055841.t1 MTR_1g013400 34.615 182 101 5 161 341 143 307 2.34e-19 89.4
MS.gene055841.t1 MTR_1g115570 30.435 253 118 8 90 341 126 321 1.82e-18 87.0
MS.gene055841.t1 MTR_4g125810 28.814 236 127 7 88 323 251 445 2.01e-18 88.2
MS.gene055841.t1 MTR_2g008850 34.066 182 102 7 163 343 56 220 1.48e-17 82.4
MS.gene055841.t1 MTR_2g040500 28.916 249 152 6 76 319 248 476 2.41e-17 85.1
MS.gene055841.t1 MTR_2g008850 34.066 182 102 7 163 343 102 266 4.18e-17 82.0
MS.gene055841.t1 MTR_4g094208 32.086 187 106 8 159 341 91 260 1.57e-16 80.1
MS.gene055841.t1 MTR_2g078760 36.667 180 88 8 187 364 98 253 2.10e-16 79.3
MS.gene055841.t1 MTR_0015s0140 26.646 319 177 14 87 377 76 365 2.35e-16 81.3
MS.gene055841.t1 MTR_3g105880 29.720 286 149 12 65 324 28 287 2.46e-16 80.9
MS.gene055841.t1 MTR_3g074610 34.483 203 101 10 166 363 106 281 3.91e-16 79.0
MS.gene055841.t1 MTR_8g463130 34.759 187 101 8 159 341 68 237 4.03e-16 78.6
MS.gene055841.t1 MTR_2g078760 36.667 180 88 8 187 364 177 332 4.09e-16 79.7
MS.gene055841.t1 MTR_8g463130 34.759 187 101 8 159 341 96 265 5.43e-16 78.6
MS.gene055841.t1 MTR_1g015110 26.452 310 167 11 17 323 237 488 6.15e-16 80.5
MS.gene055841.t1 MTR_5g063940 35.437 206 109 11 147 346 37 224 6.66e-16 77.4
MS.gene055841.t1 MTR_3g105880 29.720 286 149 12 65 324 28 287 8.84e-16 78.6
MS.gene055841.t1 MTR_5g063940 35.437 206 109 11 147 346 84 271 1.03e-15 77.8
MS.gene055841.t1 MTR_1g086350 29.278 263 132 11 90 343 102 319 1.16e-15 79.0
MS.gene055841.t1 MTR_1g086350 29.545 264 130 12 90 343 118 335 1.27e-15 79.0
MS.gene055841.t1 MTR_1g028300 33.333 165 92 4 160 324 184 330 3.86e-15 77.4
MS.gene055841.t1 MTR_7g090530 28.223 287 145 11 82 342 61 312 8.21e-15 76.6
MS.gene055841.t1 MTR_1g014190 28.470 281 159 10 65 324 28 287 8.65e-15 75.9
MS.gene055841.t1 MTR_4g094542 34.615 182 98 7 162 341 186 348 1.11e-14 75.9
MS.gene055841.t1 MTR_7g081020 26.959 319 167 15 90 375 76 361 1.16e-14 75.9
MS.gene055841.t1 MTR_1g014190 28.470 281 159 10 65 324 66 325 1.29e-14 75.9
MS.gene055841.t1 MTR_1g086350 28.077 260 133 10 93 343 19 233 1.48e-14 74.3
MS.gene055841.t1 MTR_3g091060 32.222 180 104 4 163 341 162 324 2.40e-14 74.7
MS.gene055841.t1 MTR_8g074930 27.586 261 140 10 155 373 109 362 3.42e-14 74.3
MS.gene055841.t1 MTR_1g050520 26.667 300 167 12 68 364 395 644 4.89e-14 75.1
MS.gene055841.t1 MTR_8g074930 27.237 257 138 10 159 373 1 250 4.90e-14 72.8
MS.gene055841.t1 MTR_0015s0140 28.372 215 125 8 191 377 98 311 5.90e-14 73.2
MS.gene055841.t1 MTR_5g024340 28.926 242 108 11 90 324 124 308 8.43e-14 73.2
MS.gene055841.t1 MTR_4g123080 26.791 321 159 13 64 362 60 326 1.24e-13 72.4
MS.gene055841.t1 MTR_4g123080 26.791 321 159 13 64 362 78 344 1.84e-13 72.0
MS.gene055841.t1 MTR_7g090550 27.134 328 161 13 82 367 62 353 1.45e-12 69.7
MS.gene055841.t1 MTR_2g033000 25.874 286 145 11 90 362 100 331 1.49e-12 69.3
MS.gene055841.t1 MTR_7g060770 24.478 335 193 14 67 368 243 550 1.85e-12 69.7
MS.gene055841.t1 MTR_1g116260 25.237 317 165 12 85 365 75 355 4.54e-12 67.8
MS.gene055841.t1 MTR_1g106855 25.071 351 195 14 83 398 54 371 1.15e-11 66.6
MS.gene055841.t1 MTR_2g078760 40.310 129 60 7 187 314 177 289 6.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055841.t1 AT4G03415 74.165 449 104 5 21 468 28 465 0.0 636
MS.gene055841.t1 AT4G03415 74.165 449 104 5 21 468 28 465 0.0 636
MS.gene055841.t1 AT4G03415 74.165 449 104 5 21 468 28 465 0.0 636
MS.gene055841.t1 AT1G03590 67.161 472 144 3 1 471 1 462 0.0 630
MS.gene055841.t1 AT1G16220 49.663 445 189 9 42 464 46 477 4.83e-147 429
MS.gene055841.t1 AT3G02750 48.178 494 220 7 1 464 1 488 5.33e-147 429
MS.gene055841.t1 AT3G02750 48.178 494 220 7 1 464 1 488 5.33e-147 429
MS.gene055841.t1 AT1G79630 49.095 442 188 8 51 464 58 490 4.12e-145 425
MS.gene055841.t1 AT1G79630 49.095 442 188 8 51 464 54 486 5.34e-145 424
MS.gene055841.t1 AT5G36250 47.936 436 167 7 45 464 52 443 5.94e-139 407
MS.gene055841.t1 AT3G02750 44.991 529 220 8 1 464 1 523 1.06e-138 409
MS.gene055841.t1 AT5G36250 46.444 450 167 8 45 464 52 457 8.38e-135 397
MS.gene055841.t1 AT1G79630 48.301 412 176 8 81 464 18 420 1.12e-129 383
MS.gene055841.t1 AT1G79630 48.301 412 176 8 81 464 18 420 1.12e-129 383
MS.gene055841.t1 AT1G79630 47.044 389 170 7 103 464 1 380 2.54e-115 345
MS.gene055841.t1 AT1G79630 47.044 389 170 7 103 464 1 380 2.54e-115 345
MS.gene055841.t1 AT1G79630 47.044 389 170 7 103 464 1 380 2.54e-115 345
MS.gene055841.t1 AT1G79630 47.044 389 170 7 103 464 1 380 2.54e-115 345
MS.gene055841.t1 AT5G01700 50.314 318 140 4 52 367 39 340 8.20e-105 317
MS.gene055841.t1 AT5G36250 52.297 283 122 3 45 314 52 334 1.56e-104 315
MS.gene055841.t1 AT3G05640 46.497 314 149 3 52 364 54 349 2.16e-104 315
MS.gene055841.t1 AT3G05640 46.497 314 149 3 52 364 54 349 2.16e-104 315
MS.gene055841.t1 AT3G05640 46.497 314 149 3 52 364 54 349 2.16e-104 315
MS.gene055841.t1 AT5G01700 51.974 304 128 4 66 367 4 291 3.87e-104 314
MS.gene055841.t1 AT5G27930 48.065 310 148 4 55 363 56 353 5.24e-104 315
MS.gene055841.t1 AT5G27930 48.065 310 148 4 55 363 56 353 5.24e-104 315
MS.gene055841.t1 AT3G16800 42.492 313 158 3 54 364 56 348 1.18e-85 267
MS.gene055841.t1 AT3G16800 42.492 313 158 3 54 364 56 348 1.18e-85 267
MS.gene055841.t1 AT3G16800 42.492 313 158 3 54 364 56 348 1.18e-85 267
MS.gene055841.t1 AT5G27930 45.914 257 126 4 56 311 57 301 1.17e-81 256
MS.gene055841.t1 AT4G32950 41.444 374 165 9 1 371 1 323 1.40e-80 253
MS.gene055841.t1 AT5G26010 43.548 310 150 4 59 367 42 327 3.65e-79 249
MS.gene055841.t1 AT3G16800 41.758 273 138 2 93 364 1 253 6.14e-73 231
MS.gene055841.t1 AT3G16800 41.758 273 138 2 93 364 1 253 6.14e-73 231
MS.gene055841.t1 AT4G32950 40.446 314 133 9 1 311 1 263 2.42e-59 196
MS.gene055841.t1 AT3G16800 35.870 184 96 3 54 235 56 219 5.78e-33 125
MS.gene055841.t1 AT2G20050 29.819 332 170 10 73 384 125 413 1.49e-30 126
MS.gene055841.t1 AT2G20050 29.819 332 170 10 73 384 125 413 1.80e-30 125
MS.gene055841.t1 AT3G11410 33.818 275 108 12 68 318 112 336 3.62e-23 101
MS.gene055841.t1 AT5G59220 32.584 267 127 10 68 324 119 342 1.07e-22 100
MS.gene055841.t1 AT3G06270 27.365 296 153 10 73 347 70 324 2.70e-22 98.2
MS.gene055841.t1 AT1G07430 30.744 309 166 11 34 332 92 362 6.72e-22 98.2
MS.gene055841.t1 AT5G10740 36.022 186 97 5 161 343 99 265 5.68e-21 94.4
MS.gene055841.t1 AT5G10740 36.022 186 97 5 161 343 99 265 5.68e-21 94.4
MS.gene055841.t1 AT4G28400 38.333 180 93 8 163 341 82 244 8.14e-21 92.4
MS.gene055841.t1 AT4G28400 38.333 180 93 8 163 341 104 266 1.22e-20 92.4
MS.gene055841.t1 AT5G24940 35.326 184 101 5 161 343 99 265 1.40e-20 94.4
MS.gene055841.t1 AT4G31750 33.495 206 110 7 163 365 101 282 1.09e-19 90.1
MS.gene055841.t1 AT4G31750 33.333 204 113 6 163 365 101 282 1.12e-19 90.1
MS.gene055841.t1 AT4G31750 33.333 204 113 6 163 365 101 282 1.12e-19 90.1
MS.gene055841.t1 AT1G72770 34.016 244 116 9 90 323 238 446 7.83e-19 89.4
MS.gene055841.t1 AT1G72770 34.016 244 116 9 90 323 238 446 7.83e-19 89.4
MS.gene055841.t1 AT1G72770 34.016 244 116 9 90 323 238 446 7.83e-19 89.4
MS.gene055841.t1 AT5G57050 32.203 236 118 8 88 323 158 351 9.36e-19 88.6
MS.gene055841.t1 AT5G57050 32.203 236 118 8 88 323 118 311 1.33e-18 87.8
MS.gene055841.t1 AT4G26080 32.203 236 116 8 88 323 170 361 3.12e-18 87.4
MS.gene055841.t1 AT2G29380 30.797 276 120 13 68 323 85 309 4.73e-18 85.9
MS.gene055841.t1 AT2G34740 36.019 211 106 11 159 364 149 335 5.52e-18 85.5
MS.gene055841.t1 AT1G78200 34.783 184 105 5 161 343 54 223 9.38e-18 82.8
MS.gene055841.t1 AT1G78200 34.783 184 105 5 161 343 54 223 9.38e-18 82.8
MS.gene055841.t1 AT1G78200 33.824 204 114 6 161 363 99 282 1.13e-17 83.6
MS.gene055841.t1 AT1G78200 33.824 204 114 6 161 363 99 282 1.13e-17 83.6
MS.gene055841.t1 AT1G78200 33.824 204 114 6 161 363 99 282 1.13e-17 83.6
MS.gene055841.t1 AT1G43900 33.854 192 108 5 149 339 177 350 2.47e-17 84.0
MS.gene055841.t1 AT1G17550 30.204 245 117 8 90 319 237 442 2.00e-16 82.0
MS.gene055841.t1 AT1G17550 30.204 245 117 8 90 319 237 442 2.00e-16 82.0
MS.gene055841.t1 AT2G20630 35.165 182 100 8 161 341 98 262 2.23e-16 79.7
MS.gene055841.t1 AT5G53140 30.769 195 117 4 148 341 154 331 3.46e-16 80.9
MS.gene055841.t1 AT5G53140 30.769 195 117 4 148 341 154 331 3.46e-16 80.9
MS.gene055841.t1 AT2G20630 35.165 182 100 8 161 341 98 262 3.89e-16 79.3
MS.gene055841.t1 AT1G34750 32.432 185 105 8 161 343 101 267 6.55e-16 78.6
MS.gene055841.t1 AT1G34750 32.432 185 105 8 161 343 101 267 6.55e-16 78.6
MS.gene055841.t1 AT1G34750 32.432 185 105 8 161 343 101 267 6.55e-16 78.6
MS.gene055841.t1 AT5G51760 34.392 189 88 6 151 323 153 321 9.01e-16 79.3
MS.gene055841.t1 AT5G51760 34.392 189 88 6 151 323 183 351 1.09e-15 79.3
MS.gene055841.t1 AT4G31860 27.946 297 170 10 65 339 28 302 1.48e-15 78.6
MS.gene055841.t1 AT4G31860 28.723 282 157 10 65 324 28 287 4.01e-15 76.3
MS.gene055841.t1 AT3G15260 34.574 188 102 8 158 341 102 272 4.49e-15 76.3
MS.gene055841.t1 AT3G15260 34.574 188 102 8 158 341 102 272 4.49e-15 76.3
MS.gene055841.t1 AT3G62260 30.682 264 124 10 90 341 27 243 1.18e-14 74.7
MS.gene055841.t1 AT1G18030 27.602 221 121 7 161 363 149 348 1.50e-14 75.5
MS.gene055841.t1 AT3G51470 25.862 290 141 11 64 336 32 264 3.57e-14 73.9
MS.gene055841.t1 AT3G51470 25.862 290 141 11 64 336 76 308 3.74e-14 74.3
MS.gene055841.t1 AT3G62260 30.682 264 124 10 90 341 117 333 3.78e-14 74.3
MS.gene055841.t1 AT2G33700 29.000 300 132 13 66 343 90 330 3.79e-14 74.3
MS.gene055841.t1 AT1G22280 32.195 205 113 8 161 363 106 286 3.92e-14 73.2
MS.gene055841.t1 AT3G62260 30.682 264 124 10 90 341 116 332 3.93e-14 74.3
MS.gene055841.t1 AT1G22280 32.195 205 113 8 161 363 100 280 4.43e-14 73.2
MS.gene055841.t1 AT4G28400 38.961 154 74 9 163 314 104 239 6.17e-14 72.0
MS.gene055841.t1 AT3G17250 26.335 281 154 10 90 362 158 393 6.87e-14 73.9
MS.gene055841.t1 AT1G07160 29.469 207 128 5 158 364 188 376 1.72e-13 72.4
MS.gene055841.t1 AT2G40860 31.414 191 108 6 162 344 461 636 2.28e-13 72.8
MS.gene055841.t1 AT5G06750 26.433 314 168 12 88 368 80 363 2.44e-13 72.0
MS.gene055841.t1 AT5G06750 26.433 314 168 12 88 368 80 363 2.44e-13 72.0
MS.gene055841.t1 AT2G40860 29.858 211 117 7 162 364 363 550 3.53e-13 72.0
MS.gene055841.t1 AT2G40860 29.858 211 117 7 162 364 461 648 4.73e-13 72.0
MS.gene055841.t1 AT3G12620 24.771 327 164 15 88 373 81 366 1.33e-12 69.7
MS.gene055841.t1 AT3G12620 24.771 327 164 15 88 373 81 366 1.33e-12 69.7
MS.gene055841.t1 AT1G18030 28.743 167 91 4 161 314 149 300 2.24e-12 68.2
MS.gene055841.t1 AT1G67820 29.237 236 113 8 90 324 115 297 2.47e-12 68.9
MS.gene055841.t1 AT4G31860 29.259 270 147 10 65 312 28 275 3.03e-12 67.4
MS.gene055841.t1 AT1G67820 35.366 164 85 6 162 324 190 333 4.22e-12 68.6
MS.gene055841.t1 AT1G68410 27.507 349 191 14 25 360 1 300 6.57e-12 67.8
MS.gene055841.t1 AT1G68410 27.507 349 191 14 25 360 1 300 6.57e-12 67.8
MS.gene055841.t1 AT1G68410 27.507 349 191 14 25 360 1 300 6.57e-12 67.8
MS.gene055841.t1 AT1G68410 27.507 349 191 14 25 360 1 300 6.57e-12 67.8
MS.gene055841.t1 AT5G06750 29.439 214 110 9 191 368 73 281 6.82e-12 67.0
MS.gene055841.t1 AT1G34750 32.727 165 89 9 161 323 101 245 8.02e-12 65.9
MS.gene055841.t1 AT1G48040 29.412 255 124 9 90 335 116 323 9.16e-12 67.0
MS.gene055841.t1 AT2G30020 27.376 263 137 10 63 323 142 352 2.79e-11 65.5
MS.gene055841.t1 AT2G40180 27.444 266 139 9 63 324 131 346 5.91e-11 64.7
MS.gene055841.t1 AT1G09160 26.667 270 173 10 127 390 75 325 9.45e-11 63.9
MS.gene055841.t1 AT1G09160 26.667 270 173 10 127 390 75 325 9.45e-11 63.9

Find 98 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGCTTTATGTCCTTCT+TGG 0.199638 2.1:-11082342 None:intergenic
GCTGAAGTCTCATGCAAATT+TGG 0.220869 2.1:+11082460 MS.gene055841:CDS
TAAATATCCAACTTCGAAAA+TGG 0.246853 2.1:+11083510 MS.gene055841:CDS
TGCCTGAATGCCTGTTGCTT+TGG 0.290415 2.1:-11083624 None:intergenic
AATTTGTTCATGGGTAATAT+TGG 0.292320 2.1:+11082773 MS.gene055841:CDS
ACCTAGTAGCACGCAAAGTT+AGG 0.335302 2.1:+11082243 MS.gene055841:CDS
TATGACACACTTGGCAAATC+AGG 0.348941 2.1:-11082872 None:intergenic
TGACCATCATCTGACTCAAC+TGG 0.351058 2.1:-11083649 None:intergenic
TTAGCAATGGCTAGAGCATT+TGG 0.381409 2.1:+11083083 MS.gene055841:CDS
ACTCCATCTTGTCTTGAAAT+CGG 0.382346 2.1:+11081865 MS.gene055841:CDS
TCAGGGTTCAAATTTGTTCA+TGG 0.382599 2.1:+11082763 MS.gene055841:intron
ATCAAGATGCCATGATTGTA+TGG 0.384111 2.1:+11082034 MS.gene055841:CDS
CCATTACTAAATATTCTGTT+TGG 0.386029 2.1:-11081961 None:intergenic
TTCTTGTATATTTACGCAGC+AGG 0.386376 2.1:+11081996 MS.gene055841:CDS
ACATGTGTAGGAGGAGGAAA+AGG 0.396810 2.1:+11083730 MS.gene055841:CDS
AACCACACCCTACAAACTTC+TGG 0.399419 2.1:-11083038 None:intergenic
CCCTAACTTTGCGTGCTACT+AGG 0.407833 2.1:-11082244 None:intergenic
CATCAAGTCATTGCTGTCCT+TGG 0.412532 2.1:-11082819 None:intergenic
CAAGGACAGCAATGACTTGA+TGG 0.418227 2.1:+11082820 MS.gene055841:CDS
TGAATGCCTGTTGCTTTGGA+TGG 0.421566 2.1:-11083620 None:intergenic
ATCATCGGCAGCGAGGGTTC+TGG 0.421788 2.1:+11083459 MS.gene055841:CDS
ATCCAAAGCAACAGGCATTC+AGG 0.423868 2.1:+11083622 MS.gene055841:CDS
AGAAGCCGGTGCGTAAATTC+AGG 0.424088 2.1:-11083143 None:intergenic
CAAAACTGGTTAGGTCTAGA+AGG 0.426937 2.1:+11083799 MS.gene055841:CDS
CATCAGCTGAAGATCAAAAC+TGG 0.432537 2.1:+11083785 MS.gene055841:CDS
AGGATGAACCAGAAGTTTGT+AGG 0.433167 2.1:+11083030 MS.gene055841:CDS
ACTAAATATTCTGTTTGGTA+AGG 0.434667 2.1:-11081956 None:intergenic
TTCATTGTTCTTGCCTCGGA+TGG 0.438125 2.1:+11083182 MS.gene055841:CDS
TGGTGATTCAAGAGCAATCA+TGG 0.443050 2.1:+11082793 MS.gene055841:CDS
GTGAAGTTCCTTCGCAAAGA+TGG 0.450703 2.1:-11083682 None:intergenic
GCTGAAGATCAAAACTGGTT+AGG 0.453850 2.1:+11083790 MS.gene055841:CDS
CCGCAACCATCCAAAGCAAC+AGG 0.458483 2.1:+11083614 MS.gene055841:CDS
TGAGAATAATTTCTCTGCTC+AGG 0.468225 2.1:+11082376 MS.gene055841:CDS
CAGGGTTCAAATTTGTTCAT+GGG 0.472932 2.1:+11082764 MS.gene055841:intron
AGACTTCAGCTCTTTGTCCA+TGG 0.483435 2.1:-11082447 None:intergenic
CCAAACAGAATATTTAGTAA+TGG 0.485067 2.1:+11081961 MS.gene055841:CDS
AACCAGAAGTTTGTAGGGTG+TGG 0.487786 2.1:+11083036 MS.gene055841:CDS
ATTTACGCAGCAGGGTCGTA+AGG 0.489572 2.1:+11082005 MS.gene055841:CDS
GGCCGTTCTTCAGAAAATCT+AGG 0.491219 2.1:-11083853 None:intergenic
CAAGGGTAGGGTATTTGCAT+TGG 0.493438 2.1:+11083007 MS.gene055841:CDS
GGGTAGGGTATTTGCATTGG+AGG 0.495563 2.1:+11083010 MS.gene055841:CDS
ATCTGTGACTGTAGTGAAGC+AGG 0.498133 2.1:+11082505 MS.gene055841:CDS
TCAGTTCATTGTTCTTGCCT+CGG 0.500431 2.1:+11083178 MS.gene055841:CDS
TGCGGTGTGTTCGATGGCCA+TGG 0.500762 2.1:+11082209 MS.gene055841:CDS
TGTGTAGGAGGAGGAAAAGG+AGG 0.506060 2.1:+11083733 MS.gene055841:CDS
AGCTTTCATGAAGGCATACA+AGG 0.511427 2.1:+11082424 MS.gene055841:CDS
CAAGAACAATGAACTGATCT+CGG 0.513831 2.1:-11083172 None:intergenic
CCTAGTAGCACGCAAAGTTA+GGG 0.515838 2.1:+11082244 MS.gene055841:CDS
CTCGCTGCCGATGATCGACT+TGG 0.523251 2.1:-11083451 None:intergenic
TTCGATGGCCATGGTCCATA+CGG 0.524180 2.1:+11082218 MS.gene055841:CDS
GCTGTACCAGTGAGTTTACT+CGG 0.525049 2.1:-11083828 None:intergenic
ATCTTCTGCGGTGTGTTCGA+TGG 0.528423 2.1:+11082203 MS.gene055841:CDS
GCTCTAGCCATTGCTAATCC+AGG 0.531526 2.1:-11083077 None:intergenic
AATCCAGGTGCATCATCAAA+AGG 0.541135 2.1:-11083062 None:intergenic
TGAGGTGAGTTCTATGTGGA+GGG 0.545772 2.1:+11082400 MS.gene055841:CDS
TAATTTCTCTGCTCAGGATG+AGG 0.548510 2.1:+11082382 MS.gene055841:CDS
AAGTCGATCATCGGCAGCGA+GGG 0.548909 2.1:+11083453 MS.gene055841:CDS
GTTCCTTCGCAAAGATGGCT+CGG 0.550410 2.1:-11083677 None:intergenic
AAGAGCAATCATGGGATCCA+AGG 0.551093 2.1:+11082802 MS.gene055841:CDS
GATCTCGGTCTGTGAGAAGC+CGG 0.551873 2.1:-11083157 None:intergenic
ACTTACTTCCCATACAATCA+TGG 0.552828 2.1:-11082043 None:intergenic
TATAATGAGACATGTGTAGG+AGG 0.553514 2.1:+11083721 MS.gene055841:CDS
AAGGACATAAAGCTTGAAAG+TGG 0.554778 2.1:+11082347 MS.gene055841:CDS
ATCAGCACCAAGTCGATCAT+CGG 0.562467 2.1:+11083444 MS.gene055841:CDS
CCTGTTGCTTTGGATGGTTG+CGG 0.563383 2.1:-11083614 None:intergenic
GGATGAACCAGAAGTTTGTA+GGG 0.564180 2.1:+11083031 MS.gene055841:CDS
GAAATTTCTTACACCATCCG+AGG 0.565735 2.1:-11083195 None:intergenic
ATCGGCAGCGAGGGTTCTGG+TGG 0.567760 2.1:+11083462 MS.gene055841:CDS
AATCCAGTTGAGTCAGATGA+TGG 0.571512 2.1:+11083646 MS.gene055841:CDS
TGGAATCTGCCGCACGAGAG+TGG 0.576177 2.1:+11083482 MS.gene055841:CDS
AATGAGACATGTGTAGGAGG+AGG 0.580853 2.1:+11083724 MS.gene055841:CDS
TCTTGTATATTTACGCAGCA+GGG 0.584645 2.1:+11081997 MS.gene055841:CDS
AATCCGATTTCAAGACAAGA+TGG 0.585814 2.1:-11081868 None:intergenic
ACATGTCTCATTATATTCTG+AGG 0.588314 2.1:-11083713 None:intergenic
TCAAGATGCCATGATTGTAT+GGG 0.591058 2.1:+11082035 MS.gene055841:CDS
CAATAGAAGTAATGACGGCT+CGG 0.592065 2.1:+11081840 MS.gene055841:CDS
CGTGCTACTAGGTGACCGTA+TGG 0.603429 2.1:-11082233 None:intergenic
CTGTACCTGAATTTACGCAC+CGG 0.609120 2.1:+11083138 MS.gene055841:CDS
TTTACGCAGCAGGGTCGTAA+GGG 0.610094 2.1:+11082006 MS.gene055841:CDS
CATGAAGGCATACAAGGCCA+TGG 0.610791 2.1:+11082430 MS.gene055841:CDS
ACAAGCAATAGAAGTAATGA+CGG 0.615043 2.1:+11081835 MS.gene055841:CDS
AGTCCGAGCCATCTTTGCGA+AGG 0.615130 2.1:+11083674 MS.gene055841:CDS
GAATATAATGAGACATGTGT+AGG 0.617364 2.1:+11083718 MS.gene055841:CDS
ATGAGGTGAGTTCTATGTGG+AGG 0.619424 2.1:+11082399 MS.gene055841:CDS
GAGTCTGTCGATGTTGAAGA+CGG 0.621885 2.1:+11083757 MS.gene055841:CDS
GGTGATTCAAGAGCAATCAT+GGG 0.631261 2.1:+11082794 MS.gene055841:CDS
CTGTACCAGTGAGTTTACTC+GGG 0.631787 2.1:-11083827 None:intergenic
TATTTAGTAATGGAAAGAGT+CGG 0.646864 2.1:+11081971 MS.gene055841:CDS
GTGGAGGGAAGCTTTCATGA+AGG 0.654164 2.1:+11082415 MS.gene055841:CDS
TCAGAAGATGCGATCTTCTG+CGG 0.654370 2.1:+11082191 MS.gene055841:CDS
AGGATGAGGTGAGTTCTATG+TGG 0.654574 2.1:+11082396 MS.gene055841:CDS
CAAGTCGATCATCGGCAGCG+AGG 0.659177 2.1:+11083452 MS.gene055841:CDS
TGTCTTGAAATCGGATTGTG+TGG 0.666044 2.1:+11081874 MS.gene055841:CDS
TGTCACCCGAGTAAACTCAC+TGG 0.671131 2.1:+11083822 MS.gene055841:CDS
CATAAAGCTTGAAAGTGGAG+AGG 0.675886 2.1:+11082352 MS.gene055841:CDS
CTAGGTGACCGTATGGACCA+TGG 0.681676 2.1:-11082226 None:intergenic
TGATGCACCTGGATTAGCAA+TGG 0.684010 2.1:+11083070 MS.gene055841:CDS
TTTAAGTTTCCACTCTCGTG+CGG 0.690625 2.1:-11083491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACATAAATTTAAACA+TGG - chr2.1:11082914-11082933 None:intergenic 10.0%
!! TCATAAATATTATTTATATG+AGG + chr2.1:11083280-11083299 MS.gene055841:intron 10.0%
!!! AAAAATGAAAGCAATTTTAT+CGG - chr2.1:11082278-11082297 None:intergenic 15.0%
!!! TTTTGATTTTTGTTTTCTTT+AGG + chr2.1:11082160-11082179 MS.gene055841:intron 15.0%
!! AGAAAACAAAAATCAAAACT+AGG - chr2.1:11082158-11082177 None:intergenic 20.0%
!! TGATGCAATAATATTCTTAT+AGG + chr2.1:11082960-11082979 MS.gene055841:intron 20.0%
!! TGTTCAAAAGAAAACATATA+CGG - chr2.1:11082703-11082722 None:intergenic 20.0%
!!! ATATGTTTTCTTTTGAACAA+GGG + chr2.1:11082704-11082723 MS.gene055841:intron 20.0%
!!! GATAAAATTGCTTTCATTTT+TGG + chr2.1:11082277-11082296 MS.gene055841:CDS 20.0%
!!! TATATGTTTTCTTTTGAACA+AGG + chr2.1:11082703-11082722 MS.gene055841:intron 20.0%
!!! TTATTTTCTTCACTTTTTCA+GGG + chr2.1:11082746-11082765 MS.gene055841:intron 20.0%
! AAAGAAAACATATACGGAAA+AGG - chr2.1:11082697-11082716 None:intergenic 25.0%
! ACTAAATATTCTGTTTGGTA+AGG - chr2.1:11081959-11081978 None:intergenic 25.0%
! ATTACGGGATTAAAATACTA+CGG - chr2.1:11082650-11082669 None:intergenic 25.0%
! CCAAACAGAATATTTAGTAA+TGG + chr2.1:11081961-11081980 MS.gene055841:CDS 25.0%
! CCATTACTAAATATTCTGTT+TGG - chr2.1:11081964-11081983 None:intergenic 25.0%
! TAAATATCCAACTTCGAAAA+TGG + chr2.1:11083510-11083529 MS.gene055841:CDS 25.0%
! TCAAGAGTAATCTTGTAATT+TGG + chr2.1:11082623-11082642 MS.gene055841:intron 25.0%
!! AATTTGTTCATGGGTAATAT+TGG + chr2.1:11082773-11082792 MS.gene055841:CDS 25.0%
!! AGTAAGTATGTTTCATGTTT+TGG + chr2.1:11082059-11082078 MS.gene055841:intron 25.0%
!! GAAAGAATTAAAAAGTGCAA+GGG + chr2.1:11082990-11083009 MS.gene055841:CDS 25.0%
!! TATTTAGTAATGGAAAGAGT+CGG + chr2.1:11081971-11081990 MS.gene055841:CDS 25.0%
!! TGAAAGAATTAAAAAGTGCA+AGG + chr2.1:11082989-11083008 MS.gene055841:CDS 25.0%
!!! CTTATTTTCTTCACTTTTTC+AGG + chr2.1:11082745-11082764 MS.gene055841:intron 25.0%
AACACACACAATTTGATTAC+GGG - chr2.1:11082665-11082684 None:intergenic 30.0%
ACAAGCAATAGAAGTAATGA+CGG + chr2.1:11081835-11081854 MS.gene055841:CDS 30.0%
ACATGTCTCATTATATTCTG+AGG - chr2.1:11083716-11083735 None:intergenic 30.0%
ACTCATAGTTTACTGATAAG+TGG + chr2.1:11082587-11082606 MS.gene055841:intron 30.0%
ATGATTTCATATGACACACT+TGG - chr2.1:11082884-11082903 None:intergenic 30.0%
GAACACACACAATTTGATTA+CGG - chr2.1:11082666-11082685 None:intergenic 30.0%
GAATATAATGAGACATGTGT+AGG + chr2.1:11083718-11083737 MS.gene055841:CDS 30.0%
! AATTAAAAAGTGCAAGGGTA+GGG + chr2.1:11082995-11083014 MS.gene055841:CDS 30.0%
!! TTCCTAGATTTTCTGAAGAA+CGG + chr2.1:11083851-11083870 MS.gene055841:CDS 30.0%
!!! AATTTGGACTGTTTTTGTAG+TGG + chr2.1:11082476-11082495 MS.gene055841:CDS 30.0%
!!! TCTATTTTTGGATGGGAAAA+TGG + chr2.1:11083552-11083571 MS.gene055841:CDS 30.0%
!!! TTGTGTGTCTATTTTTGGAT+GGG + chr2.1:11083545-11083564 MS.gene055841:CDS 30.0%
AAGGACATAAAGCTTGAAAG+TGG + chr2.1:11082347-11082366 MS.gene055841:CDS 35.0%
AATCCGATTTCAAGACAAGA+TGG - chr2.1:11081871-11081890 None:intergenic 35.0%
ACGATCAGCATCTATCATAT+TGG + chr2.1:11082535-11082554 MS.gene055841:intron 35.0%
ACTCCATCTTGTCTTGAAAT+CGG + chr2.1:11081865-11081884 MS.gene055841:CDS 35.0%
ACTTACTTCCCATACAATCA+TGG - chr2.1:11082046-11082065 None:intergenic 35.0%
ATCAAGATGCCATGATTGTA+TGG + chr2.1:11082034-11082053 MS.gene055841:CDS 35.0%
CAAGAACAATGAACTGATCT+CGG - chr2.1:11083175-11083194 None:intergenic 35.0%
CTCAAACCTTTGTCTTCTTT+CGG + chr2.1:11083368-11083387 MS.gene055841:intron 35.0%
CTTCTTGGAAAAAGCTTTAC+TGG - chr2.1:11082330-11082349 None:intergenic 35.0%
TAGTTTACTGATAAGTGGAC+AGG + chr2.1:11082592-11082611 MS.gene055841:intron 35.0%
TATAATGAGACATGTGTAGG+AGG + chr2.1:11083721-11083740 MS.gene055841:CDS 35.0%
TCAAGATGCCATGATTGTAT+GGG + chr2.1:11082035-11082054 MS.gene055841:CDS 35.0%
TCATTGAATGAAGACAGACT+TGG + chr2.1:11082104-11082123 MS.gene055841:intron 35.0%
TCTTGTATATTTACGCAGCA+GGG + chr2.1:11081997-11082016 MS.gene055841:CDS 35.0%
TGAGAATAATTTCTCTGCTC+AGG + chr2.1:11082376-11082395 MS.gene055841:CDS 35.0%
TTCTTGTATATTTACGCAGC+AGG + chr2.1:11081996-11082015 MS.gene055841:CDS 35.0%
! ATTTGGCGATTTTTGCTTGA+AGG + chr2.1:11083100-11083119 MS.gene055841:CDS 35.0%
! CAGGGTTCAAATTTGTTCAT+GGG + chr2.1:11082764-11082783 MS.gene055841:intron 35.0%
! GAATTAAAAAGTGCAAGGGT+AGG + chr2.1:11082994-11083013 MS.gene055841:CDS 35.0%
! GATTTTTGCTTGAAGGAGTA+TGG + chr2.1:11083107-11083126 MS.gene055841:CDS 35.0%
! TCAGGGTTCAAATTTGTTCA+TGG + chr2.1:11082763-11082782 MS.gene055841:intron 35.0%
! TGAAAGCAATTTTATCGGCA+AGG - chr2.1:11082273-11082292 None:intergenic 35.0%
! TGCTGTTGTGTGTCTATTTT+TGG + chr2.1:11083540-11083559 MS.gene055841:CDS 35.0%
! TTCAAGCTTTATGTCCTTCT+TGG - chr2.1:11082345-11082364 None:intergenic 35.0%
!! CAGTAAAGCTTTTTCCAAGA+AGG + chr2.1:11082328-11082347 MS.gene055841:CDS 35.0%
!!! GTTGTGTGTCTATTTTTGGA+TGG + chr2.1:11083544-11083563 MS.gene055841:CDS 35.0%
AATCCAGGTGCATCATCAAA+AGG - chr2.1:11083065-11083084 None:intergenic 40.0%
AATCCAGTTGAGTCAGATGA+TGG + chr2.1:11083646-11083665 MS.gene055841:CDS 40.0%
AGGATGAACCAGAAGTTTGT+AGG + chr2.1:11083030-11083049 MS.gene055841:CDS 40.0%
CAAAACTGGTTAGGTCTAGA+AGG + chr2.1:11083799-11083818 MS.gene055841:CDS 40.0%
CAATAGAAGTAATGACGGCT+CGG + chr2.1:11081840-11081859 MS.gene055841:CDS 40.0%
CATAAAGCTTGAAAGTGGAG+AGG + chr2.1:11082352-11082371 MS.gene055841:CDS 40.0%
CATCAGCTGAAGATCAAAAC+TGG + chr2.1:11083785-11083804 MS.gene055841:CDS 40.0%
GAAATTTCTTACACCATCCG+AGG - chr2.1:11083198-11083217 None:intergenic 40.0%
GCTGAAGATCAAAACTGGTT+AGG + chr2.1:11083790-11083809 MS.gene055841:CDS 40.0%
GCTGAAGTCTCATGCAAATT+TGG + chr2.1:11082460-11082479 MS.gene055841:CDS 40.0%
GGATGAACCAGAAGTTTGTA+GGG + chr2.1:11083031-11083050 MS.gene055841:CDS 40.0%
GGTGATTCAAGAGCAATCAT+GGG + chr2.1:11082794-11082813 MS.gene055841:CDS 40.0%
TAATTTCTCTGCTCAGGATG+AGG + chr2.1:11082382-11082401 MS.gene055841:CDS 40.0%
TATGACACACTTGGCAAATC+AGG - chr2.1:11082875-11082894 None:intergenic 40.0%
TCAGTTCATTGTTCTTGCCT+CGG + chr2.1:11083178-11083197 MS.gene055841:CDS 40.0%
TGAAGACAGACTTGGAATCT+TGG + chr2.1:11082112-11082131 MS.gene055841:intron 40.0%
TGGTGATTCAAGAGCAATCA+TGG + chr2.1:11082793-11082812 MS.gene055841:CDS 40.0%
TGTCTTGAAATCGGATTGTG+TGG + chr2.1:11081874-11081893 MS.gene055841:CDS 40.0%
! AGCTTTCATGAAGGCATACA+AGG + chr2.1:11082424-11082443 MS.gene055841:CDS 40.0%
! CAGTCATCCATTTTCGAAGT+TGG - chr2.1:11083520-11083539 None:intergenic 40.0%
! TTAGCAATGGCTAGAGCATT+TGG + chr2.1:11083083-11083102 MS.gene055841:CDS 40.0%
! TTTAAGTTTCCACTCTCGTG+CGG - chr2.1:11083494-11083513 None:intergenic 40.0%
! TTTTGGATTCATCTGAGTCG+AGG + chr2.1:11082294-11082313 MS.gene055841:CDS 40.0%
!! GGATGTTTTGAGCAATGAAG+AGG + chr2.1:11083405-11083424 MS.gene055841:CDS 40.0%
!! TGTTTTGAGCAATGAAGAGG+TGG + chr2.1:11083408-11083427 MS.gene055841:CDS 40.0%
!!! TTACCTTTTGATGATGCACC+TGG + chr2.1:11083059-11083078 MS.gene055841:CDS 40.0%
AACCACACCCTACAAACTTC+TGG - chr2.1:11083041-11083060 None:intergenic 45.0%
AACCAGAAGTTTGTAGGGTG+TGG + chr2.1:11083036-11083055 MS.gene055841:CDS 45.0%
AAGAGCAATCATGGGATCCA+AGG + chr2.1:11082802-11082821 MS.gene055841:CDS 45.0%
AATGAGACATGTGTAGGAGG+AGG + chr2.1:11083724-11083743 MS.gene055841:CDS 45.0%
ACATGTGTAGGAGGAGGAAA+AGG + chr2.1:11083730-11083749 MS.gene055841:CDS 45.0%
ACCTAGTAGCACGCAAAGTT+AGG + chr2.1:11082243-11082262 MS.gene055841:CDS 45.0%
AGACTTCAGCTCTTTGTCCA+TGG - chr2.1:11082450-11082469 None:intergenic 45.0%
AGGATGAGGTGAGTTCTATG+TGG + chr2.1:11082396-11082415 MS.gene055841:CDS 45.0%
ATCAGCACCAAGTCGATCAT+CGG + chr2.1:11083444-11083463 MS.gene055841:CDS 45.0%
ATCCAAAGCAACAGGCATTC+AGG + chr2.1:11083622-11083641 MS.gene055841:CDS 45.0%
ATCTGTGACTGTAGTGAAGC+AGG + chr2.1:11082505-11082524 MS.gene055841:CDS 45.0%
ATGAGGTGAGTTCTATGTGG+AGG + chr2.1:11082399-11082418 MS.gene055841:CDS 45.0%
CAAGGACAGCAATGACTTGA+TGG + chr2.1:11082820-11082839 MS.gene055841:CDS 45.0%
CAGAGACCGAAAGAAGACAA+AGG - chr2.1:11083377-11083396 None:intergenic 45.0%
CATCAAGTCATTGCTGTCCT+TGG - chr2.1:11082822-11082841 None:intergenic 45.0%
CCTAGTAGCACGCAAAGTTA+GGG + chr2.1:11082244-11082263 MS.gene055841:CDS 45.0%
CTGTACCAGTGAGTTTACTC+GGG - chr2.1:11083830-11083849 None:intergenic 45.0%
CTGTACCTGAATTTACGCAC+CGG + chr2.1:11083138-11083157 MS.gene055841:CDS 45.0%
CTTTCGGTCTCTGCAGATAT+GGG + chr2.1:11083384-11083403 MS.gene055841:intron 45.0%
GAGTCTGTCGATGTTGAAGA+CGG + chr2.1:11083757-11083776 MS.gene055841:CDS 45.0%
GCTGTACCAGTGAGTTTACT+CGG - chr2.1:11083831-11083850 None:intergenic 45.0%
GGCCGTTCTTCAGAAAATCT+AGG - chr2.1:11083856-11083875 None:intergenic 45.0%
GTGAAGTTCCTTCGCAAAGA+TGG - chr2.1:11083685-11083704 None:intergenic 45.0%
TCAGAAGATGCGATCTTCTG+CGG + chr2.1:11082191-11082210 MS.gene055841:CDS 45.0%
TCTTTCGGTCTCTGCAGATA+TGG + chr2.1:11083383-11083402 MS.gene055841:intron 45.0%
TGACCATCATCTGACTCAAC+TGG - chr2.1:11083652-11083671 None:intergenic 45.0%
TGAGGTGAGTTCTATGTGGA+GGG + chr2.1:11082400-11082419 MS.gene055841:CDS 45.0%
TTCATTGTTCTTGCCTCGGA+TGG + chr2.1:11083182-11083201 MS.gene055841:CDS 45.0%
! CAAGGGTAGGGTATTTGCAT+TGG + chr2.1:11083007-11083026 MS.gene055841:CDS 45.0%
!! TGAATGCCTGTTGCTTTGGA+TGG - chr2.1:11083623-11083642 None:intergenic 45.0%
!! TGATGCACCTGGATTAGCAA+TGG + chr2.1:11083070-11083089 MS.gene055841:CDS 45.0%
AGAAGCCGGTGCGTAAATTC+AGG - chr2.1:11083146-11083165 None:intergenic 50.0%
ATCTTCTGCGGTGTGTTCGA+TGG + chr2.1:11082203-11082222 MS.gene055841:CDS 50.0%
ATTTACGCAGCAGGGTCGTA+AGG + chr2.1:11082005-11082024 MS.gene055841:CDS 50.0%
GCTCTAGCCATTGCTAATCC+AGG - chr2.1:11083080-11083099 None:intergenic 50.0%
GTGGAGGGAAGCTTTCATGA+AGG + chr2.1:11082415-11082434 MS.gene055841:CDS 50.0%
GTTCCTTCGCAAAGATGGCT+CGG - chr2.1:11083680-11083699 None:intergenic 50.0%
TGTCACCCGAGTAAACTCAC+TGG + chr2.1:11083822-11083841 MS.gene055841:CDS 50.0%
TGTGTAGGAGGAGGAAAAGG+AGG + chr2.1:11083733-11083752 MS.gene055841:CDS 50.0%
TTCGATGGCCATGGTCCATA+CGG + chr2.1:11082218-11082237 MS.gene055841:CDS 50.0%
TTTACGCAGCAGGGTCGTAA+GGG + chr2.1:11082006-11082025 MS.gene055841:CDS 50.0%
! CATGAAGGCATACAAGGCCA+TGG + chr2.1:11082430-11082449 MS.gene055841:CDS 50.0%
! CCCTAACTTTGCGTGCTACT+AGG - chr2.1:11082247-11082266 None:intergenic 50.0%
! GGGTAGGGTATTTGCATTGG+AGG + chr2.1:11083010-11083029 MS.gene055841:CDS 50.0%
! TGCCTGAATGCCTGTTGCTT+TGG - chr2.1:11083627-11083646 None:intergenic 50.0%
!! CCTGTTGCTTTGGATGGTTG+CGG - chr2.1:11083617-11083636 None:intergenic 50.0%
AAGTCGATCATCGGCAGCGA+GGG + chr2.1:11083453-11083472 MS.gene055841:CDS 55.0%
AGTCCGAGCCATCTTTGCGA+AGG + chr2.1:11083674-11083693 MS.gene055841:CDS 55.0%
CCGCAACCATCCAAAGCAAC+AGG + chr2.1:11083614-11083633 MS.gene055841:CDS 55.0%
CTAGGTGACCGTATGGACCA+TGG - chr2.1:11082229-11082248 None:intergenic 55.0%
GATCTCGGTCTGTGAGAAGC+CGG - chr2.1:11083160-11083179 None:intergenic 55.0%
! CGTGCTACTAGGTGACCGTA+TGG - chr2.1:11082236-11082255 None:intergenic 55.0%
ATCATCGGCAGCGAGGGTTC+TGG + chr2.1:11083459-11083478 MS.gene055841:CDS 60.0%
CAAGTCGATCATCGGCAGCG+AGG + chr2.1:11083452-11083471 MS.gene055841:CDS 60.0%
CTCGCTGCCGATGATCGACT+TGG - chr2.1:11083454-11083473 None:intergenic 60.0%
TGCGGTGTGTTCGATGGCCA+TGG + chr2.1:11082209-11082228 MS.gene055841:CDS 60.0%
TGGAATCTGCCGCACGAGAG+TGG + chr2.1:11083482-11083501 MS.gene055841:CDS 60.0%
! ATCGGCAGCGAGGGTTCTGG+TGG + chr2.1:11083462-11083481 MS.gene055841:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 11081817 11083885 11081817 ID=MS.gene055841
chr2.1 mRNA 11081817 11083885 11081817 ID=MS.gene055841.t1;Parent=MS.gene055841
chr2.1 exon 11081817 11082059 11081817 ID=MS.gene055841.t1.exon1;Parent=MS.gene055841.t1
chr2.1 CDS 11081817 11082059 11081817 ID=cds.MS.gene055841.t1;Parent=MS.gene055841.t1
chr2.1 exon 11082182 11082526 11082182 ID=MS.gene055841.t1.exon2;Parent=MS.gene055841.t1
chr2.1 CDS 11082182 11082526 11082182 ID=cds.MS.gene055841.t1;Parent=MS.gene055841.t1
chr2.1 exon 11082767 11082884 11082767 ID=MS.gene055841.t1.exon3;Parent=MS.gene055841.t1
chr2.1 CDS 11082767 11082884 11082767 ID=cds.MS.gene055841.t1;Parent=MS.gene055841.t1
chr2.1 exon 11082982 11083205 11082982 ID=MS.gene055841.t1.exon4;Parent=MS.gene055841.t1
chr2.1 CDS 11082982 11083205 11082982 ID=cds.MS.gene055841.t1;Parent=MS.gene055841.t1
chr2.1 exon 11083400 11083885 11083400 ID=MS.gene055841.t1.exon5;Parent=MS.gene055841.t1
chr2.1 CDS 11083400 11083885 11083400 ID=cds.MS.gene055841.t1;Parent=MS.gene055841.t1
Gene Sequence

>MS.gene055841

ATGGGGTGTTGTGTCTCAACAAGCAATAGAAGTAATGACGGCTCGGTTACTCCATCTTGTCTTGAAATCGGATTGTGTGGTCAAAAGAAAGCAAGAAGAACATTCTCTGATCATGTTGTCTCTCTGAACAAGTTAGCATCCTTACCAAACAGAATATTTAGTAATGGAAAGAGTCGGTCTTCTTGTATATTTACGCAGCAGGGTCGTAAGGGTGTTAATCAAGATGCCATGATTGTATGGGAAGTAAGTATGTTTCATGTTTTGGTTGTTTTGATGATGTTTGATTCTCATTGAATGAAGACAGACTTGGAATCTTGGTTATTTTTTGAAATTTACATCCTAGTTTTGATTTTTGTTTTCTTTAGGATTTTGTGTCAGAAGATGCGATCTTCTGCGGTGTGTTCGATGGCCATGGTCCATACGGTCACCTAGTAGCACGCAAAGTTAGGGATGCCTTGCCGATAAAATTGCTTTCATTTTTGGATTCATCTGAGTCGAGGCAAAATGAATCCAGTAAAGCTTTTTCCAAGAAGGACATAAAGCTTGAAAGTGGAGAGGCTGAGAATAATTTCTCTGCTCAGGATGAGGTGAGTTCTATGTGGAGGGAAGCTTTCATGAAGGCATACAAGGCCATGGACAAAGAGCTGAAGTCTCATGCAAATTTGGACTGTTTTTGTAGTGGAAGCACATCTGTGACTGTAGTGAAGCAGGTAGATCAACGATCAGCATCTATCATATTGGTTTTGTTTCTTTTATAAATTTCTGTAGAGACTCATAGTTTACTGATAAGTGGACAGGTTGCTCGTTCAAGAGTAATCTTGTAATTTGGACCGTAGTATTTTAATCCCGTAATCAAATTGTGTGTGTTCTTTGTTTGCCTTTTCCGTATATGTTTTCTTTTGAACAAGGGTTGCTGTTCTAACAATTTCTTATTTTCTTCACTTTTTCAGGGTTCAAATTTGTTCATGGGTAATATTGGTGATTCAAGAGCAATCATGGGATCCAAGGACAGCAATGACTTGATGGTTGCAATTCAGCTGACAGTTGATTTAAAACCTGATTTGCCAAGTGTGTCATATGAAATCATCTTTTATCCATGTTTAAATTTATGTTTTTTAGCTTGTTGTTAACATATTCAAACTTTGATGCAATAATATTCTTATAGGAGAAGCTGAAAGAATTAAAAAGTGCAAGGGTAGGGTATTTGCATTGGAGGATGAACCAGAAGTTTGTAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGCTTGAAGGAGTATGGTGTGATTTCTGTACCTGAATTTACGCACCGGCTTCTCACAGACCGAGATCAGTTCATTGTTCTTGCCTCGGATGGTGTAAGAAATTTCAATTTCATATCTACTGTATATTTGATTGTTCAGTTTTTTTTTCTATTTCAGAAATTTCAATTTCATAAATATTATTTATATGAGGAAAGTTATAGAGAAAAAAATGTTATTTAATTCTATGACACTTCGCAAAAAAGTTTAATGTTATGTCTCAAACCTTTGTCTTCTTTCGGTCTCTGCAGATATGGGATGTTTTGAGCAATGAAGAGGTGGTAGAAATAGTATCATCAGCACCAAGTCGATCATCGGCAGCGAGGGTTCTGGTGGAATCTGCCGCACGAGAGTGGAAACTTAAATATCCAACTTCGAAAATGGATGACTGTGCTGTTGTGTGTCTATTTTTGGATGGGAAAATGGACTCAGAAGAATCTGATTGTGATGAACAATGCTATTCTTCCGCAACCATCCAAAGCAACAGGCATTCAGGCAATCCAGTTGAGTCAGATGATGGTCAAAAGTCCGAGCCATCTTTGCGAAGGAACTTCACTGTGAGAACCTCAGAATATAATGAGACATGTGTAGGAGGAGGAAAAGGAGGAGAGTCTGTCGATGTTGAAGACGGAACATCATCAGCTGAAGATCAAAACTGGTTAGGTCTAGAAGGTGTCACCCGAGTAAACTCACTGGTACAGCTTCCTAGATTTTCTGAAGAACGGCCAAACTCTTGA

Protein sequence

>MS.gene055841.t1

MGCCVSTSNRSNDGSVTPSCLEIGLCGQKKARRTFSDHVVSLNKLASLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFVSEDAIFCGVFDGHGPYGHLVARKVRDALPIKLLSFLDSSESRQNESSKAFSKKDIKLESGEAENNFSAQDEVSSMWREAFMKAYKAMDKELKSHANLDCFCSGSTSVTVVKQGSNLFMGNIGDSRAIMGSKDSNDLMVAIQLTVDLKPDLPREAERIKKCKGRVFALEDEPEVCRVWLPFDDAPGLAMARAFGDFCLKEYGVISVPEFTHRLLTDRDQFIVLASDGIWDVLSNEEVVEIVSSAPSRSSAARVLVESAAREWKLKYPTSKMDDCAVVCLFLDGKMDSEESDCDEQCYSSATIQSNRHSGNPVESDDGQKSEPSLRRNFTVRTSEYNETCVGGGKGGESVDVEDGTSSAEDQNWLGLEGVTRVNSLVQLPRFSEERPNS