AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060310.t1 MTR_1g107235 98.565 418 6 0 1 418 1 418 0.0 863
MS.gene060310.t1 MTR_1g107235 95.130 308 9 2 1 302 1 308 0.0 605
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060310.t1 AT1G49820 77.218 417 93 1 3 417 2 418 0.0 689

Find 78 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAAATTGTTGGCGATTT+TGG 0.157847 1.2:+79844219 None:intergenic
CCCAAAGTGCAGTGAATTTA+TGG 0.184173 1.2:+79841307 None:intergenic
ATTCCTAGGAAATTTGATTT+TGG 0.220071 1.2:-79842423 MS.gene060310:CDS
AAAGAGACACCTTATCATTT+TGG 0.222077 1.2:+79841158 None:intergenic
TTTGATTGGTATGCGTTATT+TGG 0.235748 1.2:-79843877 MS.gene060310:CDS
TTATACTCAGAAACTTTATA+TGG 0.271029 1.2:+79842764 None:intergenic
TTGTGTTATGCAGGCATATA+AGG 0.291604 1.2:-79841373 MS.gene060310:intron
CGATCAAAATGATAGATTTC+AGG 0.301010 1.2:+79843909 None:intergenic
CCATAAATTCACTGCACTTT+GGG 0.304944 1.2:-79841307 MS.gene060310:CDS
TACGCTCTTTCTTTCGTCAT+TGG 0.331826 1.2:+79843984 None:intergenic
AAACGATGAAGACGAAATTA+AGG 0.335482 1.2:+79844164 None:intergenic
GTTCTACCACGGAGCATAAA+CGG 0.342649 1.2:-79843737 MS.gene060310:CDS
GGTCCATAAAATGCAAATTC+AGG 0.347893 1.2:+79842467 None:intergenic
TTTCATGACAGTCTCGGATT+TGG 0.351720 1.2:-79841186 MS.gene060310:CDS
CCGTGATGCTGAAGCTGTTC+GGG 0.358308 1.2:-79842717 MS.gene060310:CDS
GATCGTACTATGTCTTTGAT+TGG 0.376412 1.2:-79843891 MS.gene060310:CDS
CTCAGAAAAGGCTTGATTGT+TGG 0.378937 1.2:-79843837 MS.gene060310:CDS
TCAGGATTGTTATAGATTCC+TGG 0.385724 1.2:+79841249 None:intergenic
CTATAGCTGACGCTGGTAAA+CGG 0.393225 1.2:-79839749 MS.gene060310:CDS
TCTACACACTGGTTCTGTTA+TGG 0.396159 1.2:-79842519 MS.gene060310:CDS
GCTGGTGAGGCATATCTTCC+AGG 0.401989 1.2:-79841267 MS.gene060310:CDS
ACCATAAATTCACTGCACTT+TGG 0.416058 1.2:-79841308 MS.gene060310:CDS
ACCGTGATGCTGAAGCTGTT+CGG 0.416651 1.2:-79842718 MS.gene060310:CDS
CTGATACACAGGAGAATTGT+TGG 0.419083 1.2:-79839798 MS.gene060310:intron
TATAGCTGACGCTGGTAAAC+GGG 0.426953 1.2:-79839748 MS.gene060310:CDS
TTCATTTAGGTTCTGTGAGA+GGG 0.429000 1.2:-79842564 MS.gene060310:intron
TTCTACCACGGAGCATAAAC+GGG 0.443750 1.2:-79843736 MS.gene060310:CDS
GCCATCTCCGACTTCTTTGA+CGG 0.448574 1.2:+79844189 None:intergenic
TGGTGTTGAGTATCCTTTGT+TGG 0.450574 1.2:-79843817 MS.gene060310:CDS
TGTACAAGTAGTTGAACATC+AGG 0.451446 1.2:+79841231 None:intergenic
TCTCCTATGCAACGAACATA+TGG 0.451892 1.2:+79844014 None:intergenic
TTAAGACAATTGCAGACACT+TGG 0.472640 1.2:-79841341 MS.gene060310:CDS
GCGGGAATGTGGAGTTATGC+AGG 0.477746 1.2:-79842814 MS.gene060310:CDS
TTTGATATCGGAGCATTCCT+AGG 0.479894 1.2:-79842437 MS.gene060310:CDS
TATACTCAGAAACTTTATAT+GGG 0.482549 1.2:+79842765 None:intergenic
AAGCCAAAATCAAATTTCCT+AGG 0.485089 1.2:+79842420 None:intergenic
ACGGGCAACCTGTGAACGGC+GGG 0.494513 1.2:-79839730 MS.gene060310:CDS
TAGATTTCAGGAACATGATC+AGG 0.496713 1.2:+79843921 None:intergenic
TTACCATATGTTCGTTGCAT+AGG 0.497556 1.2:-79844017 MS.gene060310:CDS
TAGGTTCTGTGAGAGGGCTC+AGG 0.499778 1.2:-79842558 MS.gene060310:CDS
ATCAAGTGCCCGCCGTTCAC+AGG 0.500202 1.2:+79839722 None:intergenic
GTTCATTTAGGTTCTGTGAG+AGG 0.506829 1.2:-79842565 MS.gene060310:intron
TTTGGATGAAAGTGCAGGGA+TGG 0.506921 1.2:+79844237 None:intergenic
GACTTCTTTGACGGATAAGT+CGG 0.509303 1.2:+79844198 None:intergenic
GTTATGCAGGCTCACTGAGC+AGG 0.511628 1.2:-79842801 MS.gene060310:CDS
CCACATATAATTCTCAGAAA+AGG 0.520216 1.2:-79843849 MS.gene060310:CDS
TTTCTGAGAATTATATGTGG+TGG 0.520245 1.2:+79843852 None:intergenic
GGATAAGTCGGAGAAATTGT+TGG 0.537875 1.2:+79844210 None:intergenic
TTGGCGCTGCCAAAATGATA+AGG 0.541695 1.2:-79841167 MS.gene060310:intron
GATTTATTTCATGACAGTCT+CGG 0.544205 1.2:-79841192 MS.gene060310:CDS
GTTTATGCTCCGTGGTAGAA+CGG 0.550540 1.2:+79843739 None:intergenic
CAGCATCACGGTCAAGATGA+GGG 0.555661 1.2:+79842729 None:intergenic
TTATGCAGGCATATAAGGAA+TGG 0.565476 1.2:-79841368 MS.gene060310:intron
TGTTGGTGTGGCACATGTTG+AGG 0.565977 1.2:-79839781 MS.gene060310:CDS
TTCGTTGCATAGGAGAATCA+TGG 0.568476 1.2:-79844007 MS.gene060310:CDS
AAGTTTCTGAGTATAATCGC+TGG 0.568636 1.2:-79842757 MS.gene060310:CDS
GACAAAAGAACCGTTGGTGT+TGG 0.569843 1.2:+79844141 None:intergenic
GACTTATCCGTCAAAGAAGT+CGG 0.577212 1.2:-79844196 MS.gene060310:CDS
GTCATTGGCGTTGAAAGAAG+AGG 0.581400 1.2:-79843955 MS.gene060310:CDS
TCCGTCAAAGAAGTCGGAGA+TGG 0.584966 1.2:-79844190 MS.gene060310:CDS
TCAGCATCACGGTCAAGATG+AGG 0.591643 1.2:+79842728 None:intergenic
CCCGAACAGCTTCAGCATCA+CGG 0.604502 1.2:+79842717 None:intergenic
GTAAACGGGCAACCTGTGAA+CGG 0.615166 1.2:-79839734 MS.gene060310:CDS
TTCATCGTTTCCAACACCAA+CGG 0.620059 1.2:-79844151 MS.gene060310:CDS
AACGGGCAACCTGTGAACGG+CGG 0.625939 1.2:-79839731 MS.gene060310:CDS
GCTCCGATATCAAAACCCAT+TGG 0.631526 1.2:+79842446 None:intergenic
AGCATCACGGTCAAGATGAG+GGG 0.631550 1.2:+79842730 None:intergenic
TCATTGGCGTTGAAAGAAGA+GGG 0.636857 1.2:-79843954 MS.gene060310:CDS
CTTGAATCTATAGCTGACGC+TGG 0.642125 1.2:-79839756 MS.gene060310:CDS
TCTGCTTTACCGTTCTACCA+CGG 0.645741 1.2:-79843748 MS.gene060310:CDS
TTTGATGACAAAAGAACCGT+TGG 0.648397 1.2:+79844135 None:intergenic
AGGGCTCAGGCACTAATACA+CGG 0.649727 1.2:-79842545 MS.gene060310:CDS
GACATGTGATCAGCCAACAA+AGG 0.649738 1.2:+79843804 None:intergenic
ACCGTCCCGTTTATGCTCCG+TGG 0.654333 1.2:+79843731 None:intergenic
AAAGTGCAGTGAATTTATGG+TGG 0.659695 1.2:+79841310 None:intergenic
ACCACGGAGCATAAACGGGA+CGG 0.676173 1.2:-79843732 MS.gene060310:intron
ACACAGGAGAATTGTTGGTG+TGG 0.730427 1.2:-79839793 MS.gene060310:intron
ATACACGGAGATCTACACAC+TGG 0.737182 1.2:-79842530 MS.gene060310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATAAAAAACAG+TGG - chr1.2:79843948-79843967 MS.gene060310:CDS 10.0%
!! TTAATAAAAACAATAATATG+AGG - chr1.2:79842830-79842849 MS.gene060310:intron 10.0%
!!! ATTATTGTTTTTATTAAAAG+AGG + chr1.2:79842827-79842846 None:intergenic 10.0%
!!! CTTTTTTCAATTTTTAATAA+TGG - chr1.2:79839879-79839898 MS.gene060310:intron 10.0%
!!! TAATAAGATAATATTTTTTC+GGG + chr1.2:79843510-79843529 None:intergenic 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - chr1.2:79843462-79843481 MS.gene060310:intron 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - chr1.2:79843461-79843480 MS.gene060310:intron 10.0%
!! AAAAACAAAAAAAAAAACAG+CGG - chr1.2:79843908-79843927 MS.gene060310:CDS 15.0%
!! AAGAATATTAATTGTCTATA+AGG + chr1.2:79840775-79840794 None:intergenic 15.0%
!! ATGAAAATTTATGTTCATTT+AGG - chr1.2:79841365-79841384 MS.gene060310:intron 15.0%
!! CAAACAAATAAATATGTTAA+GGG + chr1.2:79840265-79840284 None:intergenic 15.0%
!! CATTGTATAAATGATATATT+TGG + chr1.2:79843102-79843121 None:intergenic 15.0%
!! TCTAAATTAATAAATTTCTC+CGG + chr1.2:79843176-79843195 None:intergenic 15.0%
!!! AAACTCTTTAATTTAATACT+CGG + chr1.2:79843614-79843633 None:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG - chr1.2:79843538-79843557 MS.gene060310:intron 15.0%
!!! GTTAACTTTTTCTTATAAAT+AGG + chr1.2:79843033-79843052 None:intergenic 15.0%
!!! GTTGTTTTAATATATATTCA+CGG - chr1.2:79843764-79843783 MS.gene060310:CDS 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG + chr1.2:79843576-79843595 None:intergenic 15.0%
!!! TTGAAGTTTTTATTTTACTT+TGG - chr1.2:79841729-79841748 MS.gene060310:intron 15.0%
!! AAAGACTCAAATATTTACTA+AGG + chr1.2:79840699-79840718 None:intergenic 20.0%
!! AAGACTCAAATATTTACTAA+GGG + chr1.2:79840698-79840717 None:intergenic 20.0%
!! CTCTATAAATTAATAATGTC+AGG - chr1.2:79843149-79843168 MS.gene060310:intron 20.0%
!! GCAAACAAATAAATATGTTA+AGG + chr1.2:79840266-79840285 None:intergenic 20.0%
!! TAAATTATAGTGAGAGATTT+AGG - chr1.2:79843668-79843687 MS.gene060310:intron 20.0%
!! TATACTCAGAAACTTTATAT+GGG + chr1.2:79841180-79841199 None:intergenic 20.0%
!! TTATACTCAGAAACTTTATA+TGG + chr1.2:79841181-79841200 None:intergenic 20.0%
!!! AACAAAATTTTGTGCATTTT+TGG + chr1.2:79839859-79839878 None:intergenic 20.0%
!!! AAGTTTTTATTTTACTTTGG+TGG - chr1.2:79841732-79841751 MS.gene060310:intron 20.0%
!!! GCTTAAACTTTTAAGATAAT+TGG - chr1.2:79843802-79843821 MS.gene060310:CDS 20.0%
!!! TAGTCTTTTTCATTTGAAAA+TGG - chr1.2:79840721-79840740 MS.gene060310:intron 20.0%
!!! TATCTTTTGTTATAGAAAGA+GGG + chr1.2:79840456-79840475 None:intergenic 20.0%
!!! TATGATATCGTCTTTATTTA+TGG + chr1.2:79842133-79842152 None:intergenic 20.0%
!!! TTATCTTTTGTTATAGAAAG+AGG + chr1.2:79840457-79840476 None:intergenic 20.0%
!!! TTTATTTTAGATAAGCGTAA+TGG + chr1.2:79843937-79843956 None:intergenic 20.0%
! AAACTAAAAATTACTTCCTC+TGG - chr1.2:79843006-79843025 MS.gene060310:intron 25.0%
! AAGAATAGGAAATTTCAGAA+AGG - chr1.2:79842041-79842060 MS.gene060310:intron 25.0%
! AAGTCACATCTTAGTTTATT+TGG - chr1.2:79842969-79842988 MS.gene060310:intron 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + chr1.2:79840413-79840432 None:intergenic 25.0%
! ACAATCATTAGAGAGATAAA+TGG - chr1.2:79842918-79842937 MS.gene060310:intron 25.0%
! AGACTCAAATATTTACTAAG+GGG + chr1.2:79840697-79840716 None:intergenic 25.0%
! AGTCACATCTTAGTTTATTT+GGG - chr1.2:79842970-79842989 MS.gene060310:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG + chr1.2:79840412-79840431 None:intergenic 25.0%
! ATAGTAATATATAACCCACA+TGG - chr1.2:79840801-79840820 MS.gene060310:intron 25.0%
! ATGATATCCTAAAGATATGT+AGG + chr1.2:79841795-79841814 None:intergenic 25.0%
! ATGTCCATGTTTATGATTTA+TGG - chr1.2:79842886-79842905 MS.gene060310:intron 25.0%
! ATTTCAATTATCTGATACAC+AGG - chr1.2:79844133-79844152 MS.gene060310:CDS 25.0%
! CAGAATAGAATGAAAAGAAT+GGG + chr1.2:79841622-79841641 None:intergenic 25.0%
! CATTACAGAGTCAAATTTAA+GGG + chr1.2:79840327-79840346 None:intergenic 25.0%
! GTACAATAAATGTAAACAAG+AGG - chr1.2:79843387-79843406 MS.gene060310:intron 25.0%
! TAAATTAATAATGTCAGGAC+CGG - chr1.2:79843154-79843173 MS.gene060310:intron 25.0%
! TAACCCATAAATCATAAACA+TGG + chr1.2:79842893-79842912 None:intergenic 25.0%
! TAGTAATATATAACCCACAT+GGG - chr1.2:79840802-79840821 MS.gene060310:intron 25.0%
! TCAGAATAGAATGAAAAGAA+TGG + chr1.2:79841623-79841642 None:intergenic 25.0%
! TGTCCATGTTTATGATTTAT+GGG - chr1.2:79842887-79842906 MS.gene060310:intron 25.0%
! TGTGTATCAGATAATTGAAA+TGG + chr1.2:79844134-79844153 None:intergenic 25.0%
!! AATATGTTAAGGGTATGAAA+AGG + chr1.2:79840255-79840274 None:intergenic 25.0%
!! AATTTCCTATTCTTTGTTTG+TGG + chr1.2:79842035-79842054 None:intergenic 25.0%
!! ATCTTTTATGGACAAAGATT+AGG + chr1.2:79844089-79844108 None:intergenic 25.0%
!! CTCTAAAAAATATCATATGC+TGG + chr1.2:79842407-79842426 None:intergenic 25.0%
!! TATGCATTAGATTTTTCACA+TGG + chr1.2:79842010-79842029 None:intergenic 25.0%
!!! ATTCCTAGGAAATTTGATTT+TGG - chr1.2:79841519-79841538 MS.gene060310:intron 25.0%
!!! CTTTTTCATTTGAAAATGGA+TGG - chr1.2:79840725-79840744 MS.gene060310:intron 25.0%
!!! TTTCAGTTTTTTCTTTGTTG+AGG - chr1.2:79842499-79842518 MS.gene060310:CDS 25.0%
!!! TTTTTAGAGAATCAACATTC+TGG - chr1.2:79842418-79842437 MS.gene060310:CDS 25.0%
AAACGATGAAGACGAAATTA+AGG + chr1.2:79839781-79839800 None:intergenic 30.0%
AAGACATGTTATGTTACCAT+TGG - chr1.2:79841067-79841086 MS.gene060310:intron 30.0%
AAGCCAAAATCAAATTTCCT+AGG + chr1.2:79841525-79841544 None:intergenic 30.0%
ACATGATAGAGTAATTCTCA+TGG - chr1.2:79842367-79842386 MS.gene060310:intron 30.0%
ACTGTACATACCAAACAAAA+AGG - chr1.2:79843256-79843275 MS.gene060310:intron 30.0%
AGATATAGAATCGCAAAGTT+TGG + chr1.2:79842537-79842556 None:intergenic 30.0%
AGTTTATTTGGGCATTAGAA+GGG - chr1.2:79842981-79843000 MS.gene060310:intron 30.0%
AGTTTCTATTGTCGAAAAGA+TGG - chr1.2:79842944-79842963 MS.gene060310:intron 30.0%
ATAAGCCACAAACAAAGAAT+AGG - chr1.2:79842027-79842046 MS.gene060310:intron 30.0%
ATTGTCTATAAGGCATAAGA+AGG + chr1.2:79840765-79840784 None:intergenic 30.0%
CAATAAAGACATGGAAAAAG+AGG + chr1.2:79841598-79841617 None:intergenic 30.0%
CCACATATAATTCTCAGAAA+AGG - chr1.2:79840093-79840112 MS.gene060310:intron 30.0%
CCATTACAGAGTCAAATTTA+AGG + chr1.2:79840328-79840347 None:intergenic 30.0%
CCTTAAATTTGACTCTGTAA+TGG - chr1.2:79840325-79840344 MS.gene060310:intron 30.0%
CGATCAAAATGATAGATTTC+AGG + chr1.2:79840036-79840055 None:intergenic 30.0%
GATTTATTTCATGACAGTCT+CGG - chr1.2:79842750-79842769 MS.gene060310:CDS 30.0%
GGAAAAAAGTAGTTAGGAAA+GGG + chr1.2:79842229-79842248 None:intergenic 30.0%
TAACCATTGATACTAGTGTT+AGG + chr1.2:79842348-79842367 None:intergenic 30.0%
TAGTTTATTTGGGCATTAGA+AGG - chr1.2:79842980-79842999 MS.gene060310:intron 30.0%
TCTTTGTCCATAAAAGATTG+AGG - chr1.2:79844091-79844110 MS.gene060310:intron 30.0%
TGGTAACATAACATGTCTTA+AGG + chr1.2:79841066-79841085 None:intergenic 30.0%
TTATAAAAAAACTCGGCATC+CGG + chr1.2:79841001-79841020 None:intergenic 30.0%
TTATTTATGGCATATGCCTT+GGG + chr1.2:79842120-79842139 None:intergenic 30.0%
TTCTCTGAATTAGGATAACA+AGG + chr1.2:79841946-79841965 None:intergenic 30.0%
TTGGGACCGAAAATTATAAA+GGG - chr1.2:79843480-79843499 MS.gene060310:intron 30.0%
TTGTTATCCTAATTCAGAGA+AGG - chr1.2:79841945-79841964 MS.gene060310:intron 30.0%
TTTAACACATTGTGTTATGC+AGG - chr1.2:79842560-79842579 MS.gene060310:intron 30.0%
TTTATTTATGGCATATGCCT+TGG + chr1.2:79842121-79842140 None:intergenic 30.0%
TTTCTTATAAATAGGACCAG+AGG + chr1.2:79843025-79843044 None:intergenic 30.0%
TTTGATTGGTATGCGTTATT+TGG - chr1.2:79840065-79840084 MS.gene060310:intron 30.0%
! AAAGAGACACCTTATCATTT+TGG + chr1.2:79842787-79842806 None:intergenic 30.0%
! ATACATTTTTCCACAAGGTA+GGG + chr1.2:79843740-79843759 None:intergenic 30.0%
! ATTTGCATTTTATGGACCAA+TGG - chr1.2:79841480-79841499 MS.gene060310:intron 30.0%
! CTCTTTTTCCATGTCTTTAT+TGG - chr1.2:79841596-79841615 MS.gene060310:intron 30.0%
! GATCCTGAATTTGCATTTTA+TGG - chr1.2:79841472-79841491 MS.gene060310:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG + chr1.2:79843489-79843508 None:intergenic 30.0%
! GTTACCAGACATATATTTTC+TGG - chr1.2:79841647-79841666 MS.gene060310:intron 30.0%
! TGATCACATGTCTGATTTTA+TGG - chr1.2:79840149-79840168 MS.gene060310:intron 30.0%
! TTTCTGAGAATTATATGTGG+TGG + chr1.2:79840093-79840112 None:intergenic 30.0%
! TTTGCATTTTATGGACCAAT+GGG - chr1.2:79841481-79841500 MS.gene060310:intron 30.0%
!! AACCTATTTATTTTTCCTGG+AGG + chr1.2:79844016-79844035 None:intergenic 30.0%
!! CCTTTTCTGAGAATTATATG+TGG + chr1.2:79840096-79840115 None:intergenic 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG + chr1.2:79843269-79843288 None:intergenic 30.0%
!! TAGATCTCTATCTCTAGTTT+TGG - chr1.2:79841698-79841717 MS.gene060310:intron 30.0%
!! TGATTTGCTTTGTTCTTGTT+TGG - chr1.2:79840386-79840405 MS.gene060310:intron 30.0%
!! TGGAACCTATTTATTTTTCC+TGG + chr1.2:79844019-79844038 None:intergenic 30.0%
!! TGTTTTGAGTACAGAGTAAT+GGG + chr1.2:79842200-79842219 None:intergenic 30.0%
!!! TCGTACATTGACTAGTTTTT+AGG - chr1.2:79842465-79842484 MS.gene060310:CDS 30.0%
AAAGTGCAGTGAATTTATGG+TGG + chr1.2:79842635-79842654 None:intergenic 35.0%
AAGCAGTCCTACATATCTTT+AGG - chr1.2:79841785-79841804 MS.gene060310:intron 35.0%
AAGTTTCTGAGTATAATCGC+TGG - chr1.2:79841185-79841204 MS.gene060310:CDS 35.0%
ACCAAGTAATCAAGTCCAAA+GGG - chr1.2:79843850-79843869 MS.gene060310:CDS 35.0%
ACCACCAGAAAATATATGTC+TGG + chr1.2:79841654-79841673 None:intergenic 35.0%
ACCATAAATTCACTGCACTT+TGG - chr1.2:79842634-79842653 MS.gene060310:intron 35.0%
ACTACTGTGTTCATATGCAT+TGG - chr1.2:79843343-79843362 MS.gene060310:intron 35.0%
AGAGAGAATCGTAGTATAAG+GGG + chr1.2:79842177-79842196 None:intergenic 35.0%
AGCCTCCAGGAAAAATAAAT+AGG - chr1.2:79844011-79844030 MS.gene060310:CDS 35.0%
AGGGTATGAAAAGGTGAAAA+GGG + chr1.2:79840246-79840265 None:intergenic 35.0%
CAAGCAAACGATAGAAAAGT+AGG - chr1.2:79841571-79841590 MS.gene060310:intron 35.0%
CAAGGATAACTTAAGACCAA+TGG + chr1.2:79841086-79841105 None:intergenic 35.0%
CCATAAATTCACTGCACTTT+GGG - chr1.2:79842635-79842654 MS.gene060310:intron 35.0%
CGGAAAAAAGTAGTTAGGAA+AGG + chr1.2:79842230-79842249 None:intergenic 35.0%
CTACCTTGTGGAAAAATGTA+TGG - chr1.2:79843739-79843758 MS.gene060310:CDS 35.0%
CTTGGGACCGAAAATTATAA+AGG - chr1.2:79843479-79843498 MS.gene060310:intron 35.0%
GAGAGAGAATCGTAGTATAA+GGG + chr1.2:79842178-79842197 None:intergenic 35.0%
GATCGTACTATGTCTTTGAT+TGG - chr1.2:79840051-79840070 MS.gene060310:intron 35.0%
GGATAACAAGGAACTAGTTA+TGG + chr1.2:79841934-79841953 None:intergenic 35.0%
GGTCCATAAAATGCAAATTC+AGG + chr1.2:79841478-79841497 None:intergenic 35.0%
GTACTTACAATTATGCCAGT+AGG - chr1.2:79840654-79840673 MS.gene060310:intron 35.0%
GTTTATTTGGGCATTAGAAG+GGG - chr1.2:79842982-79843001 MS.gene060310:intron 35.0%
TAGAGCGGAAAAAAGTAGTT+AGG + chr1.2:79842235-79842254 None:intergenic 35.0%
TAGATTTCAGGAACATGATC+AGG + chr1.2:79840024-79840043 None:intergenic 35.0%
TAGCCTAACACTAGTATCAA+TGG - chr1.2:79842342-79842361 MS.gene060310:intron 35.0%
TATAAAAAAACTCGGCATCC+GGG + chr1.2:79841000-79841019 None:intergenic 35.0%
TATAGAATCGCAAAGTTTGG+AGG + chr1.2:79842534-79842553 None:intergenic 35.0%
TATGGACAAAGATTAGGTCA+GGG + chr1.2:79844083-79844102 None:intergenic 35.0%
TCACTATAATTTACTCCCTC+CGG + chr1.2:79843661-79843680 None:intergenic 35.0%
TCAGGATTGTTATAGATTCC+TGG + chr1.2:79842696-79842715 None:intergenic 35.0%
TCCAAATATGAGAACTTGAG+AGG + chr1.2:79840867-79840886 None:intergenic 35.0%
TCCTCTCAAGTTCTCATATT+TGG - chr1.2:79840863-79840882 MS.gene060310:intron 35.0%
TGTACAAGTAGTTGAACATC+AGG + chr1.2:79842714-79842733 None:intergenic 35.0%
TTAAGACAATTGCAGACACT+TGG - chr1.2:79842601-79842620 MS.gene060310:intron 35.0%
TTACCATATGTTCGTTGCAT+AGG - chr1.2:79839925-79839944 MS.gene060310:intron 35.0%
TTATAGTGAGAGATTTAGGC+TGG - chr1.2:79843672-79843691 MS.gene060310:intron 35.0%
TTATGCAGGCATATAAGGAA+TGG - chr1.2:79842574-79842593 MS.gene060310:intron 35.0%
TTATGGACAAAGATTAGGTC+AGG + chr1.2:79844084-79844103 None:intergenic 35.0%
TTCTCATATTTGGATCCTCA+TGG - chr1.2:79840873-79840892 MS.gene060310:intron 35.0%
TTGTGTTATGCAGGCATATA+AGG - chr1.2:79842569-79842588 MS.gene060310:intron 35.0%
! AAGGGTATGAAAAGGTGAAA+AGG + chr1.2:79840247-79840266 None:intergenic 35.0%
! ACCAGACATATATTTTCTGG+TGG - chr1.2:79841650-79841669 MS.gene060310:intron 35.0%
! CAACCATACATTTTTCCACA+AGG + chr1.2:79843745-79843764 None:intergenic 35.0%
! CATACATTTTTCCACAAGGT+AGG + chr1.2:79843741-79843760 None:intergenic 35.0%
! CTCATGGTGCAAATTTTTGT+GGG - chr1.2:79840889-79840908 MS.gene060310:intron 35.0%
! TGACTCTGTAATGGAAACAT+TGG - chr1.2:79840334-79840353 MS.gene060310:intron 35.0%
! TTCATTTAGGTTCTGTGAGA+GGG - chr1.2:79841378-79841397 MS.gene060310:intron 35.0%
! TTTGATGACAAAAGAACCGT+TGG + chr1.2:79839810-79839829 None:intergenic 35.0%
!! AAGAGCGTATTTTGAGTCAT+TGG - chr1.2:79839972-79839991 MS.gene060310:intron 35.0%
!! CTTTGGGATGAGCATAAAAA+TGG - chr1.2:79842651-79842670 MS.gene060310:intron 35.0%
!! GTGTTTTGAGTACAGAGTAA+TGG + chr1.2:79842201-79842220 None:intergenic 35.0%
!! TACTTTGGTGGATTTGTACA+TGG - chr1.2:79841744-79841763 MS.gene060310:intron 35.0%
!! TATTTTCTGGTGGTTCTTTG+TGG - chr1.2:79841660-79841679 MS.gene060310:intron 35.0%
!!! GATTTTGGCTTTCTTTTCTC+AGG - chr1.2:79841534-79841553 MS.gene060310:intron 35.0%
!!! GTTTTTTTGAGCTTACCTAC+TGG + chr1.2:79840672-79840691 None:intergenic 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG - chr1.2:79843548-79843567 MS.gene060310:intron 35.0%
AAGAAAGCTTCTTCCATAGC+TGG + chr1.2:79842096-79842115 None:intergenic 40.0%
AAGGGTTCCTTCTCTGAATT+AGG + chr1.2:79841955-79841974 None:intergenic 40.0%
AATCGTAGTATAAGGGGTCA+AGG + chr1.2:79842171-79842190 None:intergenic 40.0%
AATGGGCCTCTACTAATGAA+CGG - chr1.2:79840942-79840961 MS.gene060310:intron 40.0%
AGAAAGCTTCTTCCATAGCT+GGG + chr1.2:79842095-79842114 None:intergenic 40.0%
AGAATGGGCCAATAAAGACA+TGG + chr1.2:79841607-79841626 None:intergenic 40.0%
ATCGTAGTATAAGGGGTCAA+GGG + chr1.2:79842170-79842189 None:intergenic 40.0%
ATTGCACCGTTCATTAGTAG+AGG + chr1.2:79840951-79840970 None:intergenic 40.0%
CAGATCAACATGCATACCAA+GGG + chr1.2:79841973-79841992 None:intergenic 40.0%
CCACAAAAATTTGCACCATG+AGG + chr1.2:79840891-79840910 None:intergenic 40.0%
CCAGAACAAAAGATGCGTAA+TGG + chr1.2:79843977-79843996 None:intergenic 40.0%
CCCAAAGTGCAGTGAATTTA+TGG + chr1.2:79842638-79842657 None:intergenic 40.0%
CTAATTTACGTTGAGTCCCA+AGG + chr1.2:79843321-79843340 None:intergenic 40.0%
CTCAGAAAAGGCTTGATTGT+TGG - chr1.2:79840105-79840124 MS.gene060310:intron 40.0%
CTGATACACAGGAGAATTGT+TGG - chr1.2:79844144-79844163 MS.gene060310:CDS 40.0%
GACCAAGTAATCAAGTCCAA+AGG - chr1.2:79843849-79843868 MS.gene060310:CDS 40.0%
GACTTATCCGTCAAAGAAGT+CGG - chr1.2:79839746-79839765 MS.gene060310:CDS 40.0%
GATGAGCATAAAAATGGTGC+TGG - chr1.2:79842657-79842676 MS.gene060310:intron 40.0%
GATTTGTACATGGAAGAAGC+TGG - chr1.2:79841754-79841773 MS.gene060310:intron 40.0%
GGAGAGAGAATCGTAGTATA+AGG + chr1.2:79842179-79842198 None:intergenic 40.0%
GGATAAGTCGGAGAAATTGT+TGG + chr1.2:79839735-79839754 None:intergenic 40.0%
GGGTTTCATTGCATTGTTGT+AGG - chr1.2:79839900-79839919 MS.gene060310:intron 40.0%
GTTATATTCACTAAGCCTCC+AGG - chr1.2:79843998-79844017 MS.gene060310:CDS 40.0%
TAAGTACTTGCGAGACTGTT+TGG + chr1.2:79840641-79840660 None:intergenic 40.0%
TAATTCAGAGAAGGAACCCT+TGG - chr1.2:79841954-79841973 MS.gene060310:intron 40.0%
TACGCTCTTTCTTTCGTCAT+TGG + chr1.2:79839961-79839980 None:intergenic 40.0%
TCTCCTATGCAACGAACATA+TGG + chr1.2:79839931-79839950 None:intergenic 40.0%
TTCAGCAACTGCATGAAACA+AGG + chr1.2:79841104-79841123 None:intergenic 40.0%
TTCATCGTTTCCAACACCAA+CGG - chr1.2:79839791-79839810 MS.gene060310:intron 40.0%
TTCGTTGCATAGGAGAATCA+TGG - chr1.2:79839935-79839954 MS.gene060310:intron 40.0%
TTTCATGACAGTCTCGGATT+TGG - chr1.2:79842756-79842775 MS.gene060310:CDS 40.0%
! ATCAGTGTTTTCTCGTTCAG+AGG + chr1.2:79839671-79839690 None:intergenic 40.0%
! ATGCAGTTGCTGAATTTTGC+GGG - chr1.2:79841110-79841129 MS.gene060310:intron 40.0%
! CATGCAGTTGCTGAATTTTG+CGG - chr1.2:79841109-79841128 MS.gene060310:intron 40.0%
! CCATTACGCATCTTTTGTTC+TGG - chr1.2:79843974-79843993 MS.gene060310:CDS 40.0%
! CCTCATGGTGCAAATTTTTG+TGG - chr1.2:79840888-79840907 MS.gene060310:intron 40.0%
! CGAATGGACTTGTGGAATTT+GGG - chr1.2:79842275-79842294 MS.gene060310:intron 40.0%
! CGGTTCTTTTGTCATCAAAC+AGG - chr1.2:79839811-79839830 MS.gene060310:intron 40.0%
! CGTGACACCTCAATCTTTTA+TGG + chr1.2:79844101-79844120 None:intergenic 40.0%
! GAATGGACTTGTGGAATTTG+GGG - chr1.2:79842276-79842295 MS.gene060310:intron 40.0%
! GACTTCTTTGACGGATAAGT+CGG + chr1.2:79839747-79839766 None:intergenic 40.0%
! GGAGAAATTGTTGGCGATTT+TGG + chr1.2:79839726-79839745 None:intergenic 40.0%
! GTTCATTTAGGTTCTGTGAG+AGG - chr1.2:79841377-79841396 MS.gene060310:intron 40.0%
! TCATTGGCGTTGAAAGAAGA+GGG - chr1.2:79839988-79840007 MS.gene060310:intron 40.0%
! TGGTGTTGAGTATCCTTTGT+TGG - chr1.2:79840125-79840144 MS.gene060310:intron 40.0%
! TTTGATATCGGAGCATTCCT+AGG - chr1.2:79841505-79841524 MS.gene060310:intron 40.0%
! TTTTTACATTGGCCCAAGTC+GGG - chr1.2:79843549-79843568 MS.gene060310:intron 40.0%
!! AGCTTGCTCTGGCTTTAAAT+GGG - chr1.2:79840925-79840944 MS.gene060310:intron 40.0%
!! CGATTTTGGATGAAAGTGCA+GGG + chr1.2:79839712-79839731 None:intergenic 40.0%
!! GGACCAATGGGTTTTGATAT+CGG - chr1.2:79841493-79841512 MS.gene060310:intron 40.0%
!! TCTACACACTGGTTCTGTTA+TGG - chr1.2:79841423-79841442 MS.gene060310:intron 40.0%
!! TTGGCTTTCTTTTCTCAGGA+TGG - chr1.2:79841538-79841557 MS.gene060310:intron 40.0%
!!! ACTACTTTTTTCCGCTCTAC+TGG - chr1.2:79842236-79842255 MS.gene060310:intron 40.0%
AATTACGTTGCAGCGAACCT+TGG - chr1.2:79843301-79843320 MS.gene060310:intron 45.0%
ACAAAGATTAGGTCAGGGCA+CGG + chr1.2:79844078-79844097 None:intergenic 45.0%
ACAAGGTAGGGTCGATTACA+TGG + chr1.2:79843728-79843747 None:intergenic 45.0%
ACACAGGAGAATTGTTGGTG+TGG - chr1.2:79844149-79844168 MS.gene060310:CDS 45.0%
ATACACGGAGATCTACACAC+TGG - chr1.2:79841412-79841431 MS.gene060310:intron 45.0%
ATGTAATCGACCCTACCTTG+TGG - chr1.2:79843727-79843746 MS.gene060310:intron 45.0%
ATTACGTTGCAGCGAACCTT+GGG - chr1.2:79843302-79843321 MS.gene060310:intron 45.0%
CCAGATCAACATGCATACCA+AGG + chr1.2:79841974-79841993 None:intergenic 45.0%
CCTTGGTATGCATGTTGATC+TGG - chr1.2:79841971-79841990 MS.gene060310:intron 45.0%
CGCTGCAACGTAATTCTAAG+AGG + chr1.2:79843296-79843315 None:intergenic 45.0%
CTATAGCTGACGCTGGTAAA+CGG - chr1.2:79844193-79844212 MS.gene060310:CDS 45.0%
CTTGAATCTATAGCTGACGC+TGG - chr1.2:79844186-79844205 MS.gene060310:CDS 45.0%
GACAAAAGAACCGTTGGTGT+TGG + chr1.2:79839804-79839823 None:intergenic 45.0%
GACATGTGATCAGCCAACAA+AGG + chr1.2:79840141-79840160 None:intergenic 45.0%
GCCCTTTGGACTTGATTACT+TGG + chr1.2:79843854-79843873 None:intergenic 45.0%
GCTCCGATATCAAAACCCAT+TGG + chr1.2:79841499-79841518 None:intergenic 45.0%
GTTCTACCACGGAGCATAAA+CGG - chr1.2:79840205-79840224 MS.gene060310:intron 45.0%
GTTCTCATGCTTTGTCTGCA+TGG - chr1.2:79841905-79841924 MS.gene060310:intron 45.0%
GTTTATGCTCCGTGGTAGAA+CGG + chr1.2:79840206-79840225 None:intergenic 45.0%
TATAGCTGACGCTGGTAAAC+GGG - chr1.2:79844194-79844213 MS.gene060310:CDS 45.0%
TCTGCTTTACCGTTCTACCA+CGG - chr1.2:79840194-79840213 MS.gene060310:intron 45.0%
TTCTACCACGGAGCATAAAC+GGG - chr1.2:79840206-79840225 MS.gene060310:intron 45.0%
TTGGCGCTGCCAAAATGATA+AGG - chr1.2:79842775-79842794 MS.gene060310:CDS 45.0%
! CTTGACACGAACAGGTGTTT+TGG + chr1.2:79844039-79844058 None:intergenic 45.0%
! GCGAATGGACTTGTGGAATT+TGG - chr1.2:79842274-79842293 MS.gene060310:intron 45.0%
! GTCATTGGCGTTGAAAGAAG+AGG - chr1.2:79839987-79840006 MS.gene060310:intron 45.0%
! TGCTGAATTTTGCGGGAATG+TGG - chr1.2:79841117-79841136 MS.gene060310:intron 45.0%
! TGTTCTTGTTTGGCCCTGTT+TGG - chr1.2:79840396-79840415 MS.gene060310:intron 45.0%
! TTTGGATGAAAGTGCAGGGA+TGG + chr1.2:79839708-79839727 None:intergenic 45.0%
!! AACATTGGTTCCTTGACGTG+TGG - chr1.2:79840349-79840368 MS.gene060310:intron 45.0%
!! CAATTGATCCCCGGATTAGT+AGG - chr1.2:79840967-79840986 MS.gene060310:intron 45.0%
!! GAGCTTGCTCTGGCTTTAAA+TGG - chr1.2:79840924-79840943 MS.gene060310:intron 45.0%
!! GCATAAAAATGGTGCTGGTG+AGG - chr1.2:79842662-79842681 MS.gene060310:intron 45.0%
!! GCGATTTTGGATGAAAGTGC+AGG + chr1.2:79839713-79839732 None:intergenic 45.0%
!!! ATAATAAGATAATATTTTTT+CGG + chr1.2:79843511-79843530 None:intergenic 5.0%
!!! TTTTTTCAATTTTTAATAAT+GGG - chr1.2:79839880-79839899 MS.gene060310:intron 5.0%
!!! TTTTTTTTTATAAAAAAACT+CGG + chr1.2:79841008-79841027 None:intergenic 5.0%
AAATTTGTCCGGTCCCGACT+TGG + chr1.2:79843565-79843584 None:intergenic 50.0%
AAGAGTAGAGCTCCCAGCTA+TGG - chr1.2:79842080-79842099 MS.gene060310:intron 50.0%
AAGCCAGAGCAAGCTCAGTA+TGG + chr1.2:79840920-79840939 None:intergenic 50.0%
AATTTGTCCGGTCCCGACTT+GGG + chr1.2:79843564-79843583 None:intergenic 50.0%
ACCGTGATGCTGAAGCTGTT+CGG - chr1.2:79841224-79841243 MS.gene060310:CDS 50.0%
AGCATCACGGTCAAGATGAG+GGG + chr1.2:79841215-79841234 None:intergenic 50.0%
AGGGCTCAGGCACTAATACA+CGG - chr1.2:79841397-79841416 MS.gene060310:intron 50.0%
CAGCATCACGGTCAAGATGA+GGG + chr1.2:79841216-79841235 None:intergenic 50.0%
CGATTGACAACCACACGTCA+AGG + chr1.2:79840362-79840381 None:intergenic 50.0%
CTGCTCAAACAAGAGCCCTT+TGG + chr1.2:79843868-79843887 None:intergenic 50.0%
CTTGAGAGGATCACACTCCA+AGG + chr1.2:79840853-79840872 None:intergenic 50.0%
GCCATCTCCGACTTCTTTGA+CGG + chr1.2:79839756-79839775 None:intergenic 50.0%
GGAAGAAGCTTTCTTGCCCA+AGG - chr1.2:79842101-79842120 MS.gene060310:intron 50.0%
GTAAACGGGCAACCTGTGAA+CGG - chr1.2:79844208-79844227 MS.gene060310:CDS 50.0%
TCAGCATCACGGTCAAGATG+AGG + chr1.2:79841217-79841236 None:intergenic 50.0%
TCCGTCAAAGAAGTCGGAGA+TGG - chr1.2:79839752-79839771 MS.gene060310:CDS 50.0%
TGAACGGTGCAATTGATCCC+CGG - chr1.2:79840958-79840977 MS.gene060310:intron 50.0%
TGTTGGTGTGGCACATGTTG+AGG - chr1.2:79844161-79844180 MS.gene060310:CDS 50.0%
TTCCACAAGTCCATTCGCAC+AGG + chr1.2:79842272-79842291 None:intergenic 50.0%
! AGTCCATACTGAGCTTGCTC+TGG - chr1.2:79840914-79840933 MS.gene060310:intron 50.0%
! CAAAGGGCTCTTGTTTGAGC+AGG - chr1.2:79843866-79843885 MS.gene060310:CDS 50.0%
!! GTGGTGTAGGCTTTAGACCT+TGG - chr1.2:79840833-79840852 MS.gene060310:intron 50.0%
ACCACGGAGCATAAACGGGA+CGG - chr1.2:79840210-79840229 MS.gene060310:intron 55.0%
CCCGAACAGCTTCAGCATCA+CGG + chr1.2:79841228-79841247 None:intergenic 55.0%
CCGTGATGCTGAAGCTGTTC+GGG - chr1.2:79841225-79841244 MS.gene060310:CDS 55.0%
CTGTGTTAGGCCTGTGCGAA+TGG - chr1.2:79842259-79842278 MS.gene060310:intron 55.0%
GCCAACGACCTACTAATCCG+GGG + chr1.2:79840978-79840997 None:intergenic 55.0%
GCCTAACACAGCCAGTAGAG+CGG + chr1.2:79842250-79842269 None:intergenic 55.0%
GCGGGAATGTGGAGTTATGC+AGG - chr1.2:79841128-79841147 MS.gene060310:intron 55.0%
GCTGGTGAGGCATATCTTCC+AGG - chr1.2:79842675-79842694 MS.gene060310:CDS 55.0%
GGCCAACGACCTACTAATCC+GGG + chr1.2:79840979-79840998 None:intergenic 55.0%
GGGCCAACGACCTACTAATC+CGG + chr1.2:79840980-79840999 None:intergenic 55.0%
GTTATGCAGGCTCACTGAGC+AGG - chr1.2:79841141-79841160 MS.gene060310:intron 55.0%
TAGGTTCTGTGAGAGGGCTC+AGG - chr1.2:79841384-79841403 MS.gene060310:intron 55.0%
TCAGGGCACGGTGATACTCT+GGG + chr1.2:79844066-79844085 None:intergenic 55.0%
! GGATTAGTAGGTCGTTGGCC+CGG - chr1.2:79840979-79840998 MS.gene060310:intron 55.0%
! GGTCTAAAGCCTACACCACC+AGG + chr1.2:79840832-79840851 None:intergenic 55.0%
! TCCGCTCTACTGGCTGTGTT+AGG - chr1.2:79842246-79842265 MS.gene060310:intron 55.0%
! TGGGTGGACTTGACACGAAC+AGG + chr1.2:79844047-79844066 None:intergenic 55.0%
!! ATAACCCACATGGGCTAGCC+TGG - chr1.2:79840811-79840830 MS.gene060310:intron 55.0%
!! TCCCCGGATTAGTAGGTCGT+TGG - chr1.2:79840974-79840993 MS.gene060310:intron 55.0%
AACGGGCAACCTGTGAACGG+CGG - chr1.2:79844211-79844230 MS.gene060310:CDS 60.0%
ACATTGGCCCAAGTCGGGAC+CGG - chr1.2:79843554-79843573 MS.gene060310:intron 60.0%
ACCGTCCCGTTTATGCTCCG+TGG + chr1.2:79840214-79840233 None:intergenic 60.0%
ATCAAGTGCCCGCCGTTCAC+AGG + chr1.2:79844223-79844242 None:intergenic 60.0%
GTCAGGGCACGGTGATACTC+TGG + chr1.2:79844067-79844086 None:intergenic 60.0%
! ACCACCAGGCTAGCCCATGT+GGG + chr1.2:79840818-79840837 None:intergenic 60.0%
! GGCCTGTGCGAATGGACTTG+TGG - chr1.2:79842267-79842286 MS.gene060310:intron 60.0%
!! ATGGGCTAGCCTGGTGGTGT+AGG - chr1.2:79840820-79840839 MS.gene060310:intron 60.0%
ACGGGCAACCTGTGAACGGC+GGG - chr1.2:79844212-79844231 MS.gene060310:CDS 65.0%
GGGCACGGTGATACTCTGGG+TGG + chr1.2:79844063-79844082 None:intergenic 65.0%
! CACCACCAGGCTAGCCCATG+TGG + chr1.2:79840819-79840838 None:intergenic 65.0%
!! ACCCACATGGGCTAGCCTGG+TGG - chr1.2:79840814-79840833 MS.gene060310:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 79839644 79844320 79839644 ID=MS.gene060310
chr1.2 mRNA 79839644 79844320 79839644 ID=MS.gene060310.t1;Parent=MS.gene060310
chr1.2 exon 79844132 79844320 79844132 ID=MS.gene060310.t1.exon1;Parent=MS.gene060310.t1
chr1.2 CDS 79844132 79844320 79844132 ID=cds.MS.gene060310.t1;Parent=MS.gene060310.t1
chr1.2 exon 79843733 79844042 79843733 ID=MS.gene060310.t1.exon2;Parent=MS.gene060310.t1
chr1.2 CDS 79843733 79844042 79843733 ID=cds.MS.gene060310.t1;Parent=MS.gene060310.t1
chr1.2 exon 79842674 79842848 79842674 ID=MS.gene060310.t1.exon3;Parent=MS.gene060310.t1
chr1.2 CDS 79842674 79842848 79842674 ID=cds.MS.gene060310.t1;Parent=MS.gene060310.t1
chr1.2 exon 79842376 79842577 79842376 ID=MS.gene060310.t1.exon4;Parent=MS.gene060310.t1
chr1.2 CDS 79842376 79842577 79842376 ID=cds.MS.gene060310.t1;Parent=MS.gene060310.t1
chr1.2 exon 79841168 79841382 79841168 ID=MS.gene060310.t1.exon5;Parent=MS.gene060310.t1
chr1.2 CDS 79841168 79841382 79841168 ID=cds.MS.gene060310.t1;Parent=MS.gene060310.t1
chr1.2 exon 79839644 79839809 79839644 ID=MS.gene060310.t1.exon6;Parent=MS.gene060310.t1
chr1.2 CDS 79839644 79839809 79839644 ID=cds.MS.gene060310.t1;Parent=MS.gene060310.t1
Gene Sequence

>MS.gene060310

ATGTCGAATTTCTCAGAGTTCAAACCTCTGAACGAGAAAACACTGATCGAGTACATAAAATCCATCCCTGCACTTTCATCCAAAATCGCCAACAATTTCTCCGACTTATCCGTCAAAGAAGTCGGAGATGGCAACCTTAATTTCGTCTTCATCGTTTCCAACACCAACGGTTCTTTTGTCATCAAACAGGTATCATCATCATACACAATCTTCCAAAAATGCACAAAATTTTGTTCTTTTTTCAATTTTTAATAATGGGTTTCATTGCATTGTTGTAGGCTTTACCATATGTTCGTTGCATAGGAGAATCATGGCCAATGACGAAAGAAAGAGCGTATTTTGAGTCATTGGCGTTGAAAGAAGAGGGTAAATTGAGTCCTGATCATGTTCCTGAAATCTATCATTTTGATCGTACTATGTCTTTGATTGGTATGCGTTATTTGGAGCCACCACATATAATTCTCAGAAAAGGCTTGATTGTTGGTGTTGAGTATCCTTTGTTGGCTGATCACATGTCTGATTTTATGGCTAATACACTCTTCTTTACTTCTCTGCTTTACCGTTCTACCACGGAGCATAAACGGGACGGTATGAATCTTCCCTTTTCACCTTTTCATACCCTTAACATATTTATTTGTTTGCAATTAAAAGTCTGTTACTCTTAGTCTATTTGTCTAATTCCCTTAAATTTGACTCTGTAATGGAAACATTGGTTCCTTGACGTGTGGTTGTCAATCGTCTGTGATTTGCTTTGTTCTTGTTTGGCCCTGTTTGGATAAACAACTTATTTCGCAGCTTATGTATAAGCTCCCTCTTTCTATAACAAAAGATAAAATCAAGTTAAGCTTTGTTACTAAGATATCTTCGAGAGTTAATGAGAATAAGCTGAAAAGAGCTTATGAACATGCAATAAGCTATTTTCAATAGTTCTCTCAAACAAAAATAAACTGAAAACAACTTATGAACATCTAATAAGCTATTTTCATAAGTTCTTCCAAACAGTCTCGCAAGTACTTACAATTATGCCAGTAGGTAAGCTCAAAAAAACAACCCCTTAGTAAATATTTGAGTCTTTGTTAGTCTTTTTCATTTGAAAATGGATGGAGTAAATGATGTCACCTTCTTATGCCTTATAGACAATTAATATTCTTAAACACATAGTAATATATAACCCACATGGGCTAGCCTGGTGGTGTAGGCTTTAGACCTTGGAGTGTGATCCTCTCAAGTTCTCATATTTGGATCCTCATGGTGCAAATTTTTGTGGGCTAGTCCATACTGAGCTTGCTCTGGCTTTAAATGGGCCTCTACTAATGAACGGTGCAATTGATCCCCGGATTAGTAGGTCGTTGGCCCGGATGCCGAGTTTTTTTATAAAAAAAAAAAAAAAAAAACATAATTATATTTATATTGATATTACCTTAAGACATGTTATGTTACCATTGGTCTTAAGTTATCCTTGTTTCATGCAGTTGCTGAATTTTGCGGGAATGTGGAGTTATGCAGGCTCACTGAGCAGGTTGTTTTCTCTGACCCATATAAAGTTTCTGAGTATAATCGCTGGACTTCCCCTCATCTTGACCGTGATGCTGAAGCTGTTCGGGAAGACAATCTACTGAAGCTTGAAGTTGCTGAGCTAAAATCAAAGTATTATATATGTCGCACACTCTATCTTTTTTTCTTCTTTTAATGCAGTAGTTTTGTTTTTTGAGTTTTTGTTGATGAAAATTTATGTTCATTTAGGTTCTGTGAGAGGGCTCAGGCACTAATACACGGAGATCTACACACTGGTTCTGTTATGGTTACTCGTGAATCAACTCAAGTTATTGATCCTGAATTTGCATTTTATGGACCAATGGGTTTTGATATCGGAGCATTCCTAGGAAATTTGATTTTGGCTTTCTTTTCTCAGGATGGACATGCTGATCAAGCAAACGATAGAAAAGTAGGTCCTCTTTTTCCATGTCTTTATTGGCCCATTCTTTTCATTCTATTCTGAATTTGTTACCAGACATATATTTTCTGGTGGTTCTTTGTGGTCTAACTTGCAAACTTAGATCTCTATCTCTAGTTTTGGTTAATATATTGAAGTTTTTATTTTACTTTGGTGGATTTGTACATGGAAGAAGCTGGTTATATTTAAGCAGTCCTACATATCTTTAGGATATCATGACATTAGTACTTGCAATTAAGTTTTTATTTTTTTTTTTTATTTTTTTTTTATCTTTGTTCTTATTTACAGTTTTGAATCAATTTGTATTGTTCTCATGCTTTGTCTGCATGGTGACCATAACTAGTTCCTTGTTATCCTAATTCAGAGAAGGAACCCTTGGTATGCATGTTGATCTGGTATCAGAGTCACACCATGTGAAAAATCTAATGCATAAGCCACAAACAAAGAATAGGAAATTTCAGAAAGGTAAATTACAGAAAATAAAGAGTAGAGCTCCCAGCTATGGAAGAAGCTTTCTTGCCCAAGGCATATGCCATAAATAAAGACGATATCATACTTCACATGAACAACCCTTGACCCCTTATACTACGATTCTCTCTCCCATTACTCTGTACTCAAAACACATTTTCCCTTTCCTAACTACTTTTTTCCGCTCTACTGGCTGTGTTAGGCCTGTGCGAATGGACTTGTGGAATTTGGGGTTGTATTTGTATACACATCTTTTTCAGATAATATTAGATTTCTTAGCCTAACACTAGTATCAATGGTTACATGATAGAGTAATTCTCATGGTTTCTCTTTGATGTCCAGCATATGATATTTTTTAGAGAATCAACATTCTGGATATGTAAAGTGATTAGACTGCTCTCGTACATTGACTAGTTTTTAGGAGTACTCTGTGTTTCAGTTTTTTCTTTGTTGAGGTTTTGTTATCCTCCAAACTTTGCGATTCTATATCTTTCTTTAACACATTGTGTTATGCAGGCATATAAGGAATGGATTCTTAAGACAATTGCAGACACTTGGAATCTTTTCCACCATAAATTCACTGCACTTTGGGATGAGCATAAAAATGGTGCTGGTGAGGCATATCTTCCAGGAATCTATAACAATCCTGATGTTCAACTACTTGTACAGAAGAAATACATGACAGATTTATTTCATGACAGTCTCGGATTTGGCGCTGCCAAAATGATAAGGTGTCTCTTTTTCTTAAATATATTTTTCCTCTTTTAATAAAAACAATAATATGAGGTTGCAGTAATCATTTTCACTTAAATGCTACAGAATGTCCATGTTTATGATTTATGGGTTAACAATACAATCATTAGAGAGATAAATGGAGTAGTTTCTATTGTCGAAAAGATGGTAAAGTCACATCTTAGTTTATTTGGGCATTAGAAGGGGAAAACTAAAAATTACTTCCTCTGGTCCTATTTATAAGAAAAAGTTAACTTTTTAGATTCATTGTATAATTAATGTATCTTGTCTAGAATATAAACCAAATATATCATTTATACAATGAATTAAAAAAGTCAAATACAGTTAAAACTCTATAAATTAATAATGTCAGGACCGGAGAAATTTATTAATTTAGAGAGTTATTAATTTATCGATAAATTAATAATTATTAATTTAAAGAGTTTTTAAGTAATTATACTGTACATACCAAACAAAAAGGCAAATTAGTCTATGCCTCTTAGAATTACGTTGCAGCGAACCTTGGGACTCAACGTAAATTAGTAACTACTGTGTTCATATGCATTGGAAATCAATAATGACTTTTGAAGTACAATAAATGTAAACAAGAGGAACAAATGTGTTCAATGTATTCTTAATATATTTTTTTTCAGTTTCTATGAATTATTAATTTATGATTTTCTTGGGACCGAAAATTATAAAGGGATCTCCCGAAAAAATATTATCTTATTATTTTATCGAGTTTTTCAATTTTTTACATTGGCCCAAGTCGGGACCGGACAAATTTATTATTTTAGAGAGTTTATTAATTTACCGAGTATTAAATTAAAGAGTTTCTACAGTATTTCTTATAAATAGGACCGGAGGGAGTAAATTATAGTGAGAGATTTAGGCTGGCATTGATAGTGTGTTATAGTGATATTTGATCCATGTAATCGACCCTACCTTGTGGAAAAATGTATGGTTGTTGTTTTAATATATATTCACGGTCTTGCAAACTAAGAGCTTAAACTTTTAAGATAATTGGTCATTTACACAGTACAGCTTTATTGACCAAGTAATCAAGTCCAAAGGGCTCTTGTTTGAGCAGGAATGTTAGATATAAAAAAAAAAAACAAAAAAAAAAACAGCGGATACCATTACGCTTATCTAAAATAAAATAAAAAACAGTGGATACCATTACGCATCTTTTGTTCTGGTGTTATATTCACTAAGCCTCCAGGAAAAATAAATAGGTTCCAAAACACCTGTTCGTGTCAAGTCCACCCAGAGTATCACCGTGCCCTGACCTAATCTTTGTCCATAAAAGATTGAGGTGTCACGACTAACTTTTCCATTTCAATTATCTGATACACAGGAGAATTGTTGGTGTGGCACATGTTGAGGATCTTGAATCTATAGCTGACGCTGGTAAACGGGCAACCTGTGAACGGCGGGCACTTGATTTAGCTAAGATGCTTCTCAAAGAAAGAAGAAAATTTGAGAGCATTTCTGAAATTGTCTCAGCAATTCAGCAATTTTAG

Protein sequence

>MS.gene060310.t1

MSNFSEFKPLNEKTLIEYIKSIPALSSKIANNFSDLSVKEVGDGNLNFVFIVSNTNGSFVIKQALPYVRCIGESWPMTKERAYFESLALKEEGKLSPDHVPEIYHFDRTMSLIGMRYLEPPHIILRKGLIVGVEYPLLADHMSDFMANTLFFTSLLYRSTTEHKRDVAEFCGNVELCRLTEQVVFSDPYKVSEYNRWTSPHLDRDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHTGSVMVTRESTQVIDPEFAFYGPMGFDIGAFLGNLILAFFSQDGHADQANDRKAYKEWILKTIADTWNLFHHKFTALWDEHKNGAGEAYLPGIYNNPDVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVAHVEDLESIADAGKRATCERRALDLAKMLLKERRKFESISEIVSAIQQF