Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99261.t1 | XP_003614114.1 | 95.4 | 583 | 22 | 2 | 1 | 583 | 1 | 578 | 8.50E-282 | 979.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99261.t1 | F4I0K2 | 61.1 | 597 | 193 | 9 | 1 | 577 | 1 | 578 | 1.9e-173 | 610.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99261.t1 | G7JY18 | 95.4 | 583 | 22 | 2 | 1 | 583 | 1 | 578 | 6.1e-282 | 979.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene99261 | 0.838542 | 2.70E-57 | -1.69E-46 |
| MS.gene050099 | MS.gene99261 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene99261 | 0.825464 | 4.62E-54 | -1.69E-46 |
| MS.gene052600 | MS.gene99261 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene052789 | MS.gene99261 | 0.833169 | 6.22E-56 | -1.69E-46 |
| MS.gene054701 | MS.gene99261 | 0.862526 | 4.76E-64 | -1.69E-46 |
| MS.gene054942 | MS.gene99261 | 0.836717 | 7.94E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene99261 | 0.810173 | 1.31E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene99261 | 0.804448 | 2.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99261.t1 | MTR_5g044990 | 94.511 | 583 | 27 | 2 | 1 | 583 | 1 | 578 | 0.0 | 1051 |
| MS.gene99261.t1 | MTR_4g019165 | 44.072 | 388 | 191 | 6 | 193 | 565 | 81 | 457 | 1.06e-110 | 339 |
| MS.gene99261.t1 | MTR_1g076850 | 31.034 | 348 | 201 | 5 | 214 | 558 | 7 | 318 | 4.30e-50 | 176 |
| MS.gene99261.t1 | MTR_2g098950 | 32.362 | 309 | 184 | 5 | 255 | 560 | 40 | 326 | 8.86e-49 | 172 |
| MS.gene99261.t1 | MTR_4g067310 | 30.925 | 346 | 200 | 6 | 215 | 557 | 15 | 324 | 9.23e-49 | 172 |
| MS.gene99261.t1 | MTR_1g101950 | 29.942 | 344 | 204 | 5 | 215 | 555 | 23 | 332 | 1.30e-47 | 170 |
| MS.gene99261.t1 | MTR_6g089480 | 31.250 | 304 | 186 | 5 | 255 | 555 | 20 | 303 | 2.64e-47 | 168 |
| MS.gene99261.t1 | MTR_6g089480 | 32.234 | 273 | 162 | 5 | 255 | 524 | 20 | 272 | 1.88e-44 | 159 |
| MS.gene99261.t1 | MTR_6g089480 | 32.222 | 270 | 160 | 5 | 255 | 521 | 20 | 269 | 8.24e-44 | 157 |
| MS.gene99261.t1 | MTR_5g079460 | 31.014 | 345 | 200 | 7 | 214 | 555 | 66 | 375 | 1.37e-43 | 160 |
| MS.gene99261.t1 | MTR_7g075860 | 28.080 | 349 | 212 | 8 | 214 | 557 | 40 | 354 | 7.75e-39 | 146 |
| MS.gene99261.t1 | MTR_1g057810 | 29.934 | 304 | 189 | 5 | 257 | 557 | 276 | 558 | 4.96e-38 | 148 |
| MS.gene99261.t1 | MTR_1g105150 | 28.289 | 304 | 180 | 6 | 257 | 557 | 276 | 544 | 8.88e-32 | 130 |
| MS.gene99261.t1 | MTR_1g069745 | 26.230 | 305 | 188 | 8 | 255 | 555 | 9 | 280 | 9.32e-30 | 119 |
| MS.gene99261.t1 | MTR_1g069490 | 26.000 | 300 | 197 | 6 | 262 | 555 | 113 | 393 | 4.07e-28 | 117 |
| MS.gene99261.t1 | MTR_1g054730 | 31.126 | 151 | 99 | 2 | 279 | 426 | 154 | 302 | 7.33e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99261.t1 | AT1G69200 | 57.956 | 597 | 212 | 11 | 1 | 577 | 1 | 578 | 0.0 | 652 |
| MS.gene99261.t1 | AT3G54090 | 42.857 | 399 | 212 | 5 | 182 | 565 | 69 | 466 | 3.15e-106 | 328 |
| MS.gene99261.t1 | AT5G51830 | 30.899 | 356 | 209 | 5 | 208 | 560 | 16 | 337 | 3.30e-51 | 179 |
| MS.gene99261.t1 | AT5G51830 | 30.899 | 356 | 209 | 5 | 208 | 560 | 16 | 337 | 3.30e-51 | 179 |
| MS.gene99261.t1 | AT2G31390 | 32.845 | 341 | 190 | 7 | 215 | 552 | 9 | 313 | 9.35e-50 | 175 |
| MS.gene99261.t1 | AT3G59480 | 30.447 | 358 | 210 | 7 | 206 | 560 | 1 | 322 | 5.81e-49 | 173 |
| MS.gene99261.t1 | AT4G10260 | 31.143 | 350 | 202 | 6 | 214 | 560 | 5 | 318 | 3.97e-48 | 171 |
| MS.gene99261.t1 | AT1G06030 | 30.792 | 341 | 197 | 6 | 215 | 552 | 11 | 315 | 4.52e-47 | 168 |
| MS.gene99261.t1 | AT1G66430 | 30.372 | 349 | 205 | 7 | 214 | 559 | 64 | 377 | 1.07e-46 | 169 |
| MS.gene99261.t1 | AT1G06020 | 31.894 | 301 | 180 | 5 | 255 | 552 | 36 | 314 | 1.37e-46 | 167 |
Find 132 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAGATTGCAAAGCATTT+TGG | 0.178739 | 5.4:+34737098 | MS.gene99261:CDS |
| CGGTCAGCATTGATAGTAAA+AGG | 0.213176 | 5.4:+34735768 | MS.gene99261:CDS |
| CCTCCTCTTGTTTGTTGCTT+TGG | 0.218528 | 5.4:+34735491 | MS.gene99261:CDS |
| CTCATCTATGTCACCGATTT+CGG | 0.231562 | 5.4:-34735375 | None:intergenic |
| TCACGAGTGAAAGGGGTAAT+TGG | 0.237851 | 5.4:-34737446 | None:intergenic |
| TCCTCTTTATTCTCCTCTTT+AGG | 0.276483 | 5.4:-34735317 | None:intergenic |
| TGCATCTAGTTCTGCTGCTT+TGG | 0.313717 | 5.4:+34735244 | MS.gene99261:CDS |
| GAGAAATTTGTTAGGGCTCC+TGG | 0.317093 | 5.4:+34735611 | MS.gene99261:CDS |
| GGAAGAAGAGAAAGAAGTTA+AGG | 0.324640 | 5.4:+34735265 | MS.gene99261:CDS |
| CCTTTATCAGTTATCAAATC+AGG | 0.336586 | 5.4:-34738025 | None:intergenic |
| CCTGATTTGATAACTGATAA+AGG | 0.337736 | 5.4:+34738025 | MS.gene99261:CDS |
| CACGAGTGAAAGGGGTAATT+GGG | 0.359391 | 5.4:-34737445 | None:intergenic |
| AAACTTGCAGATGATGAATA+TGG | 0.370202 | 5.4:+34735698 | MS.gene99261:CDS |
| TATCACCTGGTTCAACTAAC+TGG | 0.371257 | 5.4:-34738214 | None:intergenic |
| CACTGATGAAGATTGGTAAA+AGG | 0.375060 | 5.4:+34735804 | MS.gene99261:CDS |
| GGAGCCCTGAGAAATTTGTT+AGG | 0.379308 | 5.4:+34735603 | MS.gene99261:CDS |
| GACATTACTCCTGATCCTTA+TGG | 0.380425 | 5.4:+34738148 | MS.gene99261:CDS |
| CTTTCCTCCGCAGGAAGATA+TGG | 0.391445 | 5.4:+34738123 | MS.gene99261:CDS |
| TCTGGAGACGGCATTGTTGC+AGG | 0.393744 | 5.4:+34737479 | MS.gene99261:CDS |
| AGAAATTTGTTAGGGCTCCT+GGG | 0.394154 | 5.4:+34735612 | MS.gene99261:CDS |
| AACAAATCAATTGTCCCTTC+TGG | 0.394435 | 5.4:-34735035 | None:intergenic |
| AGAAGGGACAATTGATTTGT+TGG | 0.395531 | 5.4:+34735037 | MS.gene99261:CDS |
| TAAACCTTCCTATGCCACTA+TGG | 0.397175 | 5.4:+34737141 | MS.gene99261:CDS |
| CTCACTTTCTTCCACTTCCC+AGG | 0.409532 | 5.4:+34734516 | MS.gene99261:CDS |
| AGCTATCATGCGAATGTTGA+CGG | 0.413638 | 5.4:+34737997 | MS.gene99261:intron |
| GGAGCCCTAACAAATTTCTC+AGG | 0.414232 | 5.4:-34735608 | None:intergenic |
| ATCAATTATGCAATTGATTG+TGG | 0.426364 | 5.4:+34738064 | MS.gene99261:CDS |
| ACTATGGCACGAAAATCTTA+AGG | 0.427317 | 5.4:+34737340 | MS.gene99261:CDS |
| GATAGTGCTTCTATTGTAGA+AGG | 0.432468 | 5.4:+34735068 | MS.gene99261:CDS |
| GGATGAGACTGACGATGGTT+TGG | 0.435291 | 5.4:+34735421 | MS.gene99261:CDS |
| ACTCGTGACATGTCAGCATC+TGG | 0.448444 | 5.4:+34737461 | MS.gene99261:CDS |
| GTGAAGTAGTTGCACCACTA+TGG | 0.456163 | 5.4:+34737324 | MS.gene99261:CDS |
| CTTCAGGTAGGCCTGCCAAT+AGG | 0.463718 | 5.4:+34735537 | MS.gene99261:CDS |
| AGCTCGATGGTGCTGTTAGC+GGG | 0.465873 | 5.4:+34737411 | MS.gene99261:CDS |
| CTATGAATGTAGTTCAACTT+GGG | 0.465900 | 5.4:+34734832 | MS.gene99261:CDS |
| ACTATCAATGCTGACCGATC+GGG | 0.466215 | 5.4:-34735762 | None:intergenic |
| TCAATTATGCAATTGATTGT+GGG | 0.468316 | 5.4:+34738065 | MS.gene99261:CDS |
| TACTATCAATGCTGACCGAT+CGG | 0.468391 | 5.4:-34735763 | None:intergenic |
| GACTGACGATGGTTTGGATC+TGG | 0.473146 | 5.4:+34735427 | MS.gene99261:CDS |
| TTCATGATCTATAAGCCTAT+TGG | 0.479296 | 5.4:-34735552 | None:intergenic |
| TGTGGTGTAGTAATGTATCT+TGG | 0.479747 | 5.4:-34737387 | None:intergenic |
| GCCATTGCTCTTGCTAGTCT+AGG | 0.481898 | 5.4:+34735653 | MS.gene99261:CDS |
| TTGGTGTCAAATTCTTCAGA+TGG | 0.483845 | 5.4:-34737266 | None:intergenic |
| TCTATGAATGTAGTTCAACT+TGG | 0.484359 | 5.4:+34734831 | MS.gene99261:CDS |
| TGTCAAACAATCTTCAGCAC+AGG | 0.492667 | 5.4:-34735852 | None:intergenic |
| CAACTACTTCACGTTCGTAA+TGG | 0.493443 | 5.4:-34737313 | None:intergenic |
| GAGCCCTGAGAAATTTGTTA+GGG | 0.499725 | 5.4:+34735604 | MS.gene99261:CDS |
| GGTGGTGGTGAAGCCGAAAT+CGG | 0.500614 | 5.4:+34735362 | MS.gene99261:CDS |
| GGGCATCCTTCATGCTTTCG+TGG | 0.501611 | 5.4:-34735577 | None:intergenic |
| TAAGGCATCTAAACATAAGA+AGG | 0.507071 | 5.4:+34734971 | MS.gene99261:CDS |
| AGTACGTGGCTTTCCTCCGC+AGG | 0.509991 | 5.4:+34738114 | MS.gene99261:CDS |
| TATAAAGGGTACCTGGGAAG+TGG | 0.511209 | 5.4:-34734527 | None:intergenic |
| GGTGTCTCACTGATGAAGAT+TGG | 0.511624 | 5.4:+34735797 | MS.gene99261:CDS |
| ATTGATAGTAAAAGGGCTAC+AGG | 0.515434 | 5.4:+34735776 | MS.gene99261:CDS |
| CATAATTGATGCTATGCTCT+AGG | 0.515807 | 5.4:-34738051 | None:intergenic |
| GAATCATCATCAGAGGGAGA+TGG | 0.516551 | 5.4:-34735092 | None:intergenic |
| GGTGGAAAAGAAAGTAACTA+AGG | 0.517432 | 5.4:+34734953 | MS.gene99261:CDS |
| GAAATTTGTTAGGGCTCCTG+GGG | 0.518314 | 5.4:+34735613 | MS.gene99261:CDS |
| AAAGCATGAAGGATGCCCTC+TGG | 0.519622 | 5.4:+34735582 | MS.gene99261:CDS |
| TCTTCCTGAGAGTGCCATAG+TGG | 0.525516 | 5.4:-34737155 | None:intergenic |
| AATCATCATCAGAGGGAGAT+GGG | 0.526276 | 5.4:-34735091 | None:intergenic |
| GTCTTCCTTTATTGAAAATG+TGG | 0.526297 | 5.4:+34735397 | MS.gene99261:CDS |
| TATGCCACTATGGCACTCTC+AGG | 0.527107 | 5.4:+34737151 | MS.gene99261:CDS |
| CGATGGTGCTGTTAGCGGGA+TGG | 0.537947 | 5.4:+34737415 | MS.gene99261:CDS |
| ATTGTGGGGTAATAGATCAA+TGG | 0.539254 | 5.4:+34738080 | MS.gene99261:CDS |
| AATTGTCCCTTCTGGAGACT+CGG | 0.539534 | 5.4:-34735027 | None:intergenic |
| TCTTGCTAGTCTAGGTGGCA+AGG | 0.541756 | 5.4:+34735661 | MS.gene99261:CDS |
| TTCTTAGAATCATCATCAGA+GGG | 0.544165 | 5.4:-34735098 | None:intergenic |
| TGAGAGTGCCATAGTGGCAT+AGG | 0.545969 | 5.4:-34737149 | None:intergenic |
| TGGATCTCATGTGACGATCA+AGG | 0.546279 | 5.4:-34737061 | None:intergenic |
| GTAATAGATCAATGGATACT+TGG | 0.547151 | 5.4:+34738088 | MS.gene99261:CDS |
| AAATATTGACGTGTTGAAAG+AGG | 0.554016 | 5.4:+34735886 | MS.gene99261:CDS |
| GCTGACATGTCACGAGTGAA+AGG | 0.554856 | 5.4:-34737455 | None:intergenic |
| TTCCTTTATTGAAAATGTGG+AGG | 0.558662 | 5.4:+34735400 | MS.gene99261:CDS |
| CTGACATGTCACGAGTGAAA+GGG | 0.562056 | 5.4:-34737454 | None:intergenic |
| CTTCTTAGAATCATCATCAG+AGG | 0.566475 | 5.4:-34735099 | None:intergenic |
| GGTCAGCATTGATAGTAAAA+GGG | 0.566795 | 5.4:+34735769 | MS.gene99261:CDS |
| GAGCTCGATGGTGCTGTTAG+CGG | 0.567047 | 5.4:+34737410 | MS.gene99261:CDS |
| CAATTATGCAATTGATTGTG+GGG | 0.567540 | 5.4:+34738066 | MS.gene99261:CDS |
| AAGAGCAATGGCAACACTAC+CGG | 0.568293 | 5.4:-34735642 | None:intergenic |
| TAAATCTAGTCATGTTGCAA+TGG | 0.572727 | 5.4:+34734872 | MS.gene99261:CDS |
| ACCTAAAGAGGAGAATAAAG+AGG | 0.575238 | 5.4:+34735316 | MS.gene99261:CDS |
| AAGTGGAAGAAAGTGAGCAA+GGG | 0.575285 | 5.4:-34734510 | None:intergenic |
| TGTGCAGGTGTAACTTGACT+TGG | 0.580944 | 5.4:+34734793 | MS.gene99261:intron |
| CTAGTCATGTTGCAATGGCT+AGG | 0.582018 | 5.4:+34734877 | MS.gene99261:CDS |
| TGATCTATAAGCCTATTGGC+AGG | 0.586380 | 5.4:-34735548 | None:intergenic |
| GACATGTCAGCATCTGGAGA+CGG | 0.587386 | 5.4:+34737467 | MS.gene99261:CDS |
| TATGAATGTAGTTCAACTTG+GGG | 0.591302 | 5.4:+34734833 | MS.gene99261:CDS |
| GTCAAACAATCTTCAGCACA+GGG | 0.597382 | 5.4:-34735851 | None:intergenic |
| GCAAGGGAAAGAGACGACAT+TGG | 0.597761 | 5.4:-34734494 | None:intergenic |
| AAGAACTAGAGTTCCTATGC+GGG | 0.599516 | 5.4:+34737237 | MS.gene99261:CDS |
| CTTGATAGCTCGCAAAGTCG+TGG | 0.600293 | 5.4:-34737081 | None:intergenic |
| CCAAAGCAACAAACAAGAGG+AGG | 0.601556 | 5.4:-34735491 | None:intergenic |
| TCGAAAGCCGAGTCTCCAGA+AGG | 0.601773 | 5.4:+34735020 | MS.gene99261:CDS |
| TGGATACTTGGTCGAGTACG+TGG | 0.602249 | 5.4:+34738100 | MS.gene99261:CDS |
| ATCTAAACATAAGAAGGTGT+CGG | 0.603871 | 5.4:+34734977 | MS.gene99261:CDS |
| GCTAGGAAGAAAGCTTCACT+AGG | 0.607054 | 5.4:+34734894 | MS.gene99261:CDS |
| TCCTCCATATCTTCCTGCGG+AGG | 0.613949 | 5.4:-34738127 | None:intergenic |
| TCTCATGTGACGATCAAGGA+GGG | 0.616712 | 5.4:-34737057 | None:intergenic |
| TGAACTCCACGAAAGCATGA+AGG | 0.616864 | 5.4:+34735571 | MS.gene99261:CDS |
| ATTGCTCTTGCTAGTCTAGG+TGG | 0.617176 | 5.4:+34735656 | MS.gene99261:CDS |
| GAGGACATAAGTGATACTTA+CGG | 0.618077 | 5.4:+34735464 | MS.gene99261:CDS |
| AAGGCGAAGGAAACCTAAAG+AGG | 0.620452 | 5.4:+34735304 | MS.gene99261:CDS |
| TAGTGAAAATGAACCTGTGG+TGG | 0.621542 | 5.4:+34734935 | MS.gene99261:CDS |
| AAATTTCTCAGGGCTCCAGA+GGG | 0.621942 | 5.4:-34735597 | None:intergenic |
| CAAATTTCTCAGGGCTCCAG+AGG | 0.624526 | 5.4:-34735598 | None:intergenic |
| ACCTAGACTAGCAAGAGCAA+TGG | 0.625002 | 5.4:-34735654 | None:intergenic |
| CTATTGGCAGGCCTACCTGA+AGG | 0.625259 | 5.4:-34735536 | None:intergenic |
| AGACGTTCATTCAGCAAGTG+TGG | 0.625558 | 5.4:+34737183 | MS.gene99261:CDS |
| GAGCCCTAACAAATTTCTCA+GGG | 0.627364 | 5.4:-34735607 | None:intergenic |
| GAAGTGGAAGAAAGTGAGCA+AGG | 0.632203 | 5.4:-34734511 | None:intergenic |
| CGAAAGCCGAGTCTCCAGAA+GGG | 0.633282 | 5.4:+34735021 | MS.gene99261:CDS |
| GTAATGGACAAACTTTGACC+TGG | 0.633703 | 5.4:-34737297 | None:intergenic |
| GCTCCAAAGCAACAAACAAG+AGG | 0.633915 | 5.4:-34735494 | None:intergenic |
| AGTGCCATAGTGGCATAGGA+AGG | 0.633942 | 5.4:-34737145 | None:intergenic |
| TCCTCCGCAGGAAGATATGG+AGG | 0.644654 | 5.4:+34738126 | MS.gene99261:CDS |
| ACGAGTGAAAGGGGTAATTG+GGG | 0.647030 | 5.4:-34737444 | None:intergenic |
| CGATTACAGAAACAGAGTAT+CGG | 0.647080 | 5.4:+34738179 | MS.gene99261:CDS |
| ACATAAGTGATACTTACGGT+TGG | 0.647130 | 5.4:+34735468 | MS.gene99261:CDS |
| TGACATGTCACGAGTGAAAG+GGG | 0.649548 | 5.4:-34737453 | None:intergenic |
| TGGTGCTGTTAGCGGGATGG+AGG | 0.653175 | 5.4:+34737418 | MS.gene99261:CDS |
| AAATTTGTTAGGGCTCCTGG+GGG | 0.655673 | 5.4:+34735614 | MS.gene99261:CDS |
| AAATAATGTTCAAACCCGAT+CGG | 0.661932 | 5.4:+34735748 | MS.gene99261:CDS |
| TACTACACCACAGAGCTCGA+TGG | 0.665232 | 5.4:+34737398 | MS.gene99261:CDS |
| CAGATGGTGTTATCCCGCAT+AGG | 0.666123 | 5.4:-34737250 | None:intergenic |
| ATGAATGTAGTTCAACTTGG+GGG | 0.670230 | 5.4:+34734834 | MS.gene99261:CDS |
| GCCTAGTGAAAATGAACCTG+TGG | 0.674022 | 5.4:+34734932 | MS.gene99261:CDS |
| ATGTCCTCCATATCTTCCTG+CGG | 0.678164 | 5.4:-34738130 | None:intergenic |
| CAAGAACTAGAGTTCCTATG+CGG | 0.692513 | 5.4:+34737236 | MS.gene99261:CDS |
| AACAGCACCATCGAGCTCTG+TGG | 0.705418 | 5.4:-34737405 | None:intergenic |
| ATCTCATGTGACGATCAAGG+AGG | 0.724742 | 5.4:-34737058 | None:intergenic |
| GTGGAGGATGAGACTGACGA+TGG | 0.806142 | 5.4:+34735416 | MS.gene99261:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAGTAGTATTATAATA+AGG | + | chr5.4:34736318-34736337 | MS.gene99261:intron | 10.0% |
| !! | AATTAGTAGTATTATAATAA+GGG | + | chr5.4:34736319-34736338 | MS.gene99261:intron | 10.0% |
| !! | ATTTCATTAAAAATCAAAAT+TGG | - | chr5.4:34734597-34734616 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTTTAATGAAA+TGG | + | chr5.4:34734596-34734615 | MS.gene99261:intron | 10.0% |
| !!! | ATTTTGATTTTTAATGAAAT+GGG | + | chr5.4:34734597-34734616 | MS.gene99261:intron | 10.0% |
| !! | AAAATATAATTCTCCTATAA+AGG | + | chr5.4:34734649-34734668 | MS.gene99261:intron | 15.0% |
| !! | ATAGATTTCAAGAAAAAATA+GGG | - | chr5.4:34736696-34736715 | None:intergenic | 15.0% |
| !! | ATTAAAAAAGTAACCTTTAT+AGG | - | chr5.4:34734665-34734684 | None:intergenic | 15.0% |
| !! | ATTAGTAGTATTATAATAAG+GGG | + | chr5.4:34736320-34736339 | MS.gene99261:intron | 15.0% |
| !! | ATTTCTACATTATTTAACAA+GGG | - | chr5.4:34737568-34737587 | None:intergenic | 15.0% |
| !! | CACTTATATATTAAAAAAAC+AGG | + | chr5.4:34736195-34736214 | MS.gene99261:intron | 15.0% |
| !! | TTAAAAATCAAAATTGGATA+AGG | - | chr5.4:34734591-34734610 | None:intergenic | 15.0% |
| !!! | AATATAATTTTAGAGGATAA+AGG | + | chr5.4:34735341-34735360 | MS.gene99261:CDS | 15.0% |
| !!! | TTTTTAAGACTACATATAAA+GGG | - | chr5.4:34734544-34734563 | None:intergenic | 15.0% |
| !!! | TTTTTTAAGACTACATATAA+AGG | - | chr5.4:34734545-34734564 | None:intergenic | 15.0% |
| !! | AAGAATAATTTAACATGTGA+CGG | + | chr5.4:34737609-34737628 | MS.gene99261:intron | 20.0% |
| !! | AATCCATTTGAAAAACATAA+AGG | + | chr5.4:34737539-34737558 | MS.gene99261:intron | 20.0% |
| !! | AATTATTCTTCCTATAATAG+TGG | - | chr5.4:34737599-34737618 | None:intergenic | 20.0% |
| !! | ATCCATTTGAAAAACATAAA+GGG | + | chr5.4:34737540-34737559 | MS.gene99261:intron | 20.0% |
| !! | ATTATTCTTCCTATAATAGT+GGG | - | chr5.4:34737598-34737617 | None:intergenic | 20.0% |
| !! | GATAGATTTCAAGAAAAAAT+AGG | - | chr5.4:34736697-34736716 | None:intergenic | 20.0% |
| !! | GATTTCTACATTATTTAACA+AGG | - | chr5.4:34737569-34737588 | None:intergenic | 20.0% |
| !!! | ACATTTTAGAACGAAAAAAT+TGG | - | chr5.4:34736407-34736426 | None:intergenic | 20.0% |
| !!! | ATTTTTGCTATCTTATTTTC+CGG | + | chr5.4:34737690-34737709 | MS.gene99261:intron | 20.0% |
| !!! | TCTAAAATGTGCTTATAATT+CGG | + | chr5.4:34736417-34736436 | MS.gene99261:intron | 20.0% |
| !!! | TTTATGTTTTTCAAATGGAT+TGG | - | chr5.4:34737540-34737559 | None:intergenic | 20.0% |
| !!! | TTTTTTGAAGAGAACATATA+AGG | + | chr5.4:34736871-34736890 | MS.gene99261:intron | 20.0% |
| ! | AAACCAAAAAGTAATGTTGT+TGG | + | chr5.4:34736794-34736813 | MS.gene99261:intron | 25.0% |
| ! | ATATAAGTGAAAATGACGAA+AGG | - | chr5.4:34736184-34736203 | None:intergenic | 25.0% |
| ! | ATCAATTATGCAATTGATTG+TGG | + | chr5.4:34738064-34738083 | MS.gene99261:CDS | 25.0% |
| ! | CAAATGATTATTGTGTGAAA+GGG | - | chr5.4:34736636-34736655 | None:intergenic | 25.0% |
| ! | CTAAAATGTGCTTATAATTC+GGG | + | chr5.4:34736418-34736437 | MS.gene99261:intron | 25.0% |
| ! | CTTTCACACAATAATCATTT+GGG | + | chr5.4:34736635-34736654 | MS.gene99261:intron | 25.0% |
| ! | GTAATAGTCATACACAAAAA+TGG | - | chr5.4:34736238-34736257 | None:intergenic | 25.0% |
| ! | TATAAGTGAAAATGACGAAA+GGG | - | chr5.4:34736183-34736202 | None:intergenic | 25.0% |
| ! | TATGCATGTTTGAACTAATA+TGG | - | chr5.4:34736496-34736515 | None:intergenic | 25.0% |
| ! | TCAATTATGCAATTGATTGT+GGG | + | chr5.4:34738065-34738084 | MS.gene99261:CDS | 25.0% |
| ! | TGCTTAACAGTTAACATATA+AGG | + | chr5.4:34736840-34736859 | MS.gene99261:intron | 25.0% |
| !! | AACATGAATGATTTTGTAGA+TGG | + | chr5.4:34736536-34736555 | MS.gene99261:intron | 25.0% |
| !! | AGAGGAGAATATAATTTTAG+AGG | + | chr5.4:34735334-34735353 | MS.gene99261:CDS | 25.0% |
| !! | GTATCTAGTAATTTGAAATG+CGG | + | chr5.4:34736367-34736386 | MS.gene99261:intron | 25.0% |
| !! | TTCACTAAATAGCTTAGTTT+TGG | - | chr5.4:34736587-34736606 | None:intergenic | 25.0% |
| !! | TTTCCTTTCATAGTGATTTT+AGG | + | chr5.4:34737782-34737801 | MS.gene99261:intron | 25.0% |
| !!! | ATAATTTTAGAGGATAAAGG+TGG | + | chr5.4:34735344-34735363 | MS.gene99261:CDS | 25.0% |
| !!! | CAACATTACTTTTTGGTTTA+TGG | - | chr5.4:34736793-34736812 | None:intergenic | 25.0% |
| !!! | CATCAATTTCAAGTTCAATA+AGG | - | chr5.4:34736013-34736032 | None:intergenic | 25.0% |
| !!! | TCACTAAATAGCTTAGTTTT+GGG | - | chr5.4:34736586-34736605 | None:intergenic | 25.0% |
| !!! | TTCCCTTTATGTTTTTCAAA+TGG | - | chr5.4:34737545-34737564 | None:intergenic | 25.0% |
| AAACTTGCAGATGATGAATA+TGG | + | chr5.4:34735698-34735717 | MS.gene99261:CDS | 30.0% | |
| AAATAATGTTCAAACCCGAT+CGG | + | chr5.4:34735748-34735767 | MS.gene99261:CDS | 30.0% | |
| AAATATTGACGTGTTGAAAG+AGG | + | chr5.4:34735886-34735905 | MS.gene99261:CDS | 30.0% | |
| AACGATATTGTCTATTGCAA+TGG | + | chr5.4:34736456-34736475 | MS.gene99261:intron | 30.0% | |
| AGACAATATCACGATTGAAT+CGG | + | chr5.4:34737805-34737824 | MS.gene99261:intron | 30.0% | |
| AGGAAGTGAAAAAAGTTACA+AGG | + | chr5.4:34735285-34735304 | MS.gene99261:CDS | 30.0% | |
| ATAAGTGAAAATGACGAAAG+GGG | - | chr5.4:34736182-34736201 | None:intergenic | 30.0% | |
| ATCTTGAGAGATGAAAAATC+AGG | - | chr5.4:34736294-34736313 | None:intergenic | 30.0% | |
| CAATTATGCAATTGATTGTG+GGG | + | chr5.4:34738066-34738085 | MS.gene99261:CDS | 30.0% | |
| CCAAATGATTATTGTGTGAA+AGG | - | chr5.4:34736637-34736656 | None:intergenic | 30.0% | |
| CCTTTATCAGTTATCAAATC+AGG | - | chr5.4:34738028-34738047 | None:intergenic | 30.0% | |
| CCTTTCACACAATAATCATT+TGG | + | chr5.4:34736634-34736653 | MS.gene99261:intron | 30.0% | |
| CTATCATTTGTTTAGAAACG+TGG | + | chr5.4:34736712-34736731 | MS.gene99261:intron | 30.0% | |
| CTATGAATGTAGTTCAACTT+GGG | + | chr5.4:34734832-34734851 | MS.gene99261:CDS | 30.0% | |
| GTAATAGATCAATGGATACT+TGG | + | chr5.4:34738088-34738107 | MS.gene99261:CDS | 30.0% | |
| GTCTTCCTTTATTGAAAATG+TGG | + | chr5.4:34735397-34735416 | MS.gene99261:CDS | 30.0% | |
| GTGTTAGTTAAACGTTGATA+TGG | + | chr5.4:34735213-34735232 | MS.gene99261:intron | 30.0% | |
| TAAATCTAGTCATGTTGCAA+TGG | + | chr5.4:34734872-34734891 | MS.gene99261:CDS | 30.0% | |
| TATGAATGTAGTTCAACTTG+GGG | + | chr5.4:34734833-34734852 | MS.gene99261:CDS | 30.0% | |
| TCTATGAATGTAGTTCAACT+TGG | + | chr5.4:34734831-34734850 | MS.gene99261:CDS | 30.0% | |
| TCTCCTAAAATCACTATGAA+AGG | - | chr5.4:34737788-34737807 | None:intergenic | 30.0% | |
| TCTTGAGAGATGAAAAATCA+GGG | - | chr5.4:34736293-34736312 | None:intergenic | 30.0% | |
| TTCATGATCTATAAGCCTAT+TGG | - | chr5.4:34735555-34735574 | None:intergenic | 30.0% | |
| TTCCTTTATTGAAAATGTGG+AGG | + | chr5.4:34735400-34735419 | MS.gene99261:CDS | 30.0% | |
| TTCTTAGAATCATCATCAGA+GGG | - | chr5.4:34735101-34735120 | None:intergenic | 30.0% | |
| TTGATTGTATGTCAGATTCT+CGG | + | chr5.4:34736903-34736922 | MS.gene99261:intron | 30.0% | |
| TTGGATCTGGAAAAATATGA+TGG | + | chr5.4:34735440-34735459 | MS.gene99261:CDS | 30.0% | |
| ! | ATCCTCCACATTTTCAATAA+AGG | - | chr5.4:34735405-34735424 | None:intergenic | 30.0% |
| ! | ATCTAAACATAAGAAGGTGT+CGG | + | chr5.4:34734977-34734996 | MS.gene99261:CDS | 30.0% |
| ! | CCTGATTTGATAACTGATAA+AGG | + | chr5.4:34738025-34738044 | MS.gene99261:CDS | 30.0% |
| ! | TAAGGCATCTAAACATAAGA+AGG | + | chr5.4:34734971-34734990 | MS.gene99261:CDS | 30.0% |
| ! | TCAATTTTGCAGTGTATGTT+GGG | + | chr5.4:34734685-34734704 | MS.gene99261:intron | 30.0% |
| ! | TTCAATTTTGCAGTGTATGT+TGG | + | chr5.4:34734684-34734703 | MS.gene99261:intron | 30.0% |
| ! | TTGTTAGAATGATGACGAAA+GGG | - | chr5.4:34736096-34736115 | None:intergenic | 30.0% |
| ! | TTTGTTAGAATGATGACGAA+AGG | - | chr5.4:34736097-34736116 | None:intergenic | 30.0% |
| !! | ATCAAGATTGCAAAGCATTT+TGG | + | chr5.4:34737098-34737117 | MS.gene99261:CDS | 30.0% |
| !! | CAACCAACAACATTACTTTT+TGG | - | chr5.4:34736800-34736819 | None:intergenic | 30.0% |
| !! | GTAATCGATTTTATGCCATA+AGG | - | chr5.4:34738166-34738185 | None:intergenic | 30.0% |
| !!! | AAGGTTTTGTTTGTGACTAA+TGG | + | chr5.4:34737359-34737378 | MS.gene99261:CDS | 30.0% |
| AACAAATCAATTGTCCCTTC+TGG | - | chr5.4:34735038-34735057 | None:intergenic | 35.0% | |
| AACACGAAAGACTCGAAAAA+AGG | + | chr5.4:34735124-34735143 | MS.gene99261:CDS | 35.0% | |
| ACACGAAAGACTCGAAAAAA+GGG | + | chr5.4:34735125-34735144 | MS.gene99261:CDS | 35.0% | |
| ACATAAGTGATACTTACGGT+TGG | + | chr5.4:34735468-34735487 | MS.gene99261:CDS | 35.0% | |
| ACCTAAAGAGGAGAATAAAG+AGG | + | chr5.4:34735316-34735335 | MS.gene99261:CDS | 35.0% | |
| ACTATGGCACGAAAATCTTA+AGG | + | chr5.4:34737340-34737359 | MS.gene99261:CDS | 35.0% | |
| ATATGTTCTAGCCTCATCAT+TGG | + | chr5.4:34735976-34735995 | MS.gene99261:intron | 35.0% | |
| ATCATGTCTCCCACTATTAT+AGG | + | chr5.4:34737586-34737605 | MS.gene99261:intron | 35.0% | |
| ATGAATGTAGTTCAACTTGG+GGG | + | chr5.4:34734834-34734853 | MS.gene99261:CDS | 35.0% | |
| ATTAAGAACACATCTCATGC+AGG | + | chr5.4:34737007-34737026 | MS.gene99261:intron | 35.0% | |
| ATTGTGGGGTAATAGATCAA+TGG | + | chr5.4:34738080-34738099 | MS.gene99261:CDS | 35.0% | |
| CACTGATGAAGATTGGTAAA+AGG | + | chr5.4:34735804-34735823 | MS.gene99261:CDS | 35.0% | |
| CATAATTGATGCTATGCTCT+AGG | - | chr5.4:34738054-34738073 | None:intergenic | 35.0% | |
| CGATTACAGAAACAGAGTAT+CGG | + | chr5.4:34738179-34738198 | MS.gene99261:CDS | 35.0% | |
| CTTCTTAGAATCATCATCAG+AGG | - | chr5.4:34735102-34735121 | None:intergenic | 35.0% | |
| CTTTGTTGCATTGCTTCAAA+AGG | - | chr5.4:34737642-34737661 | None:intergenic | 35.0% | |
| GAGGACATAAGTGATACTTA+CGG | + | chr5.4:34735464-34735483 | MS.gene99261:CDS | 35.0% | |
| GATAGTGCTTCTATTGTAGA+AGG | + | chr5.4:34735068-34735087 | MS.gene99261:CDS | 35.0% | |
| GCTTAATGAATGCCATATCA+AGG | + | chr5.4:34737827-34737846 | MS.gene99261:intron | 35.0% | |
| GGAAGAAGAGAAAGAAGTTA+AGG | + | chr5.4:34735265-34735284 | MS.gene99261:CDS | 35.0% | |
| GGTGGAAAAGAAAGTAACTA+AGG | + | chr5.4:34734953-34734972 | MS.gene99261:CDS | 35.0% | |
| TCAGTGTATAATTCTTGTGC+TGG | + | chr5.4:34734734-34734753 | MS.gene99261:intron | 35.0% | |
| TCCTCTTTATTCTCCTCTTT+AGG | - | chr5.4:34735320-34735339 | None:intergenic | 35.0% | |
| TCTTTGTTCTGTCAATAGTC+AGG | - | chr5.4:34736661-34736680 | None:intergenic | 35.0% | |
| TGAAAAAAGTTACAAGGCGA+AGG | + | chr5.4:34735291-34735310 | MS.gene99261:CDS | 35.0% | |
| TGTGGTGTAGTAATGTATCT+TGG | - | chr5.4:34737390-34737409 | None:intergenic | 35.0% | |
| ! | ATTGATAGTAAAAGGGCTAC+AGG | + | chr5.4:34735776-34735795 | MS.gene99261:CDS | 35.0% |
| ! | GATTTTATGCCATAAGGATC+AGG | - | chr5.4:34738160-34738179 | None:intergenic | 35.0% |
| ! | TCTGGAAAAATATGATGGAG+AGG | + | chr5.4:34735445-34735464 | MS.gene99261:CDS | 35.0% |
| ! | TTAAGATTTTCGTGCCATAG+TGG | - | chr5.4:34737341-34737360 | None:intergenic | 35.0% |
| ! | TTTGAAATGCGGCTTATGTT+TGG | + | chr5.4:34736378-34736397 | MS.gene99261:intron | 35.0% |
| !! | ACTACATATAAAGGGTACCT+GGG | - | chr5.4:34734536-34734555 | None:intergenic | 35.0% |
| !! | AGAAGGGACAATTGATTTGT+TGG | + | chr5.4:34735037-34735056 | MS.gene99261:CDS | 35.0% |
| !! | ATTTTAGAGGATAAAGGTGG+TGG | + | chr5.4:34735347-34735366 | MS.gene99261:CDS | 35.0% |
| !! | GGTCAGCATTGATAGTAAAA+GGG | + | chr5.4:34735769-34735788 | MS.gene99261:CDS | 35.0% |
| !! | TGAAACATCTCTCTAAAGCT+AGG | + | chr5.4:34737943-34737962 | MS.gene99261:intron | 35.0% |
| !! | TTGGTGTCAAATTCTTCAGA+TGG | - | chr5.4:34737269-34737288 | None:intergenic | 35.0% |
| !!! | CTGTTTTGTTTTAGCTGCTT+GGG | + | chr5.4:34736952-34736971 | MS.gene99261:intron | 35.0% |
| !!! | TAGCTTAGTTTTGGGATAGT+TGG | - | chr5.4:34736578-34736597 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGTTTTAGCTGCT+TGG | + | chr5.4:34736951-34736970 | MS.gene99261:intron | 35.0% |
| AAGAACTAGAGTTCCTATGC+GGG | + | chr5.4:34737237-34737256 | MS.gene99261:CDS | 40.0% | |
| AAGTGGAAGAAAGTGAGCAA+GGG | - | chr5.4:34734513-34734532 | None:intergenic | 40.0% | |
| AATCAGCGATTGGACTTTGT+TGG | + | chr5.4:34737715-34737734 | MS.gene99261:intron | 40.0% | |
| AATCATCATCAGAGGGAGAT+GGG | - | chr5.4:34735094-34735113 | None:intergenic | 40.0% | |
| AGCTATCATGCGAATGTTGA+CGG | + | chr5.4:34737997-34738016 | MS.gene99261:intron | 40.0% | |
| CAACTACTTCACGTTCGTAA+TGG | - | chr5.4:34737316-34737335 | None:intergenic | 40.0% | |
| CAACTTGGACATAGAAGCTT+TGG | + | chr5.4:34736760-34736779 | MS.gene99261:intron | 40.0% | |
| CAAGAACTAGAGTTCCTATG+CGG | + | chr5.4:34737236-34737255 | MS.gene99261:CDS | 40.0% | |
| CTGCTATATCACCAATGATG+AGG | - | chr5.4:34735990-34736009 | None:intergenic | 40.0% | |
| GACAATAAGGATTGAACCCT+AGG | + | chr5.4:34736736-34736755 | MS.gene99261:intron | 40.0% | |
| GACATTACTCCTGATCCTTA+TGG | + | chr5.4:34738148-34738167 | MS.gene99261:CDS | 40.0% | |
| GAGCCCTAACAAATTTCTCA+GGG | - | chr5.4:34735610-34735629 | None:intergenic | 40.0% | |
| GTCAAACAATCTTCAGCACA+GGG | - | chr5.4:34735854-34735873 | None:intergenic | 40.0% | |
| TAAACCTTCCTATGCCACTA+TGG | + | chr5.4:34737141-34737160 | MS.gene99261:CDS | 40.0% | |
| TACTATCAATGCTGACCGAT+CGG | - | chr5.4:34735766-34735785 | None:intergenic | 40.0% | |
| TAGTGAAAATGAACCTGTGG+TGG | + | chr5.4:34734935-34734954 | MS.gene99261:CDS | 40.0% | |
| TAGTTCTTGTGCAATTGTGC+AGG | + | chr5.4:34734778-34734797 | MS.gene99261:intron | 40.0% | |
| TCTATGTCCAAGTTGTCCTA+GGG | - | chr5.4:34736755-34736774 | None:intergenic | 40.0% | |
| TGATCTATAAGCCTATTGGC+AGG | - | chr5.4:34735551-34735570 | None:intergenic | 40.0% | |
| TGTCAAACAATCTTCAGCAC+AGG | - | chr5.4:34735855-34735874 | None:intergenic | 40.0% | |
| TTAGAAACGTGGCGACAATA+AGG | + | chr5.4:34736723-34736742 | MS.gene99261:intron | 40.0% | |
| TTCTATGTCCAAGTTGTCCT+AGG | - | chr5.4:34736756-34736775 | None:intergenic | 40.0% | |
| TTGACACCAAAAACAATGCC+AGG | + | chr5.4:34737279-34737298 | MS.gene99261:CDS | 40.0% | |
| TTGACGTGTTGAAAGAGGTA+CGG | + | chr5.4:34735891-34735910 | MS.gene99261:intron | 40.0% | |
| ! | ACCACAGGTTCATTTTCACT+AGG | - | chr5.4:34734936-34734955 | None:intergenic | 40.0% |
| ! | CTTTGACCTGGCATTGTTTT+TGG | - | chr5.4:34737288-34737307 | None:intergenic | 40.0% |
| ! | TTTTCCGGAAAATCAGCGAT+TGG | + | chr5.4:34737705-34737724 | MS.gene99261:intron | 40.0% |
| !! | AGAAATTTGTTAGGGCTCCT+GGG | + | chr5.4:34735612-34735631 | MS.gene99261:CDS | 40.0% |
| !! | CGGTCAGCATTGATAGTAAA+AGG | + | chr5.4:34735768-34735787 | MS.gene99261:CDS | 40.0% |
| !! | CTCATCTATGTCACCGATTT+CGG | - | chr5.4:34735378-34735397 | None:intergenic | 40.0% |
| !! | GACTACATATAAAGGGTACC+TGG | - | chr5.4:34734537-34734556 | None:intergenic | 40.0% |
| !! | GAGCCCTGAGAAATTTGTTA+GGG | + | chr5.4:34735604-34735623 | MS.gene99261:CDS | 40.0% |
| !! | GATTGCAAAGCATTTTGGAG+CGG | + | chr5.4:34737103-34737122 | MS.gene99261:CDS | 40.0% |
| !! | GTAATGGACAAACTTTGACC+TGG | - | chr5.4:34737300-34737319 | None:intergenic | 40.0% |
| !! | GTTACTTTCTTTTCCACCAC+AGG | - | chr5.4:34734951-34734970 | None:intergenic | 40.0% |
| !!! | AAGTCCAATCGCTGATTTTC+CGG | - | chr5.4:34737712-34737731 | None:intergenic | 40.0% |
| AAATTTCTCAGGGCTCCAGA+GGG | - | chr5.4:34735600-34735619 | None:intergenic | 45.0% | |
| AAGAGCAATGGCAACACTAC+CGG | - | chr5.4:34735645-34735664 | None:intergenic | 45.0% | |
| AAGGCGAAGGAAACCTAAAG+AGG | + | chr5.4:34735304-34735323 | MS.gene99261:CDS | 45.0% | |
| ACCTAGACTAGCAAGAGCAA+TGG | - | chr5.4:34735657-34735676 | None:intergenic | 45.0% | |
| ACGAGTGAAAGGGGTAATTG+GGG | - | chr5.4:34737447-34737466 | None:intergenic | 45.0% | |
| ACTATCAATGCTGACCGATC+GGG | - | chr5.4:34735765-34735784 | None:intergenic | 45.0% | |
| AGACGTTCATTCAGCAAGTG+TGG | + | chr5.4:34737183-34737202 | MS.gene99261:CDS | 45.0% | |
| ATATCAAGGAGCCAACACTC+GGG | + | chr5.4:34737841-34737860 | MS.gene99261:intron | 45.0% | |
| ATCTCATGTGACGATCAAGG+AGG | - | chr5.4:34737061-34737080 | None:intergenic | 45.0% | |
| ATGTCCTCCATATCTTCCTG+CGG | - | chr5.4:34738133-34738152 | None:intergenic | 45.0% | |
| CACGAGTGAAAGGGGTAATT+GGG | - | chr5.4:34737448-34737467 | None:intergenic | 45.0% | |
| CATATCAAGGAGCCAACACT+CGG | + | chr5.4:34737840-34737859 | MS.gene99261:intron | 45.0% | |
| CCAAAGCAACAAACAAGAGG+AGG | - | chr5.4:34735494-34735513 | None:intergenic | 45.0% | |
| CGAAAGGGCTTACAAATACG+AGG | - | chr5.4:34736081-34736100 | None:intergenic | 45.0% | |
| CTAGTCATGTTGCAATGGCT+AGG | + | chr5.4:34734877-34734896 | MS.gene99261:CDS | 45.0% | |
| CTGACATGTCACGAGTGAAA+GGG | - | chr5.4:34737457-34737476 | None:intergenic | 45.0% | |
| GAAGTGGAAGAAAGTGAGCA+AGG | - | chr5.4:34734514-34734533 | None:intergenic | 45.0% | |
| GAATCATCATCAGAGGGAGA+TGG | - | chr5.4:34735095-34735114 | None:intergenic | 45.0% | |
| GATTGAACCCTAGGACAACT+TGG | + | chr5.4:34736745-34736764 | MS.gene99261:intron | 45.0% | |
| GCCTAGTGAAAATGAACCTG+TGG | + | chr5.4:34734932-34734951 | MS.gene99261:CDS | 45.0% | |
| GCTAGGAAGAAAGCTTCACT+AGG | + | chr5.4:34734894-34734913 | MS.gene99261:CDS | 45.0% | |
| GCTCCAAAGCAACAAACAAG+AGG | - | chr5.4:34735497-34735516 | None:intergenic | 45.0% | |
| GGAGCCCTAACAAATTTCTC+AGG | - | chr5.4:34735611-34735630 | None:intergenic | 45.0% | |
| GGGCTTATGAATAGAGACAG+AGG | - | chr5.4:34736162-34736181 | None:intergenic | 45.0% | |
| GGTGTCTCACTGATGAAGAT+TGG | + | chr5.4:34735797-34735816 | MS.gene99261:CDS | 45.0% | |
| GTGAAGTAGTTGCACCACTA+TGG | + | chr5.4:34737324-34737343 | MS.gene99261:CDS | 45.0% | |
| GTTGGTTGAAAGCTCATGAG+TGG | + | chr5.4:34736812-34736831 | MS.gene99261:intron | 45.0% | |
| TCACGAGTGAAAGGGGTAAT+TGG | - | chr5.4:34737449-34737468 | None:intergenic | 45.0% | |
| TCTCATGTGACGATCAAGGA+GGG | - | chr5.4:34737060-34737079 | None:intergenic | 45.0% | |
| TGACATGTCACGAGTGAAAG+GGG | - | chr5.4:34737456-34737475 | None:intergenic | 45.0% | |
| TGGATCTCATGTGACGATCA+AGG | - | chr5.4:34737064-34737083 | None:intergenic | 45.0% | |
| TGTGCAGGTGTAACTTGACT+TGG | + | chr5.4:34734793-34734812 | MS.gene99261:intron | 45.0% | |
| ! | AATTGTCCCTTCTGGAGACT+CGG | - | chr5.4:34735030-34735049 | None:intergenic | 45.0% |
| ! | ATGCTTTTGTGCCTTCAGGT+AGG | + | chr5.4:34735525-34735544 | MS.gene99261:CDS | 45.0% |
| ! | ATTGCTCTTGCTAGTCTAGG+TGG | + | chr5.4:34735656-34735675 | MS.gene99261:CDS | 45.0% |
| ! | CAACATGCTTTTGTGCCTTC+AGG | + | chr5.4:34735521-34735540 | MS.gene99261:CDS | 45.0% |
| ! | CCTCCTCTTGTTTGTTGCTT+TGG | + | chr5.4:34735491-34735510 | MS.gene99261:CDS | 45.0% |
| ! | GGAGCCCTGAGAAATTTGTT+AGG | + | chr5.4:34735603-34735622 | MS.gene99261:CDS | 45.0% |
| ! | TGAACTCCACGAAAGCATGA+AGG | + | chr5.4:34735571-34735590 | MS.gene99261:CDS | 45.0% |
| !! | AAATTTGTTAGGGCTCCTGG+GGG | + | chr5.4:34735614-34735633 | MS.gene99261:CDS | 45.0% |
| !! | GAAATTTGTTAGGGCTCCTG+GGG | + | chr5.4:34735613-34735632 | MS.gene99261:CDS | 45.0% |
| !! | GAGAAATTTGTTAGGGCTCC+TGG | + | chr5.4:34735611-34735630 | MS.gene99261:CDS | 45.0% |
| !! | TATAAAGGGTACCTGGGAAG+TGG | - | chr5.4:34734530-34734549 | None:intergenic | 45.0% |
| !! | TGCATCTAGTTCTGCTGCTT+TGG | + | chr5.4:34735244-34735263 | MS.gene99261:CDS | 45.0% |
| !!! | AGGTGGCAAGGTTGCTTTTA+TGG | + | chr5.4:34735673-34735692 | MS.gene99261:CDS | 45.0% |
| !!! | GGTGGCAAGGTTGCTTTTAT+GGG | + | chr5.4:34735674-34735693 | MS.gene99261:CDS | 45.0% |
| AAAGCATGAAGGATGCCCTC+TGG | + | chr5.4:34735582-34735601 | MS.gene99261:CDS | 50.0% | |
| ACTCGTGACATGTCAGCATC+TGG | + | chr5.4:34737461-34737480 | MS.gene99261:CDS | 50.0% | |
| AGTGCCATAGTGGCATAGGA+AGG | - | chr5.4:34737148-34737167 | None:intergenic | 50.0% | |
| CAAATTTCTCAGGGCTCCAG+AGG | - | chr5.4:34735601-34735620 | None:intergenic | 50.0% | |
| CAAGTATATGCCCCGAGTGT+TGG | - | chr5.4:34737855-34737874 | None:intergenic | 50.0% | |
| CTCACTTTCTTCCACTTCCC+AGG | + | chr5.4:34734516-34734535 | MS.gene99261:CDS | 50.0% | |
| CTTTCCTCCGCAGGAAGATA+TGG | + | chr5.4:34738123-34738142 | MS.gene99261:CDS | 50.0% | |
| GACATGTCAGCATCTGGAGA+CGG | + | chr5.4:34737467-34737486 | MS.gene99261:CDS | 50.0% | |
| GCGATTGGACTTTGTTGGCA+AGG | + | chr5.4:34737720-34737739 | MS.gene99261:intron | 50.0% | |
| GCTGACATGTCACGAGTGAA+AGG | - | chr5.4:34737458-34737477 | None:intergenic | 50.0% | |
| GGATGAGACTGACGATGGTT+TGG | + | chr5.4:34735421-34735440 | MS.gene99261:CDS | 50.0% | |
| TACTACACCACAGAGCTCGA+TGG | + | chr5.4:34737398-34737417 | MS.gene99261:CDS | 50.0% | |
| TATCAAGGAGCCAACACTCG+GGG | + | chr5.4:34737842-34737861 | MS.gene99261:intron | 50.0% | |
| TATGCCACTATGGCACTCTC+AGG | + | chr5.4:34737151-34737170 | MS.gene99261:CDS | 50.0% | |
| TGGATACTTGGTCGAGTACG+TGG | + | chr5.4:34738100-34738119 | MS.gene99261:CDS | 50.0% | |
| ! | CTTGATAGCTCGCAAAGTCG+TGG | - | chr5.4:34737084-34737103 | None:intergenic | 50.0% |
| ! | GACTGACGATGGTTTGGATC+TGG | + | chr5.4:34735427-34735446 | MS.gene99261:CDS | 50.0% |
| ! | GCCATTGCTCTTGCTAGTCT+AGG | + | chr5.4:34735653-34735672 | MS.gene99261:CDS | 50.0% |
| ! | TCTTGCTAGTCTAGGTGGCA+AGG | + | chr5.4:34735661-34735680 | MS.gene99261:CDS | 50.0% |
| !! | CAGATGGTGTTATCCCGCAT+AGG | - | chr5.4:34737253-34737272 | None:intergenic | 50.0% |
| !! | CGAGTGTTGGCTCCTTGATA+TGG | - | chr5.4:34737842-34737861 | None:intergenic | 50.0% |
| !! | TCTTCCTGAGAGTGCCATAG+TGG | - | chr5.4:34737158-34737177 | None:intergenic | 50.0% |
| !! | TGAGAGTGCCATAGTGGCAT+AGG | - | chr5.4:34737152-34737171 | None:intergenic | 50.0% |
| AACAGCACCATCGAGCTCTG+TGG | - | chr5.4:34737408-34737427 | None:intergenic | 55.0% | |
| CGAAAGCCGAGTCTCCAGAA+GGG | + | chr5.4:34735021-34735040 | MS.gene99261:CDS | 55.0% | |
| CTATTGGCAGGCCTACCTGA+AGG | - | chr5.4:34735539-34735558 | None:intergenic | 55.0% | |
| CTTCAGGTAGGCCTGCCAAT+AGG | + | chr5.4:34735537-34735556 | MS.gene99261:CDS | 55.0% | |
| GGGCATCCTTCATGCTTTCG+TGG | - | chr5.4:34735580-34735599 | None:intergenic | 55.0% | |
| GTGGAGGATGAGACTGACGA+TGG | + | chr5.4:34735416-34735435 | MS.gene99261:CDS | 55.0% | |
| TCCTCCATATCTTCCTGCGG+AGG | - | chr5.4:34738130-34738149 | None:intergenic | 55.0% | |
| TCCTCCGCAGGAAGATATGG+AGG | + | chr5.4:34738126-34738145 | MS.gene99261:CDS | 55.0% | |
| TCGAAAGCCGAGTCTCCAGA+AGG | + | chr5.4:34735020-34735039 | MS.gene99261:CDS | 55.0% | |
| TCTGGAGACGGCATTGTTGC+AGG | + | chr5.4:34737479-34737498 | MS.gene99261:CDS | 55.0% | |
| ! | GGTGGTGGTGAAGCCGAAAT+CGG | + | chr5.4:34735362-34735381 | MS.gene99261:CDS | 55.0% |
| !! | AGCTCGATGGTGCTGTTAGC+GGG | + | chr5.4:34737411-34737430 | MS.gene99261:CDS | 55.0% |
| !! | GAGCTCGATGGTGCTGTTAG+CGG | + | chr5.4:34737410-34737429 | MS.gene99261:CDS | 55.0% |
| AGTACGTGGCTTTCCTCCGC+AGG | + | chr5.4:34738114-34738133 | MS.gene99261:CDS | 60.0% | |
| !! | CGATGGTGCTGTTAGCGGGA+TGG | + | chr5.4:34737415-34737434 | MS.gene99261:CDS | 60.0% |
| !! | TGGTGCTGTTAGCGGGATGG+AGG | + | chr5.4:34737418-34737437 | MS.gene99261:CDS | 60.0% |
| ACACTACCGGCACAACCCCC+AGG | - | chr5.4:34735632-34735651 | None:intergenic | 65.0% | |
| AGGGCTCCTGGGGGTTGTGC+CGG | + | chr5.4:34735623-34735642 | MS.gene99261:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 34734497 | 34738225 | 34734497 | ID=MS.gene99261 |
| chr5.4 | mRNA | 34734497 | 34738225 | 34734497 | ID=MS.gene99261.t1;Parent=MS.gene99261 |
| chr5.4 | exon | 34734497 | 34734537 | 34734497 | ID=MS.gene99261.t1.exon1;Parent=MS.gene99261.t1 |
| chr5.4 | CDS | 34734497 | 34734537 | 34734497 | ID=cds.MS.gene99261.t1;Parent=MS.gene99261.t1 |
| chr5.4 | exon | 34734800 | 34735146 | 34734800 | ID=MS.gene99261.t1.exon2;Parent=MS.gene99261.t1 |
| chr5.4 | CDS | 34734800 | 34735146 | 34734800 | ID=cds.MS.gene99261.t1;Parent=MS.gene99261.t1 |
| chr5.4 | exon | 34735243 | 34735907 | 34735243 | ID=MS.gene99261.t1.exon3;Parent=MS.gene99261.t1 |
| chr5.4 | CDS | 34735243 | 34735907 | 34735243 | ID=cds.MS.gene99261.t1;Parent=MS.gene99261.t1 |
| chr5.4 | exon | 34737029 | 34737500 | 34737029 | ID=MS.gene99261.t1.exon4;Parent=MS.gene99261.t1 |
| chr5.4 | CDS | 34737029 | 34737500 | 34737029 | ID=cds.MS.gene99261.t1;Parent=MS.gene99261.t1 |
| chr5.4 | exon | 34737999 | 34738225 | 34737999 | ID=MS.gene99261.t1.exon5;Parent=MS.gene99261.t1 |
| chr5.4 | CDS | 34737999 | 34738225 | 34737999 | ID=cds.MS.gene99261.t1;Parent=MS.gene99261.t1 |
| Gene Sequence |
| Protein sequence |
