Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99506.t1 | XP_003623366.1 | 98.9 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 1.20E-99 | 372.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99506.t1 | O80920 | 75.1 | 177 | 35 | 2 | 5 | 180 | 31 | 199 | 3.3e-71 | 269.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99506.t1 | G7KT83 | 98.9 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 8.4e-100 | 372.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052795 | MS.gene99506 | 0.846667 | 1.88E-59 | -1.69E-46 |
| MS.gene054809 | MS.gene99506 | 0.824876 | 6.36E-54 | -1.69E-46 |
| MS.gene054810 | MS.gene99506 | 0.853073 | 3.04E-61 | -1.69E-46 |
| MS.gene055767 | MS.gene99506 | 0.830396 | 3.01E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99506 | MS.gene24547 | PPI |
| MS.gene051624 | MS.gene99506 | PPI |
| MS.gene99506 | MS.gene57223 | PPI |
| MS.gene32980 | MS.gene99506 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99506.t1 | MTR_7g070050 | 98.925 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 1.25e-136 | 379 |
| MS.gene99506.t1 | MTR_4g014460 | 68.156 | 179 | 51 | 3 | 1 | 178 | 36 | 209 | 5.99e-86 | 252 |
| MS.gene99506.t1 | MTR_3g071740 | 66.286 | 175 | 50 | 3 | 4 | 177 | 57 | 223 | 5.16e-79 | 235 |
| MS.gene99506.t1 | MTR_5g083270 | 66.667 | 177 | 49 | 4 | 4 | 178 | 37 | 205 | 2.92e-77 | 229 |
| MS.gene99506.t1 | MTR_8g027805 | 55.090 | 167 | 69 | 3 | 13 | 179 | 18 | 178 | 3.54e-63 | 193 |
| MS.gene99506.t1 | MTR_1g028380 | 56.213 | 169 | 68 | 3 | 11 | 179 | 17 | 179 | 7.13e-63 | 192 |
| MS.gene99506.t1 | MTR_5g030500 | 58.788 | 165 | 65 | 2 | 13 | 176 | 44 | 206 | 4.76e-62 | 191 |
| MS.gene99506.t1 | MTR_3g090980 | 54.335 | 173 | 73 | 3 | 7 | 179 | 15 | 181 | 1.18e-61 | 190 |
| MS.gene99506.t1 | MTR_1g016480 | 52.601 | 173 | 77 | 3 | 13 | 185 | 39 | 206 | 4.47e-61 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99506.t1 | AT2G38310 | 75.141 | 177 | 35 | 2 | 5 | 180 | 31 | 199 | 1.32e-86 | 253 |
| MS.gene99506.t1 | AT2G40330 | 67.647 | 170 | 51 | 3 | 9 | 177 | 44 | 210 | 2.62e-82 | 243 |
| MS.gene99506.t1 | AT5G05440 | 66.265 | 166 | 47 | 3 | 9 | 173 | 41 | 198 | 2.64e-76 | 227 |
| MS.gene99506.t1 | AT1G01360 | 55.882 | 170 | 69 | 2 | 16 | 185 | 24 | 187 | 3.01e-65 | 199 |
| MS.gene99506.t1 | AT5G53160 | 52.247 | 178 | 78 | 3 | 2 | 179 | 9 | 179 | 3.09e-63 | 194 |
| MS.gene99506.t1 | AT4G01026 | 56.707 | 164 | 65 | 3 | 17 | 180 | 27 | 184 | 5.99e-62 | 191 |
| MS.gene99506.t1 | AT2G26040 | 54.762 | 168 | 67 | 2 | 8 | 172 | 17 | 178 | 2.09e-61 | 189 |
| MS.gene99506.t1 | AT4G17870 | 51.667 | 180 | 81 | 2 | 1 | 179 | 5 | 179 | 3.64e-60 | 186 |
| MS.gene99506.t1 | AT4G27920 | 46.591 | 176 | 89 | 2 | 11 | 186 | 12 | 182 | 2.17e-56 | 176 |
| MS.gene99506.t1 | AT1G73000 | 50.595 | 168 | 77 | 3 | 11 | 172 | 34 | 201 | 5.24e-56 | 176 |
| MS.gene99506.t1 | AT5G45860 | 55.758 | 165 | 60 | 2 | 15 | 179 | 6 | 157 | 3.65e-51 | 162 |
| MS.gene99506.t1 | AT5G46790 | 53.757 | 173 | 77 | 2 | 7 | 178 | 38 | 208 | 2.15e-50 | 162 |
| MS.gene99506.t1 | AT5G46790 | 53.757 | 173 | 77 | 2 | 7 | 178 | 38 | 208 | 2.15e-50 | 162 |
| MS.gene99506.t1 | AT5G45870 | 56.209 | 153 | 60 | 1 | 26 | 178 | 10 | 155 | 1.27e-49 | 158 |
| MS.gene99506.t1 | AT4G18620 | 51.553 | 161 | 67 | 3 | 24 | 178 | 7 | 162 | 7.27e-40 | 133 |
| MS.gene99506.t1 | AT5G53160 | 52.679 | 112 | 51 | 2 | 2 | 113 | 9 | 118 | 2.88e-36 | 124 |
Find 69 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGAAATTTGCTGAGAATT+TGG | 0.108745 | 7.1:-32178536 | MS.gene99506:CDS |
| TGGTAGCGGGCGATGGCGTC+GGG | 0.286221 | 7.1:+32179021 | None:intergenic |
| GGGACGGTGGTTGTTGGGTT+TGG | 0.316747 | 7.1:+32179042 | None:intergenic |
| GTGGTAGCGGGCGATGGCGT+CGG | 0.350975 | 7.1:+32179020 | None:intergenic |
| GCGTCGGGGACGGTGGTTGT+TGG | 0.355449 | 7.1:+32179036 | None:intergenic |
| ACGGCGGAGCAACACTGGTT+GGG | 0.355563 | 7.1:+32178982 | None:intergenic |
| GTATCTTCAGTGGTGTTTCC+AGG | 0.355878 | 7.1:+32178604 | None:intergenic |
| CGTCGGGGACGGTGGTTGTT+GGG | 0.383221 | 7.1:+32179037 | None:intergenic |
| TCTTCGTCGGAGATCGGACT+AGG | 0.424642 | 7.1:+32178682 | None:intergenic |
| GACTGCGTGGGTGTGGTAGC+GGG | 0.430031 | 7.1:+32179008 | None:intergenic |
| CAAATTTCGCGAGAGATTGA+AGG | 0.431244 | 7.1:+32178548 | None:intergenic |
| AGACTGCGTGGGTGTGGTAG+CGG | 0.434046 | 7.1:+32179007 | None:intergenic |
| GCTGACAGCGGCGGGGAGGC+CGG | 0.435041 | 7.1:+32178810 | None:intergenic |
| AGACGGGTGCGGCGATTTGT+TGG | 0.442519 | 7.1:+32178956 | None:intergenic |
| GCGGGCGATGGCGTCGGGGA+CGG | 0.442801 | 7.1:+32179026 | None:intergenic |
| CGTTCGGTGCTGACAGCGGC+GGG | 0.446228 | 7.1:+32178802 | None:intergenic |
| CGGCGGAGCAACACTGGTTG+GGG | 0.450760 | 7.1:+32178983 | None:intergenic |
| GTGGGTGTGGTAGCGGGCGA+TGG | 0.478652 | 7.1:+32179014 | None:intergenic |
| GTCTAGGACTTCGAGACGTT+CGG | 0.489158 | 7.1:+32178786 | None:intergenic |
| CGTGAAGTCCGTGTCATCTC+CGG | 0.492295 | 7.1:-32178829 | MS.gene99506:CDS |
| CGGAGATGACACGGACTTCA+CGG | 0.493471 | 7.1:+32178830 | None:intergenic |
| GCATGATCGGTGGTGATCAC+CGG | 0.500077 | 7.1:-32178738 | MS.gene99506:CDS |
| CCGCACCCGTCTCCACCGTC+TGG | 0.503156 | 7.1:-32178945 | MS.gene99506:CDS |
| GGCGATGGCGTCGGGGACGG+TGG | 0.507167 | 7.1:+32179029 | None:intergenic |
| TACGTTGTTGATGTTCCACC+TGG | 0.511693 | 7.1:-32178622 | MS.gene99506:CDS |
| GTCATCAGCTTCAGCATGAT+CGG | 0.512224 | 7.1:-32178751 | MS.gene99506:CDS |
| TGTTTGTTGATACTATTCTT+CGG | 0.519630 | 7.1:-32178576 | MS.gene99506:CDS |
| GACGGCGGAGCAACACTGGT+TGG | 0.519929 | 7.1:+32178981 | None:intergenic |
| TTGCCATCTTCGTCGGAGAT+CGG | 0.523840 | 7.1:+32178676 | None:intergenic |
| AGTCCGATCTCCGACGAAGA+TGG | 0.524898 | 7.1:-32178679 | MS.gene99506:CDS |
| ACGAAGTGTTTGTAGGCTTG+TGG | 0.526533 | 7.1:+32178898 | None:intergenic |
| TACGGACCAGACGGTGGAGA+CGG | 0.531050 | 7.1:+32178939 | None:intergenic |
| TGCCGTCACCGAGGATTACA+TGG | 0.548078 | 7.1:+32178866 | None:intergenic |
| ACGGACCAGACGGTGGAGAC+GGG | 0.550345 | 7.1:+32178940 | None:intergenic |
| GCGTTGGTTGCCATCTTCGT+CGG | 0.552270 | 7.1:+32178669 | None:intergenic |
| CAACCACCGTGCCGGAGCGT+TGG | 0.554675 | 7.1:+32178653 | None:intergenic |
| TGACATGACGTTCATCGTCT+AGG | 0.555135 | 7.1:+32178770 | None:intergenic |
| CGGGGAGGCCGGAGATGACA+CGG | 0.556039 | 7.1:+32178821 | None:intergenic |
| TGCGGCGATTTGTTGGATGA+CGG | 0.556569 | 7.1:+32178963 | None:intergenic |
| GAAGATGGCAACCAACGCTC+CGG | 0.557103 | 7.1:-32178664 | MS.gene99506:CDS |
| ATTGTCGAAGCGACGGACTA+CGG | 0.565639 | 7.1:+32178921 | None:intergenic |
| ACGTTCGGTGCTGACAGCGG+CGG | 0.570809 | 7.1:+32178801 | None:intergenic |
| TGCCATGTAATCCTCGGTGA+CGG | 0.575327 | 7.1:-32178868 | MS.gene99506:CDS |
| CGGTGCTGACAGCGGCGGGG+AGG | 0.581007 | 7.1:+32178806 | None:intergenic |
| GGATTCAACAACCACCGTGC+CGG | 0.581765 | 7.1:+32178645 | None:intergenic |
| AAAAGCTGCCATGTAATCCT+CGG | 0.586229 | 7.1:-32178874 | MS.gene99506:CDS |
| GGATGACGGCGGAGCAACAC+TGG | 0.592996 | 7.1:+32178977 | None:intergenic |
| CTTCGTCGGAGATCGGACTA+GGG | 0.595738 | 7.1:+32178683 | None:intergenic |
| CCAGACGGTGGAGACGGGTG+CGG | 0.600624 | 7.1:+32178945 | None:intergenic |
| TCTTCAGTGGTGTTTCCAGG+TGG | 0.600688 | 7.1:+32178607 | None:intergenic |
| GGTGAAGAGTGGTGACAGAA+CGG | 0.622514 | 7.1:+32178704 | None:intergenic |
| GCGACGGACTACGGACCAGA+CGG | 0.625454 | 7.1:+32178930 | None:intergenic |
| TGGCAACCAACGCTCCGGCA+CGG | 0.627638 | 7.1:-32178659 | MS.gene99506:CDS |
| AAACACACATGTATCTTCAG+TGG | 0.628787 | 7.1:+32178594 | None:intergenic |
| TCGTTGATTTGATCTCGTTG+AGG | 0.631063 | 7.1:+32178513 | None:intergenic |
| GGTAGCGGGCGATGGCGTCG+GGG | 0.638452 | 7.1:+32179022 | None:intergenic |
| GGCGGAGCAACACTGGTTGG+GGG | 0.641966 | 7.1:+32178984 | None:intergenic |
| ACGGACTACGGACCAGACGG+TGG | 0.644893 | 7.1:+32178933 | None:intergenic |
| GAGACGTTCGGTGCTGACAG+CGG | 0.650293 | 7.1:+32178798 | None:intergenic |
| ATCCTCGGTGACGGCAACGT+CGG | 0.652459 | 7.1:-32178859 | MS.gene99506:CDS |
| ATCAGCTTCAGCATGATCGG+TGG | 0.655710 | 7.1:-32178748 | MS.gene99506:CDS |
| GTTCGGTGCTGACAGCGGCG+GGG | 0.655778 | 7.1:+32178803 | None:intergenic |
| CAGAACGGTAGTTAGCAAGC+CGG | 0.656130 | 7.1:+32178719 | None:intergenic |
| GATCGGACTAGGGTGAAGAG+TGG | 0.660402 | 7.1:+32178693 | None:intergenic |
| CTTGTGGATTGTCGAAGCGA+CGG | 0.660521 | 7.1:+32178914 | None:intergenic |
| CAACCAACGCTCCGGCACGG+TGG | 0.673035 | 7.1:-32178656 | MS.gene99506:CDS |
| GGCGATTTGTTGGATGACGG+CGG | 0.674940 | 7.1:+32178966 | None:intergenic |
| TGCCGACGTTGCCGTCACCG+AGG | 0.697315 | 7.1:+32178857 | None:intergenic |
| AGGTGGAACATCAACAACGT+AGG | 0.714920 | 7.1:+32178624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTTGTTGATACTATTCTT+CGG | - | chr7.1:32178982-32179001 | MS.gene99506:CDS | 25.0% |
| AAACACACATGTATCTTCAG+TGG | + | chr7.1:32178967-32178986 | None:intergenic | 35.0% | |
| AAAAGCTGCCATGTAATCCT+CGG | - | chr7.1:32178684-32178703 | MS.gene99506:CDS | 40.0% | |
| CAAATTTCGCGAGAGATTGA+AGG | + | chr7.1:32179013-32179032 | None:intergenic | 40.0% | |
| !! | CGCGAAATTTGCTGAGAATT+TGG | - | chr7.1:32179022-32179041 | MS.gene99506:CDS | 40.0% |
| !! | GCTTTTGACGAAGTGTTTGT+AGG | + | chr7.1:32178670-32178689 | None:intergenic | 40.0% |
| !! | TCGTTGATTTGATCTCGTTG+AGG | + | chr7.1:32179048-32179067 | None:intergenic | 40.0% |
| AGGTGGAACATCAACAACGT+AGG | + | chr7.1:32178937-32178956 | None:intergenic | 45.0% | |
| GTATCTTCAGTGGTGTTTCC+AGG | + | chr7.1:32178957-32178976 | None:intergenic | 45.0% | |
| GTCATCAGCTTCAGCATGAT+CGG | - | chr7.1:32178807-32178826 | MS.gene99506:CDS | 45.0% | |
| TACGTTGTTGATGTTCCACC+TGG | - | chr7.1:32178936-32178955 | MS.gene99506:CDS | 45.0% | |
| TGACATGACGTTCATCGTCT+AGG | + | chr7.1:32178791-32178810 | None:intergenic | 45.0% | |
| ! | ACGAAGTGTTTGTAGGCTTG+TGG | + | chr7.1:32178663-32178682 | None:intergenic | 45.0% |
| ATCAGCTTCAGCATGATCGG+TGG | - | chr7.1:32178810-32178829 | MS.gene99506:CDS | 50.0% | |
| CAGAACGGTAGTTAGCAAGC+CGG | + | chr7.1:32178842-32178861 | None:intergenic | 50.0% | |
| GGTGAAGAGTGGTGACAGAA+CGG | + | chr7.1:32178857-32178876 | None:intergenic | 50.0% | |
| TCTTCAGTGGTGTTTCCAGG+TGG | + | chr7.1:32178954-32178973 | None:intergenic | 50.0% | |
| TGCCATGTAATCCTCGGTGA+CGG | - | chr7.1:32178690-32178709 | MS.gene99506:CDS | 50.0% | |
| TTGCCATCTTCGTCGGAGAT+CGG | + | chr7.1:32178885-32178904 | None:intergenic | 50.0% | |
| ! | CTTGTGGATTGTCGAAGCGA+CGG | + | chr7.1:32178647-32178666 | None:intergenic | 50.0% |
| ! | GTCTAGGACTTCGAGACGTT+CGG | + | chr7.1:32178775-32178794 | None:intergenic | 50.0% |
| !! | ATTGTCGAAGCGACGGACTA+CGG | + | chr7.1:32178640-32178659 | None:intergenic | 50.0% |
| !! | TGCGGCGATTTGTTGGATGA+CGG | + | chr7.1:32178598-32178617 | None:intergenic | 50.0% |
| AGTCCGATCTCCGACGAAGA+TGG | - | chr7.1:32178879-32178898 | MS.gene99506:CDS | 55.0% | |
| CGGAGATGACACGGACTTCA+CGG | + | chr7.1:32178731-32178750 | None:intergenic | 55.0% | |
| CGTGAAGTCCGTGTCATCTC+CGG | - | chr7.1:32178729-32178748 | MS.gene99506:CDS | 55.0% | |
| CTTCGTCGGAGATCGGACTA+GGG | + | chr7.1:32178878-32178897 | None:intergenic | 55.0% | |
| GAAGATGGCAACCAACGCTC+CGG | - | chr7.1:32178894-32178913 | MS.gene99506:CDS | 55.0% | |
| GCATGATCGGTGGTGATCAC+CGG | - | chr7.1:32178820-32178839 | MS.gene99506:CDS | 55.0% | |
| GGATTCAACAACCACCGTGC+CGG | + | chr7.1:32178916-32178935 | None:intergenic | 55.0% | |
| TCTTCGTCGGAGATCGGACT+AGG | + | chr7.1:32178879-32178898 | None:intergenic | 55.0% | |
| TGCCGTCACCGAGGATTACA+TGG | + | chr7.1:32178695-32178714 | None:intergenic | 55.0% | |
| ! | GATCGGACTAGGGTGAAGAG+TGG | + | chr7.1:32178868-32178887 | None:intergenic | 55.0% |
| !! | GCGTTGGTTGCCATCTTCGT+CGG | + | chr7.1:32178892-32178911 | None:intergenic | 55.0% |
| !! | GGCGATTTGTTGGATGACGG+CGG | + | chr7.1:32178595-32178614 | None:intergenic | 55.0% |
| AGACGGGTGCGGCGATTTGT+TGG | + | chr7.1:32178605-32178624 | None:intergenic | 60.0% | |
| AGACTGCGTGGGTGTGGTAG+CGG | + | chr7.1:32178554-32178573 | None:intergenic | 60.0% | |
| GGGACGGTGGTTGTTGGGTT+TGG | + | chr7.1:32178519-32178538 | None:intergenic | 60.0% | |
| TACGGACCAGACGGTGGAGA+CGG | + | chr7.1:32178622-32178641 | None:intergenic | 60.0% | |
| ! | ACGGCGGAGCAACACTGGTT+GGG | + | chr7.1:32178579-32178598 | None:intergenic | 60.0% |
| ! | ATCCTCGGTGACGGCAACGT+CGG | - | chr7.1:32178699-32178718 | MS.gene99506:CDS | 60.0% |
| !! | GAGACGTTCGGTGCTGACAG+CGG | + | chr7.1:32178763-32178782 | None:intergenic | 60.0% |
| ACGGACCAGACGGTGGAGAC+GGG | + | chr7.1:32178621-32178640 | None:intergenic | 65.0% | |
| ACTGGTTGGGGGAGACTGCG+TGG | + | chr7.1:32178566-32178585 | None:intergenic | 65.0% | |
| CGTCGGGGACGGTGGTTGTT+GGG | + | chr7.1:32178524-32178543 | None:intergenic | 65.0% | |
| CTGGTTGGGGGAGACTGCGT+GGG | + | chr7.1:32178565-32178584 | None:intergenic | 65.0% | |
| GACGGCGGAGCAACACTGGT+TGG | + | chr7.1:32178580-32178599 | None:intergenic | 65.0% | |
| GACTGCGTGGGTGTGGTAGC+GGG | + | chr7.1:32178553-32178572 | None:intergenic | 65.0% | |
| TGGCAACCAACGCTCCGGCA+CGG | - | chr7.1:32178899-32178918 | MS.gene99506:CDS | 65.0% | |
| ! | ACGGACTACGGACCAGACGG+TGG | + | chr7.1:32178628-32178647 | None:intergenic | 65.0% |
| ! | CGGCGGAGCAACACTGGTTG+GGG | + | chr7.1:32178578-32178597 | None:intergenic | 65.0% |
| ! | GGATGACGGCGGAGCAACAC+TGG | + | chr7.1:32178584-32178603 | None:intergenic | 65.0% |
| ! | GGCGGAGCAACACTGGTTGG+GGG | + | chr7.1:32178577-32178596 | None:intergenic | 65.0% |
| !! | ACGTTCGGTGCTGACAGCGG+CGG | + | chr7.1:32178760-32178779 | None:intergenic | 65.0% |
| !! | GCGACGGACTACGGACCAGA+CGG | + | chr7.1:32178631-32178650 | None:intergenic | 65.0% |
| CAACCAACGCTCCGGCACGG+TGG | - | chr7.1:32178902-32178921 | MS.gene99506:CDS | 70.0% | |
| CAACCACCGTGCCGGAGCGT+TGG | + | chr7.1:32178908-32178927 | None:intergenic | 70.0% | |
| CCAGACGGTGGAGACGGGTG+CGG | + | chr7.1:32178616-32178635 | None:intergenic | 70.0% | |
| CGGGGAGGCCGGAGATGACA+CGG | + | chr7.1:32178740-32178759 | None:intergenic | 70.0% | |
| GCGTCGGGGACGGTGGTTGT+TGG | + | chr7.1:32178525-32178544 | None:intergenic | 70.0% | |
| TGCCGACGTTGCCGTCACCG+AGG | + | chr7.1:32178704-32178723 | None:intergenic | 70.0% | |
| TGGGGGAGACTGCGTGGGTG+TGG | + | chr7.1:32178560-32178579 | None:intergenic | 70.0% | |
| !! | CGTTCGGTGCTGACAGCGGC+GGG | + | chr7.1:32178759-32178778 | None:intergenic | 70.0% |
| !! | GTGGGTGTGGTAGCGGGCGA+TGG | + | chr7.1:32178547-32178566 | None:intergenic | 70.0% |
| !! | GTGGTAGCGGGCGATGGCGT+CGG | + | chr7.1:32178541-32178560 | None:intergenic | 70.0% |
| !! | GTTCGGTGCTGACAGCGGCG+GGG | + | chr7.1:32178758-32178777 | None:intergenic | 70.0% |
| !! | TGGTAGCGGGCGATGGCGTC+GGG | + | chr7.1:32178540-32178559 | None:intergenic | 70.0% |
| CCGCACCCGTCTCCACCGTC+TGG | - | chr7.1:32178613-32178632 | MS.gene99506:CDS | 75.0% | |
| !! | GGTAGCGGGCGATGGCGTCG+GGG | + | chr7.1:32178539-32178558 | None:intergenic | 75.0% |
| ! | GCTGACAGCGGCGGGGAGGC+CGG | + | chr7.1:32178751-32178770 | None:intergenic | 80.0% |
| !! | GCGGGCGATGGCGTCGGGGA+CGG | + | chr7.1:32178535-32178554 | None:intergenic | 80.0% |
| !! | GGCGATGGCGTCGGGGACGG+TGG | + | chr7.1:32178532-32178551 | None:intergenic | 80.0% |
| !!! | CGGTGCTGACAGCGGCGGGG+AGG | + | chr7.1:32178755-32178774 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 32178510 | 32179070 | 32178510 | ID=MS.gene99506 |
| chr7.1 | mRNA | 32178510 | 32179070 | 32178510 | ID=MS.gene99506.t1;Parent=MS.gene99506 |
| chr7.1 | exon | 32178510 | 32179070 | 32178510 | ID=MS.gene99506.t1.exon1;Parent=MS.gene99506.t1 |
| chr7.1 | CDS | 32178510 | 32179070 | 32178510 | ID=cds.MS.gene99506.t1;Parent=MS.gene99506.t1 |
| Gene Sequence |
| Protein sequence |
