AlfalfaGEDB | MS.gene99678

M. sativa cultivar XinJiangDaYe / MS.gene99678

KEGG: K10880
GO: GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005524 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363
PFAM: PF08423.14

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99678.t1	KEH37691.1	95.1	287	8	1	15	295	1	287	1.50E-149	538.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99678.t1	Q9FKM5	51.4	284	115	5	26	287	20	302	8.2e-72	271.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99678.t1	A0A072V7S1	95.1	287	8	1	15	295	1	287	1.1e-149	538.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene99678	MS.gene56256	PPI
MS.gene63514	MS.gene99678	PPI
MS.gene009458	MS.gene99678	PPI
MS.gene51627	MS.gene99678	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99678.t1	MTR_2g445230	95.122	287	8	1	15	295	1	287	0.0	548
MS.gene99678.t1	MTR_4g124560	30.112	269	163	6	19	287	96	339	1.12e-24	101
MS.gene99678.t1	MTR_2g093050	30.769	273	148	8	34	288	91	340	3.86e-23	98.6
MS.gene99678.t1	MTR_4g024850	28.148	270	156	7	28	284	90	334	5.66e-22	94.4
MS.gene99678.t1	MTR_4g111780	28.148	270	156	8	28	284	90	334	2.32e-21	92.8
MS.gene99678.t1	MTR_1g102670	33.333	183	106	4	26	205	87	256	3.35e-17	80.5
MS.gene99678.t1	MTR_4g062540	28.821	229	125	8	28	250	90	286	7.76e-12	65.1
MS.gene99678.t1	MTR_4g062540	29.310	232	127	9	28	250	90	293	1.95e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99678.t1	AT5G57450	51.049	286	117	5	24	287	18	302	8.30e-93	277
MS.gene99678.t1	AT5G57450	51.049	286	117	5	24	287	18	302	8.30e-93	277
MS.gene99678.t1	AT5G20850	31.461	267	156	7	19	284	97	337	2.05e-25	103
MS.gene99678.t1	AT5G20850	34.375	192	114	4	19	209	97	277	5.01e-22	94.4
MS.gene99678.t1	AT3G22880	30.534	262	150	7	26	284	107	339	1.64e-21	93.2
MS.gene99678.t1	AT2G45280	28.571	238	132	6	26	247	104	319	2.02e-20	90.5
MS.gene99678.t1	AT2G28560	30.303	264	153	8	34	284	59	304	2.26e-20	90.1
MS.gene99678.t1	AT2G28560	30.303	264	153	8	34	284	91	336	2.84e-20	90.1
MS.gene99678.t1	AT2G28560	30.303	264	153	8	34	284	91	336	2.84e-20	90.1
MS.gene99678.t1	AT2G28560	30.303	264	153	8	34	284	91	336	2.84e-20	90.1
MS.gene99678.t1	AT2G45280	28.571	238	132	6	26	247	128	343	3.10e-20	90.1
MS.gene99678.t1	AT2G28560	30.303	264	153	8	34	284	91	336	4.16e-20	89.7
MS.gene99678.t1	AT3G22880	30.279	251	143	7	26	273	107	328	4.85e-19	86.3
MS.gene99678.t1	AT2G28560	33.898	177	99	5	34	204	59	223	1.05e-15	75.5
MS.gene99678.t1	AT1G07745	35.252	139	76	5	28	162	72	200	6.08e-11	61.2

Find 89 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTAGGAAATTGAGAACATTT+AGG	0.234968	2.1:+39436383	MS.gene99678:CDS
TAGGAAATTGAGAACATTTA+GGG	0.270441	2.1:+39436384	MS.gene99678:CDS
TTCTTGTCGAGGGAGGAATT+TGG	0.275226	2.1:+39436352	MS.gene99678:CDS
TCTTGTCGAGGGAGGAATTT+GGG	0.281757	2.1:+39436353	MS.gene99678:CDS
AGGAATTTGGGGAGGGTAGT+AGG	0.294515	2.1:+39436365	MS.gene99678:CDS
TGTTCTGAGTTTGTTATTAC+AGG	0.311721	2.1:+39436436	MS.gene99678:CDS
TAGAAGGGTTTGTCCCGCTT+TGG	0.333969	2.1:+39436294	MS.gene99678:CDS
AAACGTTGGCGGAGAGGTTT+GGG	0.342466	2.1:+39436179	MS.gene99678:CDS
AAAACGTTGGCGGAGAGGTT+TGG	0.344119	2.1:+39436178	MS.gene99678:CDS
ACTTGTATTCCTCGGGTAGA+AGG	0.352847	2.1:+39436278	MS.gene99678:CDS
AGAAGGGTTTGTCCCGCTTT+GGG	0.362324	2.1:+39436295	MS.gene99678:CDS
GAGAGGGTCAGTTCCCATTC+CGG	0.365288	2.1:-39435939	None:intergenic
AGAATGAAGGTCTGAGGATT+GGG	0.369884	2.1:+39436245	MS.gene99678:CDS
AGAGGGTCAGTTCCCATTCC+GGG	0.374502	2.1:-39435938	None:intergenic
GGTTGTGGTTGTTACAAATC+AGG	0.380826	2.1:+39436204	MS.gene99678:CDS
TCCGCTTTCGGCGACGAGTT+CGG	0.394080	2.1:-39435759	None:intergenic
ACAACCTACGCTGCATTTCT+CGG	0.395622	2.1:-39435687	None:intergenic
TCAACTACGATAACTCTAAC+AGG	0.405318	2.1:-39436061	None:intergenic
GGAGAGGTTTGGGTTGGTTG+TGG	0.408109	2.1:+39436189	MS.gene99678:CDS
GCGGATGGGGAAAGGGTATT+CGG	0.409787	2.1:-39435876	None:intergenic
GTCCCGCTTTGGGTTTGTCA+TGG	0.410520	2.1:+39436305	MS.gene99678:CDS
GAGTTGTTTGAGGCGGCGGA+TGG	0.425263	2.1:-39435891	None:intergenic
TCCCGCTTTGGGTTTGTCAT+GGG	0.436934	2.1:+39436306	MS.gene99678:CDS
GAGAATGAAGGTCTGAGGAT+TGG	0.442692	2.1:+39436244	MS.gene99678:CDS
GCGGAGAGGCCGCCGTGGGA+GGG	0.444564	2.1:-39435833	None:intergenic
GAGTTTGTTATTACAGGTGC+AGG	0.446077	2.1:+39436442	MS.gene99678:CDS
TGAATTTGAAAACTCTATGT+TGG	0.454312	2.1:+39436108	MS.gene99678:CDS
GCGAGGCAGCGATCAAGAAC+GGG	0.454625	2.1:-39435710	None:intergenic
CTCGTCGCCGAAAGCGGAAG+CGG	0.460895	2.1:+39435764	MS.gene99678:CDS
TTGAGGCGGCGGATGGGGAA+AGG	0.465846	2.1:-39435884	None:intergenic
GAGCCATGAGAACGAGTTGA+AGG	0.475655	2.1:-39435802	None:intergenic
GTGAGTAAAATCTCAATGTC+AGG	0.480727	2.1:-39436016	None:intergenic
GTTGTTTGAGGCGGCGGATG+GGG	0.483903	2.1:-39435889	None:intergenic
TGAGGCGGCGGATGGGGAAA+GGG	0.485959	2.1:-39435883	None:intergenic
AGTTGTTTGAGGCGGCGGAT+GGG	0.487558	2.1:-39435890	None:intergenic
CTCTCATCTAATCCCGGAAT+GGG	0.488251	2.1:+39435926	MS.gene99678:CDS
GGGAGAGTTGTTTGAGGCGG+CGG	0.494929	2.1:-39435895	None:intergenic
TTCTAGAATCTTCTTGTCGA+GGG	0.500424	2.1:+39436342	MS.gene99678:CDS
TCAGGTAGTTGATTTGATTG+AGG	0.500515	2.1:+39436222	MS.gene99678:CDS
GAGAGGCCGCCGTGGGAGGG+TGG	0.504686	2.1:-39435830	None:intergenic
CTTGTATTCCTCGGGTAGAA+GGG	0.514483	2.1:+39436279	MS.gene99678:CDS
TTTAGTGACTTGTATTCCTC+GGG	0.514857	2.1:+39436271	MS.gene99678:CDS
CCTCTCATCTAATCCCGGAA+TGG	0.515504	2.1:+39435925	MS.gene99678:CDS
GGCGAGGCAGCGATCAAGAA+CGG	0.516398	2.1:-39435711	None:intergenic
TGGTGGCTTGAAAACGTTGG+CGG	0.526981	2.1:+39436168	MS.gene99678:CDS
CTTGTCGAGGGAGGAATTTG+GGG	0.532305	2.1:+39436354	MS.gene99678:CDS
GATTTGATTGAGGAGAATGA+AGG	0.533385	2.1:+39436232	MS.gene99678:CDS
CTGCCTTCAACTCGTTCTCA+TGG	0.539110	2.1:+39435799	MS.gene99678:CDS
ACCGAACTCGTCGCCGAAAG+CGG	0.541419	2.1:+39435758	MS.gene99678:CDS
TTGGTGTAGATATGGGTCAA+AGG	0.554870	2.1:+39436470	MS.gene99678:CDS
GCCCATGACAAACCCAAAGC+GGG	0.555170	2.1:-39436307	None:intergenic
GAACAACATTGAGGTAAATG+AGG	0.557737	2.1:-39436418	None:intergenic
TCTTTCCTCTCATCTAATCC+CGG	0.562941	2.1:+39435920	MS.gene99678:CDS
AGCGGAGAGGCCGCCGTGGG+AGG	0.563631	2.1:-39435834	None:intergenic
TTGTGGGGATGCCGCCGGCG+AGG	0.565361	2.1:-39435727	None:intergenic
GTTGGCGGAGAGGTTTGGGT+TGG	0.566051	2.1:+39436183	MS.gene99678:CDS
GTTCTTGATCGCTGCCTCGC+CGG	0.566580	2.1:+39435713	MS.gene99678:CDS
TTGAGGAGAATGAAGGTCTG+AGG	0.572056	2.1:+39436239	MS.gene99678:CDS
CCATTCCGGGATTAGATGAG+AGG	0.578429	2.1:-39435925	None:intergenic
GGAGGAAAACGCGGTCGAGA+GGG	0.580748	2.1:-39435955	None:intergenic
TTCTGGTGGCTTGAAAACGT+TGG	0.580761	2.1:+39436165	MS.gene99678:CDS
ATTAGATGAGAGGAAAGAGC+GGG	0.597816	2.1:-39435915	None:intergenic
ATTCTAGAATCTTCTTGTCG+AGG	0.599564	2.1:+39436341	MS.gene99678:CDS
AGCGGGAGAGTTGTTTGAGG+CGG	0.599613	2.1:-39435898	None:intergenic
AAGAGCGGGAGAGTTGTTTG+AGG	0.600193	2.1:-39435901	None:intergenic
TACTCACTTACTGGAAATCG+AGG	0.601914	2.1:+39436032	MS.gene99678:CDS
GCTTGAAAACGTTGGCGGAG+AGG	0.602170	2.1:+39436173	MS.gene99678:CDS
GCTCAGCTTCCACCCTCCCA+CGG	0.602814	2.1:+39435821	MS.gene99678:CDS
CGGAGGAAAACGCGGTCGAG+AGG	0.605398	2.1:-39435956	None:intergenic
GTCGAGGGAGGAATTTGGGG+AGG	0.605528	2.1:+39436357	MS.gene99678:CDS
TAGAATCTTCTTGTCGAGGG+AGG	0.607196	2.1:+39436345	MS.gene99678:CDS
ATGAAGCGGAGAGGCCGCCG+TGG	0.621821	2.1:-39435838	None:intergenic
TGAAGCGGAGAGGCCGCCGT+GGG	0.625174	2.1:-39435837	None:intergenic
CTTGATCGCTGCCTCGCCGG+CGG	0.631545	2.1:+39435716	MS.gene99678:CDS
GTAGATATGGGTCAAAGGAA+TGG	0.632565	2.1:+39436475	MS.gene99678:CDS
AAAACCGAGAAATGCAGCGT+AGG	0.635039	2.1:+39435683	MS.gene99678:CDS
TCGAGGGAGGAATTTGGGGA+GGG	0.635636	2.1:+39436358	MS.gene99678:CDS
ACAAACTCAGAACAACATTG+AGG	0.651504	2.1:-39436427	None:intergenic
GATTAGATGAGAGGAAAGAG+CGG	0.651758	2.1:-39435916	None:intergenic
GAATATGTAGAGTGATGAAG+CGG	0.655313	2.1:-39435852	None:intergenic
AGCCCATGACAAACCCAAAG+CGG	0.660291	2.1:-39436308	None:intergenic
CCTCCGCGGAATTTACTCTG+CGG	0.689572	2.1:+39435973	MS.gene99678:CDS
TGTAGAGTGATGAAGCGGAG+AGG	0.704294	2.1:-39435847	None:intergenic
GGGACAAACCCTTCTACCCG+AGG	0.704506	2.1:-39436287	None:intergenic
CCGCAGAGTAAATTCCGCGG+AGG	0.709414	2.1:-39435973	None:intergenic
AAATTCCGCGGAGGAAAACG+CGG	0.710936	2.1:-39435964	None:intergenic
TCTCCGCAGAGTAAATTCCG+CGG	0.737709	2.1:-39435976	None:intergenic
CAATAGCGAGATGAGCACAG+CGG	0.759325	2.1:+39435649	MS.gene99678:CDS
CAGCTTCCACCCTCCCACGG+CGG	0.761661	2.1:+39435824	MS.gene99678:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TAGGAAATTGAGAACATTTA+GGG	+	chr2.1:39436384-39436403	MS.gene99678:CDS	25.0%
!	TGAATTTGAAAACTCTATGT+TGG	+	chr2.1:39436108-39436127	MS.gene99678:CDS	25.0%
	ACCAGAAATCTTGAAAAACA+AGG	-	chr2.1:39436152-39436171	None:intergenic	30.0%
	GTAGGAAATTGAGAACATTT+AGG	+	chr2.1:39436383-39436402	MS.gene99678:CDS	30.0%
!	TTGAGATTTTACTCACTTAC+TGG	+	chr2.1:39436023-39436042	MS.gene99678:CDS	30.0%
!!	TGTTCTGAGTTTGTTATTAC+AGG	+	chr2.1:39436436-39436455	MS.gene99678:CDS	30.0%
!!	TTTTAGTGACTTGTATTCCT+CGG	+	chr2.1:39436270-39436289	MS.gene99678:CDS	30.0%
!!!	TCCTTGTTTTTCAAGATTTC+TGG	+	chr2.1:39436148-39436167	MS.gene99678:CDS	30.0%
!!!	TTGTTTTTCAAGATTTCTGG+TGG	+	chr2.1:39436151-39436170	MS.gene99678:CDS	30.0%
	ACAAACTCAGAACAACATTG+AGG	-	chr2.1:39436430-39436449	None:intergenic	35.0%
	GAACAACATTGAGGTAAATG+AGG	-	chr2.1:39436421-39436440	None:intergenic	35.0%
	GAATATGTAGAGTGATGAAG+CGG	-	chr2.1:39435855-39435874	None:intergenic	35.0%
	GATTTGATTGAGGAGAATGA+AGG	+	chr2.1:39436232-39436251	MS.gene99678:CDS	35.0%
	GTGAGTAAAATCTCAATGTC+AGG	-	chr2.1:39436019-39436038	None:intergenic	35.0%
	TCAACTACGATAACTCTAAC+AGG	-	chr2.1:39436064-39436083	None:intergenic	35.0%
!	TTTAGTGACTTGTATTCCTC+GGG	+	chr2.1:39436271-39436290	MS.gene99678:CDS	35.0%
!!	ATTCTAGAATCTTCTTGTCG+AGG	+	chr2.1:39436341-39436360	MS.gene99678:CDS	35.0%
!!	TCAGGTAGTTGATTTGATTG+AGG	+	chr2.1:39436222-39436241	MS.gene99678:CDS	35.0%
!!	TTCTAGAATCTTCTTGTCGA+GGG	+	chr2.1:39436342-39436361	MS.gene99678:CDS	35.0%
!!!	AGGTGTTTTTGGTGTAGATA+TGG	+	chr2.1:39436462-39436481	MS.gene99678:CDS	35.0%
!!!	GGTGTTTTTGGTGTAGATAT+GGG	+	chr2.1:39436463-39436482	MS.gene99678:CDS	35.0%
	AGAATGAAGGTCTGAGGATT+GGG	+	chr2.1:39436245-39436264	MS.gene99678:CDS	40.0%
	ATTAGATGAGAGGAAAGAGC+GGG	-	chr2.1:39435918-39435937	None:intergenic	40.0%
	GATTAGATGAGAGGAAAGAG+CGG	-	chr2.1:39435919-39435938	None:intergenic	40.0%
	GGTTGTGGTTGTTACAAATC+AGG	+	chr2.1:39436204-39436223	MS.gene99678:CDS	40.0%
	GTAGATATGGGTCAAAGGAA+TGG	+	chr2.1:39436475-39436494	MS.gene99678:CDS	40.0%
	TACTCACTTACTGGAAATCG+AGG	+	chr2.1:39436032-39436051	MS.gene99678:CDS	40.0%
	TCTTTCCTCTCATCTAATCC+CGG	+	chr2.1:39435920-39435939	MS.gene99678:CDS	40.0%
	TTGGTGTAGATATGGGTCAA+AGG	+	chr2.1:39436470-39436489	MS.gene99678:CDS	40.0%
!	ATTACAGGTGCAGGTGTTTT+TGG	+	chr2.1:39436451-39436470	MS.gene99678:CDS	40.0%
!!	GAGTTTGTTATTACAGGTGC+AGG	+	chr2.1:39436442-39436461	MS.gene99678:CDS	40.0%
!!!	AGTTCGGTCACTGATTTTGT+GGG	-	chr2.1:39435746-39435765	None:intergenic	40.0%
	AAAACCGAGAAATGCAGCGT+AGG	+	chr2.1:39435683-39435702	MS.gene99678:CDS	45.0%
	ACAACCTACGCTGCATTTCT+CGG	-	chr2.1:39435690-39435709	None:intergenic	45.0%
	ACTTGTATTCCTCGGGTAGA+AGG	+	chr2.1:39436278-39436297	MS.gene99678:CDS	45.0%
	CTCTCATCTAATCCCGGAAT+GGG	+	chr2.1:39435926-39435945	MS.gene99678:CDS	45.0%
	CTTGTATTCCTCGGGTAGAA+GGG	+	chr2.1:39436279-39436298	MS.gene99678:CDS	45.0%
	GAGAATGAAGGTCTGAGGAT+TGG	+	chr2.1:39436244-39436263	MS.gene99678:CDS	45.0%
	TAGAATCTTCTTGTCGAGGG+AGG	+	chr2.1:39436345-39436364	MS.gene99678:CDS	45.0%
	TCTTGTCGAGGGAGGAATTT+GGG	+	chr2.1:39436353-39436372	MS.gene99678:CDS	45.0%
	TTCTGGTGGCTTGAAAACGT+TGG	+	chr2.1:39436165-39436184	MS.gene99678:CDS	45.0%
	TTCTTGTCGAGGGAGGAATT+TGG	+	chr2.1:39436352-39436371	MS.gene99678:CDS	45.0%
	TTGAGGAGAATGAAGGTCTG+AGG	+	chr2.1:39436239-39436258	MS.gene99678:CDS	45.0%
!	AGTTTTACCGCTTCCGCTTT+CGG	-	chr2.1:39435774-39435793	None:intergenic	45.0%
!!!	CGCTGCATTTCTCGGTTTTT+TGG	-	chr2.1:39435682-39435701	None:intergenic	45.0%
!!!	GAGTTCGGTCACTGATTTTG+TGG	-	chr2.1:39435747-39435766	None:intergenic	45.0%
!!!	GTTCGGTCACTGATTTTGTG+GGG	-	chr2.1:39435745-39435764	None:intergenic	45.0%
	AAAACGTTGGCGGAGAGGTT+TGG	+	chr2.1:39436178-39436197	MS.gene99678:CDS	50.0%
	AAACGTTGGCGGAGAGGTTT+GGG	+	chr2.1:39436179-39436198	MS.gene99678:CDS	50.0%
	AAATTCCGCGGAGGAAAACG+CGG	-	chr2.1:39435967-39435986	None:intergenic	50.0%
	AAGAGCGGGAGAGTTGTTTG+AGG	-	chr2.1:39435904-39435923	None:intergenic	50.0%
	AGAAGGGTTTGTCCCGCTTT+GGG	+	chr2.1:39436295-39436314	MS.gene99678:CDS	50.0%
	AGCCCATGACAAACCCAAAG+CGG	-	chr2.1:39436311-39436330	None:intergenic	50.0%
	AGGAATTTGGGGAGGGTAGT+AGG	+	chr2.1:39436365-39436384	MS.gene99678:CDS	50.0%
	CAATAGCGAGATGAGCACAG+CGG	+	chr2.1:39435649-39435668	MS.gene99678:CDS	50.0%
	CCATTCCGGGATTAGATGAG+AGG	-	chr2.1:39435928-39435947	None:intergenic	50.0%
	CCTCTCATCTAATCCCGGAA+TGG	+	chr2.1:39435925-39435944	MS.gene99678:CDS	50.0%
	CTGCCTTCAACTCGTTCTCA+TGG	+	chr2.1:39435799-39435818	MS.gene99678:CDS	50.0%
	CTTGTCGAGGGAGGAATTTG+GGG	+	chr2.1:39436354-39436373	MS.gene99678:CDS	50.0%
	TAGAAGGGTTTGTCCCGCTT+TGG	+	chr2.1:39436294-39436313	MS.gene99678:CDS	50.0%
	TCTCCGCAGAGTAAATTCCG+CGG	-	chr2.1:39435979-39435998	None:intergenic	50.0%
	TGGTGGCTTGAAAACGTTGG+CGG	+	chr2.1:39436168-39436187	MS.gene99678:CDS	50.0%
	TGTAGAGTGATGAAGCGGAG+AGG	-	chr2.1:39435850-39435869	None:intergenic	50.0%
!	GAGCCATGAGAACGAGTTGA+AGG	-	chr2.1:39435805-39435824	None:intergenic	50.0%
!	TCCCGCTTTGGGTTTGTCAT+GGG	+	chr2.1:39436306-39436325	MS.gene99678:CDS	50.0%
	AGAGGGTCAGTTCCCATTCC+GGG	-	chr2.1:39435941-39435960	None:intergenic	55.0%
	AGCGGGAGAGTTGTTTGAGG+CGG	-	chr2.1:39435901-39435920	None:intergenic	55.0%
	CCTCCGCGGAATTTACTCTG+CGG	+	chr2.1:39435973-39435992	MS.gene99678:CDS	55.0%
	GAGAGGGTCAGTTCCCATTC+CGG	-	chr2.1:39435942-39435961	None:intergenic	55.0%
	GCCCATGACAAACCCAAAGC+GGG	-	chr2.1:39436310-39436329	None:intergenic	55.0%
	GCTTGAAAACGTTGGCGGAG+AGG	+	chr2.1:39436173-39436192	MS.gene99678:CDS	55.0%
	TCGAGGGAGGAATTTGGGGA+GGG	+	chr2.1:39436358-39436377	MS.gene99678:CDS	55.0%
!	AGTTGTTTGAGGCGGCGGAT+GGG	-	chr2.1:39435893-39435912	None:intergenic	55.0%
!	GTCCCGCTTTGGGTTTGTCA+TGG	+	chr2.1:39436305-39436324	MS.gene99678:CDS	55.0%
!	TGATTTTGTGGGGATGCCGC+CGG	-	chr2.1:39435735-39435754	None:intergenic	55.0%
!!	GCGGATGGGGAAAGGGTATT+CGG	-	chr2.1:39435879-39435898	None:intergenic	55.0%
!!	GGAGAGGTTTGGGTTGGTTG+TGG	+	chr2.1:39436189-39436208	MS.gene99678:CDS	55.0%
	ACCGAACTCGTCGCCGAAAG+CGG	+	chr2.1:39435758-39435777	MS.gene99678:CDS	60.0%
	CCGCAGAGTAAATTCCGCGG+AGG	-	chr2.1:39435976-39435995	None:intergenic	60.0%
	GCGAGGCAGCGATCAAGAAC+GGG	-	chr2.1:39435713-39435732	None:intergenic	60.0%
	GGAGGAAAACGCGGTCGAGA+GGG	-	chr2.1:39435958-39435977	None:intergenic	60.0%
	GGCGAGGCAGCGATCAAGAA+CGG	-	chr2.1:39435714-39435733	None:intergenic	60.0%
	GGGACAAACCCTTCTACCCG+AGG	-	chr2.1:39436290-39436309	None:intergenic	60.0%
	GTCGAGGGAGGAATTTGGGG+AGG	+	chr2.1:39436357-39436376	MS.gene99678:CDS	60.0%
	GTTCTTGATCGCTGCCTCGC+CGG	+	chr2.1:39435713-39435732	MS.gene99678:CDS	60.0%
	GTTGGCGGAGAGGTTTGGGT+TGG	+	chr2.1:39436183-39436202	MS.gene99678:CDS	60.0%
	TCCGCTTTCGGCGACGAGTT+CGG	-	chr2.1:39435762-39435781	None:intergenic	60.0%
!	GAGTTGTTTGAGGCGGCGGA+TGG	-	chr2.1:39435894-39435913	None:intergenic	60.0%
!	GGGAGAGTTGTTTGAGGCGG+CGG	-	chr2.1:39435898-39435917	None:intergenic	60.0%
!	GTTGTTTGAGGCGGCGGATG+GGG	-	chr2.1:39435892-39435911	None:intergenic	60.0%
	CGGAGGAAAACGCGGTCGAG+AGG	-	chr2.1:39435959-39435978	None:intergenic	65.0%
	CTCGTCGCCGAAAGCGGAAG+CGG	+	chr2.1:39435764-39435783	MS.gene99678:CDS	65.0%
	GCTCAGCTTCCACCCTCCCA+CGG	+	chr2.1:39435821-39435840	MS.gene99678:CDS	65.0%
	TGAGGCGGCGGATGGGGAAA+GGG	-	chr2.1:39435886-39435905	None:intergenic	65.0%
	TTGAGGCGGCGGATGGGGAA+AGG	-	chr2.1:39435887-39435906	None:intergenic	65.0%
!	CTCGACCGCGTTTTCCTCCG+CGG	+	chr2.1:39435959-39435978	MS.gene99678:CDS	65.0%
	ATGAAGCGGAGAGGCCGCCG+TGG	-	chr2.1:39435841-39435860	None:intergenic	70.0%
	CAGCTTCCACCCTCCCACGG+CGG	+	chr2.1:39435824-39435843	MS.gene99678:CDS	70.0%
	CTTGATCGCTGCCTCGCCGG+CGG	+	chr2.1:39435716-39435735	MS.gene99678:CDS	70.0%
	TGAAGCGGAGAGGCCGCCGT+GGG	-	chr2.1:39435840-39435859	None:intergenic	70.0%
	TTGTGGGGATGCCGCCGGCG+AGG	-	chr2.1:39435730-39435749	None:intergenic	75.0%
!	AGCGGAGAGGCCGCCGTGGG+AGG	-	chr2.1:39435837-39435856	None:intergenic	80.0%
!	GAGAGGCCGCCGTGGGAGGG+TGG	-	chr2.1:39435833-39435852	None:intergenic	80.0%
!	GCGGAGAGGCCGCCGTGGGA+GGG	-	chr2.1:39435836-39435855	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	39435617	39436504	39435617	ID=MS.gene99678
chr2.1	mRNA	39435617	39436504	39435617	ID=MS.gene99678.t1;Parent=MS.gene99678
chr2.1	exon	39435617	39436504	39435617	ID=MS.gene99678.t1.exon1;Parent=MS.gene99678.t1
chr2.1	CDS	39435617	39436504	39435617	ID=cds.MS.gene99678.t1;Parent=MS.gene99678.t1

Gene Sequence

>MS.gene99678

GTCATATATACTGAAATGAACGATCACAATCACAATAGCGAGATGAGCACAGCGGCGCAGAACCAAAAAACCGAGAAATGCAGCGTAGGTTGTCCCGTTCTTGATCGCTGCCTCGCCGGCGGCATCCCCACAAAATCAGTGACCGAACTCGTCGCCGAAAGCGGAAGCGGTAAAACTCAAATCTGCCTTCAACTCGTTCTCATGGCTCAGCTTCCACCCTCCCACGGCGGCCTCTCCGCTTCATCACTCTACATATTCACCGAATACCCTTTCCCCATCCGCCGCCTCAAACAACTCTCCCGCTCTTTCCTCTCATCTAATCCCGGAATGGGAACTGACCCTCTCGACCGCGTTTTCCTCCGCGGAATTTACTCTGCGGAGAAATTCGTTGAATTTTTACCTGACATTGAGATTTTACTCACTTACTGGAAATCGAGGTTGCGTCCTGTTAGAGTTATCGTAGTTGATTCTATTGCTGCTTTGTTTAGATCTGAATTTGAAAACTCTATGTTGGATCTTAAACGTAGATCGTCCTTGTTTTTCAAGATTTCTGGTGGCTTGAAAACGTTGGCGGAGAGGTTTGGGTTGGTTGTGGTTGTTACAAATCAGGTAGTTGATTTGATTGAGGAGAATGAAGGTCTGAGGATTGGGAATTTTAGTGACTTGTATTCCTCGGGTAGAAGGGTTTGTCCCGCTTTGGGTTTGTCATGGGCTAATTGTGTGAATTCTAGAATCTTCTTGTCGAGGGAGGAATTTGGGGAGGGTAGTAGGAAATTGAGAACATTTAGGGTTGTTTTTGCTCCTCATTTACCTCAATGTTGTTCTGAGTTTGTTATTACAGGTGCAGGTGTTTTTGGTGTAGATATGGGTCAAAGGAATGGTGTATGA

Protein sequence

>MS.gene99678.t1

VIYTEMNDHNHNSEMSTAAQNQKTEKCSVGCPVLDRCLAGGIPTKSVTELVAESGSGKTQICLQLVLMAQLPPSHGGLSASSLYIFTEYPFPIRRLKQLSRSFLSSNPGMGTDPLDRVFLRGIYSAEKFVEFLPDIEILLTYWKSRLRPVRVIVVDSIAALFRSEFENSMLDLKRRSSLFFKISGGLKTLAERFGLVVVVTNQVVDLIEENEGLRIGNFSDLYSSGRRVCPALGLSWANCVNSRIFLSREEFGEGSRKLRTFRVVFAPHLPQCCSEFVITGAGVFGVDMGQRNGV