Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048609.01.T01 | XP_013449713.1 | 96.346 | 301 | 8 | 1 | 1 | 298 | 151 | 451 | 0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048609.01.T01 | Q9LDG2 | 64.36 | 289 | 97 | 3 | 1 | 284 | 163 | 450 | 1.82E-139 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048609.01.T01 | A0A072U2X7 | 96.346 | 301 | 8 | 1 | 1 | 298 | 151 | 451 | 0.0 | 609 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048609.01 | MsG0180005991.01 | 0.800833 | 1.197063e-48 | 5.630029e-46 |
| MsG0080048609.01 | MsG0280006533.01 | 0.802803 | 4.717069e-49 | 2.332330e-46 |
| MsG0080048609.01 | MsG0380014144.01 | 0.808806 | 2.584043e-50 | 1.491723e-47 |
| MsG0080048609.01 | MsG0580024201.01 | 0.810535 | 1.098453e-50 | 6.638167e-48 |
| MsG0080048609.01 | MsG0580024763.01 | 0.818282 | 2.125876e-52 | 1.584434e-49 |
| MsG0080048609.01 | MsG0680032000.01 | 0.806727 | 7.148385e-50 | 3.908739e-47 |
| MsG0080048609.01 | MsG0880044105.01 | 0.805677 | 1.189251e-49 | 6.330644e-47 |
| MsG0080048609.01 | MsG0880047111.01 | 0.802516 | 5.406505e-49 | 2.653524e-46 |
| MsG0080048609.01 | MsG0880047660.01 | 0.819022 | 1.444396e-52 | 1.098864e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048609.01.T01 | MTR_7g094750 | 96.346 | 301 | 8 | 1 | 1 | 298 | 151 | 451 | 0.0 | 609 |
| MsG0080048609.01.T01 | MTR_2g022560 | 62.587 | 286 | 99 | 3 | 1 | 281 | 157 | 439 | 5.98e-136 | 392 |
| MsG0080048609.01.T01 | MTR_7g094750 | 96.629 | 178 | 3 | 1 | 1 | 175 | 151 | 328 | 3.33e-125 | 360 |
| MsG0080048609.01.T01 | MTR_1g058380 | 48.432 | 287 | 139 | 4 | 1 | 283 | 117 | 398 | 2.01e-97 | 293 |
| MsG0080048609.01.T01 | MTR_8g093530 | 44.816 | 299 | 143 | 8 | 1 | 293 | 150 | 432 | 2.85e-78 | 244 |
| MsG0080048609.01.T01 | MTR_7g109550 | 45.296 | 287 | 143 | 4 | 1 | 284 | 197 | 472 | 2.23e-77 | 243 |
| MsG0080048609.01.T01 | MTR_4g126950 | 42.268 | 291 | 157 | 5 | 1 | 286 | 169 | 453 | 3.86e-75 | 237 |
| MsG0080048609.01.T01 | MTR_3g090120 | 43.509 | 285 | 143 | 5 | 1 | 282 | 193 | 462 | 5.15e-74 | 234 |
| MsG0080048609.01.T01 | MTR_0136s0010 | 43.103 | 290 | 150 | 7 | 1 | 282 | 230 | 512 | 1.04e-72 | 233 |
| MsG0080048609.01.T01 | MTR_5g033800 | 41.892 | 296 | 142 | 6 | 1 | 281 | 205 | 485 | 1.44e-72 | 231 |
| MsG0080048609.01.T01 | MTR_7g093450 | 42.667 | 300 | 160 | 7 | 1 | 294 | 308 | 601 | 5.39e-72 | 233 |
| MsG0080048609.01.T01 | MTR_8g069790 | 41.497 | 294 | 146 | 6 | 1 | 281 | 238 | 518 | 9.65e-72 | 230 |
| MsG0080048609.01.T01 | MTR_5g059400 | 40.411 | 292 | 152 | 7 | 1 | 280 | 235 | 516 | 6.93e-70 | 225 |
| MsG0080048609.01.T01 | MTR_1g116130 | 40.411 | 292 | 152 | 7 | 1 | 280 | 235 | 516 | 6.93e-70 | 225 |
| MsG0080048609.01.T01 | MTR_4g121560 | 38.947 | 285 | 164 | 4 | 1 | 280 | 175 | 454 | 2.38e-68 | 220 |
| MsG0080048609.01.T01 | MTR_2g022580 | 73.554 | 121 | 32 | 0 | 1 | 121 | 2 | 122 | 8.53e-66 | 202 |
| MsG0080048609.01.T01 | MTR_5g071350 | 33.226 | 310 | 150 | 10 | 1 | 280 | 118 | 400 | 5.06e-52 | 176 |
| MsG0080048609.01.T01 | MTR_4g014440 | 34.106 | 302 | 165 | 9 | 1 | 282 | 123 | 410 | 1.42e-49 | 169 |
| MsG0080048609.01.T01 | MTR_3g021060 | 34.276 | 283 | 153 | 9 | 1 | 277 | 106 | 361 | 1.62e-49 | 168 |
| MsG0080048609.01.T01 | MTR_3g464570 | 32.534 | 292 | 160 | 10 | 5 | 280 | 3 | 273 | 1.17e-47 | 160 |
| MsG0080048609.01.T01 | MTR_3g464570 | 32.432 | 296 | 163 | 10 | 1 | 280 | 103 | 377 | 5.97e-47 | 162 |
| MsG0080048609.01.T01 | MTR_4g016940 | 33.106 | 293 | 168 | 6 | 2 | 279 | 148 | 427 | 3.89e-46 | 161 |
| MsG0080048609.01.T01 | MTR_3g070900 | 31.864 | 295 | 175 | 7 | 1 | 280 | 167 | 450 | 7.48e-46 | 160 |
| MsG0080048609.01.T01 | MTR_7g070060 | 33.987 | 306 | 160 | 11 | 1 | 282 | 23 | 310 | 1.76e-45 | 156 |
| MsG0080048609.01.T01 | MTR_3g035830 | 34.507 | 284 | 151 | 9 | 1 | 277 | 91 | 346 | 2.35e-45 | 157 |
| MsG0080048609.01.T01 | MTR_7g070060 | 33.882 | 304 | 163 | 10 | 1 | 282 | 125 | 412 | 1.26e-44 | 156 |
| MsG0080048609.01.T01 | MTR_1g050448 | 33.451 | 284 | 164 | 7 | 1 | 279 | 112 | 375 | 1.54e-44 | 155 |
| MsG0080048609.01.T01 | MTR_2g073500 | 32.759 | 290 | 149 | 10 | 1 | 281 | 95 | 347 | 4.74e-44 | 153 |
| MsG0080048609.01.T01 | MTR_3g071650 | 32.203 | 295 | 172 | 10 | 1 | 280 | 150 | 431 | 5.41e-44 | 155 |
| MsG0080048609.01.T01 | MTR_8g463790 | 32.441 | 299 | 165 | 11 | 1 | 281 | 132 | 411 | 1.67e-43 | 154 |
| MsG0080048609.01.T01 | MTR_5g033800 | 42.697 | 178 | 97 | 3 | 1 | 175 | 205 | 380 | 7.53e-43 | 151 |
| MsG0080048609.01.T01 | MTR_5g083260 | 31.864 | 295 | 173 | 10 | 1 | 280 | 144 | 425 | 1.87e-42 | 151 |
| MsG0080048609.01.T01 | MTR_3g021090 | 34.397 | 282 | 150 | 9 | 1 | 275 | 91 | 344 | 2.72e-42 | 150 |
| MsG0080048609.01.T01 | MTR_2g073510 | 34.965 | 286 | 153 | 9 | 1 | 279 | 94 | 353 | 6.90e-42 | 148 |
| MsG0080048609.01.T01 | MTR_7g068920 | 31.741 | 293 | 172 | 7 | 2 | 279 | 142 | 421 | 3.28e-41 | 147 |
| MsG0080048609.01.T01 | MTR_2g091175 | 33.333 | 285 | 158 | 8 | 1 | 280 | 110 | 367 | 8.64e-41 | 145 |
| MsG0080048609.01.T01 | MTR_4g087730 | 32.292 | 288 | 158 | 9 | 1 | 280 | 105 | 363 | 9.02e-41 | 145 |
| MsG0080048609.01.T01 | MTR_4g079700 | 32.394 | 284 | 160 | 9 | 1 | 279 | 107 | 363 | 1.17e-40 | 145 |
| MsG0080048609.01.T01 | MTR_1g112210 | 31.488 | 289 | 162 | 8 | 2 | 279 | 119 | 382 | 1.24e-40 | 145 |
| MsG0080048609.01.T01 | MTR_5g082880 | 31.650 | 297 | 180 | 7 | 1 | 282 | 226 | 514 | 1.52e-40 | 147 |
| MsG0080048609.01.T01 | MTR_2g015720 | 33.099 | 284 | 159 | 9 | 1 | 279 | 101 | 358 | 4.90e-40 | 143 |
| MsG0080048609.01.T01 | MTR_4g014430 | 33.333 | 291 | 169 | 10 | 1 | 279 | 169 | 446 | 8.14e-40 | 144 |
| MsG0080048609.01.T01 | MTR_1g111010 | 32.404 | 287 | 159 | 11 | 1 | 285 | 94 | 347 | 4.13e-39 | 140 |
| MsG0080048609.01.T01 | MTR_1g112210 | 30.796 | 289 | 151 | 8 | 2 | 279 | 119 | 369 | 2.63e-38 | 139 |
| MsG0080048609.01.T01 | MTR_4g088030 | 31.488 | 289 | 159 | 10 | 1 | 280 | 93 | 351 | 1.05e-37 | 137 |
| MsG0080048609.01.T01 | MTR_6g016880 | 32.704 | 318 | 167 | 11 | 1 | 293 | 138 | 433 | 1.75e-36 | 135 |
| MsG0080048609.01.T01 | MTR_5g034810 | 29.210 | 291 | 167 | 9 | 1 | 281 | 93 | 354 | 3.44e-36 | 133 |
| MsG0080048609.01.T01 | MTR_3g109840 | 31.847 | 314 | 157 | 16 | 1 | 283 | 132 | 419 | 3.76e-33 | 126 |
| MsG0080048609.01.T01 | MTR_8g093870 | 30.719 | 306 | 158 | 9 | 1 | 279 | 194 | 472 | 8.83e-33 | 126 |
| MsG0080048609.01.T01 | MTR_3g049330 | 30.796 | 289 | 163 | 9 | 1 | 280 | 91 | 351 | 1.42e-32 | 123 |
| MsG0080048609.01.T01 | MTR_4g092830 | 29.568 | 301 | 175 | 10 | 1 | 280 | 109 | 393 | 3.42e-31 | 121 |
| MsG0080048609.01.T01 | MTR_4g125060 | 31.379 | 290 | 169 | 9 | 5 | 279 | 197 | 471 | 4.33e-31 | 121 |
| MsG0080048609.01.T01 | MTR_4g125060 | 31.271 | 291 | 168 | 10 | 5 | 279 | 236 | 510 | 6.61e-31 | 121 |
| MsG0080048609.01.T01 | MTR_4g125060 | 31.379 | 290 | 169 | 9 | 5 | 279 | 265 | 539 | 6.69e-31 | 121 |
| MsG0080048609.01.T01 | MTR_7g033230 | 29.653 | 317 | 166 | 14 | 1 | 285 | 324 | 615 | 1.07e-29 | 118 |
| MsG0080048609.01.T01 | MTR_7g033230 | 29.653 | 317 | 166 | 14 | 1 | 285 | 394 | 685 | 1.78e-29 | 118 |
| MsG0080048609.01.T01 | MTR_7g019120 | 29.195 | 298 | 176 | 13 | 1 | 279 | 139 | 420 | 3.34e-28 | 113 |
| MsG0080048609.01.T01 | MTR_5g035150 | 30.065 | 306 | 168 | 15 | 1 | 279 | 145 | 431 | 5.50e-28 | 112 |
| MsG0080048609.01.T01 | MTR_6g061710 | 27.885 | 312 | 189 | 9 | 1 | 290 | 227 | 524 | 6.23e-28 | 113 |
| MsG0080048609.01.T01 | MTR_1g076690 | 29.316 | 307 | 176 | 10 | 1 | 282 | 283 | 573 | 7.57e-28 | 113 |
| MsG0080048609.01.T01 | MTR_6g016875 | 30.872 | 298 | 174 | 12 | 1 | 279 | 124 | 408 | 1.08e-27 | 111 |
| MsG0080048609.01.T01 | MTR_8g104970 | 29.936 | 314 | 171 | 16 | 1 | 286 | 180 | 472 | 1.20e-27 | 112 |
| MsG0080048609.01.T01 | MTR_5g035090 | 30.065 | 306 | 170 | 17 | 1 | 281 | 143 | 429 | 6.34e-27 | 109 |
| MsG0080048609.01.T01 | MTR_6g007777 | 27.815 | 302 | 180 | 13 | 1 | 282 | 177 | 460 | 1.06e-26 | 109 |
| MsG0080048609.01.T01 | MTR_6g016240 | 28.082 | 292 | 167 | 11 | 12 | 279 | 144 | 416 | 3.28e-26 | 107 |
| MsG0080048609.01.T01 | MTR_8g027900 | 30.769 | 299 | 175 | 13 | 1 | 280 | 271 | 556 | 5.79e-26 | 107 |
| MsG0080048609.01.T01 | MTR_5g035080 | 29.808 | 312 | 164 | 17 | 1 | 281 | 135 | 422 | 3.29e-25 | 104 |
| MsG0080048609.01.T01 | MTR_5g035140 | 31.395 | 258 | 139 | 13 | 58 | 288 | 28 | 274 | 3.60e-25 | 102 |
| MsG0080048609.01.T01 | MTR_2g016060 | 28.571 | 301 | 175 | 13 | 5 | 281 | 118 | 402 | 9.33e-25 | 103 |
| MsG0080048609.01.T01 | MTR_5g069320 | 28.082 | 292 | 124 | 11 | 1 | 272 | 161 | 386 | 1.02e-24 | 102 |
| MsG0080048609.01.T01 | MTR_5g035070 | 31.561 | 301 | 174 | 13 | 1 | 281 | 147 | 435 | 4.56e-23 | 98.6 |
| MsG0080048609.01.T01 | MTR_8g099300 | 28.333 | 300 | 182 | 12 | 1 | 280 | 134 | 420 | 2.44e-22 | 96.7 |
| MsG0080048609.01.T01 | MTR_7g070060 | 33.333 | 183 | 104 | 5 | 1 | 175 | 125 | 297 | 6.98e-22 | 93.6 |
| MsG0080048609.01.T01 | MTR_3g021150 | 36.508 | 126 | 66 | 3 | 136 | 259 | 1 | 114 | 1.66e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048609.01.T01 | AT3G06080 | 64.360 | 289 | 97 | 3 | 1 | 284 | 163 | 450 | 1.86e-140 | 404 |
| MsG0080048609.01.T01 | AT5G19160 | 62.245 | 294 | 102 | 4 | 1 | 286 | 159 | 451 | 8.05e-137 | 395 |
| MsG0080048609.01.T01 | AT5G06230 | 52.613 | 287 | 121 | 5 | 1 | 280 | 87 | 365 | 1.29e-101 | 302 |
| MsG0080048609.01.T01 | AT5G06230 | 52.613 | 287 | 121 | 5 | 1 | 280 | 128 | 406 | 3.84e-101 | 302 |
| MsG0080048609.01.T01 | AT3G11570 | 50.704 | 284 | 131 | 5 | 1 | 280 | 142 | 420 | 1.29e-97 | 294 |
| MsG0080048609.01.T01 | AT3G06080 | 70.225 | 178 | 50 | 1 | 1 | 175 | 163 | 340 | 1.12e-88 | 268 |
| MsG0080048609.01.T01 | AT5G19160 | 67.416 | 178 | 55 | 1 | 1 | 175 | 159 | 336 | 1.84e-88 | 268 |
| MsG0080048609.01.T01 | AT3G62390 | 45.105 | 286 | 146 | 4 | 1 | 283 | 198 | 475 | 8.98e-78 | 244 |
| MsG0080048609.01.T01 | AT5G20590 | 44.718 | 284 | 148 | 4 | 1 | 280 | 202 | 480 | 6.56e-76 | 240 |
| MsG0080048609.01.T01 | AT1G60790 | 41.751 | 297 | 143 | 5 | 1 | 281 | 252 | 534 | 2.56e-75 | 240 |
| MsG0080048609.01.T01 | AT1G48880 | 44.561 | 285 | 138 | 4 | 1 | 282 | 175 | 442 | 2.76e-75 | 237 |
| MsG0080048609.01.T01 | AT5G06230 | 57.143 | 182 | 75 | 1 | 1 | 179 | 128 | 309 | 3.00e-72 | 225 |
| MsG0080048609.01.T01 | AT3G12060 | 39.934 | 303 | 161 | 5 | 1 | 287 | 256 | 553 | 1.77e-70 | 228 |
| MsG0080048609.01.T01 | AT5G06700 | 40.972 | 288 | 155 | 5 | 1 | 280 | 315 | 595 | 6.08e-70 | 228 |
| MsG0080048609.01.T01 | AT5G49340 | 39.249 | 293 | 155 | 8 | 1 | 280 | 160 | 442 | 9.82e-64 | 207 |
| MsG0080048609.01.T01 | AT1G78710 | 35.315 | 286 | 154 | 9 | 1 | 280 | 97 | 357 | 2.06e-50 | 170 |
| MsG0080048609.01.T01 | AT3G62390 | 46.927 | 179 | 90 | 2 | 1 | 176 | 198 | 374 | 8.86e-49 | 167 |
| MsG0080048609.01.T01 | AT2G30010 | 34.783 | 299 | 157 | 11 | 1 | 280 | 118 | 397 | 1.17e-48 | 167 |
| MsG0080048609.01.T01 | AT2G30010 | 34.783 | 299 | 157 | 11 | 1 | 280 | 161 | 440 | 1.66e-48 | 167 |
| MsG0080048609.01.T01 | AT1G73140 | 34.884 | 301 | 155 | 12 | 1 | 281 | 128 | 407 | 2.13e-48 | 166 |
| MsG0080048609.01.T01 | AT5G58600 | 34.000 | 300 | 153 | 11 | 1 | 280 | 127 | 401 | 5.15e-48 | 165 |
| MsG0080048609.01.T01 | AT3G11030 | 33.221 | 298 | 166 | 11 | 1 | 280 | 167 | 449 | 3.55e-47 | 164 |
| MsG0080048609.01.T01 | AT2G40160 | 31.773 | 299 | 179 | 8 | 1 | 283 | 138 | 427 | 5.55e-47 | 163 |
| MsG0080048609.01.T01 | AT2G38320 | 32.450 | 302 | 166 | 11 | 1 | 280 | 37 | 322 | 1.05e-46 | 160 |
| MsG0080048609.01.T01 | AT2G38320 | 32.450 | 302 | 166 | 11 | 1 | 280 | 120 | 405 | 6.04e-46 | 160 |
| MsG0080048609.01.T01 | AT2G40160 | 30.872 | 298 | 181 | 8 | 1 | 282 | 138 | 426 | 1.61e-45 | 159 |
| MsG0080048609.01.T01 | AT1G29050 | 34.155 | 284 | 156 | 7 | 1 | 279 | 121 | 378 | 2.45e-45 | 157 |
| MsG0080048609.01.T01 | AT3G55990 | 33.667 | 300 | 167 | 9 | 1 | 282 | 201 | 486 | 1.30e-44 | 158 |
| MsG0080048609.01.T01 | AT2G34070 | 34.737 | 285 | 154 | 9 | 1 | 279 | 125 | 383 | 2.47e-44 | 155 |
| MsG0080048609.01.T01 | AT2G40150 | 31.561 | 301 | 180 | 6 | 1 | 283 | 132 | 424 | 1.94e-43 | 154 |
| MsG0080048609.01.T01 | AT5G20590 | 43.258 | 178 | 97 | 2 | 1 | 175 | 202 | 378 | 4.29e-43 | 152 |
| MsG0080048609.01.T01 | AT5G01360 | 31.757 | 296 | 169 | 7 | 2 | 279 | 98 | 378 | 5.70e-43 | 151 |
| MsG0080048609.01.T01 | AT2G34070 | 34.545 | 275 | 148 | 9 | 11 | 279 | 1 | 249 | 6.06e-43 | 148 |
| MsG0080048609.01.T01 | AT2G30900 | 32.753 | 287 | 154 | 9 | 5 | 280 | 108 | 366 | 1.00e-42 | 150 |
| MsG0080048609.01.T01 | AT5G01360 | 31.864 | 295 | 170 | 7 | 2 | 279 | 154 | 434 | 1.61e-42 | 151 |
| MsG0080048609.01.T01 | AT5G01620 | 34.539 | 304 | 148 | 13 | 1 | 279 | 172 | 449 | 2.19e-42 | 151 |
| MsG0080048609.01.T01 | AT5G01620 | 34.539 | 304 | 148 | 13 | 1 | 279 | 172 | 449 | 2.19e-42 | 151 |
| MsG0080048609.01.T01 | AT5G01620 | 34.539 | 304 | 148 | 13 | 1 | 279 | 180 | 457 | 3.15e-42 | 151 |
| MsG0080048609.01.T01 | AT2G40320 | 29.966 | 297 | 176 | 11 | 1 | 280 | 142 | 423 | 7.14e-40 | 144 |
| MsG0080048609.01.T01 | AT3G54260 | 30.928 | 291 | 165 | 8 | 1 | 280 | 110 | 375 | 7.68e-39 | 140 |
| MsG0080048609.01.T01 | AT1G01430 | 33.548 | 310 | 162 | 13 | 1 | 283 | 159 | 451 | 2.94e-38 | 140 |
| MsG0080048609.01.T01 | AT2G42570 | 29.825 | 285 | 169 | 8 | 1 | 280 | 107 | 365 | 7.46e-38 | 137 |
| MsG0080048609.01.T01 | AT3G14850 | 29.965 | 287 | 171 | 8 | 1 | 281 | 94 | 356 | 3.48e-37 | 135 |
| MsG0080048609.01.T01 | AT3G14850 | 30.325 | 277 | 163 | 8 | 11 | 281 | 1 | 253 | 1.65e-36 | 131 |
| MsG0080048609.01.T01 | AT5G64470 | 32.890 | 301 | 165 | 11 | 1 | 280 | 117 | 401 | 3.62e-36 | 134 |
| MsG0080048609.01.T01 | AT2G31110 | 31.579 | 285 | 162 | 10 | 1 | 279 | 105 | 362 | 5.34e-36 | 132 |
| MsG0080048609.01.T01 | AT5G64470 | 32.550 | 298 | 164 | 11 | 1 | 280 | 117 | 395 | 1.38e-34 | 129 |
| MsG0080048609.01.T01 | AT1G70230 | 32.441 | 299 | 166 | 12 | 1 | 284 | 139 | 416 | 1.83e-34 | 129 |
| MsG0080048609.01.T01 | AT5G20680 | 31.000 | 300 | 165 | 12 | 1 | 279 | 179 | 457 | 4.40e-33 | 126 |
| MsG0080048609.01.T01 | AT5G20680 | 31.000 | 300 | 165 | 12 | 1 | 279 | 273 | 551 | 5.95e-33 | 127 |
| MsG0080048609.01.T01 | AT5G20680 | 31.000 | 300 | 165 | 12 | 1 | 279 | 273 | 551 | 5.95e-33 | 127 |
| MsG0080048609.01.T01 | AT5G20680 | 31.000 | 300 | 165 | 12 | 1 | 279 | 273 | 551 | 5.95e-33 | 127 |
| MsG0080048609.01.T01 | AT5G20680 | 31.000 | 300 | 165 | 12 | 1 | 279 | 273 | 551 | 5.95e-33 | 127 |
| MsG0080048609.01.T01 | AT5G20680 | 31.000 | 300 | 165 | 12 | 1 | 279 | 255 | 533 | 6.49e-33 | 127 |
| MsG0080048609.01.T01 | AT5G15890 | 31.438 | 299 | 162 | 12 | 1 | 279 | 247 | 522 | 3.13e-32 | 125 |
| MsG0080048609.01.T01 | AT2G14530 | 30.225 | 311 | 169 | 12 | 1 | 285 | 124 | 412 | 5.07e-31 | 120 |
| MsG0080048609.01.T01 | AT1G78710 | 30.389 | 283 | 119 | 10 | 1 | 280 | 90 | 297 | 7.16e-30 | 115 |
| MsG0080048609.01.T01 | AT5G51640 | 27.795 | 331 | 175 | 13 | 1 | 294 | 198 | 501 | 2.47e-29 | 117 |
| MsG0080048609.01.T01 | AT4G01080 | 31.023 | 303 | 170 | 12 | 1 | 283 | 151 | 434 | 3.65e-29 | 115 |
| MsG0080048609.01.T01 | AT3G02440 | 30.333 | 300 | 176 | 10 | 1 | 282 | 195 | 479 | 8.85e-29 | 115 |
| MsG0080048609.01.T01 | AT3G02440 | 30.333 | 300 | 176 | 10 | 1 | 282 | 187 | 471 | 1.04e-28 | 115 |
| MsG0080048609.01.T01 | AT5G64020 | 29.653 | 317 | 159 | 13 | 1 | 279 | 118 | 408 | 1.28e-28 | 114 |
| MsG0080048609.01.T01 | AT2G31110 | 31.579 | 228 | 132 | 7 | 57 | 279 | 6 | 214 | 3.43e-28 | 108 |
| MsG0080048609.01.T01 | AT4G25360 | 28.438 | 320 | 172 | 13 | 1 | 286 | 235 | 531 | 5.33e-28 | 113 |
| MsG0080048609.01.T01 | AT4G25360 | 28.438 | 320 | 172 | 13 | 1 | 286 | 235 | 531 | 5.33e-28 | 113 |
| MsG0080048609.01.T01 | AT5G15900 | 29.642 | 307 | 170 | 12 | 1 | 283 | 129 | 413 | 1.25e-27 | 111 |
| MsG0080048609.01.T01 | AT5G15900 | 29.642 | 307 | 170 | 12 | 1 | 283 | 148 | 432 | 1.69e-27 | 111 |
| MsG0080048609.01.T01 | AT4G11090 | 29.431 | 299 | 180 | 11 | 1 | 280 | 140 | 426 | 1.15e-26 | 108 |
| MsG0080048609.01.T01 | AT5G58600 | 32.787 | 183 | 93 | 7 | 1 | 173 | 127 | 289 | 2.39e-25 | 102 |
| MsG0080048609.01.T01 | AT4G23790 | 30.000 | 300 | 179 | 11 | 1 | 280 | 140 | 428 | 3.13e-25 | 104 |
| MsG0080048609.01.T01 | AT2G40160 | 28.962 | 183 | 114 | 5 | 1 | 175 | 138 | 312 | 1.15e-21 | 93.2 |
| MsG0080048609.01.T01 | AT3G28150 | 29.333 | 300 | 172 | 16 | 1 | 279 | 130 | 410 | 5.03e-21 | 92.8 |
| MsG0080048609.01.T01 | AT5G64470 | 33.838 | 198 | 108 | 8 | 1 | 185 | 117 | 304 | 7.64e-20 | 88.2 |
| MsG0080048609.01.T01 | AT5G64470 | 33.838 | 198 | 108 | 8 | 1 | 185 | 117 | 304 | 7.72e-20 | 88.2 |
| MsG0080048609.01.T01 | AT2G37720 | 26.603 | 312 | 163 | 10 | 1 | 279 | 204 | 482 | 2.57e-19 | 88.2 |
| MsG0080048609.01.T01 | AT2G30900 | 29.341 | 167 | 100 | 5 | 5 | 167 | 108 | 260 | 2.05e-17 | 80.9 |
| MsG0080048609.01.T01 | AT2G31110 | 26.901 | 171 | 108 | 5 | 1 | 168 | 105 | 261 | 9.25e-13 | 67.4 |
Find 74 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATGCTCCTGTCCATTTC+AGG | 0.199718 | contig374end:-3616 | MsG0080048609.01.T01:intron |
| CTCCTCATGGGGCACCTTAC+CGG | 0.208657 | contig374end:-4238 | MsG0080048609.01.T01:CDS |
| TCTTCACTTCCTCCCCTATT+TGG | 0.229817 | contig374end:+3741 | None:intergenic |
| AAGCCTGTGTGCTTTGTAAT+TGG | 0.240652 | contig374end:+4338 | None:intergenic |
| TAGGGTTGTTACTTCCAAAT+AGG | 0.244168 | contig374end:-3755 | MsG0080048609.01.T01:CDS |
| TACAAAGCACACAGGCTTCT+TGG | 0.292555 | contig374end:-4333 | MsG0080048609.01.T01:CDS |
| CATGCATCTATTTACTATAT+CGG | 0.301572 | contig374end:-2442 | MsG0080048609.01.T01:CDS |
| AGCTCTGTCTATGAGGTTAA+TGG | 0.310475 | contig374end:-4365 | MsG0080048609.01.T01:CDS |
| GACTTTGAGGGTTGATCATA+TGG | 0.322630 | contig374end:-4207 | MsG0080048609.01.T01:CDS |
| ATAGAGGCTGGGCCCTTGTC+TGG | 0.326336 | contig374end:+2418 | None:intergenic |
| AAGAATATCGTTCCACGAAT+CGG | 0.343996 | contig374end:+2354 | None:intergenic |
| CAGTTGAGACAGTAGTTGAT+TGG | 0.345039 | contig374end:-3685 | MsG0080048609.01.T01:CDS |
| TCGGAAACACTACCTGATTT+AGG | 0.352974 | contig374end:-2598 | MsG0080048609.01.T01:CDS |
| AGGGTTGTTACTTCCAAATA+GGG | 0.359921 | contig374end:-3754 | MsG0080048609.01.T01:CDS |
| AAATTTAGACAAACCTGAAA+TGG | 0.377734 | contig374end:+3603 | None:intergenic |
| AGGGGTGGTGACTGGAATAC+TGG | 0.380022 | contig374end:-2634 | MsG0080048609.01.T01:CDS |
| GATGTGTTGGTTCTCAATGC+TGG | 0.385997 | contig374end:-4155 | MsG0080048609.01.T01:CDS |
| GCTCTGTCTATGAGGTTAAT+GGG | 0.404836 | contig374end:-4364 | MsG0080048609.01.T01:CDS |
| CCGGGTAAAATTGACTTTGA+GGG | 0.407159 | contig374end:-4219 | MsG0080048609.01.T01:CDS |
| AGAATATCGTTCCACGAATC+GGG | 0.409551 | contig374end:+2355 | None:intergenic |
| TCTTGTCGCTGCATAGAGGC+TGG | 0.413274 | contig374end:+2406 | None:intergenic |
| TCCTCATGGGGCACCTTACC+GGG | 0.416311 | contig374end:-4237 | MsG0080048609.01.T01:CDS |
| TTCTCAATGCTGGGCATTGG+TGG | 0.427971 | contig374end:-4145 | MsG0080048609.01.T01:CDS |
| GCAGGCACAGAGCCTAAATC+AGG | 0.428532 | contig374end:+2586 | None:intergenic |
| TCCCTGGTGTTCCCGATTCG+TGG | 0.429355 | contig374end:-2366 | MsG0080048609.01.T01:CDS |
| GGATTGCCCGTGAAGTAAAC+AGG | 0.441300 | contig374end:-3664 | MsG0080048609.01.T01:CDS |
| AGCCTGTGTGCTTTGTAATT+GGG | 0.443643 | contig374end:+4339 | None:intergenic |
| ATGCATCTATTTACTATATC+GGG | 0.447777 | contig374end:-2441 | MsG0080048609.01.T01:CDS |
| TACTGGTGGTGGTTGTCATT+CGG | 0.449065 | contig374end:-2617 | MsG0080048609.01.T01:CDS |
| TGCAAGGACGGCCTCCTCAT+GGG | 0.454477 | contig374end:-4250 | MsG0080048609.01.T01:CDS |
| ATATGGACTGGACTTCTCAT+AGG | 0.456261 | contig374end:-4190 | MsG0080048609.01.T01:CDS |
| GTGCAAGGACGGCCTCCTCA+TGG | 0.472807 | contig374end:-4251 | MsG0080048609.01.T01:CDS |
| ACCGGGTAAAATTGACTTTG+AGG | 0.476150 | contig374end:-4220 | MsG0080048609.01.T01:CDS |
| TTTGTTCCTGTTTACTTCAC+GGG | 0.476371 | contig374end:+3658 | None:intergenic |
| TGTAGCCATTGGTGTCTCCC+TGG | 0.487058 | contig374end:-2382 | MsG0080048609.01.T01:CDS |
| GATGTATCAGGGGTGGTGAC+TGG | 0.488199 | contig374end:-2642 | MsG0080048609.01.T01:intron |
| TGGTTCTCAATGCTGGGCAT+TGG | 0.493620 | contig374end:-4148 | MsG0080048609.01.T01:CDS |
| CAGGAGCATAAGTTCGGAAA+AGG | 0.503608 | contig374end:+3627 | None:intergenic |
| TGCTCTTCTTCTCAAGAGGA+AGG | 0.505400 | contig374end:-2329 | MsG0080048609.01.T01:CDS |
| CTTGTCGCTGCATAGAGGCT+GGG | 0.506338 | contig374end:+2407 | None:intergenic |
| TTCCACGAATCGGGAACACC+AGG | 0.517793 | contig374end:+2364 | None:intergenic |
| AAACAAGAGCTCTGTCTATG+AGG | 0.526156 | contig374end:-4372 | MsG0080048609.01.T01:CDS |
| TTACTATATCGGGCCAGACA+AGG | 0.528172 | contig374end:-2431 | MsG0080048609.01.T01:CDS |
| TACTATATCGGGCCAGACAA+GGG | 0.530919 | contig374end:-2430 | MsG0080048609.01.T01:CDS |
| ATGTGTTGGTTCTCAATGCT+GGG | 0.532135 | contig374end:-4154 | MsG0080048609.01.T01:CDS |
| ACTGCACTGTTGAATACTAC+AGG | 0.545690 | contig374end:-4289 | MsG0080048609.01.T01:CDS |
| AAATGAATGTCGGAGAGTGC+AGG | 0.550404 | contig374end:+2568 | None:intergenic |
| TTGTTGGTGATTCGATTGGA+AGG | 0.550931 | contig374end:-4439 | MsG0080048609.01.T01:CDS |
| GCAAGGACGGCCTCCTCATG+GGG | 0.555175 | contig374end:-4249 | MsG0080048609.01.T01:CDS |
| AATGGACAGGAGCATAAGTT+CGG | 0.556094 | contig374end:+3621 | None:intergenic |
| TAGACAAACCTGAAATGGAC+AGG | 0.558652 | contig374end:+3608 | None:intergenic |
| TTTATGCTCTTCTTCTCAAG+AGG | 0.558774 | contig374end:-2333 | MsG0080048609.01.T01:CDS |
| ATTCGATTGGAAGGAACCAA+TGG | 0.563465 | contig374end:-4430 | MsG0080048609.01.T01:CDS |
| TTCGATTGGAAGGAACCAAT+GGG | 0.567005 | contig374end:-4429 | MsG0080048609.01.T01:CDS |
| TACAGAGAAGTGATTCCCAT+TGG | 0.569163 | contig374end:+4414 | None:intergenic |
| GGTGACTGGAATACTGGTGG+TGG | 0.575571 | contig374end:-2628 | MsG0080048609.01.T01:CDS |
| ATGTCGGCACGCAGGAAAGA+CGG | 0.587537 | contig374end:-2466 | MsG0080048609.01.T01:CDS |
| GGGTTGTTACTTCCAAATAG+GGG | 0.589199 | contig374end:-3753 | MsG0080048609.01.T01:CDS |
| CGGTAAGGTGCCCCATGAGG+AGG | 0.592296 | contig374end:+4239 | None:intergenic |
| GCTTAATGTCACACAAATGT+CGG | 0.593319 | contig374end:-2482 | MsG0080048609.01.T01:CDS |
| TGAGGGTTGATCATATGGAC+TGG | 0.593986 | contig374end:-4202 | MsG0080048609.01.T01:CDS |
| ACAGTCTTGTCGCTGCATAG+AGG | 0.605304 | contig374end:+2402 | None:intergenic |
| AGCGACAAGACTGTAGCCAT+TGG | 0.611329 | contig374end:-2393 | MsG0080048609.01.T01:CDS |
| GTGGAGAGATGCAGATGTGT+TGG | 0.620711 | contig374end:-4168 | MsG0080048609.01.T01:CDS |
| TGGACTGGACTTCTCATAGG+TGG | 0.622128 | contig374end:-4187 | MsG0080048609.01.T01:CDS |
| GAACACCAGGGAGACACCAA+TGG | 0.632544 | contig374end:+2377 | None:intergenic |
| TTGTTACTTCCAAATAGGGG+AGG | 0.639186 | contig374end:-3750 | MsG0080048609.01.T01:CDS |
| CGCGCGTTGTGACAAGACAT+TGG | 0.640121 | contig374end:+2534 | None:intergenic |
| GGTGGTGACTGGAATACTGG+TGG | 0.654167 | contig374end:-2631 | MsG0080048609.01.T01:CDS |
| ACCCGGTAAGGTGCCCCATG+AGG | 0.655850 | contig374end:+4236 | None:intergenic |
| TCACACAAATGTCGGCACGC+AGG | 0.675220 | contig374end:-2474 | MsG0080048609.01.T01:CDS |
| GACAGTACTGAAATGAATGT+CGG | 0.678806 | contig374end:+2558 | None:intergenic |
| AACCCAATTACAAAGCACAC+AGG | 0.699405 | contig374end:-4341 | MsG0080048609.01.T01:CDS |
| TCCACGAATCGGGAACACCA+GGG | 0.710801 | contig374end:+2365 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATAAAGATAAA+AGG | + | contig374end:3196-3215 | None:intergenic | 10.0% |
| !! | AAAATCAAATAAAGATAAAA+GGG | + | contig374end:3195-3214 | None:intergenic | 10.0% |
| !! | ACTGATAATAATTTGAAAAA+TGG | - | contig374end:3312-3331 | MsG0080048609.01.T01:intron | 15.0% |
| !! | ATAATAATTTGAAAAATGGA+AGG | - | contig374end:3316-3335 | MsG0080048609.01.T01:intron | 15.0% |
| !! | TAAATACTTAAACACATATA+GGG | + | contig374end:2925-2944 | None:intergenic | 15.0% |
| !! | TTAAATACTTAAACACATAT+AGG | + | contig374end:2926-2945 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTATGTTTGTT+CGG | - | contig374end:2661-2680 | MsG0080048609.01.T01:intron | 15.0% |
| !! | AAGTTGTCATTAAAAACATT+TGG | - | contig374end:3746-3765 | MsG0080048609.01.T01:CDS | 20.0% |
| !! | AGTTGTCATTAAAAACATTT+GGG | - | contig374end:3747-3766 | MsG0080048609.01.T01:CDS | 20.0% |
| !! | TTCATAGCTAATATATTTAC+TGG | + | contig374end:3253-3272 | None:intergenic | 20.0% |
| !!! | ATAAAATCCTTACATTTTGA+CGG | + | contig374end:2649-2668 | None:intergenic | 20.0% |
| !!! | TATAAAGCACAACTTAATTT+TGG | + | contig374end:3881-3900 | None:intergenic | 20.0% |
| ! | AAATTTAGACAAACCTGAAA+TGG | + | contig374end:3155-3174 | None:intergenic | 25.0% |
| ! | AAGACATTAATCATGTGATT+AGG | - | contig374end:2737-2756 | MsG0080048609.01.T01:intron | 25.0% |
| ! | AGACATTAATCATGTGATTA+GGG | - | contig374end:2738-2757 | MsG0080048609.01.T01:intron | 25.0% |
| ! | AGTTCAAAATATAACCGTTT+AGG | - | contig374end:3833-3852 | MsG0080048609.01.T01:intron | 25.0% |
| ! | ATGCATCTATTTACTATATC+GGG | - | contig374end:4314-4333 | MsG0080048609.01.T01:CDS | 25.0% |
| ! | ATTATATGTGAGTTTGATGT+TGG | - | contig374end:2962-2981 | MsG0080048609.01.T01:intron | 25.0% |
| ! | ATTTAAACAGAGCATAAAGA+TGG | + | contig374end:2855-2874 | None:intergenic | 25.0% |
| ! | CATGCATCTATTTACTATAT+CGG | - | contig374end:4313-4332 | MsG0080048609.01.T01:CDS | 25.0% |
| ! | GCTATAAAGAATATTAGGAT+TGG | - | contig374end:3420-3439 | MsG0080048609.01.T01:intron | 25.0% |
| ! | GTTGTCATTAAAAACATTTG+GGG | - | contig374end:3748-3767 | MsG0080048609.01.T01:CDS | 25.0% |
| ! | TCAAATAAAGATAAAAGGGA+AGG | + | contig374end:3191-3210 | None:intergenic | 25.0% |
| ! | TCAGTGCTATAAAGAATATT+AGG | - | contig374end:3415-3434 | MsG0080048609.01.T01:intron | 25.0% |
| ! | TTGTGCTTTATAATAACCAA+CGG | - | contig374end:3889-3908 | MsG0080048609.01.T01:intron | 25.0% |
| ! | TTTAAACAGAGCATAAAGAT+GGG | + | contig374end:2854-2873 | None:intergenic | 25.0% |
| !! | AGAATATTAGGATTGGTAAA+AGG | - | contig374end:3427-3446 | MsG0080048609.01.T01:intron | 25.0% |
| !! | CTTGGTAATACTAATGTTAA+TGG | - | contig374end:3957-3976 | MsG0080048609.01.T01:intron | 25.0% |
| !! | TTTTATCAATGTAGAGAATC+TGG | - | contig374end:3702-3721 | MsG0080048609.01.T01:CDS | 25.0% |
| !!! | AACAAACGATTAGTTTTTGT+TGG | - | contig374end:2300-2319 | MsG0080048609.01.T01:CDS | 25.0% |
| !!! | TGGTCTTATTTTATTGCTTA+GGG | - | contig374end:2982-3001 | MsG0080048609.01.T01:intron | 25.0% |
| !!! | TTGGTCTTATTTTATTGCTT+AGG | - | contig374end:2981-3000 | MsG0080048609.01.T01:intron | 25.0% |
| ATCAACGACAAATAATGGTA+AGG | + | contig374end:4096-4115 | None:intergenic | 30.0% | |
| ATTAATCATGTGATTAGGGT+GGG | - | contig374end:2742-2761 | MsG0080048609.01.T01:intron | 30.0% | |
| ATTCTACTCGTTATCCTAAA+CGG | + | contig374end:3850-3869 | None:intergenic | 30.0% | |
| CGACAATTCAATCTTTAACA+AGG | - | contig374end:2703-2722 | MsG0080048609.01.T01:intron | 30.0% | |
| GATACATCAACGACAAATAA+TGG | + | contig374end:4101-4120 | None:intergenic | 30.0% | |
| TATATTTACTGGAGAAGAAG+TGG | + | contig374end:3242-3261 | None:intergenic | 30.0% | |
| TATGCTCTGTTTAAATCCTT+GGG | - | contig374end:2859-2878 | MsG0080048609.01.T01:intron | 30.0% | |
| TATTTGTCGTTGATGTATCA+GGG | - | contig374end:4102-4121 | MsG0080048609.01.T01:intron | 30.0% | |
| TTATGCTCTGTTTAAATCCT+TGG | - | contig374end:2858-2877 | MsG0080048609.01.T01:intron | 30.0% | |
| TTATTTGTCGTTGATGTATC+AGG | - | contig374end:4101-4120 | MsG0080048609.01.T01:intron | 30.0% | |
| TTGAATGTAATCACACATGT+TGG | - | contig374end:3342-3361 | MsG0080048609.01.T01:intron | 30.0% | |
| ! | ATTTCAATTGAAGGCATGTT+CGG | + | contig374end:3394-3413 | None:intergenic | 30.0% |
| ! | TTTTGTTCCTGTTTACTTCA+CGG | + | contig374end:3101-3120 | None:intergenic | 30.0% |
| !! | GAGAAACTTTTGTTGTATTG+CGG | + | contig374end:4462-4481 | None:intergenic | 30.0% |
| !! | TACTTTGAAATAGCTTATGC+AGG | - | contig374end:3674-3693 | MsG0080048609.01.T01:CDS | 30.0% |
| !!! | TACTGCATAGCTTTTTTTAG+AGG | - | contig374end:3478-3497 | MsG0080048609.01.T01:intron | 30.0% |
| AAAAGGAATTCCCTAAGAAG+TGG | + | contig374end:3606-3625 | None:intergenic | 35.0% | |
| AAGAATATCGTTCCACGAAT+CGG | + | contig374end:4404-4423 | None:intergenic | 35.0% | |
| ACAGAACTTTCCACTTCTTA+GGG | - | contig374end:3593-3612 | MsG0080048609.01.T01:intron | 35.0% | |
| ATTAACCTCAGATCCAAACA+TGG | - | contig374end:3933-3952 | MsG0080048609.01.T01:intron | 35.0% | |
| ATTTGTCGTTGATGTATCAG+GGG | - | contig374end:4103-4122 | MsG0080048609.01.T01:intron | 35.0% | |
| CATTAATCATGTGATTAGGG+TGG | - | contig374end:2741-2760 | MsG0080048609.01.T01:intron | 35.0% | |
| GCTTAATGTCACACAAATGT+CGG | - | contig374end:4273-4292 | MsG0080048609.01.T01:CDS | 35.0% | |
| TATCAATGTAGAGAATCTGG+AGG | - | contig374end:3705-3724 | MsG0080048609.01.T01:CDS | 35.0% | |
| TCTTGCTCAGTATATTGATC+TGG | - | contig374end:4063-4082 | MsG0080048609.01.T01:intron | 35.0% | |
| TGCTTTATAATAACCAACGG+TGG | - | contig374end:3892-3911 | MsG0080048609.01.T01:intron | 35.0% | |
| TTAACCTCAGATCCAAACAT+GGG | - | contig374end:3934-3953 | MsG0080048609.01.T01:intron | 35.0% | |
| TTTATGCTCTTCTTCTCAAG+AGG | - | contig374end:4422-4441 | MsG0080048609.01.T01:CDS | 35.0% | |
| TTTGTTCCTGTTTACTTCAC+GGG | + | contig374end:3100-3119 | None:intergenic | 35.0% | |
| ! | AAAGTCAATTTTACCCGGTA+AGG | + | contig374end:2534-2553 | None:intergenic | 35.0% |
| ! | AATGTTTTCAAAGCAGGTCA+GGG | + | contig374end:2799-2818 | None:intergenic | 35.0% |
| ! | AGGGTTGTTACTTCCAAATA+GGG | - | contig374end:3001-3020 | MsG0080048609.01.T01:intron | 35.0% |
| ! | ATTAAAAACATTTGGGGCTC+GGG | - | contig374end:3754-3773 | MsG0080048609.01.T01:CDS | 35.0% |
| ! | CATTAAAAACATTTGGGGCT+CGG | - | contig374end:3753-3772 | MsG0080048609.01.T01:CDS | 35.0% |
| ! | GACAGTACTGAAATGAATGT+CGG | + | contig374end:4200-4219 | None:intergenic | 35.0% |
| ! | TAATGTTTTCAAAGCAGGTC+AGG | + | contig374end:2800-2819 | None:intergenic | 35.0% |
| ! | TAGGGTTGTTACTTCCAAAT+AGG | - | contig374end:3000-3019 | MsG0080048609.01.T01:intron | 35.0% |
| ! | TGTTTGGATCTGAGGTTAAT+TGG | + | contig374end:3933-3952 | None:intergenic | 35.0% |
| ! | TTAGGATTGGTAAAAGGACA+TGG | - | contig374end:3433-3452 | MsG0080048609.01.T01:intron | 35.0% |
| !! | AGCACTGACATTTCAATTGA+AGG | + | contig374end:3403-3422 | None:intergenic | 35.0% |
| !! | CAAGTCACATGTTTTGAATG+TGG | - | contig374end:4246-4265 | MsG0080048609.01.T01:CDS | 35.0% |
| !! | TGACCTGCTTTGAAAACATT+AGG | - | contig374end:2799-2818 | MsG0080048609.01.T01:intron | 35.0% |
| !! | TTTATGTTTGTTCGGTGTGA+TGG | - | contig374end:2669-2688 | MsG0080048609.01.T01:intron | 35.0% |
| !!! | GTTTTTGTTGGTGATTCGAT+TGG | - | contig374end:2312-2331 | MsG0080048609.01.T01:CDS | 35.0% |
| AAACAAGAGCTCTGTCTATG+AGG | - | contig374end:2383-2402 | MsG0080048609.01.T01:CDS | 40.0% | |
| AAATCTAAGTACGCAGTGCT+TGG | - | contig374end:3787-3806 | MsG0080048609.01.T01:intron | 40.0% | |
| AACCCAATTACAAAGCACAC+AGG | - | contig374end:2414-2433 | MsG0080048609.01.T01:CDS | 40.0% | |
| AAGCCTGTGTGCTTTGTAAT+TGG | + | contig374end:2420-2439 | None:intergenic | 40.0% | |
| ACACATACGTGTCTGCTAAA+AGG | + | contig374end:3623-3642 | None:intergenic | 40.0% | |
| ACAGATAATAGGTCAGGCTA+AGG | + | contig374end:2825-2844 | None:intergenic | 40.0% | |
| ACTGCACTGTTGAATACTAC+AGG | - | contig374end:2466-2485 | MsG0080048609.01.T01:CDS | 40.0% | |
| AGAATATCGTTCCACGAATC+GGG | + | contig374end:4403-4422 | None:intergenic | 40.0% | |
| AGCCTGTGTGCTTTGTAATT+GGG | + | contig374end:2419-2438 | None:intergenic | 40.0% | |
| AGCTCTGTCTATGAGGTTAA+TGG | - | contig374end:2390-2409 | MsG0080048609.01.T01:CDS | 40.0% | |
| AGGTTAATTGGCAGAATCAC+GGG | + | contig374end:3921-3940 | None:intergenic | 40.0% | |
| AGTATTACCAAGCCCATGTT+TGG | + | contig374end:3949-3968 | None:intergenic | 40.0% | |
| ATGTAGAGAATCTGGAGGTT+TGG | - | contig374end:3710-3729 | MsG0080048609.01.T01:CDS | 40.0% | |
| ATTCAGTCCATTGGATGCTA+GGG | - | contig374end:3987-4006 | MsG0080048609.01.T01:intron | 40.0% | |
| ATTCGATTGGAAGGAACCAA+TGG | - | contig374end:2325-2344 | MsG0080048609.01.T01:CDS | 40.0% | |
| CAAAGTAACTTATACGCCCA+AGG | + | contig374end:2878-2897 | None:intergenic | 40.0% | |
| CACAGAACTTTCCACTTCTT+AGG | - | contig374end:3592-3611 | MsG0080048609.01.T01:intron | 40.0% | |
| CAGTTGAGACAGTAGTTGAT+TGG | - | contig374end:3070-3089 | MsG0080048609.01.T01:intron | 40.0% | |
| CGTCCTTGCACTACTAAAAA+CGG | + | contig374end:2495-2514 | None:intergenic | 40.0% | |
| GAGAAGACCGTCAAAATGTA+AGG | - | contig374end:2639-2658 | MsG0080048609.01.T01:intron | 40.0% | |
| GAGGTTAATTGGCAGAATCA+CGG | + | contig374end:3922-3941 | None:intergenic | 40.0% | |
| GCTCTGTCTATGAGGTTAAT+GGG | - | contig374end:2391-2410 | MsG0080048609.01.T01:CDS | 40.0% | |
| GGATATCAGATTCAGTCCAT+TGG | - | contig374end:3978-3997 | MsG0080048609.01.T01:intron | 40.0% | |
| GTAATCACACATGTTGGTGT+CGG | - | contig374end:3348-3367 | MsG0080048609.01.T01:intron | 40.0% | |
| TACAGAGAAGTGATTCCCAT+TGG | + | contig374end:2344-2363 | None:intergenic | 40.0% | |
| TAGACAAACCTGAAATGGAC+AGG | + | contig374end:3150-3169 | None:intergenic | 40.0% | |
| TCGGAAACACTACCTGATTT+AGG | - | contig374end:4157-4176 | MsG0080048609.01.T01:CDS | 40.0% | |
| TTCGATTGGAAGGAACCAAT+GGG | - | contig374end:2326-2345 | MsG0080048609.01.T01:CDS | 40.0% | |
| ! | AATGGACAGGAGCATAAGTT+CGG | + | contig374end:3137-3156 | None:intergenic | 40.0% |
| ! | ACCGGGTAAAATTGACTTTG+AGG | - | contig374end:2535-2554 | MsG0080048609.01.T01:CDS | 40.0% |
| ! | AGGCCTAATGTTTTCAAAGC+AGG | + | contig374end:2805-2824 | None:intergenic | 40.0% |
| ! | CCCTCAAAGTCAATTTTACC+CGG | + | contig374end:2539-2558 | None:intergenic | 40.0% |
| ! | CCGGGTAAAATTGACTTTGA+GGG | - | contig374end:2536-2555 | MsG0080048609.01.T01:CDS | 40.0% |
| ! | GACTTTGAGGGTTGATCATA+TGG | - | contig374end:2548-2567 | MsG0080048609.01.T01:CDS | 40.0% |
| ! | GGGTTGTTACTTCCAAATAG+GGG | - | contig374end:3002-3021 | MsG0080048609.01.T01:intron | 40.0% |
| ! | TAGTTTTCCCTAGCATCCAA+TGG | + | contig374end:3997-4016 | None:intergenic | 40.0% |
| ! | TCTCAAGAGGAAGGCTTTTT+CGG | - | contig374end:4435-4454 | MsG0080048609.01.T01:CDS | 40.0% |
| ! | TGGGCGTATAAGTTACTTTG+TGG | - | contig374end:2878-2897 | MsG0080048609.01.T01:intron | 40.0% |
| ! | TTGTTACTTCCAAATAGGGG+AGG | - | contig374end:3005-3024 | MsG0080048609.01.T01:intron | 40.0% |
| ! | TTTCCTTTCACTGCAGCTTT+TGG | - | contig374end:3504-3523 | MsG0080048609.01.T01:intron | 40.0% |
| !! | ATATGGACTGGACTTCTCAT+AGG | - | contig374end:2565-2584 | MsG0080048609.01.T01:CDS | 40.0% |
| !! | ATGTGTTGGTTCTCAATGCT+GGG | - | contig374end:2601-2620 | MsG0080048609.01.T01:CDS | 40.0% |
| !! | TTGTTGGTGATTCGATTGGA+AGG | - | contig374end:2316-2335 | MsG0080048609.01.T01:CDS | 40.0% |
| !!! | CGTTTTTAGTAGTGCAAGGA+CGG | - | contig374end:2493-2512 | MsG0080048609.01.T01:CDS | 40.0% |
| !!! | TCTCCGTTTTTAGTAGTGCA+AGG | - | contig374end:2489-2508 | MsG0080048609.01.T01:CDS | 40.0% |
| AAGTACGCAGTGCTTGGAAT+CGG | - | contig374end:3793-3812 | MsG0080048609.01.T01:intron | 45.0% | |
| ATGGGCCTACGACAGATAAT+AGG | + | contig374end:2836-2855 | None:intergenic | 45.0% | |
| CAGTGTCGTATATTCGTGTC+CGG | + | contig374end:3296-3315 | None:intergenic | 45.0% | |
| CATCGACACAAACATGACAC+CGG | - | contig374end:3274-3293 | MsG0080048609.01.T01:intron | 45.0% | |
| CATGTGATTAGGGTGGGAAT+AGG | - | contig374end:2748-2767 | MsG0080048609.01.T01:intron | 45.0% | |
| CCTACGACAGATAATAGGTC+AGG | + | contig374end:2831-2850 | None:intergenic | 45.0% | |
| CCTGACCTATTATCTGTCGT+AGG | - | contig374end:2828-2847 | MsG0080048609.01.T01:intron | 45.0% | |
| CTTATGCTCCTGTCCATTTC+AGG | - | contig374end:3139-3158 | MsG0080048609.01.T01:intron | 45.0% | |
| GATTCAGTCCATTGGATGCT+AGG | - | contig374end:3986-4005 | MsG0080048609.01.T01:intron | 45.0% | |
| GGTTAATTGGCAGAATCACG+GGG | + | contig374end:3920-3939 | None:intergenic | 45.0% | |
| TACAAAGCACACAGGCTTCT+TGG | - | contig374end:2422-2441 | MsG0080048609.01.T01:CDS | 45.0% | |
| TACTATATCGGGCCAGACAA+GGG | - | contig374end:4325-4344 | MsG0080048609.01.T01:CDS | 45.0% | |
| TAGCCAAAAGCTGCAGTGAA+AGG | + | contig374end:3510-3529 | None:intergenic | 45.0% | |
| TCTTCACTTCCTCCCCTATT+TGG | + | contig374end:3017-3036 | None:intergenic | 45.0% | |
| TGCTCTTCTTCTCAAGAGGA+AGG | - | contig374end:4426-4445 | MsG0080048609.01.T01:CDS | 45.0% | |
| TTACTATATCGGGCCAGACA+AGG | - | contig374end:4324-4343 | MsG0080048609.01.T01:CDS | 45.0% | |
| ! | AAATGAATGTCGGAGAGTGC+AGG | + | contig374end:4190-4209 | None:intergenic | 45.0% |
| ! | CAGGAGCATAAGTTCGGAAA+AGG | + | contig374end:3131-3150 | None:intergenic | 45.0% |
| ! | TGAGGGTTGATCATATGGAC+TGG | - | contig374end:2553-2572 | MsG0080048609.01.T01:CDS | 45.0% |
| !! | GATGTGTTGGTTCTCAATGC+TGG | - | contig374end:2600-2619 | MsG0080048609.01.T01:CDS | 45.0% |
| !! | TACTGGTGGTGGTTGTCATT+CGG | - | contig374end:4138-4157 | MsG0080048609.01.T01:CDS | 45.0% |
| AGCGACAAGACTGTAGCCAT+TGG | - | contig374end:4362-4381 | MsG0080048609.01.T01:CDS | 50.0% | |
| CAAGCCCATGTTTGGATCTG+AGG | + | contig374end:3941-3960 | None:intergenic | 50.0% | |
| CTCAGATCCAAACATGGGCT+TGG | - | contig374end:3939-3958 | MsG0080048609.01.T01:intron | 50.0% | |
| GGATTGCCCGTGAAGTAAAC+AGG | - | contig374end:3091-3110 | MsG0080048609.01.T01:intron | 50.0% | |
| GTGGAGAGATGCAGATGTGT+TGG | - | contig374end:2587-2606 | MsG0080048609.01.T01:CDS | 50.0% | |
| TGGTTCTCAATGCTGGGCAT+TGG | - | contig374end:2607-2626 | MsG0080048609.01.T01:CDS | 50.0% | |
| TGTCGTTGATGTATCAGGGG+TGG | - | contig374end:4106-4125 | MsG0080048609.01.T01:intron | 50.0% | |
| TTTCAAAGCAGGTCAGGGTC+AGG | + | contig374end:2794-2813 | None:intergenic | 50.0% | |
| ! | ACAGTCTTGTCGCTGCATAG+AGG | + | contig374end:4356-4375 | None:intergenic | 50.0% |
| ! | TGGACTGGACTTCTCATAGG+TGG | - | contig374end:2568-2587 | MsG0080048609.01.T01:CDS | 50.0% |
| !! | TTCTCAATGCTGGGCATTGG+TGG | - | contig374end:2610-2629 | MsG0080048609.01.T01:CDS | 50.0% |
| ACGCAGTGCTTGGAATCGGA+AGG | - | contig374end:3797-3816 | MsG0080048609.01.T01:intron | 55.0% | |
| AGGGGTGGTGACTGGAATAC+TGG | - | contig374end:4121-4140 | MsG0080048609.01.T01:intron | 55.0% | |
| ATGTCGGCACGCAGGAAAGA+CGG | - | contig374end:4289-4308 | MsG0080048609.01.T01:CDS | 55.0% | |
| CGCGCGTTGTGACAAGACAT+TGG | + | contig374end:4224-4243 | None:intergenic | 55.0% | |
| CTTGTCGCTGCATAGAGGCT+GGG | + | contig374end:4351-4370 | None:intergenic | 55.0% | |
| GAACACCAGGGAGACACCAA+TGG | + | contig374end:4381-4400 | None:intergenic | 55.0% | |
| GATGTATCAGGGGTGGTGAC+TGG | - | contig374end:4113-4132 | MsG0080048609.01.T01:intron | 55.0% | |
| GCAGGCACAGAGCCTAAATC+AGG | + | contig374end:4172-4191 | None:intergenic | 55.0% | |
| GGTGACTGGAATACTGGTGG+TGG | - | contig374end:4127-4146 | MsG0080048609.01.T01:intron | 55.0% | |
| GGTGGTGACTGGAATACTGG+TGG | - | contig374end:4124-4143 | MsG0080048609.01.T01:intron | 55.0% | |
| TCACACAAATGTCGGCACGC+AGG | - | contig374end:4281-4300 | MsG0080048609.01.T01:CDS | 55.0% | |
| TCCACGAATCGGGAACACCA+GGG | + | contig374end:4393-4412 | None:intergenic | 55.0% | |
| TCTTGTCGCTGCATAGAGGC+TGG | + | contig374end:4352-4371 | None:intergenic | 55.0% | |
| TTCCACGAATCGGGAACACC+AGG | + | contig374end:4394-4413 | None:intergenic | 55.0% | |
| ! | TGTAGCCATTGGTGTCTCCC+TGG | - | contig374end:4373-4392 | MsG0080048609.01.T01:CDS | 55.0% |
| ATAGAGGCTGGGCCCTTGTC+TGG | + | contig374end:4340-4359 | None:intergenic | 60.0% | |
| GAATCACGGGGTTCCACCGT+TGG | + | contig374end:3908-3927 | None:intergenic | 60.0% | |
| TGCAAGGACGGCCTCCTCAT+GGG | - | contig374end:2505-2524 | MsG0080048609.01.T01:CDS | 60.0% | |
| ! | CTCCTCATGGGGCACCTTAC+CGG | - | contig374end:2517-2536 | MsG0080048609.01.T01:CDS | 60.0% |
| ! | TCCCTGGTGTTCCCGATTCG+TGG | - | contig374end:4389-4408 | MsG0080048609.01.T01:CDS | 60.0% |
| ! | TCCTCATGGGGCACCTTACC+GGG | - | contig374end:2518-2537 | MsG0080048609.01.T01:CDS | 60.0% |
| GCAAGGACGGCCTCCTCATG+GGG | - | contig374end:2506-2525 | MsG0080048609.01.T01:CDS | 65.0% | |
| GTGCAAGGACGGCCTCCTCA+TGG | - | contig374end:2504-2523 | MsG0080048609.01.T01:CDS | 65.0% | |
| ! | ACCCGGTAAGGTGCCCCATG+AGG | + | contig374end:2522-2541 | None:intergenic | 65.0% |
| ! | CGGTAAGGTGCCCCATGAGG+AGG | + | contig374end:2519-2538 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig374end | gene | 2282 | 4495 | 2282 | ID=MsG0080048609.01;Name=MsG0080048609.01 |
| contig374end | mRNA | 2282 | 4495 | 2282 | ID=MsG0080048609.01.T01;Parent=MsG0080048609.01;Name=MsG0080048609.01.T01;_AED=0.48;_eAED=0.63;_QI=0|0|0|1|0.75|0.8|5|0|298 |
| contig374end | exon | 4130 | 4495 | 4130 | ID=MsG0080048609.01.T01:exon:37847;Parent=MsG0080048609.01.T01 |
| contig374end | exon | 3617 | 3774 | 3617 | ID=MsG0080048609.01.T01:exon:37848;Parent=MsG0080048609.01.T01 |
| contig374end | exon | 2282 | 2654 | 2282 | ID=MsG0080048609.01.T01:exon:37849;Parent=MsG0080048609.01.T01 |
| contig374end | CDS | 4130 | 4495 | 4130 | ID=MsG0080048609.01.T01:cds;Parent=MsG0080048609.01.T01 |
| contig374end | CDS | 3617 | 3774 | 3617 | ID=MsG0080048609.01.T01:cds;Parent=MsG0080048609.01.T01 |
| contig374end | CDS | 2282 | 2654 | 2282 | ID=MsG0080048609.01.T01:cds;Parent=MsG0080048609.01.T01 |
| Gene Sequence |
| Protein sequence |
