AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047111.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047111.01.T01 MTR_7g079440 71.161 534 37 5 3 470 58 540 0.0 705
MsG0880047111.01.T01 MTR_7g079440 71.161 534 37 5 3 470 58 540 0.0 702
MsG0880047111.01.T01 MTR_7g079440 73.804 439 27 4 3 375 58 474 0.0 609
MsG0880047111.01.T01 MTR_1g062190 43.407 364 151 6 108 468 119 430 8.11e-89 281
MsG0880047111.01.T01 MTR_5g009110 42.120 368 148 7 108 463 114 428 7.14e-84 266
MsG0880047111.01.T01 MTR_5g009110 42.120 368 148 7 108 463 114 428 2.97e-82 265
MsG0880047111.01.T01 MTR_5g009110 41.141 333 131 7 143 463 1 280 2.47e-69 224
MsG0880047111.01.T01 MTR_5g009110 41.141 333 131 7 143 463 1 280 1.40e-67 223
MsG0880047111.01.T01 MTR_7g033570 24.372 398 213 15 83 463 53 379 1.67e-16 82.4
MsG0880047111.01.T01 MTR_1g037550 24.586 362 223 15 111 463 112 432 4.10e-16 81.3
MsG0880047111.01.T01 MTR_2g072270 22.316 354 214 10 111 462 114 408 1.43e-15 79.3
MsG0880047111.01.T01 MTR_1g035670 24.267 375 201 12 109 463 76 387 2.43e-15 78.6
MsG0880047111.01.T01 MTR_1g069715 23.269 361 204 13 121 463 5 310 3.58e-15 78.6
MsG0880047111.01.T01 MTR_1g037560 23.014 365 225 13 109 463 110 428 3.72e-15 78.2
MsG0880047111.01.T01 MTR_8g030590 24.377 361 215 12 112 463 83 394 1.91e-14 75.9
MsG0880047111.01.T01 MTR_3g080580 24.737 380 208 14 100 463 76 393 2.89e-14 75.5
MsG0880047111.01.T01 MTR_1g035750 25.341 367 207 12 111 463 77 390 4.86e-14 74.7
MsG0880047111.01.T01 MTR_4g075110 24.384 365 216 13 111 463 119 435 1.08e-13 73.6
MsG0880047111.01.T01 MTR_8g088470 24.679 389 206 14 89 463 61 376 1.37e-13 73.2
MsG0880047111.01.T01 MTR_1g036130 23.243 370 215 13 109 463 76 391 3.49e-13 72.0
MsG0880047111.01.T01 MTR_7g033580 23.370 368 206 12 109 463 75 379 4.55e-13 71.6
MsG0880047111.01.T01 MTR_7g406990 21.591 352 214 10 112 452 95 395 5.13e-13 71.2
MsG0880047111.01.T01 MTR_4g054920 25.405 370 198 16 112 463 92 401 6.09e-13 71.2
MsG0880047111.01.T01 MTR_8g098435 23.691 363 212 11 112 463 83 391 4.49e-12 68.6
MsG0880047111.01.T01 MTR_1g070345 24.100 361 203 13 111 463 86 383 1.85e-11 66.6
MsG0880047111.01.T01 MTR_1g050362 23.913 368 222 13 107 463 72 392 1.86e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047111.01.T01 AT1G31800 73.003 363 47 2 108 470 150 461 9.16e-178 511
MsG0880047111.01.T01 AT3G53130 43.956 364 149 7 108 468 119 430 3.37e-92 290
MsG0880047111.01.T01 AT4G15110 40.217 368 156 8 108 463 121 436 2.24e-80 260
MsG0880047111.01.T01 AT3G56630 23.978 367 214 12 105 463 72 381 3.26e-19 90.5
MsG0880047111.01.T01 AT5G23190 25.205 365 211 11 112 463 111 426 1.22e-18 89.0
MsG0880047111.01.T01 AT1G69500 23.515 404 229 12 93 463 53 409 6.47e-18 86.7
MsG0880047111.01.T01 AT1G34540 23.077 364 216 12 108 463 74 381 2.80e-17 84.7
MsG0880047111.01.T01 AT1G24540 24.384 365 216 12 111 463 90 406 4.79e-17 84.0
MsG0880047111.01.T01 AT1G57750 25.967 362 199 12 111 463 80 381 1.64e-16 82.0
MsG0880047111.01.T01 AT1G57750 25.967 362 199 12 111 463 80 381 2.40e-16 81.6
MsG0880047111.01.T01 AT1G13140 23.181 371 204 15 116 463 98 410 1.32e-15 79.7
MsG0880047111.01.T01 AT1G13140 23.380 355 197 13 116 463 98 384 1.53e-15 79.3
MsG0880047111.01.T01 AT2G27690 24.044 366 204 16 111 465 76 378 1.77e-15 79.0
MsG0880047111.01.T01 AT4G39500 24.462 372 202 14 111 463 40 351 1.43e-14 76.3
MsG0880047111.01.T01 AT4G39500 24.462 372 202 14 111 463 90 401 2.04e-14 75.9
MsG0880047111.01.T01 AT4G39490 24.932 365 219 10 111 463 80 401 3.83e-14 75.1
MsG0880047111.01.T01 AT4G32170 25.203 369 201 16 111 463 79 388 1.37e-13 73.2
MsG0880047111.01.T01 AT5G63450 22.466 365 219 13 111 470 142 447 8.11e-13 70.9
MsG0880047111.01.T01 AT5G63450 22.466 365 219 13 111 470 84 389 1.08e-12 70.5
MsG0880047111.01.T01 AT3G26125 22.039 363 234 11 112 463 94 418 1.09e-12 70.5
MsG0880047111.01.T01 AT2G23180 25.668 374 200 14 111 463 81 397 1.32e-12 70.1
MsG0880047111.01.T01 AT4G39480 24.317 366 217 11 111 463 80 398 6.31e-11 65.1
MsG0880047111.01.T01 AT3G48520 23.784 370 214 13 100 463 72 379 7.27e-11 64.7

Find 86 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCTTTGAAAGAAGATAAA+AGG 0.261490 8:-82088728 None:intergenic
GGATAACTGAGTTTCCTTAT+TGG 0.275337 8:+82086195 MsG0880047111.01.T01:intron
GATAACTGAGTTTCCTTATT+GGG 0.298652 8:+82086196 MsG0880047111.01.T01:intron
TATAAACAGCCTGACTAATT+AGG 0.302070 8:-82087517 None:intergenic
CGGTTGACGTTGGACGTCAT+TGG 0.314089 8:+82087012 MsG0880047111.01.T01:CDS
TGTGTGTTATCTAACTTCTA+TGG 0.328562 8:+82084749 MsG0880047111.01.T01:five_prime_UTR
CAGTCTGGGATCTCCCAATA+TGG 0.330496 8:+82087582 MsG0880047111.01.T01:CDS
GGGGATATGTCTTTCCATAT+TGG 0.334123 8:-82087596 None:intergenic
CAATTCAAAGGCTTATTCTA+AGG 0.335921 8:+82086279 MsG0880047111.01.T01:CDS
TTGGAGAGTATCCTATAAAA+AGG 0.345192 8:+82089361 MsG0880047111.01.T01:CDS
ATTCACTGTCAACAAGAATC+TGG 0.355146 8:+82085071 MsG0880047111.01.T01:CDS
GGGATATGTCTTTCCATATT+GGG 0.360255 8:-82087595 None:intergenic
GGGTATCTTGGCTGAGATCC+TGG 0.361606 8:+82086397 MsG0880047111.01.T01:intron
AAACTTATCTCTTCCTCAAT+TGG 0.362202 8:+82084702 MsG0880047111.01.T01:five_prime_UTR
AGTTAGATAACACACAAAAT+TGG 0.369109 8:-82084742 None:intergenic
TTCTTCATGTCTTCAATAGT+TGG 0.373705 8:-82089157 None:intergenic
GGTTGACGTTGGACGTCATT+GGG 0.374576 8:+82087013 MsG0880047111.01.T01:CDS
CTTCATTTCTTGTTGGCGTC+AGG 0.379762 8:+82088533 MsG0880047111.01.T01:CDS
TCTCCATGTGCAGGGTATCT+TGG 0.381851 8:+82086385 MsG0880047111.01.T01:intron
GGGAGATCCCAGACTGGAAT+TGG 0.382730 8:-82087575 None:intergenic
TGTCTGTAGCTTGTCCAAAA+AGG 0.392789 8:-82086921 None:intergenic
TCTATTGAGGATGATGTTCT+TGG 0.394782 8:+82089342 MsG0880047111.01.T01:CDS
TCCCAGCTGATGGAGAAATA+TGG 0.395866 8:+82086444 MsG0880047111.01.T01:CDS
CGCCATATTTCTCCATCAGC+TGG 0.398955 8:-82086446 None:intergenic
CCATCATCCACTGAATCATT+TGG 0.405046 8:-82084973 None:intergenic
GTTTGAGGTGAAAGAGGAGG+AGG 0.412095 8:-82084798 None:intergenic
TCACAGGTTGACTCTGTCCT+TGG 0.413872 8:+82089124 MsG0880047111.01.T01:CDS
GTGTTTCTCCAATTCCAGTC+TGG 0.421398 8:+82087567 MsG0880047111.01.T01:CDS
AAGTATTCTTCATTTCTTGT+TGG 0.422407 8:+82088526 MsG0880047111.01.T01:CDS
TGCACTTTACCTAATTAGTC+AGG 0.431026 8:+82087508 MsG0880047111.01.T01:CDS
AAAACCTTCAGATGCAATGC+TGG 0.432133 8:-82086491 None:intergenic
GGACTGCAAGATACCCAATA+AGG 0.433303 8:-82086209 None:intergenic
TGTCTTCAATAGTTGGAAAT+CGG 0.434207 8:-82089150 None:intergenic
TTAATGACAATGCTCATTGC+TGG 0.436868 8:+82088673 MsG0880047111.01.T01:CDS
ATGCAGCAGTATCTAGCTTC+TGG 0.440083 8:-82086951 None:intergenic
ATTGCATGTTCTTCTTCAAA+TGG 0.451850 8:+82084943 MsG0880047111.01.T01:CDS
TGAAATATATTTGGAATGAA+AGG 0.453386 8:-82084825 None:intergenic
TGACGGAGAAGATGTTGAAA+TGG 0.454312 8:+82086975 MsG0880047111.01.T01:CDS
CGAATCAACACAGGCGGTTG+TGG 0.455123 8:-82089315 None:intergenic
CAGTAACCTTCCTTTGACGC+GGG 0.474103 8:-82087616 None:intergenic
AACAAGAAATGAAGAATACT+TGG 0.476283 8:-82088524 None:intergenic
TGAAACCTCTGCTTGGAGCT+TGG 0.477161 8:-82089021 None:intergenic
GAGAAATATGGCGAGTTAGA+CGG 0.478823 8:+82086456 MsG0880047111.01.T01:CDS
ACAAGCACACACACATGTAT+AGG 0.483724 8:-82088804 None:intergenic
TGTTTCTCCAATTCCAGTCT+GGG 0.500723 8:+82087568 MsG0880047111.01.T01:CDS
GTTGATTCGTCGCTCTATTG+AGG 0.504964 8:+82089329 MsG0880047111.01.T01:CDS
TTTGGAATATTCCTTTACTC+AGG 0.508220 8:+82087100 MsG0880047111.01.T01:CDS
CTTTCCCCATTACAAAATCC+AGG 0.508588 8:-82086415 None:intergenic
GCAGTCCTTTCTGATAGTAT+CGG 0.516721 8:+82086225 MsG0880047111.01.T01:CDS
ATCTTCTGCTTCTCTCAGTA+CGG 0.517609 8:-82087540 None:intergenic
ACCTACATACGCCTGAGTAA+AGG 0.527449 8:-82087111 None:intergenic
TTCACTGTCAACAAGAATCT+GGG 0.536268 8:+82085072 MsG0880047111.01.T01:CDS
CTTTCTGATAGTATCGGATC+CGG 0.537349 8:+82086231 MsG0880047111.01.T01:CDS
AAATGACACTGGTATAATTG+AGG 0.541790 8:+82087071 MsG0880047111.01.T01:CDS
TAAACAGAGAATGGTGGATG+AGG 0.543556 8:+82088460 MsG0880047111.01.T01:intron
AAAGTGGTGGTTGGTTTGAG+TGG 0.545307 8:-82084853 None:intergenic
TGTCCCAGCATTGCATCTGA+AGG 0.546216 8:+82086487 MsG0880047111.01.T01:CDS
AAAGGGCTTATCCCAGCTGA+TGG 0.551393 8:+82086434 MsG0880047111.01.T01:CDS
TTTGTTTGAGGTGAAAGAGG+AGG 0.552654 8:-82084801 None:intergenic
CATATCCCCGCGTCAAAGGA+AGG 0.563947 8:+82087610 MsG0880047111.01.T01:CDS
CGGATCCGATACTATCAGAA+AGG 0.565357 8:-82086230 None:intergenic
GATCTCATGAAACCTCTGCT+TGG 0.570039 8:-82089028 None:intergenic
TTGTCTGCTAAAATTGCCTC+AGG 0.575153 8:+82085045 MsG0880047111.01.T01:CDS
GATAGTTTATCAAATGACAC+TGG 0.581456 8:+82087060 MsG0880047111.01.T01:CDS
AAGACATATCCCCGCGTCAA+AGG 0.582858 8:+82087606 MsG0880047111.01.T01:CDS
CATATTGGGAGATCCCAGAC+TGG 0.583871 8:-82087581 None:intergenic
ACAAAAGTAACATCCAATTG+AGG 0.584369 8:-82084715 None:intergenic
CCAAATGATTCAGTGGATGA+TGG 0.584386 8:+82084973 MsG0880047111.01.T01:CDS
CATATTGAAAGACAATTCAA+AGG 0.586904 8:+82086267 MsG0880047111.01.T01:CDS
CTAGATACTGCTGCATCTGA+CGG 0.591558 8:+82086958 MsG0880047111.01.T01:CDS
GCCATATTTCTCCATCAGCT+GGG 0.592377 8:-82086445 None:intergenic
TGGAGCTTGGACATGACACT+AGG 0.597611 8:-82089008 None:intergenic
AAACCTTCAGATGCAATGCT+GGG 0.600770 8:-82086490 None:intergenic
TAGTTTGTAGCAGCTATGAT+CGG 0.608665 8:+82086898 MsG0880047111.01.T01:intron
TATCATTAAACAGAGAATGG+TGG 0.623094 8:+82088454 MsG0880047111.01.T01:intron
GCAGTAACCTTCCTTTGACG+CGG 0.635717 8:-82087617 None:intergenic
CAATCTCATAGCAATATGCA+AGG 0.636752 8:+82087670 MsG0880047111.01.T01:CDS
TAGAAGTCCAAATGATTCAG+TGG 0.636875 8:+82084966 MsG0880047111.01.T01:CDS
CATGTCCAAGCTCCAAGCAG+AGG 0.646786 8:+82089016 MsG0880047111.01.T01:CDS
AGTAACCTTCCTTTGACGCG+GGG 0.661105 8:-82087615 None:intergenic
TAGTTGGAAATCGGTCACCA+AGG 0.670763 8:-82089141 None:intergenic
GTTGACAGTGAATTCACCTG+AGG 0.673372 8:-82085061 None:intergenic
ATAGAGCGACGAATCAACAC+AGG 0.705584 8:-82089324 None:intergenic
GAGCGACGAATCAACACAGG+CGG 0.723596 8:-82089321 None:intergenic
AAAGGTCCAAGTTAAAACAG+CGG 0.725324 8:-82088710 None:intergenic
TACAACTCGAGTGATCAATG+AGG 0.753700 8:+82089189 MsG0880047111.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAATATTATTGTATT+AGG - Chr8:82088967-82088986 None:intergenic 10.0%
!!! AATAGTCTATAATATTTTTA+CGG - Chr8:82087378-82087397 None:intergenic 10.0%
!!! TTTTTTGATTTTTTTTTTGT+GGG + Chr8:82085231-82085250 MsG0880047111.01.T01:intron 10.0%
!!! TTTTTTTGATTTTTTTTTTG+TGG + Chr8:82085230-82085249 MsG0880047111.01.T01:intron 10.0%
!! AAAAAAACGGAAAAATATAT+TGG - Chr8:82087309-82087328 None:intergenic 15.0%
!! AAAAAACGGAAAAATATATT+GGG - Chr8:82087308-82087327 None:intergenic 15.0%
!! AAATAATCAATTTAAACATG+CGG - Chr8:82089234-82089253 None:intergenic 15.0%
!! AATTTCATGAAGAAAAAAAA+CGG - Chr8:82087322-82087341 None:intergenic 15.0%
!! ATTCTTCTTATATAATATCT+TGG + Chr8:82088180-82088199 MsG0880047111.01.T01:intron 15.0%
!! TAAAAAATCAATTATCTTGT+GGG - Chr8:82087160-82087179 None:intergenic 15.0%
!! TTTACTATGTCAATAATAAA+AGG + Chr8:82086161-82086180 MsG0880047111.01.T01:intron 15.0%
!!! TATAGTGTATAATTTGATTT+GGG + Chr8:82085195-82085214 MsG0880047111.01.T01:intron 15.0%
!! AAAAAATCAATTATCTTGTG+GGG - Chr8:82087159-82087178 None:intergenic 20.0%
!! AAGTTACTGAATTAAAGTTT+AGG - Chr8:82087898-82087917 None:intergenic 20.0%
!! AATAATCAATTTAAACATGC+GGG - Chr8:82089233-82089252 None:intergenic 20.0%
!! AATTATCATTAAACAGAGAA+TGG + Chr8:82088451-82088470 MsG0880047111.01.T01:intron 20.0%
!! ATGAAAATTTGGAAACTTTA+AGG - Chr8:82085111-82085130 None:intergenic 20.0%
!! ATTATACACTATAGATAATG+AGG - Chr8:82085188-82085207 None:intergenic 20.0%
!! CTATAGTGTATAATTTGATT+TGG + Chr8:82085194-82085213 MsG0880047111.01.T01:intron 20.0%
!! GTAAAAAATCAATTATCTTG+TGG - Chr8:82087161-82087180 None:intergenic 20.0%
!! TAAATATTCCAGATATATTG+TGG + Chr8:82087943-82087962 MsG0880047111.01.T01:intron 20.0%
!! TAACATAAAAAATGACAGAA+GGG - Chr8:82087445-82087464 None:intergenic 20.0%
!! TACAAACAAATAATTGTAAC+AGG - Chr8:82087828-82087847 None:intergenic 20.0%
!! TCAAGAAAAGAATGAAAATT+TGG - Chr8:82085122-82085141 None:intergenic 20.0%
!! TTTGTTTGTATTCATAATCA+TGG + Chr8:82087838-82087857 MsG0880047111.01.T01:intron 20.0%
!!! AAAGTATCATATTAGATTTC+CGG + Chr8:82089072-82089091 MsG0880047111.01.T01:intron 20.0%
!!! GATAATATATACATTTTCAC+AGG + Chr8:82089108-82089127 MsG0880047111.01.T01:CDS 20.0%
!!! GTGGTTTTATGAAATATATT+TGG - Chr8:82084837-82084856 None:intergenic 20.0%
!!! TGAAATATATTTGGAATGAA+AGG - Chr8:82084828-82084847 None:intergenic 20.0%
! AAAAAGACTTAACTAACCTT+TGG - Chr8:82085458-82085477 None:intergenic 25.0%
! AAAAATCAATTATCTTGTGG+GGG - Chr8:82087158-82087177 None:intergenic 25.0%
! AACAAGAAATGAAGAATACT+TGG - Chr8:82088527-82088546 None:intergenic 25.0%
! AACAATGTCTCATAACTATA+TGG + Chr8:82085510-82085529 MsG0880047111.01.T01:intron 25.0%
! AAGTATTCTTCATTTCTTGT+TGG + Chr8:82088526-82088545 MsG0880047111.01.T01:CDS 25.0%
! AATCAATAGTCAACAATGAT+TGG + Chr8:82086308-82086327 MsG0880047111.01.T01:intron 25.0%
! ACAATGTCTCATAACTATAT+GGG + Chr8:82085511-82085530 MsG0880047111.01.T01:intron 25.0%
! ACTAAGATATGTAGTTAGAA+TGG + Chr8:82086631-82086650 MsG0880047111.01.T01:intron 25.0%
! ACTAATTTCAGTTTATCTGT+TGG - Chr8:82085978-82085997 None:intergenic 25.0%
! AGTTAGATAACACACAAAAT+TGG - Chr8:82084745-82084764 None:intergenic 25.0%
! ATTATCCTATTCTTATGAAC+CGG - Chr8:82089094-82089113 None:intergenic 25.0%
! CAAACTTATGTTCTCAAAAT+AGG + Chr8:82087722-82087741 MsG0880047111.01.T01:intron 25.0%
! CATATTGAAAGACAATTCAA+AGG + Chr8:82086267-82086286 MsG0880047111.01.T01:CDS 25.0%
! GGTTATAATTGAGTTATTTG+AGG + Chr8:82086659-82086678 MsG0880047111.01.T01:intron 25.0%
! GTAACATAAAAAATGACAGA+AGG - Chr8:82087446-82087465 None:intergenic 25.0%
! GTTACTATAACAATCACTAA+TGG + Chr8:82085803-82085822 MsG0880047111.01.T01:intron 25.0%
! TAAAAATTCCAGAATCTCAT+TGG - Chr8:82085311-82085330 None:intergenic 25.0%
! TATGAACTTTACATCACATA+TGG + Chr8:82085407-82085426 MsG0880047111.01.T01:intron 25.0%
! TATGTAGTTAGAATGGTTAT+AGG + Chr8:82086638-82086657 MsG0880047111.01.T01:intron 25.0%
! TTCATACAATGGAATGAAAA+AGG - Chr8:82085393-82085412 None:intergenic 25.0%
!! AATCTTTGTTGTGTAAAACT+AGG - Chr8:82088218-82088237 None:intergenic 25.0%
!! ACTATTGATTAACTACATCT+AGG + Chr8:82088001-82088020 MsG0880047111.01.T01:intron 25.0%
!! ACTGTTTTCATAATCTATCA+CGG + Chr8:82085886-82085905 MsG0880047111.01.T01:intron 25.0%
!! GTATAATTGAGGTAACTTTT+TGG + Chr8:82087082-82087101 MsG0880047111.01.T01:CDS 25.0%
!! TACCTTTGAAAGAAGATAAA+AGG - Chr8:82088731-82088750 None:intergenic 25.0%
!! TTTTGTCTTAATTCGATGAT+GGG + Chr8:82085145-82085164 MsG0880047111.01.T01:intron 25.0%
!! TTTTTGTCTTAATTCGATGA+TGG + Chr8:82085144-82085163 MsG0880047111.01.T01:intron 25.0%
!!! ACATATTTTGAATCTTTCGT+AGG + Chr8:82088141-82088160 MsG0880047111.01.T01:intron 25.0%
!!! GAGATTCTGGAATTTTTATT+TGG + Chr8:82085313-82085332 MsG0880047111.01.T01:intron 25.0%
!!! TTAGTTTTATAATGCAGTAG+TGG + Chr8:82088934-82088953 MsG0880047111.01.T01:intron 25.0%
AAACTTATCTCTTCCTCAAT+TGG + Chr8:82084702-82084721 MsG0880047111.01.T01:five_prime_UTR 30.0%
AAAGAAGAGCTTGTCAAATT+TGG + Chr8:82085279-82085298 MsG0880047111.01.T01:intron 30.0%
AAATGACACTGGTATAATTG+AGG + Chr8:82087071-82087090 MsG0880047111.01.T01:CDS 30.0%
AACAATCACTAATGGTCATT+TGG + Chr8:82085811-82085830 MsG0880047111.01.T01:intron 30.0%
AACTATCCCATATAAGACAT+TGG - Chr8:82086014-82086033 None:intergenic 30.0%
AACTTTACATCACATATGGT+GGG + Chr8:82085411-82085430 MsG0880047111.01.T01:intron 30.0%
AAGAAGAGCTTGTCAAATTT+GGG + Chr8:82085280-82085299 MsG0880047111.01.T01:intron 30.0%
AAGCTCTTCTTTAGTATAGA+AGG - Chr8:82085271-82085290 None:intergenic 30.0%
AATCAAAGGGTTTCTTTCTT+AGG + Chr8:82086595-82086614 MsG0880047111.01.T01:intron 30.0%
ACAAAAGTAACATCCAATTG+AGG - Chr8:82084718-82084737 None:intergenic 30.0%
ACATAGTAAAGTTCAAGATG+AGG - Chr8:82086151-82086170 None:intergenic 30.0%
ACGGAAAAATATATTGGGTT+TGG - Chr8:82087303-82087322 None:intergenic 30.0%
ACTATCCCATATAAGACATT+GGG - Chr8:82086013-82086032 None:intergenic 30.0%
AGAAGAAGATGAAGAAAAAG+TGG - Chr8:82084872-82084891 None:intergenic 30.0%
ATTGCATGTTCTTCTTCAAA+TGG + Chr8:82084943-82084962 MsG0880047111.01.T01:CDS 30.0%
ATTTCCATGAAAGTTGTAGA+TGG - Chr8:82088038-82088057 None:intergenic 30.0%
CAATTCAAAGGCTTATTCTA+AGG + Chr8:82086279-82086298 MsG0880047111.01.T01:CDS 30.0%
CATAACGTAGGTTTGATTAA+GGG + Chr8:82086054-82086073 MsG0880047111.01.T01:intron 30.0%
CCATTTATGAGTAAGATTAG+AGG + Chr8:82088092-82088111 MsG0880047111.01.T01:intron 30.0%
CCTCTAATCTTACTCATAAA+TGG - Chr8:82088095-82088114 None:intergenic 30.0%
CGTATGTAGGTATATAGATA+TGG + Chr8:82087123-82087142 MsG0880047111.01.T01:intron 30.0%
CTGAAATTAGTCAATCCAAA+AGG + Chr8:82085987-82086006 MsG0880047111.01.T01:intron 30.0%
GAATATTTAGCTAACGTTTC+AGG - Chr8:82087932-82087951 None:intergenic 30.0%
GATAACTGAGTTTCCTTATT+GGG + Chr8:82086196-82086215 MsG0880047111.01.T01:intron 30.0%
GATAGTTTATCAAATGACAC+TGG + Chr8:82087060-82087079 MsG0880047111.01.T01:CDS 30.0%
GTGATGTAAAGTTCATACAA+TGG - Chr8:82085404-82085423 None:intergenic 30.0%
TAAAATCACCTATCCAATGA+AGG - Chr8:82085618-82085637 None:intergenic 30.0%
TAACCAACACTTCAAATTGA+AGG - Chr8:82085758-82085777 None:intergenic 30.0%
TATAAACAGCCTGACTAATT+AGG - Chr8:82087520-82087539 None:intergenic 30.0%
TATCATTAAACAGAGAATGG+TGG + Chr8:82088454-82088473 MsG0880047111.01.T01:intron 30.0%
TCACTATTCCACAATATATC+TGG - Chr8:82087954-82087973 None:intergenic 30.0%
TCCTTAAAAACAACACATAG+AGG + Chr8:82084904-82084923 MsG0880047111.01.T01:CDS 30.0%
TGAATCTATGTACCTTCATT+AGG - Chr8:82086722-82086741 None:intergenic 30.0%
TGCTAATGTCATGAATCAAA+GGG + Chr8:82086582-82086601 MsG0880047111.01.T01:intron 30.0%
TGTCATAAATGACATTCTGA+TGG - Chr8:82086762-82086781 None:intergenic 30.0%
TGTCTTCAATAGTTGGAAAT+CGG - Chr8:82089153-82089172 None:intergenic 30.0%
TGTGTGTTATCTAACTTCTA+TGG + Chr8:82084749-82084768 MsG0880047111.01.T01:five_prime_UTR 30.0%
TTCTTCATGTCTTCAATAGT+TGG - Chr8:82089160-82089179 None:intergenic 30.0%
! ACTTAGGTTTGTTTGAATCA+AGG + Chr8:82085590-82085609 MsG0880047111.01.T01:intron 30.0%
! CTTAGGTTTGTTTGAATCAA+GGG + Chr8:82085591-82085610 MsG0880047111.01.T01:intron 30.0%
! GACCTTTTATCTTCTTTCAA+AGG + Chr8:82088726-82088745 MsG0880047111.01.T01:CDS 30.0%
! TGATGGTGATCAATATTGTT+TGG - Chr8:82086745-82086764 None:intergenic 30.0%
! TTTGGAATATTCCTTTACTC+AGG + Chr8:82087100-82087119 MsG0880047111.01.T01:CDS 30.0%
! TTTTCCATCTACAACTTTCA+TGG + Chr8:82088031-82088050 MsG0880047111.01.T01:intron 30.0%
!! ATAATAAAAGGCGCTTTATC+TGG + Chr8:82086173-82086192 MsG0880047111.01.T01:intron 30.0%
!! CATATTTTGAAAACCGAAAG+TGG - Chr8:82087267-82087286 None:intergenic 30.0%
!! CTATGTTTTTGAAGAGCATA+CGG - Chr8:82088270-82088289 None:intergenic 30.0%
!! TAATAAAAGGCGCTTTATCT+GGG + Chr8:82086174-82086193 MsG0880047111.01.T01:intron 30.0%
!! TTGGAGAGTATCCTATAAAA+AGG + Chr8:82089361-82089380 MsG0880047111.01.T01:CDS 30.0%
!!! TCCTCTATGTGTTGTTTTTA+AGG - Chr8:82084908-82084927 None:intergenic 30.0%
!!! TGTGTTGTTTTTAAGGAACA+TGG - Chr8:82084901-82084920 None:intergenic 30.0%
!!! TTGTTTTTTATATTGGCTGC+AGG + Chr8:82088983-82089002 MsG0880047111.01.T01:intron 30.0%
AAAAGGCCCAATGTCTTATA+TGG + Chr8:82086004-82086023 MsG0880047111.01.T01:intron 35.0%
AAAGGCCCAATGTCTTATAT+GGG + Chr8:82086005-82086024 MsG0880047111.01.T01:intron 35.0%
AAAGGTCCAAGTTAAAACAG+CGG - Chr8:82088713-82088732 None:intergenic 35.0%
AATCAATTTAAACATGCGGG+AGG - Chr8:82089230-82089249 None:intergenic 35.0%
AATGACAGAAGGGTAAAAAG+TGG - Chr8:82087435-82087454 None:intergenic 35.0%
AGAAGATGAAGAAAAAGTGG+TGG - Chr8:82084869-82084888 None:intergenic 35.0%
ATGAAAGTTTGACTCCTTGT+AGG + Chr8:82088624-82088643 MsG0880047111.01.T01:intron 35.0%
ATGCAATTGTCATGGAAAGA+AGG - Chr8:82085569-82085588 None:intergenic 35.0%
ATTCACTGTCAACAAGAATC+TGG + Chr8:82085071-82085090 MsG0880047111.01.T01:CDS 35.0%
ATTTGCCATGACAATGGAAT+GGG + Chr8:82086115-82086134 MsG0880047111.01.T01:intron 35.0%
CAATCTCATAGCAATATGCA+AGG + Chr8:82087670-82087689 MsG0880047111.01.T01:CDS 35.0%
CCAACATTCATGAAAGTTTC+TGG + Chr8:82087404-82087423 MsG0880047111.01.T01:intron 35.0%
CCAGAAACTTTCATGAATGT+TGG - Chr8:82087407-82087426 None:intergenic 35.0%
CCATGACAATTGCATAACTT+AGG + Chr8:82085574-82085593 MsG0880047111.01.T01:intron 35.0%
CCTAAGTTATGCAATTGTCA+TGG - Chr8:82085577-82085596 None:intergenic 35.0%
CGTATGCTCTTCAAAAACAT+AGG + Chr8:82088268-82088287 MsG0880047111.01.T01:intron 35.0%
CTATATGGGATAGTTGACTA+AGG + Chr8:82085525-82085544 MsG0880047111.01.T01:intron 35.0%
CTGATTATTTGCCATGACAA+TGG + Chr8:82086109-82086128 MsG0880047111.01.T01:intron 35.0%
CTGCTAATGTCATGAATCAA+AGG + Chr8:82086581-82086600 MsG0880047111.01.T01:intron 35.0%
GAACTTTACATCACATATGG+TGG + Chr8:82085410-82085429 MsG0880047111.01.T01:intron 35.0%
GAGATGTAGCAAACAATGTA+AGG - Chr8:82086369-82086388 None:intergenic 35.0%
GATTTCCGGTTCATAAGAAT+AGG + Chr8:82089086-82089105 MsG0880047111.01.T01:intron 35.0%
GCATAACGTAGGTTTGATTA+AGG + Chr8:82086053-82086072 MsG0880047111.01.T01:intron 35.0%
GGATAACTGAGTTTCCTTAT+TGG + Chr8:82086195-82086214 MsG0880047111.01.T01:intron 35.0%
GGGATATGTCTTTCCATATT+GGG - Chr8:82087598-82087617 None:intergenic 35.0%
GTAGCATTGTTACCTAATGA+AGG + Chr8:82086707-82086726 MsG0880047111.01.T01:intron 35.0%
TAGAAGTCCAAATGATTCAG+TGG + Chr8:82084966-82084985 MsG0880047111.01.T01:CDS 35.0%
TATTTGCCATGACAATGGAA+TGG + Chr8:82086114-82086133 MsG0880047111.01.T01:intron 35.0%
TCAATAGTGAATTGCACAAC+AGG - Chr8:82087989-82088008 None:intergenic 35.0%
TCTATTGAGGATGATGTTCT+TGG + Chr8:82089342-82089361 MsG0880047111.01.T01:CDS 35.0%
TGATACTACTGTGAAAGCTA+AGG - Chr8:82089053-82089072 None:intergenic 35.0%
TGCACTTTACCTAATTAGTC+AGG + Chr8:82087508-82087527 MsG0880047111.01.T01:CDS 35.0%
TTAATGACAATGCTCATTGC+TGG + Chr8:82088673-82088692 MsG0880047111.01.T01:CDS 35.0%
TTCACTGTCAACAAGAATCT+GGG + Chr8:82085072-82085091 MsG0880047111.01.T01:CDS 35.0%
! AATATGTGTTTTGCAACAGC+CGG - Chr8:82086253-82086272 None:intergenic 35.0%
! ACAACATCTATTTCTCTACG+GGG - Chr8:82087216-82087235 None:intergenic 35.0%
! ACACCTTCAATTTGAAGTGT+TGG + Chr8:82085752-82085771 MsG0880047111.01.T01:intron 35.0%
! ACTCGAAACTTTAAGAAGCT+AGG + Chr8:82086685-82086704 MsG0880047111.01.T01:intron 35.0%
! AGATCCTGGATTTTGTAATG+GGG + Chr8:82086411-82086430 MsG0880047111.01.T01:CDS 35.0%
! ATATAAGACATTGGGCCTTT+TGG - Chr8:82086005-82086024 None:intergenic 35.0%
! GACAACATCTATTTCTCTAC+GGG - Chr8:82087217-82087236 None:intergenic 35.0%
! GAGATCCTGGATTTTGTAAT+GGG + Chr8:82086410-82086429 MsG0880047111.01.T01:CDS 35.0%
! GGACAACATCTATTTCTCTA+CGG - Chr8:82087218-82087237 None:intergenic 35.0%
! TACACAATTTTCAGTCACTG+AGG + Chr8:82089286-82089305 MsG0880047111.01.T01:intron 35.0%
! TAGTTTGTAGCAGCTATGAT+CGG + Chr8:82086898-82086917 MsG0880047111.01.T01:intron 35.0%
! TGAGATCCTGGATTTTGTAA+TGG + Chr8:82086409-82086428 MsG0880047111.01.T01:CDS 35.0%
!! TGAAGGTTTTCTAGTGTTCT+TGG + Chr8:82086504-82086523 MsG0880047111.01.T01:intron 35.0%
!! TGGATTTTGTAATGGGGAAA+GGG + Chr8:82086417-82086436 MsG0880047111.01.T01:CDS 35.0%
!!! AAATGGAGTCACTTTTCTCT+CGG + Chr8:82086992-82087011 MsG0880047111.01.T01:CDS 35.0%
!!! GGAATGAAAGGTTTTGTTTG+AGG - Chr8:82084816-82084835 None:intergenic 35.0%
AAAACCTTCAGATGCAATGC+TGG - Chr8:82086494-82086513 None:intergenic 40.0%
AAACCTTCAGATGCAATGCT+GGG - Chr8:82086493-82086512 None:intergenic 40.0%
AAAGGGTTTCTTTCTTAGGC+TGG + Chr8:82086599-82086618 MsG0880047111.01.T01:intron 40.0%
AATTAGCGCTATTCGAAGTG+AGG + Chr8:82085367-82085386 MsG0880047111.01.T01:intron 40.0%
ACAAATCACCAACCCAATGA+GGG - Chr8:82086082-82086101 None:intergenic 40.0%
ACAAGCACACACACATGTAT+AGG - Chr8:82088807-82088826 None:intergenic 40.0%
ATCTTCTGCTTCTCTCAGTA+CGG - Chr8:82087543-82087562 None:intergenic 40.0%
CAACACGACATTGACACTAT+AGG + Chr8:82085658-82085677 MsG0880047111.01.T01:intron 40.0%
CATCTCTCAACAGCATCAAA+TGG - Chr8:82086796-82086815 None:intergenic 40.0%
CCAAATGATTCAGTGGATGA+TGG + Chr8:82084973-82084992 MsG0880047111.01.T01:CDS 40.0%
CCATCATCCACTGAATCATT+TGG - Chr8:82084976-82084995 None:intergenic 40.0%
CCATGACAATTGCATAACGT+AGG + Chr8:82086042-82086061 MsG0880047111.01.T01:intron 40.0%
CCTACGTTATGCAATTGTCA+TGG - Chr8:82086045-82086064 None:intergenic 40.0%
CTATAGTGTCAATGTCGTGT+TGG - Chr8:82085660-82085679 None:intergenic 40.0%
CTTTCCCCATTACAAAATCC+AGG - Chr8:82086418-82086437 None:intergenic 40.0%
GAGAAATATGGCGAGTTAGA+CGG + Chr8:82086456-82086475 MsG0880047111.01.T01:CDS 40.0%
GATGAAGAAAAAGTGGTGGT+TGG - Chr8:82084865-82084884 None:intergenic 40.0%
GCAGTCCTTTCTGATAGTAT+CGG + Chr8:82086225-82086244 MsG0880047111.01.T01:CDS 40.0%
GGGGATATGTCTTTCCATAT+TGG - Chr8:82087599-82087618 None:intergenic 40.0%
GTTTGTATCCCAAATTCCTG+AGG + Chr8:82085335-82085354 MsG0880047111.01.T01:intron 40.0%
TAAGAAGAATGCCCATGTTC+TGG - Chr8:82088170-82088189 None:intergenic 40.0%
TACAAATCACCAACCCAATG+AGG - Chr8:82086083-82086102 None:intergenic 40.0%
TACAACTCGAGTGATCAATG+AGG + Chr8:82089189-82089208 MsG0880047111.01.T01:CDS 40.0%
TGACGGAGAAGATGTTGAAA+TGG + Chr8:82086975-82086994 MsG0880047111.01.T01:CDS 40.0%
TGATTAAGGGATCCCTCATT+GGG + Chr8:82086067-82086086 MsG0880047111.01.T01:intron 40.0%
TGTTTCTCCAATTCCAGTCT+GGG + Chr8:82087568-82087587 MsG0880047111.01.T01:CDS 40.0%
TTGAATCAAGGGTCCTTCAT+TGG + Chr8:82085602-82085621 MsG0880047111.01.T01:intron 40.0%
TTGATTAAGGGATCCCTCAT+TGG + Chr8:82086066-82086085 MsG0880047111.01.T01:intron 40.0%
TTGCTTACTTGTCACCTACA+AGG - Chr8:82088641-82088660 None:intergenic 40.0%
TTGTCTGCTAAAATTGCCTC+AGG + Chr8:82085045-82085064 MsG0880047111.01.T01:CDS 40.0%
TTTGCCATGACAATGGAATG+GGG + Chr8:82086116-82086135 MsG0880047111.01.T01:intron 40.0%
! AAAGTGTTTCAACCAAGAGC+AGG - Chr8:82088369-82088388 None:intergenic 40.0%
! CAAGTCAAGTGTGCATCTTT+TGG - Chr8:82088883-82088902 None:intergenic 40.0%
! CTTTCTGATAGTATCGGATC+CGG + Chr8:82086231-82086250 MsG0880047111.01.T01:CDS 40.0%
! GTCTTTTCTCTTCAAGAAGC+TGG - Chr8:82085017-82085036 None:intergenic 40.0%
! TGTCTGTAGCTTGTCCAAAA+AGG - Chr8:82086924-82086943 None:intergenic 40.0%
! TTTGTTTGAGGTGAAAGAGG+AGG - Chr8:82084804-82084823 None:intergenic 40.0%
! TTTTTGGACAAGCTACAGAC+AGG + Chr8:82086923-82086942 MsG0880047111.01.T01:CDS 40.0%
!! CTGGATTTTGTAATGGGGAA+AGG + Chr8:82086416-82086435 MsG0880047111.01.T01:CDS 40.0%
!! GGGATTTTCAGGCTGAATTT+TGG + Chr8:82085431-82085450 MsG0880047111.01.T01:intron 40.0%
!! GTGCAATTGTTTTTCTGCTC+CGG + Chr8:82086335-82086354 MsG0880047111.01.T01:intron 40.0%
!! TAAACAGAGAATGGTGGATG+AGG + Chr8:82088460-82088479 MsG0880047111.01.T01:intron 40.0%
!! TCACATATGGTGGGATTTTC+AGG + Chr8:82085420-82085439 MsG0880047111.01.T01:intron 40.0%
!!! GGTTTTGTTTGAGGTGAAAG+AGG - Chr8:82084807-82084826 None:intergenic 40.0%
AAAGTGGACCAAGGAGACAT+GGG - Chr8:82087251-82087270 None:intergenic 45.0%
ACCCTTTGCCTCAGGAATTT+GGG - Chr8:82085346-82085365 None:intergenic 45.0%
ACCTACATACGCCTGAGTAA+AGG - Chr8:82087114-82087133 None:intergenic 45.0%
ATAGAGCGACGAATCAACAC+AGG - Chr8:82089327-82089346 None:intergenic 45.0%
ATCCCAAATTCCTGAGGCAA+AGG + Chr8:82085341-82085360 MsG0880047111.01.T01:intron 45.0%
ATGTCTCCTTGGTCCACTTT+CGG + Chr8:82087251-82087270 MsG0880047111.01.T01:intron 45.0%
CGGATCCGATACTATCAGAA+AGG - Chr8:82086233-82086252 None:intergenic 45.0%
CTAGATACTGCTGCATCTGA+CGG + Chr8:82086958-82086977 MsG0880047111.01.T01:CDS 45.0%
CTTCATTTCTTGTTGGCGTC+AGG + Chr8:82088533-82088552 MsG0880047111.01.T01:CDS 45.0%
GAAATAGCTTCCCTCAGAGA+CGG - Chr8:82085840-82085859 None:intergenic 45.0%
GACAGAAGGGTAAAAAGTGG+TGG - Chr8:82087432-82087451 None:intergenic 45.0%
GATCTCATGAAACCTCTGCT+TGG - Chr8:82089031-82089050 None:intergenic 45.0%
GCCATATTTCTCCATCAGCT+GGG - Chr8:82086448-82086467 None:intergenic 45.0%
GGACTGCAAGATACCCAATA+AGG - Chr8:82086212-82086231 None:intergenic 45.0%
GTGTTTCTCCAATTCCAGTC+TGG + Chr8:82087567-82087586 MsG0880047111.01.T01:CDS 45.0%
GTTGACAGTGAATTCACCTG+AGG - Chr8:82085064-82085083 None:intergenic 45.0%
TAGTTGGAAATCGGTCACCA+AGG - Chr8:82089144-82089163 None:intergenic 45.0%
TATGCGATACCACTGAAGCA+TGG + Chr8:82087765-82087784 MsG0880047111.01.T01:intron 45.0%
TCAAGGGTCCTTCATTGGAT+AGG + Chr8:82085607-82085626 MsG0880047111.01.T01:intron 45.0%
TCCCAAATTCCTGAGGCAAA+GGG + Chr8:82085342-82085361 MsG0880047111.01.T01:intron 45.0%
TCCCAGCTGATGGAGAAATA+TGG + Chr8:82086444-82086463 MsG0880047111.01.T01:CDS 45.0%
TCCTTTACTCAGGCGTATGT+AGG + Chr8:82087110-82087129 MsG0880047111.01.T01:intron 45.0%
TGAAAACCGAAAGTGGACCA+AGG - Chr8:82087260-82087279 None:intergenic 45.0%
TTCGAAGTTCCATGCTTCAG+TGG - Chr8:82087777-82087796 None:intergenic 45.0%
TTCGTAGGCTACCAGAACAT+GGG + Chr8:82088156-82088175 MsG0880047111.01.T01:intron 45.0%
TTGCTACATCTCCATGTGCA+GGG + Chr8:82086377-82086396 MsG0880047111.01.T01:intron 45.0%
TTTCGTAGGCTACCAGAACA+TGG + Chr8:82088155-82088174 MsG0880047111.01.T01:intron 45.0%
TTTGCTACATCTCCATGTGC+AGG + Chr8:82086376-82086395 MsG0880047111.01.T01:intron 45.0%
! ACAATGTAAGGAAGAAGCGC+CGG - Chr8:82086357-82086376 None:intergenic 45.0%
! ACTTTTCTCTCGGTTGACGT+TGG + Chr8:82087002-82087021 MsG0880047111.01.T01:CDS 45.0%
! AGTGTGCATCTTTTGGTCTG+AGG - Chr8:82088876-82088895 None:intergenic 45.0%
! ATGCAGCAGTATCTAGCTTC+TGG - Chr8:82086954-82086973 None:intergenic 45.0%
! CACATGTGTCGATGTCAATG+TGG + Chr8:82085720-82085739 MsG0880047111.01.T01:intron 45.0%
! CAGGCTGAATTTTGGACCAA+AGG + Chr8:82085439-82085458 MsG0880047111.01.T01:intron 45.0%
!! AAAGTGGTGGTTGGTTTGAG+TGG - Chr8:82084856-82084875 None:intergenic 45.0%
!! CGTGTTGGTGTCAATGTCAT+AGG - Chr8:82085645-82085664 None:intergenic 45.0%
!! GTTGATTCGTCGCTCTATTG+AGG + Chr8:82089329-82089348 MsG0880047111.01.T01:CDS 45.0%
!!! CTTCAGCCGCTGTTTTAACT+TGG + Chr8:82088704-82088723 MsG0880047111.01.T01:CDS 45.0%
!!! ATATTTTTTGTTTTTTATAT+TGG + Chr8:82088976-82088995 MsG0880047111.01.T01:intron 5.0%
!!! ATTTATTTTTATTTAAACAT+AGG - Chr8:82088765-82088784 None:intergenic 5.0%
AAAGGGCTTATCCCAGCTGA+TGG + Chr8:82086434-82086453 MsG0880047111.01.T01:CDS 50.0%
AAGACATATCCCCGCGTCAA+AGG + Chr8:82087606-82087625 MsG0880047111.01.T01:CDS 50.0%
AGTAACCTTCCTTTGACGCG+GGG - Chr8:82087618-82087637 None:intergenic 50.0%
CAGTAACCTTCCTTTGACGC+GGG - Chr8:82087619-82087638 None:intergenic 50.0%
CATATTGGGAGATCCCAGAC+TGG - Chr8:82087584-82087603 None:intergenic 50.0%
CATTTGGCAACCGTCTCTGA+GGG + Chr8:82085827-82085846 MsG0880047111.01.T01:intron 50.0%
CGCCATATTTCTCCATCAGC+TGG - Chr8:82086449-82086468 None:intergenic 50.0%
CTCTCCCCATTCCATTGTCA+TGG - Chr8:82086123-82086142 None:intergenic 50.0%
GAAAGTGGACCAAGGAGACA+TGG - Chr8:82087252-82087271 None:intergenic 50.0%
GACCCTTTGCCTCAGGAATT+TGG - Chr8:82085347-82085366 None:intergenic 50.0%
GCAGTAACCTTCCTTTGACG+CGG - Chr8:82087620-82087639 None:intergenic 50.0%
GCTAATTGACCCTTTGCCTC+AGG - Chr8:82085354-82085373 None:intergenic 50.0%
GGTTGACGTTGGACGTCATT+GGG + Chr8:82087013-82087032 MsG0880047111.01.T01:CDS 50.0%
TAAGGGATCCCTCATTGGGT+TGG + Chr8:82086071-82086090 MsG0880047111.01.T01:intron 50.0%
TCATTTGGCAACCGTCTCTG+AGG + Chr8:82085826-82085845 MsG0880047111.01.T01:intron 50.0%
TGAAACCTCTGCTTGGAGCT+TGG - Chr8:82089024-82089043 None:intergenic 50.0%
TGGAGCTTGGACATGACACT+AGG - Chr8:82089011-82089030 None:intergenic 50.0%
TGTCCCAGCATTGCATCTGA+AGG + Chr8:82086487-82086506 MsG0880047111.01.T01:CDS 50.0%
TTAAGCAGCCCATGTCTCCT+TGG + Chr8:82087240-82087259 MsG0880047111.01.T01:intron 50.0%
! AGGAGACATGGGCTGCTTAA+TGG - Chr8:82087240-82087259 None:intergenic 50.0%
! CAGTCTGGGATCTCCCAATA+TGG + Chr8:82087582-82087601 MsG0880047111.01.T01:CDS 50.0%
! GCAGCTATGATCGGCCTTTT+TGG + Chr8:82086907-82086926 MsG0880047111.01.T01:CDS 50.0%
! GGAGACATGGGCTGCTTAAT+GGG - Chr8:82087239-82087258 None:intergenic 50.0%
! GTTTGAGGTGAAAGAGGAGG+AGG - Chr8:82084801-82084820 None:intergenic 50.0%
! TCACAGGTTGACTCTGTCCT+TGG + Chr8:82089124-82089143 MsG0880047111.01.T01:CDS 50.0%
! TCTCCATGTGCAGGGTATCT+TGG + Chr8:82086385-82086404 MsG0880047111.01.T01:intron 50.0%
! TGCTGTCATTAGCCTGCTCT+TGG + Chr8:82088354-82088373 MsG0880047111.01.T01:intron 50.0%
!! GGGAGTGTCCAATGAGATTC+TGG + Chr8:82085300-82085319 MsG0880047111.01.T01:intron 50.0%
CAGCCAAGATACCCTGCACA+TGG - Chr8:82086391-82086410 None:intergenic 55.0%
CATATCCCCGCGTCAAAGGA+AGG + Chr8:82087610-82087629 MsG0880047111.01.T01:CDS 55.0%
CATGTCCAAGCTCCAAGCAG+AGG + Chr8:82089016-82089035 MsG0880047111.01.T01:CDS 55.0%
CGAATCAACACAGGCGGTTG+TGG - Chr8:82089318-82089337 None:intergenic 55.0%
CGGTTGACGTTGGACGTCAT+TGG + Chr8:82087012-82087031 MsG0880047111.01.T01:CDS 55.0%
GAGCGACGAATCAACACAGG+CGG - Chr8:82089324-82089343 None:intergenic 55.0%
GGGAGATCCCAGACTGGAAT+TGG - Chr8:82087578-82087597 None:intergenic 55.0%
GGGTATCTTGGCTGAGATCC+TGG + Chr8:82086397-82086416 MsG0880047111.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 82084698 82089386 82084698 ID=MsG0880047111.01;Name=MsG0880047111.01
Chr8 mRNA 82084698 82089386 82084698 ID=MsG0880047111.01.T01;Parent=MsG0880047111.01;Name=MsG0880047111.01.T01;_AED=0.50;_eAED=0.53;_QI=95|0.55|0.4|1|0.55|0.5|10|0|470
Chr8 exon 82084698 82085093 82084698 ID=MsG0880047111.01.T01:exon:35137;Parent=MsG0880047111.01.T01
Chr8 exon 82086206 82086300 82086206 ID=MsG0880047111.01.T01:exon:35138;Parent=MsG0880047111.01.T01
Chr8 exon 82086398 82086508 82086398 ID=MsG0880047111.01.T01:exon:35139;Parent=MsG0880047111.01.T01
Chr8 exon 82086901 82087123 82086901 ID=MsG0880047111.01.T01:exon:35140;Parent=MsG0880047111.01.T01
Chr8 exon 82087495 82087691 82087495 ID=MsG0880047111.01.T01:exon:35141;Parent=MsG0880047111.01.T01
Chr8 exon 82088467 82088562 82088467 ID=MsG0880047111.01.T01:exon:35142;Parent=MsG0880047111.01.T01
Chr8 exon 82088646 82088812 82088646 ID=MsG0880047111.01.T01:exon:35143;Parent=MsG0880047111.01.T01
Chr8 exon 82089005 82089037 82089005 ID=MsG0880047111.01.T01:exon:35144;Parent=MsG0880047111.01.T01
Chr8 exon 82089108 82089210 82089108 ID=MsG0880047111.01.T01:exon:35145;Parent=MsG0880047111.01.T01
Chr8 exon 82089300 82089386 82089300 ID=MsG0880047111.01.T01:exon:35146;Parent=MsG0880047111.01.T01
Chr8 five_prime_UTR 82084698 82084792 82084698 ID=MsG0880047111.01.T01:five_prime_utr;Parent=MsG0880047111.01.T01
Chr8 CDS 82084793 82085093 82084793 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82086206 82086300 82086206 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82086398 82086508 82086398 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82086901 82087123 82086901 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82087495 82087691 82087495 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82088467 82088562 82088467 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82088646 82088812 82088646 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82089005 82089037 82089005 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82089108 82089210 82089108 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Chr8 CDS 82089300 82089386 82089300 ID=MsG0880047111.01.T01:cds;Parent=MsG0880047111.01.T01
Gene Sequence

>MsG0880047111.01.T01

ATGCTCCTCCTCCTCTTTCACCTCAAACAAAACCTTTCATTCCAAATATATTTCATAAAACCACTCAAACCAACCACCACTTTTTCTTCATCTTCTTCTCTCTTTCCATGTTCCTTAAAAACAACACATAGAGGATCATGTTCTTCATTCATTGCATGTTCTTCTTCAAATGGTAGAAGTCCAAATGATTCAGTGGATGATGGTGTTGTTAAGAGTGTTGACCAGCTTCTTGAAGAGAAAAGACGAGCTGAATTGTCTGCTAAAATTGCCTCAGGTGAATTCACTGTCAACAAGAATCTGGTTTCCTTATTGGGTATCTTGCAGTCCTTTCTGATAGTATCGGATCCGGCTGTTGCAAAACACATATTGAAAGACAATTCAAAGGCTTATTCTAAGGGTATCTTGGCTGAGATCCTGGATTTTGTAATGGGGAAAGGGCTTATCCCAGCTGATGGAGAAATATGGCGAGTTAGACGGCGTACTATTGTCCCAGCATTGCATCTGAAGTTTGTAGCAGCTATGATCGGCCTTTTTGGACAAGCTACAGACAGGCTCTGCCAGAAGCTAGATACTGCTGCATCTGACGGAGAAGATGTTGAAATGGAGTCACTTTTCTCTCGGTTGACGTTGGACGTCATTGGGAAAGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACTGGTATAATTGAGGTAACTTTTTGGAATATTCCTTTACTCAGGCTGAAGTTAATTGTTGCACTTTACCTAATTAGTCAGGCTGTTTATACCGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCAATTCCAGTCTGGGATCTCCCAATATGGAAAGACATATCCCCGCGTCAAAGGAAGGTTACTGCAGCTCTCAAACTTGTCAATGATACACTTAACAATCTCATAGCAATATGCAAGAGAATGGTGGATGAGGAAGAGCTACAGTTTCATGAAGAGTACATGAACGAACAAGATCCAAGTATTCTTCATTTCTTGTTGGCGTCAGGAGATGATGTGACAAGTAAGCAACTACGTGACGACTTAATGACAATGCTCATTGCTGGACATGAAACTTCAGCCGCTGTTTTAACTTGGACCTTTTATCTTCTTTCAAAGGTAATAAATATGTGCCTATGTTTAAATAAAAATAAATGTGCATGTTTGTATATATACCTATACATGAGCCTAGTGTCATGTCCAAGCTCCAAGCAGAGGATAATATATACATTTTCACAGGTTGACTCTGTCCTTGGTGACCGATTTCCAACTATTGAAGACATGAAGAAACTTAAATATACAACTCGAGTGATCAATGAGTCACTGAGGCTTTATCCACAACCGCCTGTGTTGATTCGTCGCTCTATTGAGGATGATGTTCTTGGAGAGTATCCTATAAAAAGGTAA

Protein sequence

>MsG0880047111.01.T01

MLLLLFHLKQNLSFQIYFIKPLKPTTTFSSSSSLFPCSLKTTHRGSCSSFIACSSSNGRSPNDSVDDGVVKSVDQLLEEKRRAELSAKIASGEFTVNKNLVSLLGILQSFLIVSDPAVAKHILKDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRTIVPALHLKFVAAMIGLFGQATDRLCQKLDTAASDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSNDTGIIEVTFWNIPLLRLKLIVALYLISQAVYTVLREAEDRSVSPIPVWDLPIWKDISPRQRKVTAALKLVNDTLNNLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVTSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVINMCLCLNKNKCACLYIYLYMSLVSCPSSKQRIIYTFSQVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSIEDDVLGEYPIKR*