AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000445.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000445.01.T01 MTR_1g015750 98.253 229 4 0 64 292 21 249 4.01e-167 465
MsG0180000445.01.T01 MTR_1g015750 98.253 229 4 0 64 292 21 249 1.17e-165 465
MsG0180000445.01.T01 MTR_1g015750 98.253 229 4 0 64 292 29 257 1.17e-165 466
MsG0180000445.01.T01 MTR_3g105240 67.347 147 36 3 151 292 58 197 7.03e-64 201
MsG0180000445.01.T01 MTR_5g027970 30.888 259 134 7 79 292 422 680 2.27e-27 112
MsG0180000445.01.T01 MTR_6g071360 29.249 253 137 7 82 292 471 723 3.21e-25 106
MsG0180000445.01.T01 MTR_8g079010 30.000 250 136 9 82 292 375 624 5.59e-25 105
MsG0180000445.01.T01 MTR_5g018510 30.952 252 133 8 82 292 497 748 1.06e-24 104
MsG0180000445.01.T01 MTR_5g018510 31.474 251 132 9 82 292 497 747 2.33e-24 103
MsG0180000445.01.T01 MTR_1g034300 28.458 253 141 7 80 292 459 711 3.70e-23 100
MsG0180000445.01.T01 MTR_1g034300 28.346 254 141 7 80 292 459 712 5.35e-23 99.8
MsG0180000445.01.T01 MTR_5g027970 33.129 163 80 4 79 212 422 584 1.89e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000445.01.T01 AT2G26300 86.463 229 31 0 64 292 20 248 1.06e-144 412
MsG0180000445.01.T01 AT2G26300 86.463 229 31 0 64 292 20 248 1.06e-144 412
MsG0180000445.01.T01 AT1G31930 31.154 260 132 7 80 292 428 687 3.00e-29 117
MsG0180000445.01.T01 AT1G31930 31.154 260 132 7 80 292 428 687 3.00e-29 117
MsG0180000445.01.T01 AT1G31930 31.154 260 132 7 80 292 428 687 3.00e-29 117
MsG0180000445.01.T01 AT1G31930 31.154 260 132 7 80 292 428 687 3.00e-29 117
MsG0180000445.01.T01 AT1G31930 31.154 260 132 7 80 292 428 687 3.00e-29 117
MsG0180000445.01.T01 AT1G31930 31.154 260 132 7 80 292 428 687 3.00e-29 117
MsG0180000445.01.T01 AT2G23460 29.961 257 136 8 80 292 481 737 5.36e-21 93.6
MsG0180000445.01.T01 AT4G34390 25.410 244 152 7 79 293 459 701 1.08e-14 75.1
MsG0180000445.01.T01 AT4G34390 25.000 228 134 7 79 293 459 662 3.71e-12 67.4

Find 62 sgRNAs with CRISPR-Local

Find 600 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGAAAAGTTATCAGAAAT+TGG 0.258807 1:+6170857 MsG0180000445.01.T01:CDS
TGTTATATCCAGTGAAAATA+AGG 0.321185 1:+6170657 MsG0180000445.01.T01:CDS
GTGGAAGGATGCTGCAATTC+AGG 0.324847 1:+6170937 MsG0180000445.01.T01:CDS
AGATTGTACCCATTATTTCA+TGG 0.342997 1:+6171110 MsG0180000445.01.T01:CDS
TCTTACCTGCTTAAATATAG+TGG 0.358453 1:-6170252 None:intergenic
ATTTCCTCCTCTCATTTCTC+TGG 0.370893 1:-6172972 None:intergenic
AAAACGCGTCGCCTGGATAT+CGG 0.378514 1:+6164496 MsG0180000445.01.T01:CDS
GGCAAAGCACGGACAAGAAC+TGG 0.384795 1:+6164391 MsG0180000445.01.T01:CDS
AGAGAAATGAGAGGAGGAAA+TGG 0.403104 1:+6172974 MsG0180000445.01.T01:CDS
ATGAAATAATGGGTACAATC+TGG 0.415906 1:-6171108 None:intergenic
TGCAAGTTCCTTAGTGAGAC+GGG 0.426903 1:-6170897 None:intergenic
TTTCTACAGTTACTTCATGA+TGG 0.431110 1:+6170592 MsG0180000445.01.T01:intron
AACAACACAGGACCGGGGTC+GGG 0.431988 1:+6164419 MsG0180000445.01.T01:CDS
TGTGTTGCGATTAGCGAGTA+TGG 0.434486 1:+6173033 MsG0180000445.01.T01:CDS
CACCATCTTCTCCGATATCC+AGG 0.441190 1:-6164507 None:intergenic
TAAATCTTGGATACCTTTGT+TGG 0.446321 1:-6171168 None:intergenic
GACGAGAACAACACAGGACC+GGG 0.468474 1:+6164413 MsG0180000445.01.T01:CDS
AATGGGTACAATCTGGAACT+TGG 0.478299 1:-6171101 None:intergenic
GAACAACACAGGACCGGGGT+CGG 0.478362 1:+6164418 MsG0180000445.01.T01:CDS
GTGTTGTAGAGATTCAGTTC+AGG 0.503046 1:+6171727 MsG0180000445.01.T01:CDS
AAATGGATCCATCTGTTTGA+AGG 0.514605 1:+6172991 MsG0180000445.01.T01:CDS
CATATTAAAATAGAGTCAAA+TGG 0.522518 1:-6173060 None:intergenic
GTGCAAGTTCCTTAGTGAGA+CGG 0.523593 1:-6170898 None:intergenic
AAGAATAGAGTTAGAAACAA+AGG 0.526659 1:+6169164 MsG0180000445.01.T01:CDS
GAAGTCCACTATATTTAAGC+AGG 0.528141 1:+6170247 MsG0180000445.01.T01:CDS
CGCCTGGATATCGGAGAAGA+TGG 0.529333 1:+6164505 MsG0180000445.01.T01:CDS
GGAGAAGATGGTGGTGCGGA+GGG 0.535172 1:+6164517 MsG0180000445.01.T01:CDS
CTTGCAAGAGTTCGTACCAC+TGG 0.536698 1:+6171705 MsG0180000445.01.T01:CDS
CTGAAACTCCTTCAAACAGA+TGG 0.537712 1:-6172999 None:intergenic
GGACGAGAACAACACAGGAC+CGG 0.539991 1:+6164412 MsG0180000445.01.T01:CDS
AGTTATCAGAAATTGGAGGC+AGG 0.542169 1:+6170864 MsG0180000445.01.T01:CDS
ATTCAGAAACTTCTACTACT+AGG 0.546573 1:+6169198 MsG0180000445.01.T01:CDS
GACGCCGCTCGTCGCACCAC+CGG 0.548141 1:+6164542 MsG0180000445.01.T01:CDS
GGAAAATTTGCAGAGGCTGT+CGG 0.549618 1:+6171131 MsG0180000445.01.T01:CDS
TGTTCGTGTTGTCCCGACCC+CGG 0.551682 1:-6164431 None:intergenic
GGTGGTGCGACGAGCGGCGT+CGG 0.552144 1:-6164540 None:intergenic
CGGAGAAGATGGTGGTGCGG+AGG 0.565085 1:+6164516 MsG0180000445.01.T01:CDS
CACAAGAAATAGAGAGTCTG+TGG 0.566462 1:+6170918 MsG0180000445.01.T01:CDS
GTTGGAGAAAACAAGAAAAG+TGG 0.574561 1:+6172919 MsG0180000445.01.T01:CDS
TAGACATTAGCATGAATGAC+TGG 0.587415 1:-6170404 None:intergenic
TGCTAATTATGTTCCAACAA+AGG 0.590312 1:+6171155 MsG0180000445.01.T01:CDS
CATTAGCATGAATGACTGGT+AGG 0.598977 1:-6170400 None:intergenic
GTTACCGGTGGTGCGACGAG+CGG 0.600245 1:-6164546 None:intergenic
GACCGTAACATGGCAAAGCA+CGG 0.601563 1:+6164380 None:intergenic
AGAAATAGAGAGTCTGTGGA+AGG 0.613073 1:+6170922 MsG0180000445.01.T01:CDS
ATTTCAAACTGGCTTTGATG+AGG 0.616068 1:+6170361 MsG0180000445.01.T01:CDS
GTCTATAGACTGTTTGATGT+CGG 0.618439 1:+6172946 MsG0180000445.01.T01:CDS
AACTTGGAGCTCATTACCAC+GGG 0.623746 1:-6171085 None:intergenic
GAACTGGACGAGAACAACAC+AGG 0.628819 1:+6164407 MsG0180000445.01.T01:CDS
TATAGACTGTTTGATGTCGG+TGG 0.634857 1:+6172949 MsG0180000445.01.T01:CDS
GCAAGTTCCTTAGTGAGACG+GGG 0.646360 1:-6170896 None:intergenic
ATTTCATGGAAAATTTGCAG+AGG 0.651354 1:+6171124 MsG0180000445.01.T01:CDS
CTGGATATCGGAGAAGATGG+TGG 0.658902 1:+6164508 MsG0180000445.01.T01:CDS
GAACTTGGAGCTCATTACCA+CGG 0.660679 1:-6171086 None:intergenic
GAAAAGTTATCAGAAATTGG+AGG 0.672048 1:+6170860 MsG0180000445.01.T01:CDS
CTGTAGGAAACATATGCCCG+TGG 0.675146 1:+6171069 MsG0180000445.01.T01:intron
CTGAATCTCTACAACACCAG+TGG 0.677147 1:-6171721 None:intergenic
TATCGGAGAAGATGGTGGTG+CGG 0.683888 1:+6164513 MsG0180000445.01.T01:CDS
GTGGCCAGAGAAATGAGAGG+AGG 0.687189 1:+6172968 MsG0180000445.01.T01:CDS
CAAGTTCCTTAGTGAGACGG+GGG 0.693310 1:-6170895 None:intergenic
TCGGTGGCCAGAGAAATGAG+AGG 0.733004 1:+6172965 MsG0180000445.01.T01:CDS
ACGAGAACAACACAGGACCG+GGG 0.737148 1:+6164414 MsG0180000445.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTTTTTTTTAT+GGG + Chr1:6168418-6168437 MsG0180000445.01.T01:intron 0.0%
!! AAAAAAAAAAAAAACATGTA+TGG - Chr1:6168081-6168100 None:intergenic 10.0%
!! AAATATAAAAGATTTATATG+TGG + Chr1:6165627-6165646 MsG0180000445.01.T01:intron 10.0%
!! AATATAAAAGATTTATATGT+GGG + Chr1:6165628-6165647 MsG0180000445.01.T01:intron 10.0%
!! ACAATATCAATATTATTAAA+CGG + Chr1:6167712-6167731 MsG0180000445.01.T01:intron 10.0%
!! GTATAATTAATTGATATAAA+AGG - Chr1:6166773-6166792 None:intergenic 10.0%
!! TATTCATATATTTAATAATC+AGG - Chr1:6167272-6167291 None:intergenic 10.0%
!!! AATATATGTTTTTTTCTAAA+TGG - Chr1:6164731-6164750 None:intergenic 10.0%
!!! AATTTTTTTTTTTTTTATGG+GGG + Chr1:6168420-6168439 MsG0180000445.01.T01:intron 10.0%
!!! ATAAAAGTTTGTTAATTTTA+AGG - Chr1:6168187-6168206 None:intergenic 10.0%
!!! TATATGTTTTTTTCTTTTTT+TGG - Chr1:6164760-6164779 None:intergenic 10.0%
!!! TTTTACACTTTTAATTTATA+TGG - Chr1:6167603-6167622 None:intergenic 10.0%
!!! TTTTATATCAAAAATACATA+TGG - Chr1:6169842-6169861 None:intergenic 10.0%
!! AAAATAAATTATTCAATGCA+TGG + Chr1:6166285-6166304 MsG0180000445.01.T01:intron 15.0%
!! AATTATCAAACAAAATAACA+TGG - Chr1:6166128-6166147 None:intergenic 15.0%
!! ACTTGACAAAAAAAAAAAAA+AGG - Chr1:6166561-6166580 None:intergenic 15.0%
!! ATAGACTATTATAAATCTAA+CGG - Chr1:6172715-6172734 None:intergenic 15.0%
!! ATCAATTAATTATACAGAAA+TGG + Chr1:6166778-6166797 MsG0180000445.01.T01:intron 15.0%
!! GAATTTGAATAAATATTTGA+AGG - Chr1:6167237-6167256 None:intergenic 15.0%
!! TATATTTCAAAGTTGTAAAT+AGG - Chr1:6172760-6172779 None:intergenic 15.0%
!!! ATAAAACTTTTATTTCAAAC+TGG + Chr1:6170350-6170369 MsG0180000445.01.T01:CDS 15.0%
!!! CAAAATTTTATTTGGAAAAA+TGG - Chr1:6169949-6169968 None:intergenic 15.0%
!!! GTCAATTAAATTATGTTTTA+TGG - Chr1:6167694-6167713 None:intergenic 15.0%
!!! GTGTTTTTTTTTTTTTCAAT+AGG + Chr1:6164630-6164649 MsG0180000445.01.T01:intron 15.0%
!!! TTCACTTTTTTTTTTTAACT+CGG - Chr1:6168815-6168834 None:intergenic 15.0%
!!! TTTATTGAGAAATTTTATCT+GGG + Chr1:6168390-6168409 MsG0180000445.01.T01:intron 15.0%
!!! TTTTATGGATTATGATTATT+TGG + Chr1:6166878-6166897 MsG0180000445.01.T01:intron 15.0%
!! AAAAAAAAAAACATGTATGG+TGG - Chr1:6168078-6168097 None:intergenic 20.0%
!! AAACTACCATTGATATTTAA+AGG + Chr1:6166160-6166179 MsG0180000445.01.T01:intron 20.0%
!! AATACTAACAATTACAACAT+CGG - Chr1:6172530-6172549 None:intergenic 20.0%
!! AATGATAAATGTATATCGAA+AGG + Chr1:6165746-6165765 MsG0180000445.01.T01:intron 20.0%
!! ACGATAAATACAGAAAAAAT+AGG - Chr1:6167399-6167418 None:intergenic 20.0%
!! ACTTCGATAAATAAACTATA+TGG + Chr1:6166533-6166552 MsG0180000445.01.T01:intron 20.0%
!! ACTTGACAAAAACAAAAAAA+AGG - Chr1:6166621-6166640 None:intergenic 20.0%
!! ATAAATAATACACTCCAAAT+TGG - Chr1:6168559-6168578 None:intergenic 20.0%
!! ATCATACTAAATCAACTATT+AGG + Chr1:6171331-6171350 MsG0180000445.01.T01:intron 20.0%
!! ATGATAAATGTATATCGAAA+GGG + Chr1:6165747-6165766 MsG0180000445.01.T01:intron 20.0%
!! ATTGTATGAATATATGACTA+CGG - Chr1:6171619-6171638 None:intergenic 20.0%
!! ATTGTTACTATTACTATGTT+TGG + Chr1:6165294-6165313 MsG0180000445.01.T01:intron 20.0%
!! CACATATTTAAACTTATCAA+TGG + Chr1:6170195-6170214 MsG0180000445.01.T01:intron 20.0%
!! CAGATAAAATTTCTCAATAA+AGG - Chr1:6168391-6168410 None:intergenic 20.0%
!! CATATTAAAATAGAGTCAAA+TGG - Chr1:6173063-6173082 None:intergenic 20.0%
!! GATTATGAAATAATAGAATG+TGG - Chr1:6167431-6167450 None:intergenic 20.0%
!! GTAAAAAATGAAAAAGAATG+AGG - Chr1:6168040-6168059 None:intergenic 20.0%
!! GTCTTTAATAAATAAATGTG+AGG - Chr1:6167558-6167577 None:intergenic 20.0%
!! TAAAATTTCTCAATAAAGGA+TGG - Chr1:6168387-6168406 None:intergenic 20.0%
!! TAAAGAAAGTGAATAAATGA+CGG - Chr1:6171899-6171918 None:intergenic 20.0%
!! TAGACTATTATAAATCTAAC+GGG - Chr1:6172714-6172733 None:intergenic 20.0%
!! TCATAAGATATGATAGAAAT+AGG + Chr1:6171548-6171567 MsG0180000445.01.T01:intron 20.0%
!! TGTAATTGTTAGTATTATGA+TGG + Chr1:6172534-6172553 MsG0180000445.01.T01:intron 20.0%
!! TTATTGATACATATACATCA+TGG - Chr1:6165584-6165603 None:intergenic 20.0%
!! TTTAATAAATAAATGTGAGG+AGG - Chr1:6167555-6167574 None:intergenic 20.0%
!! TTTATTTATGAAGCAATACT+AGG + Chr1:6165693-6165712 MsG0180000445.01.T01:intron 20.0%
!!! AAAGAACTCACATTTTAATA+TGG + Chr1:6167451-6167470 MsG0180000445.01.T01:intron 20.0%
!!! AATTATTGATGATTTCAAGT+CGG + Chr1:6165798-6165817 MsG0180000445.01.T01:intron 20.0%
!!! AATTTCAAGTTTGACAATAA+GGG + Chr1:6172058-6172077 MsG0180000445.01.T01:intron 20.0%
!!! AATTTTATTTGGAAAAATGG+AGG - Chr1:6169946-6169965 None:intergenic 20.0%
!!! ATCTCATCTTTTAGAATTAT+TGG - Chr1:6167532-6167551 None:intergenic 20.0%
!!! ATGTATTTAGAATTCTACAT+GGG - Chr1:6172009-6172028 None:intergenic 20.0%
!!! ATTTGTATACTCATGTTTTT+GGG + Chr1:6170007-6170026 MsG0180000445.01.T01:intron 20.0%
!!! CAAATTTTCCATGAAATAAT+GGG - Chr1:6171121-6171140 None:intergenic 20.0%
!!! CTTTATTGAGAAATTTTATC+TGG + Chr1:6168389-6168408 MsG0180000445.01.T01:intron 20.0%
!!! GGTTTTAGAATAATTTGAAA+GGG + Chr1:6168614-6168633 MsG0180000445.01.T01:intron 20.0%
!!! TAATAGTTGATTTAGTATGA+TGG - Chr1:6171332-6171351 None:intergenic 20.0%
!!! TATTTGTATACTCATGTTTT+TGG + Chr1:6170006-6170025 MsG0180000445.01.T01:intron 20.0%
!!! TGGTTTTAGAATAATTTGAA+AGG + Chr1:6168613-6168632 MsG0180000445.01.T01:intron 20.0%
!!! TTTTTTAGTATTGTTGATTG+AGG + Chr1:6169979-6169998 MsG0180000445.01.T01:intron 20.0%
!!! TTTTTTTCTTTTTTTGGTAG+TGG - Chr1:6164754-6164773 None:intergenic 20.0%
! AAAAAGAATGAGGAAAATGA+GGG - Chr1:6168030-6168049 None:intergenic 25.0%
! AAACCTGCAATATTATTGAT+TGG + Chr1:6165338-6165357 MsG0180000445.01.T01:intron 25.0%
! AAAGAAAGTGAATAAATGAC+GGG - Chr1:6171898-6171917 None:intergenic 25.0%
! AAAGGAGAAACTAAATCAAT+CGG + Chr1:6166178-6166197 MsG0180000445.01.T01:intron 25.0%
! AAATGAGGGAATGAAAAAAA+TGG - Chr1:6168016-6168035 None:intergenic 25.0%
! AACAAGTCAAGTACATAATA+AGG - Chr1:6170574-6170593 None:intergenic 25.0%
! AACAATAGTATGCTAAATCT+TGG - Chr1:6171184-6171203 None:intergenic 25.0%
! AACAATTGAGACATAAATTG+AGG - Chr1:6165410-6165429 None:intergenic 25.0%
! AAGAAATTGAGAAATACTTC+TGG + Chr1:6171368-6171387 MsG0180000445.01.T01:intron 25.0%
! AAGAATAGAGTTAGAAACAA+AGG + Chr1:6169164-6169183 MsG0180000445.01.T01:CDS 25.0%
! AATCCAATCAATAATATTGC+AGG - Chr1:6165344-6165363 None:intergenic 25.0%
! AATGAGGGAATGAAAAAAAT+GGG - Chr1:6168015-6168034 None:intergenic 25.0%
! ACAGAAAACCTATATACAAT+TGG - Chr1:6170739-6170758 None:intergenic 25.0%
! AGACTATTATAAATCTAACG+GGG - Chr1:6172713-6172732 None:intergenic 25.0%
! ATAAAAACGACAACTTATAC+GGG - Chr1:6166864-6166883 None:intergenic 25.0%
! ATAAAGTAATGTTCTGCATT+CGG - Chr1:6166096-6166115 None:intergenic 25.0%
! ATAAATGTGAATTTCGTTGA+AGG + Chr1:6167650-6167669 MsG0180000445.01.T01:intron 25.0%
! ATATCAAGAAGAGATCAAAA+TGG - Chr1:6171825-6171844 None:intergenic 25.0%
! ATATCGCATATTATATGTAG+GGG - Chr1:6166711-6166730 None:intergenic 25.0%
! ATCTTCATCTTAGAATTGAA+AGG + Chr1:6165223-6165242 MsG0180000445.01.T01:intron 25.0%
! ATTAGTAGAAAAGAGAACAT+GGG + Chr1:6164892-6164911 MsG0180000445.01.T01:intron 25.0%
! CATAAAAACGACAACTTATA+CGG - Chr1:6166865-6166884 None:intergenic 25.0%
! CATTGGACTTAATTTCTTAT+TGG - Chr1:6171495-6171514 None:intergenic 25.0%
! CTAATTCAATCCTACTAAAT+CGG - Chr1:6169449-6169468 None:intergenic 25.0%
! CTGCAATGTATTATATAAGT+GGG + Chr1:6169605-6169624 MsG0180000445.01.T01:intron 25.0%
! GATATCGCATATTATATGTA+GGG - Chr1:6166712-6166731 None:intergenic 25.0%
! GCAATAGTAGAAGTTAAAAA+CGG - Chr1:6164677-6164696 None:intergenic 25.0%
! GTAGTTACAAAGGTTAAAAA+TGG + Chr1:6164933-6164952 MsG0180000445.01.T01:intron 25.0%
! GTTTCTCCTTTAAATATCAA+TGG - Chr1:6166169-6166188 None:intergenic 25.0%
! TAAAAAAAGTCGGTTAGATT+GGG + Chr1:6165836-6165855 MsG0180000445.01.T01:intron 25.0%
! TAAATTATTCAATGCATGGA+CGG + Chr1:6166289-6166308 MsG0180000445.01.T01:intron 25.0%
! TAAGAAATTAAGTCCAATGT+TGG + Chr1:6171496-6171515 MsG0180000445.01.T01:intron 25.0%
! TAGCAGTTTAGCATAATATT+TGG + Chr1:6168478-6168497 MsG0180000445.01.T01:intron 25.0%
! TATTAGTAGAAAAGAGAACA+TGG + Chr1:6164891-6164910 MsG0180000445.01.T01:intron 25.0%
! TCAATTTATGTCTCAATTGT+TGG + Chr1:6165409-6165428 MsG0180000445.01.T01:intron 25.0%
! TGTTATATCCAGTGAAAATA+AGG + Chr1:6170657-6170676 MsG0180000445.01.T01:CDS 25.0%
! TTCTTGATATGCTTATTACT+CGG + Chr1:6171835-6171854 MsG0180000445.01.T01:intron 25.0%
!! CATATATTTTATGAATCCCA+AGG + Chr1:6164774-6164793 MsG0180000445.01.T01:intron 25.0%
!! CATGTATTTAGAATTCTACA+TGG - Chr1:6172010-6172029 None:intergenic 25.0%
!! CTCATCTGCAAAATTTTATT+TGG - Chr1:6169957-6169976 None:intergenic 25.0%
!! GAATTTGAAGTTTATGATTC+AGG + Chr1:6172257-6172276 MsG0180000445.01.T01:intron 25.0%
!! GCAAATTTTCCATGAAATAA+TGG - Chr1:6171122-6171141 None:intergenic 25.0%
!! TACTACTAGGTACATTTTAT+TGG + Chr1:6169211-6169230 MsG0180000445.01.T01:intron 25.0%
!! TCATGTCTTCTAAAAAAAGT+CGG + Chr1:6165826-6165845 MsG0180000445.01.T01:intron 25.0%
!! TGCAATATTATTGATTGGAT+TGG + Chr1:6165343-6165362 MsG0180000445.01.T01:intron 25.0%
!! TGTTTAAGATTAAGGTTGAT+GGG + Chr1:6172226-6172245 MsG0180000445.01.T01:intron 25.0%
!! TGTTTTGTAGCAGAAAAAAT+GGG + Chr1:6168978-6168997 MsG0180000445.01.T01:intron 25.0%
!!! AATAGGAATAAGAGTATTAG+AGG + Chr1:6171565-6171584 MsG0180000445.01.T01:intron 25.0%
!!! AGATGTTTTTTTCTGTTTTC+TGG + Chr1:6168856-6168875 MsG0180000445.01.T01:intron 25.0%
!!! ATAGGAATAAGAGTATTAGA+GGG + Chr1:6171566-6171585 MsG0180000445.01.T01:intron 25.0%
!!! GAAAGTGCTATATTTGATTA+AGG + Chr1:6169108-6169127 MsG0180000445.01.T01:intron 25.0%
!!! GAATTTCAAGTTTGACAATA+AGG + Chr1:6172057-6172076 MsG0180000445.01.T01:intron 25.0%
!!! TAAGGTGTTTTACTATACTA+TGG + Chr1:6169777-6169796 MsG0180000445.01.T01:intron 25.0%
!!! TCTTTTAGAATTATTGGCAA+TGG - Chr1:6167526-6167545 None:intergenic 25.0%
!!! TGTTTTTGTGATTTTGCATT+TGG + Chr1:6168525-6168544 MsG0180000445.01.T01:intron 25.0%
!!! TTGTTTTTCTTCCTTTTGTT+TGG + Chr1:6168638-6168657 MsG0180000445.01.T01:intron 25.0%
!!! TTTTTTTTTAACTCGGTATC+CGG - Chr1:6168808-6168827 None:intergenic 25.0%
AAAAAAAACATGTATGGTGG+TGG - Chr1:6168075-6168094 None:intergenic 30.0%
AAAAAGTAGGTTACCTGAAA+AGG - Chr1:6168332-6168351 None:intergenic 30.0%
AAAAGCAGACAAATGAAAAC+AGG - Chr1:6171237-6171256 None:intergenic 30.0%
AAAAGTAGGTTACCTGAAAA+GGG - Chr1:6168331-6168350 None:intergenic 30.0%
AAATTATTCAATGCATGGAC+GGG + Chr1:6166290-6166309 MsG0180000445.01.T01:intron 30.0%
AAATTGCATAACAGATTGAC+AGG - Chr1:6171670-6171689 None:intergenic 30.0%
AACAATTATGTTGTTGTGCA+AGG - Chr1:6172874-6172893 None:intergenic 30.0%
AAGTGTGTACATGAATTAGT+GGG - Chr1:6168925-6168944 None:intergenic 30.0%
AATCTTAAACACACGACAAA+AGG - Chr1:6172217-6172236 None:intergenic 30.0%
AATTCTCATCTTTCCAACAT+TGG - Chr1:6171512-6171531 None:intergenic 30.0%
AATTTAATTGTGGAGAAGTG+GGG + Chr1:6166664-6166683 MsG0180000445.01.T01:intron 30.0%
ACAATTATGTTGTTGTGCAA+GGG - Chr1:6172873-6172892 None:intergenic 30.0%
ACAATTTAATTGTGGAGAAG+TGG + Chr1:6166662-6166681 MsG0180000445.01.T01:intron 30.0%
ACCATACTTGAGTCAAATAT+GGG + Chr1:6166967-6166986 MsG0180000445.01.T01:intron 30.0%
ACGGGTAAATATATGAGAAT+TGG + Chr1:6166392-6166411 MsG0180000445.01.T01:intron 30.0%
ACTAATTCATGTACACACTT+CGG + Chr1:6168925-6168944 MsG0180000445.01.T01:intron 30.0%
ACTATTAGGTTCAAGCATAA+TGG + Chr1:6171345-6171364 MsG0180000445.01.T01:intron 30.0%
AGAGCTCACAATAAACTATA+TGG + Chr1:6166593-6166612 MsG0180000445.01.T01:intron 30.0%
AGATTGTACCCATTATTTCA+TGG + Chr1:6171110-6171129 MsG0180000445.01.T01:CDS 30.0%
AGGTTGAAAAACAAGATTGA+AGG + Chr1:6165713-6165732 MsG0180000445.01.T01:intron 30.0%
ATACATTGTAGATTCCAACA+TGG - Chr1:6169305-6169324 None:intergenic 30.0%
ATCAATAGCTAAACAGAGAT+GGG - Chr1:6166912-6166931 None:intergenic 30.0%
ATGAGGGAATGAAAAAAATG+GGG - Chr1:6168014-6168033 None:intergenic 30.0%
ATGAGTATGCAATTATTTGC+AGG - Chr1:6170112-6170131 None:intergenic 30.0%
ATGCATTACAACATTTCTCT+AGG + Chr1:6166236-6166255 MsG0180000445.01.T01:intron 30.0%
ATTCAGAAACTTCTACTACT+AGG + Chr1:6169198-6169217 MsG0180000445.01.T01:CDS 30.0%
ATTTATAACAAGAGTGACAC+CGG - Chr1:6172639-6172658 None:intergenic 30.0%
ATTTCATGGAAAATTTGCAG+AGG + Chr1:6171124-6171143 MsG0180000445.01.T01:CDS 30.0%
CAAACTTGAAATTCGTAAGT+CGG - Chr1:6172051-6172070 None:intergenic 30.0%
CAAAGCTTTCTATATATGGA+GGG - Chr1:6167124-6167143 None:intergenic 30.0%
CAATTTAATTGTGGAGAAGT+GGG + Chr1:6166663-6166682 MsG0180000445.01.T01:intron 30.0%
CCACTTATATAATACATTGC+AGG - Chr1:6169607-6169626 None:intergenic 30.0%
CCTGCAATGTATTATATAAG+TGG + Chr1:6169604-6169623 MsG0180000445.01.T01:intron 30.0%
CGAAAAATCAACATCATTCT+GGG - Chr1:6170632-6170651 None:intergenic 30.0%
CGATTTAGTAGGATTGAATT+AGG + Chr1:6169447-6169466 MsG0180000445.01.T01:intron 30.0%
CGGGTAAATATATGAGAATT+GGG + Chr1:6166393-6166412 MsG0180000445.01.T01:intron 30.0%
CTAAAAAAAGTCGGTTAGAT+TGG + Chr1:6165835-6165854 MsG0180000445.01.T01:intron 30.0%
CTAAGATGAAGATCAATTAG+AGG - Chr1:6165216-6165235 None:intergenic 30.0%
GAAAAAGAATGAGGAAAATG+AGG - Chr1:6168031-6168050 None:intergenic 30.0%
GAAAAATAAGAGCAAGCAAA+TGG + Chr1:6164837-6164856 MsG0180000445.01.T01:intron 30.0%
GAAAAGTTATCAGAAATTGG+AGG + Chr1:6170860-6170879 MsG0180000445.01.T01:CDS 30.0%
GAATGCAACATGAAAAAAGT+AGG - Chr1:6168345-6168364 None:intergenic 30.0%
GAGAATCATATTTGCAATAG+TGG + Chr1:6166933-6166952 MsG0180000445.01.T01:intron 30.0%
GAGTTAGAGAAAAATGTTCT+GGG - Chr1:6166478-6166497 None:intergenic 30.0%
GATCTAACATACTTAAACCA+TGG - Chr1:6171310-6171329 None:intergenic 30.0%
GCTAAATATCTCCAAACAAA+AGG - Chr1:6168652-6168671 None:intergenic 30.0%
GGAGATTTAAAGAAAAGAAG+AGG + Chr1:6167043-6167062 MsG0180000445.01.T01:intron 30.0%
GGATATCGCATATTATATGT+AGG - Chr1:6166713-6166732 None:intergenic 30.0%
GGGAAATAAAGTAATACCAA+AGG - Chr1:6171878-6171897 None:intergenic 30.0%
GGGTAAATATATGAGAATTG+GGG + Chr1:6166394-6166413 MsG0180000445.01.T01:intron 30.0%
GGTGTAAATTGTGATAGAAA+AGG + Chr1:6171389-6171408 MsG0180000445.01.T01:intron 30.0%
TAAAGTAATGTTCTGCATTC+GGG - Chr1:6166095-6166114 None:intergenic 30.0%
TAAATCTTGGATACCTTTGT+TGG - Chr1:6171171-6171190 None:intergenic 30.0%
TAAGAAGTGAAGCGATAAAA+AGG - Chr1:6172581-6172600 None:intergenic 30.0%
TACTTAAACCATGGAACTTT+CGG - Chr1:6171301-6171320 None:intergenic 30.0%
TAGAGCAACCAATTGTATAT+AGG + Chr1:6170728-6170747 MsG0180000445.01.T01:intron 30.0%
TATTCAAAGTAAAAGATGCG+TGG - Chr1:6167100-6167119 None:intergenic 30.0%
TCAATCTGTTATGCAATTTC+AGG + Chr1:6171671-6171690 MsG0180000445.01.T01:intron 30.0%
TCGAAAAATCAACATCATTC+TGG - Chr1:6170633-6170652 None:intergenic 30.0%
TCTTACCTGCTTAAATATAG+TGG - Chr1:6170255-6170274 None:intergenic 30.0%
TGAATTCTTTGGCAAGATTT+GGG + Chr1:6172295-6172314 MsG0180000445.01.T01:intron 30.0%
TGCATTACAACATTTCTCTA+GGG + Chr1:6166237-6166256 MsG0180000445.01.T01:intron 30.0%
TGCTAATTATGTTCCAACAA+AGG + Chr1:6171155-6171174 MsG0180000445.01.T01:CDS 30.0%
TGGGTCAAAAAATTAACTCT+TGG - Chr1:6165901-6165920 None:intergenic 30.0%
TGTTGGAAAGATGAGAATTA+TGG + Chr1:6171513-6171532 MsG0180000445.01.T01:intron 30.0%
TTACTGCACTTTATTACTTG+TGG + Chr1:6171435-6171454 MsG0180000445.01.T01:intron 30.0%
TTGTTAAGTTTGCATGCTTA+TGG + Chr1:6168593-6168612 MsG0180000445.01.T01:intron 30.0%
TTTCTACAGTTACTTCATGA+TGG + Chr1:6170592-6170611 MsG0180000445.01.T01:intron 30.0%
TTTCTGTTTGTTTGTTTGTG+TGG + Chr1:6170752-6170771 MsG0180000445.01.T01:intron 30.0%
! AAAATCTAGATGTCCAGTTT+TGG + Chr1:6169536-6169555 MsG0180000445.01.T01:intron 30.0%
! AGAGTTTTTGAATGTAGTGT+AGG - Chr1:6168121-6168140 None:intergenic 30.0%
! CAATAAAAGTACGCAATACT+TGG + Chr1:6170432-6170451 MsG0180000445.01.T01:intron 30.0%
! CCTACAGAAAGTATAACATA+CGG - Chr1:6171056-6171075 None:intergenic 30.0%
! GTGTTTAAGATTAAGGTTGA+TGG + Chr1:6172225-6172244 MsG0180000445.01.T01:intron 30.0%
! GTGTTTTGTAGCAGAAAAAA+TGG + Chr1:6168977-6168996 MsG0180000445.01.T01:intron 30.0%
! GTTTTCTGTGAATTGTGTTT+TGG + Chr1:6170523-6170542 MsG0180000445.01.T01:intron 30.0%
! TGTGATTTTGCATTTGGTTA+GGG + Chr1:6168531-6168550 MsG0180000445.01.T01:intron 30.0%
! TGTTTTATCTCGTTAAGACT+AGG - Chr1:6172329-6172348 None:intergenic 30.0%
! TTCTTCTTTTGTCTTTTGTC+TGG + Chr1:6172191-6172210 MsG0180000445.01.T01:intron 30.0%
! TTGTCGTGTGTTTAAGATTA+AGG + Chr1:6172218-6172237 MsG0180000445.01.T01:intron 30.0%
! TTGTGATTTTGCATTTGGTT+AGG + Chr1:6168530-6168549 MsG0180000445.01.T01:intron 30.0%
! TTTGGAATAACTGATCAAAC+AGG + Chr1:6170031-6170050 MsG0180000445.01.T01:intron 30.0%
!! AAAAATGTGCTTTGAAAGAG+AGG + Chr1:6167022-6167041 MsG0180000445.01.T01:intron 30.0%
!! AAACATCTGCTACTTTAACT+CGG - Chr1:6168844-6168863 None:intergenic 30.0%
!! ATGAAATAATGGGTACAATC+TGG - Chr1:6171111-6171130 None:intergenic 30.0%
!! TACTAAATCGGTTTGTAAGA+CGG - Chr1:6169437-6169456 None:intergenic 30.0%
!! TATGCACTTTTTATGACCTT+GGG - Chr1:6164793-6164812 None:intergenic 30.0%
!! TCTTAGTCTTATATGCTAAG+TGG + Chr1:6169249-6169268 MsG0180000445.01.T01:intron 30.0%
!! TTATGCACTTTTTATGACCT+TGG - Chr1:6164794-6164813 None:intergenic 30.0%
!! TTCTTGTTCTTGTTTGGTTT+TGG - Chr1:6167949-6167968 None:intergenic 30.0%
!! TTGGATTGGCTTAATTGAAT+AGG + Chr1:6165357-6165376 MsG0180000445.01.T01:intron 30.0%
!!! ATACTCATGTTTTTGGGATT+TGG + Chr1:6170013-6170032 MsG0180000445.01.T01:intron 30.0%
!!! CGTATAAGTTGTCGTTTTTA+TGG + Chr1:6166863-6166882 MsG0180000445.01.T01:intron 30.0%
!!! TATCAATGGTCCCTTTTTTT+AGG + Chr1:6170209-6170228 MsG0180000445.01.T01:intron 30.0%
!!! TTTTCTTGTTTTCTCCAACA+GGG - Chr1:6172918-6172937 None:intergenic 30.0%
!!! TTTTTTTTCCGTCTCCATTA+TGG + Chr1:6169731-6169750 MsG0180000445.01.T01:intron 30.0%
AAAACCCATCAAATTGGGTT+TGG - Chr1:6165970-6165989 None:intergenic 35.0%
AAAACTGTAACTCCAAACAG+TGG - Chr1:6170508-6170527 None:intergenic 35.0%
AAAGTAATACCAAAGGCCAA+AGG - Chr1:6171871-6171890 None:intergenic 35.0%
AAAGTACGCAATACTTGGAA+AGG + Chr1:6170437-6170456 MsG0180000445.01.T01:intron 35.0%
AAAGTTGAACTTTGCCATGT+TGG + Chr1:6169288-6169307 MsG0180000445.01.T01:intron 35.0%
AAATGGATCCATCTGTTTGA+AGG + Chr1:6172991-6173010 MsG0180000445.01.T01:CDS 35.0%
AAGTACGCAATACTTGGAAA+GGG + Chr1:6170438-6170457 MsG0180000445.01.T01:intron 35.0%
AATTATTCAATGCATGGACG+GGG + Chr1:6166291-6166310 MsG0180000445.01.T01:intron 35.0%
ACAGACTACTTATGAACTCT+CGG - Chr1:6169670-6169689 None:intergenic 35.0%
ACTTATGAACTCTCGGTATT+CGG - Chr1:6169663-6169682 None:intergenic 35.0%
AGACAACACCAGTGTTTAAA+GGG - Chr1:6171945-6171964 None:intergenic 35.0%
AGGTCATTTCTCATCTAATG+TGG - Chr1:6169587-6169606 None:intergenic 35.0%
ATAGAATGAGAGAGGAAGAA+TGG - Chr1:6165146-6165165 None:intergenic 35.0%
ATCTGTTATGCAATTTCAGG+AGG + Chr1:6171674-6171693 MsG0180000445.01.T01:intron 35.0%
ATGACCGTTTCCATAAATTC+TGG + Chr1:6172440-6172459 MsG0180000445.01.T01:intron 35.0%
ATTTCATACCGAAAGTTCCA+TGG + Chr1:6171290-6171309 MsG0180000445.01.T01:intron 35.0%
CAAATCTTGCCAAAGAATTC+AGG - Chr1:6172296-6172315 None:intergenic 35.0%
CAAGTTTGACAATAAGGGAA+TGG + Chr1:6172063-6172082 MsG0180000445.01.T01:intron 35.0%
CAATTATGTTGTTGTGCAAG+GGG - Chr1:6172872-6172891 None:intergenic 35.0%
CACCAAGCTTCAAATAATGA+AGG - Chr1:6172821-6172840 None:intergenic 35.0%
CACCATACTTGAGTCAAATA+TGG + Chr1:6166966-6166985 MsG0180000445.01.T01:intron 35.0%
CATCAATAGCTAAACAGAGA+TGG - Chr1:6166913-6166932 None:intergenic 35.0%
CATCTCTGTTTAGCTATTGA+TGG + Chr1:6166911-6166930 MsG0180000445.01.T01:intron 35.0%
CCAAAGCTTTCTATATATGG+AGG - Chr1:6167125-6167144 None:intergenic 35.0%
CCGTATGTTATACTTTCTGT+AGG + Chr1:6171053-6171072 MsG0180000445.01.T01:intron 35.0%
CCTACCAGAATTTATGGAAA+CGG - Chr1:6172447-6172466 None:intergenic 35.0%
CCTCCATATATAGAAAGCTT+TGG + Chr1:6167122-6167141 MsG0180000445.01.T01:intron 35.0%
CGACCAAAGCTTTCTATATA+TGG - Chr1:6167128-6167147 None:intergenic 35.0%
CTGAATTCTTTGGCAAGATT+TGG + Chr1:6172294-6172313 MsG0180000445.01.T01:intron 35.0%
GAAATCAAGTAACCCTCAAT+CGG - Chr1:6169820-6169839 None:intergenic 35.0%
GAACATACATACATACACAC+AGG - Chr1:6167905-6167924 None:intergenic 35.0%
GAAGAAACAATGACACATAG+AGG - Chr1:6172177-6172196 None:intergenic 35.0%
GAAGTCCACTATATTTAAGC+AGG + Chr1:6170247-6170266 MsG0180000445.01.T01:CDS 35.0%
GAAGTGTGTACATGAATTAG+TGG - Chr1:6168926-6168945 None:intergenic 35.0%
GAGCTCACACAATTTAATTG+TGG + Chr1:6166654-6166673 MsG0180000445.01.T01:intron 35.0%
GATAATGCATGCTGATACAA+TGG + Chr1:6164815-6164834 MsG0180000445.01.T01:intron 35.0%
GCATTACAACATTTCTCTAG+GGG + Chr1:6166238-6166257 MsG0180000445.01.T01:intron 35.0%
GGAGTTAGAGAAAAATGTTC+TGG - Chr1:6166479-6166498 None:intergenic 35.0%
GGCGAAAAGTTATCAGAAAT+TGG + Chr1:6170857-6170876 MsG0180000445.01.T01:CDS 35.0%
GTAGTAAACCCTTTAAACAC+TGG + Chr1:6171934-6171953 MsG0180000445.01.T01:intron 35.0%
GTCAAAGATTGGAAAAAGAC+AGG - Chr1:6167927-6167946 None:intergenic 35.0%
GTCTATAGACTGTTTGATGT+CGG + Chr1:6172946-6172965 MsG0180000445.01.T01:CDS 35.0%
GTTGGAGAAAACAAGAAAAG+TGG + Chr1:6172919-6172938 MsG0180000445.01.T01:CDS 35.0%
TAGACATTAGCATGAATGAC+TGG - Chr1:6170407-6170426 None:intergenic 35.0%
TATTACTTGTGGAGATGCAT+GGG + Chr1:6171446-6171465 MsG0180000445.01.T01:intron 35.0%
TGAAGCGATAAAAAGGTCAA+AGG - Chr1:6172574-6172593 None:intergenic 35.0%
TGCTTATTACTCGGAGAAAA+TGG + Chr1:6171844-6171863 MsG0180000445.01.T01:intron 35.0%
TGTATTCAACTTCCGATTGA+GGG + Chr1:6169805-6169824 MsG0180000445.01.T01:intron 35.0%
TGTTAAAGTGAGCATATTGC+TGG + Chr1:6166210-6166229 MsG0180000445.01.T01:intron 35.0%
TTATTACTTGTGGAGATGCA+TGG + Chr1:6171445-6171464 MsG0180000445.01.T01:intron 35.0%
TTCAATTTCTCATCTCCGTT+GGG + Chr1:6166356-6166375 MsG0180000445.01.T01:intron 35.0%
TTCCATAAATTCTGGTAGGA+AGG + Chr1:6172448-6172467 MsG0180000445.01.T01:intron 35.0%
TTGAAAGATTCCTCTTGGAT+TGG + Chr1:6165659-6165678 MsG0180000445.01.T01:intron 35.0%
TTGAATGTGGGTAGTTACAA+AGG + Chr1:6164923-6164942 MsG0180000445.01.T01:intron 35.0%
TTTCTATCCATGTGTCTTGT+TGG - Chr1:6167850-6167869 None:intergenic 35.0%
TTTGGTCGTAAAGTGCATAT+TGG + Chr1:6167140-6167159 MsG0180000445.01.T01:intron 35.0%
! AAGTGCAAAGAAAGTACAAG+TGG + Chr1:6167809-6167828 MsG0180000445.01.T01:intron 35.0%
! AATTTTTCCTGACAGGACAT+TGG + Chr1:6170836-6170855 MsG0180000445.01.T01:intron 35.0%
! ATCTTTTAAGCCAATCCAAG+AGG - Chr1:6165672-6165691 None:intergenic 35.0%
! ATGGGTAGTTACTTTGAATG+TGG + Chr1:6164910-6164929 MsG0180000445.01.T01:intron 35.0%
! ATTGATGATTTCAAGTCGGT+TGG + Chr1:6165802-6165821 MsG0180000445.01.T01:intron 35.0%
! ATTTGGTTAGGGTACCAATT+TGG + Chr1:6168542-6168561 MsG0180000445.01.T01:intron 35.0%
! CACCTTCATTATTTGAAGCT+TGG + Chr1:6172816-6172835 MsG0180000445.01.T01:intron 35.0%
! CTCGTTGTAAAACTCCTTTT+TGG - Chr1:6171970-6171989 None:intergenic 35.0%
! CTCTCTTAATTTTTCCTGAC+AGG + Chr1:6170829-6170848 MsG0180000445.01.T01:intron 35.0%
! CTTAGTCCTTCGATGTTTTT+CGG + Chr1:6171007-6171026 MsG0180000445.01.T01:intron 35.0%
! GATGACAGTTTTCTCCATAA+TGG - Chr1:6169748-6169767 None:intergenic 35.0%
! GCTATGCTAGTTCTCTTATT+AGG + Chr1:6168889-6168908 MsG0180000445.01.T01:intron 35.0%
! GTCTTACAAACCGATTTAGT+AGG + Chr1:6169436-6169455 MsG0180000445.01.T01:intron 35.0%
! TAAGCTAGCTTATAGCTTGT+TGG - Chr1:6165093-6165112 None:intergenic 35.0%
! TAGAGAAAAATGTTCTGGGT+GGG - Chr1:6166474-6166493 None:intergenic 35.0%
! TGGGTAGTTACTTTGAATGT+GGG + Chr1:6164911-6164930 MsG0180000445.01.T01:intron 35.0%
! TTAGAGAAAAATGTTCTGGG+TGG - Chr1:6166475-6166494 None:intergenic 35.0%
! TTCACTATGCTGTGTTTCTA+AGG + Chr1:6172100-6172119 MsG0180000445.01.T01:intron 35.0%
! TTGAGAAATTTTATCTGGGC+TGG + Chr1:6168394-6168413 MsG0180000445.01.T01:intron 35.0%
! TTTTCCCCGATTTCAAAACA+CGG + Chr1:6166012-6166031 MsG0180000445.01.T01:intron 35.0%
!! ACTAAATCGGTTTGTAAGAC+GGG - Chr1:6169436-6169455 None:intergenic 35.0%
!! AGTTTTCTCCATAATGGAGA+CGG - Chr1:6169742-6169761 None:intergenic 35.0%
!! ATTTCAAACTGGCTTTGATG+AGG + Chr1:6170361-6170380 MsG0180000445.01.T01:CDS 35.0%
!! CACTTTTGAAAGATTCCTCT+TGG + Chr1:6165654-6165673 MsG0180000445.01.T01:intron 35.0%
!! CAGTGTTGGCATCATTATAA+CGG - Chr1:6169025-6169044 None:intergenic 35.0%
!! GAATAAGAGTATTAGAGGGA+AGG + Chr1:6171570-6171589 MsG0180000445.01.T01:intron 35.0%
!! GAGTGTTCTAGAAATCTACA+TGG - Chr1:6167364-6167383 None:intergenic 35.0%
!! TAACGAGAGCATTGAATGTT+TGG - Chr1:6169711-6169730 None:intergenic 35.0%
!! TGTTCTAGAAATCTACATGG+AGG - Chr1:6167361-6167380 None:intergenic 35.0%
!!! CTTTTCTTGTTTTCTCCAAC+AGG - Chr1:6172919-6172938 None:intergenic 35.0%
!!! GTTTGGTTTTGGTCAAAGAT+TGG - Chr1:6167938-6167957 None:intergenic 35.0%
!!! GTTTTTTCCAACAAGACACA+TGG + Chr1:6167840-6167859 MsG0180000445.01.T01:intron 35.0%
!!! TTAATTTTTTGACCCACCCT+AGG + Chr1:6165905-6165924 MsG0180000445.01.T01:intron 35.0%
!!! TTGACGTACCTTATTTTCAC+TGG - Chr1:6170668-6170687 None:intergenic 35.0%
!!! TTTTTTGTCAAGTAGCCTAG+TGG + Chr1:6166568-6166587 MsG0180000445.01.T01:intron 35.0%
AAAAGGATCACACAGACTTG+AGG + Chr1:6171406-6171425 MsG0180000445.01.T01:intron 40.0%
AAACCCAAACCCAGTCAAAA+CGG - Chr1:6165995-6166014 None:intergenic 40.0%
AAAGACCCAACCAACTAATC+CGG - Chr1:6168782-6168801 None:intergenic 40.0%
AAAGGATCACACAGACTTGA+GGG + Chr1:6171407-6171426 MsG0180000445.01.T01:intron 40.0%
AAATTCTGGTAGGAAGGACA+AGG + Chr1:6172454-6172473 MsG0180000445.01.T01:intron 40.0%
ACCGGTAACAAACATCTACA+TGG + Chr1:6164560-6164579 MsG0180000445.01.T01:intron 40.0%
ACTCTCCAGCTCCTAAAAAA+AGG - Chr1:6170223-6170242 None:intergenic 40.0%
ACTGTCATCTTTGCAGCATA+AGG + Chr1:6169759-6169778 MsG0180000445.01.T01:intron 40.0%
AGAAATAGAGAGTCTGTGGA+AGG + Chr1:6170922-6170941 MsG0180000445.01.T01:CDS 40.0%
AGAGAAATGAGAGGAGGAAA+TGG + Chr1:6172974-6172993 MsG0180000445.01.T01:CDS 40.0%
AGTTATCAGAAATTGGAGGC+AGG + Chr1:6170864-6170883 MsG0180000445.01.T01:CDS 40.0%
AGTTCATAAGTAGTCTGTGC+AGG + Chr1:6169672-6169691 MsG0180000445.01.T01:intron 40.0%
ATGAGAATTGGGGATAGAGA+CGG + Chr1:6166404-6166423 MsG0180000445.01.T01:intron 40.0%
ATTATGCAGCGGAAATGACA+TGG - Chr1:6165492-6165511 None:intergenic 40.0%
ATTTCCTCCTCTCATTTCTC+TGG - Chr1:6172975-6172994 None:intergenic 40.0%
CAACACTGAAGAAAATGCAC+AGG + Chr1:6169037-6169056 MsG0180000445.01.T01:intron 40.0%
CACAAGAAATAGAGAGTCTG+TGG + Chr1:6170918-6170937 MsG0180000445.01.T01:CDS 40.0%
CAGACAACACCAGTGTTTAA+AGG - Chr1:6171946-6171965 None:intergenic 40.0%
CATATTATATGTAGGGGTCG+GGG - Chr1:6166705-6166724 None:intergenic 40.0%
CATTAGCATGAATGACTGGT+AGG - Chr1:6170403-6170422 None:intergenic 40.0%
CCAAAGCAATAGAATGAGAG+AGG - Chr1:6165154-6165173 None:intergenic 40.0%
CCGTTTCCATAAATTCTGGT+AGG + Chr1:6172444-6172463 MsG0180000445.01.T01:intron 40.0%
CCTCTCTCATTCTATTGCTT+TGG + Chr1:6165151-6165170 MsG0180000445.01.T01:intron 40.0%
CGAACCAAACCCAATTTGAT+GGG + Chr1:6165963-6165982 MsG0180000445.01.T01:intron 40.0%
CGATTTCAAAACACGGGTAT+GGG + Chr1:6166019-6166038 MsG0180000445.01.T01:intron 40.0%
CGCATATTATATGTAGGGGT+CGG - Chr1:6166707-6166726 None:intergenic 40.0%
CTCTCCAGCTCCTAAAAAAA+GGG - Chr1:6170222-6170241 None:intergenic 40.0%
CTGAAACTCCTTCAAACAGA+TGG - Chr1:6173002-6173021 None:intergenic 40.0%
CTGATACCGAAAAACATCGA+AGG - Chr1:6171016-6171035 None:intergenic 40.0%
CTGTATTTAGCCCATTAGTC+AGG + Chr1:6172687-6172706 MsG0180000445.01.T01:intron 40.0%
CTTATGAACTCTCGGTATTC+GGG - Chr1:6169662-6169681 None:intergenic 40.0%
GAAACACAGCATAGTGAAGA+AGG - Chr1:6172098-6172117 None:intergenic 40.0%
GAAAGCTTGAATAACCACAG+AGG + Chr1:6165436-6165455 MsG0180000445.01.T01:intron 40.0%
GAACAAACTCAGAACAGTGA+TGG - Chr1:6166500-6166519 None:intergenic 40.0%
GAACCAATCTGATTATGCAG+CGG - Chr1:6165503-6165522 None:intergenic 40.0%
GAGCAAGGAATTCAAAGGAT+TGG + Chr1:6165524-6165543 MsG0180000445.01.T01:intron 40.0%
GCATATTATATGTAGGGGTC+GGG - Chr1:6166706-6166725 None:intergenic 40.0%
GCCCATATTTGACTCAAGTA+TGG - Chr1:6166971-6166990 None:intergenic 40.0%
GCTACAAGCTATAAGCTCAA+AGG + Chr1:6164971-6164990 MsG0180000445.01.T01:intron 40.0%
GGGATAGTTGGCTATTGATA+TGG + Chr1:6169878-6169897 MsG0180000445.01.T01:intron 40.0%
GTCCTTCCTACCAGAATTTA+TGG - Chr1:6172453-6172472 None:intergenic 40.0%
GTGTATTCAACTTCCGATTG+AGG + Chr1:6169804-6169823 MsG0180000445.01.T01:intron 40.0%
GTGTTGTAGAGATTCAGTTC+AGG + Chr1:6171727-6171746 MsG0180000445.01.T01:CDS 40.0%
GTTCAATTTCTCATCTCCGT+TGG + Chr1:6166355-6166374 MsG0180000445.01.T01:intron 40.0%
GTTCAGAGCAAGGAATTCAA+AGG + Chr1:6165519-6165538 MsG0180000445.01.T01:intron 40.0%
TACTCAGAGAAACGCGTATT+CGG + Chr1:6171787-6171806 MsG0180000445.01.T01:intron 40.0%
TATAGACTGTTTGATGTCGG+TGG + Chr1:6172949-6172968 MsG0180000445.01.T01:CDS 40.0%
TCAAGAGGTTAGGACAAAGA+GGG + Chr1:6164589-6164608 MsG0180000445.01.T01:intron 40.0%
TCTGATACCACTTGGAATTC+AGG - Chr1:6169478-6169497 None:intergenic 40.0%
TGCTAGTTGCCTGAATTCTT+TGG + Chr1:6172284-6172303 MsG0180000445.01.T01:intron 40.0%
TGTTAGTATTATGATGGCCG+TGG + Chr1:6172540-6172559 MsG0180000445.01.T01:intron 40.0%
TTTCCCCGATTTCAAAACAC+GGG + Chr1:6166013-6166032 MsG0180000445.01.T01:intron 40.0%
TTTCCGCTGCATAATCAGAT+TGG + Chr1:6165497-6165516 MsG0180000445.01.T01:intron 40.0%
TTTGTCACATTGTGGGTCTT+GGG + Chr1:6171254-6171273 MsG0180000445.01.T01:intron 40.0%
! AAAAATGTTCTGGGTGGGTT+AGG - Chr1:6166469-6166488 None:intergenic 40.0%
! AAAACCATGCCTGAGCTTTT+GGG + Chr1:6169858-6169877 MsG0180000445.01.T01:intron 40.0%
! AATCAGATTGGTTCAGAGCA+AGG + Chr1:6165509-6165528 MsG0180000445.01.T01:intron 40.0%
! AATGGGTACAATCTGGAACT+TGG - Chr1:6171104-6171123 None:intergenic 40.0%
! ATAAGTGCAAAGCACTAACG+CGG + Chr1:6164864-6164883 MsG0180000445.01.T01:intron 40.0%
! ATGCTGTGTTTCTAAGGATC+AGG + Chr1:6172106-6172125 MsG0180000445.01.T01:intron 40.0%
! ATGTAGATGTTTGTTACCGG+TGG - Chr1:6164561-6164580 None:intergenic 40.0%
! CATCAAATTGGGTTTGGTTC+GGG - Chr1:6165964-6165983 None:intergenic 40.0%
! CCATCAAATTGGGTTTGGTT+CGG - Chr1:6165965-6165984 None:intergenic 40.0%
! CTAGATTTTTACCCGAAAGC+AGG - Chr1:6169525-6169544 None:intergenic 40.0%
! CTGTGCATTTTCTTCAGTGT+TGG - Chr1:6169039-6169058 None:intergenic 40.0%
! GATTAGTTGGTTGGGTCTTT+GGG + Chr1:6168782-6168801 MsG0180000445.01.T01:intron 40.0%
! GCCATGTAGATGTTTGTTAC+CGG - Chr1:6164564-6164583 None:intergenic 40.0%
! GGCTTGTTCTTGTTCTTGTT+TGG - Chr1:6167955-6167974 None:intergenic 40.0%
! GTTTTTGTCAAGTAGCCTAG+TGG + Chr1:6166628-6166647 MsG0180000445.01.T01:intron 40.0%
! TAAAACCATGCCTGAGCTTT+TGG + Chr1:6169857-6169876 MsG0180000445.01.T01:intron 40.0%
! TAACAACAACGACCCTTTTC+AGG + Chr1:6168316-6168335 MsG0180000445.01.T01:intron 40.0%
! TGCAAAGAAAGTACAAGTGG+TGG + Chr1:6167812-6167831 MsG0180000445.01.T01:intron 40.0%
! TTTTGTCACATTGTGGGTCT+TGG + Chr1:6171253-6171272 MsG0180000445.01.T01:intron 40.0%
!! CTAAATCGGTTTGTAAGACG+GGG - Chr1:6169435-6169454 None:intergenic 40.0%
!! GGATTAGCTTATAAGCTCGT+TGG - Chr1:6165072-6165091 None:intergenic 40.0%
!! GTCTGCTTTTGTCACATTGT+GGG + Chr1:6171247-6171266 MsG0180000445.01.T01:intron 40.0%
!! TAAAGAAAAAGAGCGCCGAA+AGG - Chr1:6167990-6168009 None:intergenic 40.0%
!! TAAATCGGTTTGTAAGACGG+GGG - Chr1:6169434-6169453 None:intergenic 40.0%
!! TGTCTGCTTTTGTCACATTG+TGG + Chr1:6171246-6171265 MsG0180000445.01.T01:intron 40.0%
!!! ATACCCGTGTTTTGAAATCG+GGG - Chr1:6166019-6166038 None:intergenic 40.0%
!!! ATGTCCAGTTTTGGACATGA+CGG + Chr1:6169545-6169564 MsG0180000445.01.T01:intron 40.0%
!!! CATACCCGTGTTTTGAAATC+GGG - Chr1:6166020-6166039 None:intergenic 40.0%
!!! CCATACCCGTGTTTTGAAAT+CGG - Chr1:6166021-6166040 None:intergenic 40.0%
!!! GAATTGTGTTTTGGTTGAGC+TGG + Chr1:6170532-6170551 MsG0180000445.01.T01:intron 40.0%
!!! TGTTATTTTGACAGCCCTGT+TGG + Chr1:6172901-6172920 MsG0180000445.01.T01:intron 40.0%
!!! TTTTTTAGGAGCTGGAGAGT+CGG + Chr1:6170223-6170242 MsG0180000445.01.T01:intron 40.0%
AACCCAAACCCAGTCAAAAC+GGG - Chr1:6165994-6166013 None:intergenic 45.0%
AACTTGGAGCTCATTACCAC+GGG - Chr1:6171088-6171107 None:intergenic 45.0%
AAGACCCAACCAACTAATCC+GGG - Chr1:6168781-6168800 None:intergenic 45.0%
AATCCCTCAGTACACTAAGG+GGG - Chr1:6168753-6168772 None:intergenic 45.0%
ACAAAGAGGGGTTTCTTAGG+AGG + Chr1:6164602-6164621 MsG0180000445.01.T01:intron 45.0%
ACACGCACAGTGCTAAGATA+CGG - Chr1:6170291-6170310 None:intergenic 45.0%
ACCAATCCCTCAGTACACTA+AGG - Chr1:6168756-6168775 None:intergenic 45.0%
ACGGGGAAAACCCATCAAAT+TGG - Chr1:6165976-6165995 None:intergenic 45.0%
ACTCGGAGAAAATGGTCCTT+TGG + Chr1:6171852-6171871 MsG0180000445.01.T01:intron 45.0%
AGAGCCTATCCAAGATCCAT+TGG + Chr1:6169495-6169514 MsG0180000445.01.T01:intron 45.0%
AGGACAAAGAGGGGTTTCTT+AGG + Chr1:6164599-6164618 MsG0180000445.01.T01:intron 45.0%
ATGATCAACTCGTGACCACT+TGG - Chr1:6169918-6169937 None:intergenic 45.0%
ATGGCTTCAGTCAAGAGGTT+AGG + Chr1:6164579-6164598 MsG0180000445.01.T01:intron 45.0%
ATTCATGTACACACTTCGGC+TGG + Chr1:6168929-6168948 MsG0180000445.01.T01:intron 45.0%
CAAGAGGTTAGGACAAAGAG+GGG + Chr1:6164590-6164609 MsG0180000445.01.T01:intron 45.0%
CAATCCCTCAGTACACTAAG+GGG - Chr1:6168754-6168773 None:intergenic 45.0%
CAATTATGTGCGTGAGTTCG+AGG + Chr1:6167772-6167791 MsG0180000445.01.T01:intron 45.0%
CACCAAACCAACCTTACATC+CGG + Chr1:6172617-6172636 MsG0180000445.01.T01:intron 45.0%
CCAATCCCTCAGTACACTAA+GGG - Chr1:6168755-6168774 None:intergenic 45.0%
CCGAACCAAACCCAATTTGA+TGG + Chr1:6165962-6165981 MsG0180000445.01.T01:intron 45.0%
CCGATTTCAAAACACGGGTA+TGG + Chr1:6166018-6166037 MsG0180000445.01.T01:intron 45.0%
CGGGGAAAACCCATCAAATT+GGG - Chr1:6165975-6165994 None:intergenic 45.0%
CTCGTTAAGACTAGGAACAC+CGG - Chr1:6172321-6172340 None:intergenic 45.0%
CTGAATCTCTACAACACCAG+TGG - Chr1:6171724-6171743 None:intergenic 45.0%
CTTGAAATTCGTAAGTCGGC+AGG - Chr1:6172047-6172066 None:intergenic 45.0%
GAACTTGGAGCTCATTACCA+CGG - Chr1:6171089-6171108 None:intergenic 45.0%
GAGGAAGAATGGAGTGATTG+AGG - Chr1:6165135-6165154 None:intergenic 45.0%
GCAATGGTGTGATGATTGTG+AGG - Chr1:6167510-6167529 None:intergenic 45.0%
GCATAGTGAAGAAGGAACAC+TGG - Chr1:6172090-6172109 None:intergenic 45.0%
GCCTTACCAGAATCACCTTT+CGG + Chr1:6167972-6167991 MsG0180000445.01.T01:intron 45.0%
GCTTGAATAACCACAGAGGA+TGG + Chr1:6165440-6165459 MsG0180000445.01.T01:intron 45.0%
GGAAAATTTGCAGAGGCTGT+CGG + Chr1:6171131-6171150 MsG0180000445.01.T01:CDS 45.0%
GGATGAAAACGTGACGTGTT+TGG - Chr1:6165051-6165070 None:intergenic 45.0%
GGCATAACCTGAATTCCAAG+TGG + Chr1:6169468-6169487 MsG0180000445.01.T01:intron 45.0%
GTAATGTTCTGCATTCGGGA+CGG - Chr1:6166091-6166110 None:intergenic 45.0%
GTATCAAGCTTCTGACCAAG+TGG + Chr1:6169900-6169919 MsG0180000445.01.T01:intron 45.0%
GTCAAGAGGTTAGGACAAAG+AGG + Chr1:6164588-6164607 MsG0180000445.01.T01:intron 45.0%
GTGCAAGTTCCTTAGTGAGA+CGG - Chr1:6170901-6170920 None:intergenic 45.0%
TCTACATGGCTTCAGTCAAG+AGG + Chr1:6164574-6164593 MsG0180000445.01.T01:intron 45.0%
TGAGAATTGGGGATAGAGAC+GGG + Chr1:6166405-6166424 MsG0180000445.01.T01:intron 45.0%
TGCAAGTTCCTTAGTGAGAC+GGG - Chr1:6170900-6170919 None:intergenic 45.0%
TGGTCCAATGGATCTTGGAT+AGG - Chr1:6169502-6169521 None:intergenic 45.0%
TGTGTTGCGATTAGCGAGTA+TGG + Chr1:6173033-6173052 MsG0180000445.01.T01:CDS 45.0%
TGTTTGCAGTGTCCACTGTT+TGG + Chr1:6170493-6170512 MsG0180000445.01.T01:intron 45.0%
TTCAAAACACGGGTATGGGA+CGG + Chr1:6166023-6166042 MsG0180000445.01.T01:intron 45.0%
TTCTCATCTCCGTTGGGTAT+GGG + Chr1:6166362-6166381 MsG0180000445.01.T01:intron 45.0%
TTCTTTGGCAAGATTTGGGC+CGG + Chr1:6172299-6172318 MsG0180000445.01.T01:intron 45.0%
TTTCTCATCTCCGTTGGGTA+TGG + Chr1:6166361-6166380 MsG0180000445.01.T01:intron 45.0%
! GAAAATGGTCCTTTGGCCTT+TGG + Chr1:6171859-6171878 MsG0180000445.01.T01:intron 45.0%
! GATTTTTACCCGAAAGCAGG+TGG - Chr1:6169522-6169541 None:intergenic 45.0%
! GCTTTGCTTTGGCTTCGATT+AGG + Chr1:6168727-6168746 MsG0180000445.01.T01:intron 45.0%
! GTGACGCGATTTTCTTCTGT+CGG - Chr1:6164470-6164489 None:intergenic 45.0%
! TATTGTGAGCTCTAGCCACT+AGG - Chr1:6166586-6166605 None:intergenic 45.0%
! TTTGAGACATCCATCCTCTG+TGG - Chr1:6165453-6165472 None:intergenic 45.0%
! TTTGTTGTCATGCCTAGGGT+GGG - Chr1:6165920-6165939 None:intergenic 45.0%
!! AGCCAAAGCAAAGCTCTGAA+CGG - Chr1:6168721-6168740 None:intergenic 45.0%
!! ATGGTGGTGGTTGTTGAAAC+TGG - Chr1:6168062-6168081 None:intergenic 45.0%
!! CTGGTGTTGTCTGACCAAAA+AGG + Chr1:6171953-6171972 MsG0180000445.01.T01:intron 45.0%
!! GGATTAGTTGGTTGGGTCTT+TGG + Chr1:6168781-6168800 MsG0180000445.01.T01:intron 45.0%
!! TTTTGTTGTCATGCCTAGGG+TGG - Chr1:6165921-6165940 None:intergenic 45.0%
!! TTTTTAGGAGCTGGAGAGTC+GGG + Chr1:6170224-6170243 MsG0180000445.01.T01:intron 45.0%
!!! GGGTTTTGTTGTCATGCCTA+GGG - Chr1:6165924-6165943 None:intergenic 45.0%
!!! TGGGTTTTGTTGTCATGCCT+AGG - Chr1:6165925-6165944 None:intergenic 45.0%
!!! TGGTCCCTTTTTTTAGGAGC+TGG + Chr1:6170215-6170234 MsG0180000445.01.T01:intron 45.0%
!!! TGTCCAGTTTTGGACATGAC+GGG + Chr1:6169546-6169565 MsG0180000445.01.T01:intron 45.0%
!! AATAATAATAAATTAAGATT+AGG - Chr1:6168160-6168179 None:intergenic 5.0%
!! ATAAATAAATGATATAATAT+TGG + Chr1:6165556-6165575 MsG0180000445.01.T01:intron 5.0%
!!! CTTAATTTTTTTTTTTTTTA+TGG + Chr1:6168417-6168436 MsG0180000445.01.T01:intron 5.0%
!!! TAATTTTTTTTTTTTTTATG+GGG + Chr1:6168419-6168438 MsG0180000445.01.T01:intron 5.0%
AAAACGCGTCGCCTGGATAT+CGG + Chr1:6164496-6164515 MsG0180000445.01.T01:CDS 50.0%
AAGAGGGGTTTCTTAGGAGG+CGG + Chr1:6164605-6164624 MsG0180000445.01.T01:intron 50.0%
ACACCCGTCATGTCCAAAAC+TGG - Chr1:6169552-6169571 None:intergenic 50.0%
ACCCAAACCCAGTCAAAACG+GGG - Chr1:6165993-6166012 None:intergenic 50.0%
AGACCCAACCAACTAATCCG+GGG - Chr1:6168780-6168799 None:intergenic 50.0%
AGTGACACCGGATGTAAGGT+TGG - Chr1:6172627-6172646 None:intergenic 50.0%
ATCTAACGGGGCCTGACTAA+TGG - Chr1:6172701-6172720 None:intergenic 50.0%
ATCTCCGTTGGGTATGGGTA+GGG + Chr1:6166367-6166386 MsG0180000445.01.T01:intron 50.0%
CAAGAGTGACACCGGATGTA+AGG - Chr1:6172631-6172650 None:intergenic 50.0%
CAAGTTCCTTAGTGAGACGG+GGG - Chr1:6170898-6170917 None:intergenic 50.0%
CACCATCTTCTCCGATATCC+AGG - Chr1:6164510-6164529 None:intergenic 50.0%
CCCTTAGTGTACTGAGGGAT+TGG + Chr1:6168752-6168771 MsG0180000445.01.T01:intron 50.0%
CTATCCCAAAAGCTCAGGCA+TGG - Chr1:6169865-6169884 None:intergenic 50.0%
CTGGATATCGGAGAAGATGG+TGG + Chr1:6164508-6164527 MsG0180000445.01.T01:CDS 50.0%
CTGTAGGAAACATATGCCCG+TGG + Chr1:6171069-6171088 MsG0180000445.01.T01:intron 50.0%
CTTGCAAGAGTTCGTACCAC+TGG + Chr1:6171705-6171724 MsG0180000445.01.T01:CDS 50.0%
GAACTGGACGAGAACAACAC+AGG + Chr1:6164407-6164426 MsG0180000445.01.T01:CDS 50.0%
GACAACAAAACCCATACCCG+TGG + Chr1:6165931-6165950 MsG0180000445.01.T01:intron 50.0%
GAGAATTGGGGATAGAGACG+GGG + Chr1:6166406-6166425 MsG0180000445.01.T01:intron 50.0%
GATGCATGGGACTGAATGCT+AGG + Chr1:6171459-6171478 MsG0180000445.01.T01:intron 50.0%
GCAAGTTCCTTAGTGAGACG+GGG - Chr1:6170899-6170918 None:intergenic 50.0%
GCCAACTATCCCAAAAGCTC+AGG - Chr1:6169870-6169889 None:intergenic 50.0%
GCCGAAAGGTGATTCTGGTA+AGG - Chr1:6167976-6167995 None:intergenic 50.0%
GGAGTGATTGAGGCTGTGTT+TGG - Chr1:6165125-6165144 None:intergenic 50.0%
GGGACGGGTAACAGGTATAT+AGG + Chr1:6166039-6166058 MsG0180000445.01.T01:intron 50.0%
GGTCAAAGGTTCGATCACCA+CGG - Chr1:6172560-6172579 None:intergenic 50.0%
GTCCGTTCAGAGCTTTGCTT+TGG + Chr1:6168716-6168735 MsG0180000445.01.T01:intron 50.0%
GTGGAAGGATGCTGCAATTC+AGG + Chr1:6170937-6170956 MsG0180000445.01.T01:CDS 50.0%
GTTACCCTACCCATACCCAA+CGG - Chr1:6166374-6166393 None:intergenic 50.0%
GTTAGGCATGACAATGGGGT+GGG - Chr1:6166452-6166471 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAA+CGG + Chr1:6166373-6166392 MsG0180000445.01.T01:intron 50.0%
TACCAGCTGAGCTATGCTCA+CGG + Chr1:6166734-6166753 MsG0180000445.01.T01:intron 50.0%
TCAAAACACGGGTATGGGAC+GGG + Chr1:6166024-6166043 MsG0180000445.01.T01:intron 50.0%
TCCATTGGACCACCTGCTTT+CGG + Chr1:6169510-6169529 MsG0180000445.01.T01:intron 50.0%
TCTAACGGGGCCTGACTAAT+GGG - Chr1:6172700-6172719 None:intergenic 50.0%
TGAACTCTCGGTATTCGGGT+TGG - Chr1:6169658-6169677 None:intergenic 50.0%
TGAGCATAGCTCAGCTGGTA+GGG - Chr1:6166734-6166753 None:intergenic 50.0%
TGATTACCCCCGTCTCACTA+AGG + Chr1:6170889-6170908 MsG0180000445.01.T01:CDS 50.0%
TTAGGCATGACAATGGGGTG+GGG - Chr1:6166451-6166470 None:intergenic 50.0%
TTGGGTATGGGTAGGGTAAC+GGG + Chr1:6166374-6166393 MsG0180000445.01.T01:intron 50.0%
! CACCGGATGTAAGGTTGGTT+TGG - Chr1:6172622-6172641 None:intergenic 50.0%
! CTTTTCGCCAATGTCCTGTC+AGG - Chr1:6170846-6170865 None:intergenic 50.0%
! GAACTCTCGGTATTCGGGTT+GGG - Chr1:6169657-6169676 None:intergenic 50.0%
! GGATAGGCTCTGATACCACT+TGG - Chr1:6169486-6169505 None:intergenic 50.0%
! TATCGGAGAAGATGGTGGTG+CGG + Chr1:6164513-6164532 MsG0180000445.01.T01:CDS 50.0%
! TCTGCATTCGGGACGGATTT+GGG - Chr1:6166084-6166103 None:intergenic 50.0%
! TTCTGCATTCGGGACGGATT+TGG - Chr1:6166085-6166104 None:intergenic 50.0%
! TTGTGTGAGCTCTAGCCACT+AGG - Chr1:6166646-6166665 None:intergenic 50.0%
!! AAGCAAAGCTCTGAACGGAC+TGG - Chr1:6168716-6168735 None:intergenic 50.0%
!! CGGATGTAAGGTTGGTTTGG+TGG - Chr1:6172619-6172638 None:intergenic 50.0%
!! GGTGGGTTAGGCATGACAAT+GGG - Chr1:6166457-6166476 None:intergenic 50.0%
!! GTAAGGTTGGTTTGGTGGCT+GGG - Chr1:6172614-6172633 None:intergenic 50.0%
!! GTGGGTTAGGCATGACAATG+GGG - Chr1:6166456-6166475 None:intergenic 50.0%
!! TAAGGTTGGTTTGGTGGCTG+GGG - Chr1:6172613-6172632 None:intergenic 50.0%
!! TGGGTTTTCCCCGTTTTGAC+TGG + Chr1:6165982-6166001 MsG0180000445.01.T01:intron 50.0%
!! TGTAAGGTTGGTTTGGTGGC+TGG - Chr1:6172615-6172634 None:intergenic 50.0%
!! TTTTAGGAGCTGGAGAGTCG+GGG + Chr1:6170225-6170244 MsG0180000445.01.T01:intron 50.0%
!!! GCCTGAGCTTTTGGGATAGT+TGG + Chr1:6169866-6169885 MsG0180000445.01.T01:intron 50.0%
!!! GGGTTTTCCCCGTTTTGACT+GGG + Chr1:6165983-6166002 MsG0180000445.01.T01:intron 50.0%
!!! TCCCCGTTTTGACTGGGTTT+GGG + Chr1:6165989-6166008 MsG0180000445.01.T01:intron 50.0%
!!! TTCCCCGTTTTGACTGGGTT+TGG + Chr1:6165988-6166007 MsG0180000445.01.T01:intron 50.0%
AACCACATCCCTGTCCTCGA+CGG - Chr1:6166338-6166357 None:intergenic 55.0%
ACCAGCTGAGCTATGCTCAC+GGG + Chr1:6166735-6166754 MsG0180000445.01.T01:intron 55.0%
ACGAGAACAACACAGGACCG+GGG + Chr1:6164414-6164433 MsG0180000445.01.T01:CDS 55.0%
ACGGATTTGGGTGTGGGTTC+GGG - Chr1:6166072-6166091 None:intergenic 55.0%
AGGCCCCCTTAGTGTACTGA+GGG + Chr1:6168747-6168766 MsG0180000445.01.T01:intron 55.0%
AGTTGGTTGGGTCTTTGGGC+CGG + Chr1:6168786-6168805 MsG0180000445.01.T01:intron 55.0%
CATCTCCGTTGGGTATGGGT+AGG + Chr1:6166366-6166385 MsG0180000445.01.T01:intron 55.0%
CCATTGGACCACCTGCTTTC+GGG + Chr1:6169511-6169530 MsG0180000445.01.T01:intron 55.0%
CGCCTGGATATCGGAGAAGA+TGG + Chr1:6164505-6164524 MsG0180000445.01.T01:CDS 55.0%
GACCCAACCAACTAATCCGG+GGG - Chr1:6168779-6168798 None:intergenic 55.0%
GACGAGAACAACACAGGACC+GGG + Chr1:6164413-6164432 MsG0180000445.01.T01:CDS 55.0%
GCAGGTGGTCCAATGGATCT+TGG - Chr1:6169507-6169526 None:intergenic 55.0%
GCATGGGACTGAATGCTAGG+TGG + Chr1:6171462-6171481 MsG0180000445.01.T01:intron 55.0%
GGACGAGAACAACACAGGAC+CGG + Chr1:6164412-6164431 MsG0180000445.01.T01:CDS 55.0%
GGCAAAGCACGGACAAGAAC+TGG + Chr1:6164391-6164410 MsG0180000445.01.T01:CDS 55.0%
GGTTAGGCATGACAATGGGG+TGG - Chr1:6166453-6166472 None:intergenic 55.0%
GTAGGAAGGACAAGGCACGT+CGG + Chr1:6172462-6172481 MsG0180000445.01.T01:intron 55.0%
GTGAGCATAGCTCAGCTGGT+AGG - Chr1:6166735-6166754 None:intergenic 55.0%
GTGGCCAGAGAAATGAGAGG+AGG + Chr1:6172968-6172987 MsG0180000445.01.T01:CDS 55.0%
TAGGCCCCCTTAGTGTACTG+AGG + Chr1:6168746-6168765 MsG0180000445.01.T01:intron 55.0%
TCAATGCATGGACGGGGATG+AGG + Chr1:6166297-6166316 MsG0180000445.01.T01:intron 55.0%
TCGGTGGCCAGAGAAATGAG+AGG + Chr1:6172965-6172984 MsG0180000445.01.T01:CDS 55.0%
! ATTCGGGACGGATTTGGGTG+TGG - Chr1:6166079-6166098 None:intergenic 55.0%
! CCAGGCGACGCGTTTTTCTT+CGG - Chr1:6164492-6164511 None:intergenic 55.0%
! GACGGATTTGGGTGTGGGTT+CGG - Chr1:6166073-6166092 None:intergenic 55.0%
! GTGCAAAGCACTAACGCGGA+TGG + Chr1:6164868-6164887 MsG0180000445.01.T01:intron 55.0%
! GTGGAGAAGTGGGGTGTCTA+GGG + Chr1:6166673-6166692 MsG0180000445.01.T01:intron 55.0%
! TGTGGAGAAGTGGGGTGTCT+AGG + Chr1:6166672-6166691 MsG0180000445.01.T01:intron 55.0%
! TTCGGGACGGATTTGGGTGT+GGG - Chr1:6166078-6166097 None:intergenic 55.0%
!! AGAGCGCCGAAAGGTGATTC+TGG - Chr1:6167981-6168000 None:intergenic 55.0%
!! GATTGGTCCCCCGGATTAGT+TGG + Chr1:6168769-6168788 MsG0180000445.01.T01:intron 55.0%
!! GGGACTAGCTTGCAAGGTGA+GGG - Chr1:6169637-6169656 None:intergenic 55.0%
!! GGGTGGGTTAGGCATGACAA+TGG - Chr1:6166458-6166477 None:intergenic 55.0%
!! GTCCCCCGGATTAGTTGGTT+GGG + Chr1:6168774-6168793 MsG0180000445.01.T01:intron 55.0%
!! TGGGACTAGCTTGCAAGGTG+AGG - Chr1:6169638-6169657 None:intergenic 55.0%
!! TTGGTTCGGGCGAGTAACCA+CGG - Chr1:6165951-6165970 None:intergenic 55.0%
AACAACACAGGACCGGGGTC+GGG + Chr1:6164419-6164438 MsG0180000445.01.T01:CDS 60.0%
ACAATGGGGTGGGGTGAGGA+CGG - Chr1:6166442-6166461 None:intergenic 60.0%
ACCACATCCCTGTCCTCGAC+GGG - Chr1:6166337-6166356 None:intergenic 60.0%
ACGGGTATGGGACGGGTAAC+AGG + Chr1:6166031-6166050 MsG0180000445.01.T01:intron 60.0%
AGGGGTTTCTTAGGAGGCGG+CGG + Chr1:6164608-6164627 MsG0180000445.01.T01:intron 60.0%
ATGCATGGACGGGGATGAGG+CGG + Chr1:6166300-6166319 MsG0180000445.01.T01:intron 60.0%
ATTTGGGTGTGGGTTCGGGG+TGG - Chr1:6166068-6166087 None:intergenic 60.0%
CATGACAATGGGGTGGGGTG+AGG - Chr1:6166446-6166465 None:intergenic 60.0%
CCAGCTGAGCTATGCTCACG+GGG + Chr1:6166736-6166755 MsG0180000445.01.T01:intron 60.0%
CCCGAAAGCAGGTGGTCCAA+TGG - Chr1:6169514-6169533 None:intergenic 60.0%
CCGAAGAAAAACGCGTCGCC+TGG + Chr1:6164489-6164508 MsG0180000445.01.T01:CDS 60.0%
CGGATTTGGGTGTGGGTTCG+GGG - Chr1:6166071-6166090 None:intergenic 60.0%
GAACAACACAGGACCGGGGT+CGG + Chr1:6164418-6164437 MsG0180000445.01.T01:CDS 60.0%
GGGCGAGTAACCACGGGTAT+GGG - Chr1:6165944-6165963 None:intergenic 60.0%
TGTTCGTGTTGTCCCGACCC+CGG - Chr1:6164434-6164453 None:intergenic 60.0%
TTTGGGTGTGGGTTCGGGGT+GGG - Chr1:6166067-6166086 None:intergenic 60.0%
! ATCCCTGTCCTCGACGGGTT+CGG - Chr1:6166332-6166351 None:intergenic 60.0%
! GGAGAAGATGGTGGTGCGGA+GGG + Chr1:6164517-6164536 MsG0180000445.01.T01:CDS 60.0%
! TGGTTCGGGCGAGTAACCAC+GGG - Chr1:6165950-6165969 None:intergenic 60.0%
!! CGGGTTGGGACTAGCTTGCA+AGG - Chr1:6169643-6169662 None:intergenic 60.0%
!! GGTCCCCCGGATTAGTTGGT+TGG + Chr1:6168773-6168792 MsG0180000445.01.T01:intron 60.0%
!! GTACTGAGGGATTGGTCCCC+CGG + Chr1:6168760-6168779 MsG0180000445.01.T01:intron 60.0%
ACCCGAACCCGTCGAGGACA+GGG + Chr1:6166327-6166346 MsG0180000445.01.T01:intron 65.0%
ACCCGTCGAGGACAGGGATG+TGG + Chr1:6166333-6166352 MsG0180000445.01.T01:intron 65.0%
CCCCGTGAGCATAGCTCAGC+TGG - Chr1:6166739-6166758 None:intergenic 65.0%
CGGGCGAGTAACCACGGGTA+TGG - Chr1:6165945-6165964 None:intergenic 65.0%
GTTACCGGTGGTGCGACGAG+CGG - Chr1:6164549-6164568 None:intergenic 65.0%
TACCCGAACCCGTCGAGGAC+AGG + Chr1:6166326-6166345 MsG0180000445.01.T01:intron 65.0%
TGCATGGACGGGGATGAGGC+GGG + Chr1:6166301-6166320 MsG0180000445.01.T01:intron 65.0%
! CGGAGAAGATGGTGGTGCGG+AGG + Chr1:6164516-6164535 MsG0180000445.01.T01:CDS 65.0%
! TCCCTGTCCTCGACGGGTTC+GGG - Chr1:6166331-6166350 None:intergenic 65.0%
!! GGTTGGTTTGGTGGCTGGGG+TGG - Chr1:6172610-6172629 None:intergenic 65.0%
GCATGGACGGGGATGAGGCG+GGG + Chr1:6166302-6166321 MsG0180000445.01.T01:intron 70.0%
GGGGATACCCGAACCCGTCG+AGG + Chr1:6166321-6166340 MsG0180000445.01.T01:intron 70.0%
GACGCCGCTCGTCGCACCAC+CGG + Chr1:6164542-6164561 MsG0180000445.01.T01:CDS 75.0%
GGTGGTGCGACGAGCGGCGT+CGG - Chr1:6164543-6164562 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 6164389 6173083 6164389 ID=MsG0180000445.01;Name=MsG0180000445.01
Chr1 mRNA 6164389 6173083 6164389 ID=MsG0180000445.01.T01;Parent=MsG0180000445.01;Name=MsG0180000445.01.T01;_AED=0.59;_eAED=0.61;_QI=0|0.75|0.55|0.88|1|1|9|0|301
Chr1 exon 6164389 6164563 6164389 ID=MsG0180000445.01.T01:exon:27986;Parent=MsG0180000445.01.T01
Chr1 exon 6169130 6169219 6169130 ID=MsG0180000445.01.T01:exon:27985;Parent=MsG0180000445.01.T01
Chr1 exon 6170231 6170268 6170231 ID=MsG0180000445.01.T01:exon:27984;Parent=MsG0180000445.01.T01
Chr1 exon 6170350 6170439 6170350 ID=MsG0180000445.01.T01:exon:27983;Parent=MsG0180000445.01.T01
Chr1 exon 6170601 6170678 6170601 ID=MsG0180000445.01.T01:exon:27982;Parent=MsG0180000445.01.T01
Chr1 exon 6170851 6170958 6170851 ID=MsG0180000445.01.T01:exon:27981;Parent=MsG0180000445.01.T01
Chr1 exon 6171075 6171176 6171075 ID=MsG0180000445.01.T01:exon:27980;Parent=MsG0180000445.01.T01
Chr1 exon 6171693 6171748 6171693 ID=MsG0180000445.01.T01:exon:27979;Parent=MsG0180000445.01.T01
Chr1 exon 6172915 6173083 6172915 ID=MsG0180000445.01.T01:exon:27978;Parent=MsG0180000445.01.T01
Chr1 CDS 6164389 6164563 6164389 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6169130 6169219 6169130 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6170231 6170268 6170231 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6170350 6170439 6170350 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6170601 6170678 6170601 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6170851 6170958 6170851 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6171075 6171176 6171075 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6171693 6171748 6171693 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Chr1 CDS 6172915 6173083 6172915 ID=MsG0180000445.01.T01:cds;Parent=MsG0180000445.01.T01
Gene Sequence

>MsG0180000445.01.T01

ATGGCAAAGCACGGACAAGAACTGGACGAGAACAACACAGGACCGGGGTCGGGACAACACGAACAAGAAAACAGAACTCCGACAGAAGAAAATCGCGTCACCGAAGAAAAACGCGTCGCCTGGATATCGGAGAAGATGGTGGTGCGGAGGGCCGACGCCGCTCGTCGCACCACCGGTTACATGCATTTACAGACTGCAGAAATTGAAAGAAGAATAGAGTTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTAGGAGCTGGAGAGTCGGGGAAGTCCACTATATTTAAGCAGATAAAACTTTTATTTCAAACTGGCTTTGATGAGGCAGAGCTAAAAAGCTACCTACCAGTCATTCATGCTAATGTCTATCAGACAATAAAATTACTTCATGATGGATCGAAAGAGTTTGCCCAGAATGATGTTGATTTTTCGAAGTATGTTATATCCAGTGAAAATAAGGACATTGGCGAAAAGTTATCAGAAATTGGAGGCAGGCTTGATTACCCCCGTCTCACTAAGGAACTTGCACAAGAAATAGAGAGTCTGTGGAAGGATGCTGCAATTCAGGAAACATATGCCCGTGGTAATGAGCTCCAAGTTCCAGATTGTACCCATTATTTCATGGAAAATTTGCAGAGGCTGTCGGATGCTAATTATGTTCCAACAAAGGAGGATGTGTTGCTTGCAAGAGTTCGTACCACTGGTGTTGTAGAGATTCAGTTCAGCCCTGTTGGAGAAAACAAGAAAAGTGGTGAAGTCTATAGACTGTTTGATGTCGGTGGCCAGAGAAATGAGAGGAGGAAATGGATCCATCTGTTTGAAGGAGTTTCAGCTGTAATATTCTGTGTTGCGATTAGCGAGTATGGTCTACCATTTGACTCTATTTTAATATGA
Protein sequence

>MsG0180000445.01.T01

MAKHGQELDENNTGPGSGQHEQENRTPTEENRVTEEKRVAWISEKMVVRRADAARRTTGYMHLQTAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYLPVIHANVYQTIKLLHDGSKEFAQNDVDFSKYVISSENKDIGEKLSEIGGRLDYPRLTKELAQEIESLWKDAAIQETYARGNELQVPDCTHYFMENLQRLSDANYVPTKEDVLLARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCVAISEYGLPFDSILI*