Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010001.01.T01 | XP_003596322.1 | 97.895 | 475 | 10 | 0 | 1 | 475 | 1 | 475 | 0 | 962 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010001.01.T01 | F4KGE8 | 28.606 | 416 | 247 | 9 | 73 | 456 | 161 | 558 | 5.28E-45 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010001.01.T01 | G7ITF5 | 97.895 | 475 | 10 | 0 | 1 | 475 | 1 | 475 | 0.0 | 962 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0280010001.01 | 0.836781 | 7.651690e-57 | 9.743279e-54 |
| MsG0080048058.01 | MsG0280010001.01 | 0.808891 | 2.478716e-50 | 1.434106e-47 |
| MsG0080048700.01 | MsG0280010001.01 | 0.842683 | 2.226608e-58 | 3.401785e-55 |
| MsG0180000001.01 | MsG0280010001.01 | 0.823192 | 1.580815e-53 | 1.351734e-50 |
| MsG0180000295.01 | MsG0280010001.01 | 0.805323 | 1.411293e-49 | 7.444327e-47 |
| MsG0180000300.01 | MsG0280010001.01 | 0.810522 | 1.105638e-50 | 6.679357e-48 |
| MsG0180000324.01 | MsG0280010001.01 | 0.802485 | 5.487154e-49 | 2.691054e-46 |
| MsG0180000360.01 | MsG0280010001.01 | 0.867530 | 1.278372e-65 | 4.477887e-62 |
| MsG0180000364.01 | MsG0280010001.01 | 0.810250 | 1.265301e-50 | 7.589572e-48 |
| MsG0180000445.01 | MsG0280010001.01 | 0.802905 | 4.493604e-49 | 2.227582e-46 |
| MsG0180000446.01 | MsG0280010001.01 | 0.803637 | 3.170205e-49 | 1.601269e-46 |
| MsG0180001117.01 | MsG0280010001.01 | 0.839172 | 1.857284e-57 | 2.543799e-54 |
| MsG0180001173.01 | MsG0280010001.01 | 0.832818 | 7.610449e-56 | 8.602929e-53 |
| MsG0180001237.01 | MsG0280010001.01 | 0.832469 | 9.289000e-56 | 1.039173e-52 |
| MsG0180001294.01 | MsG0280010001.01 | 0.814225 | 1.716797e-51 | 1.145312e-48 |
| MsG0180001565.01 | MsG0280010001.01 | 0.863078 | 3.216994e-64 | 9.631692e-61 |
| MsG0180001566.01 | MsG0280010001.01 | 0.848667 | 5.297359e-60 | 9.793860e-57 |
| MsG0180002074.01 | MsG0280010001.01 | 0.815746 | 7.893869e-52 | 5.488978e-49 |
| MsG0180003820.01 | MsG0280010001.01 | 0.823463 | 1.366422e-53 | 1.177334e-50 |
| MsG0180003858.01 | MsG0280010001.01 | 0.818222 | 2.194367e-52 | 1.632730e-49 |
| MsG0180004357.01 | MsG0280010001.01 | 0.817583 | 3.058790e-52 | 2.236415e-49 |
| MsG0180004754.01 | MsG0280010001.01 | 0.831662 | 1.469709e-55 | 1.605608e-52 |
| MsG0180004989.01 | MsG0280010001.01 | 0.843305 | 1.520991e-58 | 2.369950e-55 |
| MsG0180004991.01 | MsG0280010001.01 | 0.820970 | 5.175252e-53 | 4.156348e-50 |
| MsG0180005188.01 | MsG0280010001.01 | 0.839060 | 1.986365e-57 | 2.711411e-54 |
| MsG0180005443.01 | MsG0280010001.01 | 0.845298 | 4.430347e-59 | 7.350296e-56 |
| MsG0180005451.01 | MsG0280010001.01 | 0.843398 | 1.435652e-58 | 2.243669e-55 |
| MsG0180005493.01 | MsG0280010001.01 | 0.807208 | 5.654882e-50 | 3.130951e-47 |
| MsG0180005504.01 | MsG0280010001.01 | 0.829604 | 4.690883e-55 | 4.824407e-52 |
| MsG0180005921.01 | MsG0280010001.01 | 0.826100 | 3.264630e-54 | 3.032303e-51 |
| MsG0180006023.01 | MsG0280010001.01 | 0.822184 | 2.712605e-53 | 2.253939e-50 |
| MsG0180006235.01 | MsG0280010001.01 | 0.836747 | 7.806031e-57 | 9.929282e-54 |
| MsG0180006260.01 | MsG0280010001.01 | 0.881463 | 2.350938e-70 | 1.378820e-66 |
| MsG0280006692.01 | MsG0280010001.01 | 0.813251 | 2.814170e-51 | 1.828316e-48 |
| MsG0280007089.01 | MsG0280010001.01 | 0.805435 | 1.336574e-49 | 7.070740e-47 |
| MsG0280007609.01 | MsG0280010001.01 | 0.811989 | 5.312274e-51 | 3.336795e-48 |
| MsG0280007764.01 | MsG0280010001.01 | 0.811519 | 6.721416e-51 | 4.169658e-48 |
| MsG0280007790.01 | MsG0280010001.01 | 0.828775 | 7.454535e-55 | 7.481900e-52 |
| MsG0280008614.01 | MsG0280010001.01 | 0.850999 | 1.180460e-60 | 2.355485e-57 |
| MsG0280009241.01 | MsG0280010001.01 | 0.802576 | 5.254092e-49 | 2.582720e-46 |
| MsG0280009509.01 | MsG0280010001.01 | 0.841834 | 3.735708e-58 | 5.557327e-55 |
| MsG0280009514.01 | MsG0280010001.01 | 0.834915 | 2.273607e-56 | 2.737043e-53 |
| MsG0280009515.01 | MsG0280010001.01 | 0.832291 | 1.028134e-55 | 1.143994e-52 |
| MsG0280010001.01 | MsG0280010632.01 | 0.824220 | 9.082533e-54 | 7.994826e-51 |
| MsG0280010001.01 | MsG0280010735.01 | 0.809119 | 2.214574e-50 | 1.289268e-47 |
| MsG0280010001.01 | MsG0280010857.01 | 0.805785 | 1.128875e-49 | 6.025992e-47 |
| MsG0280010001.01 | MsG0280010868.01 | 0.803517 | 3.356666e-49 | 1.690293e-46 |
| MsG0280010001.01 | MsG0280010977.01 | 0.813002 | 3.191216e-51 | 2.059460e-48 |
| MsG0280010001.01 | MsG0280011293.01 | 0.803768 | 2.977868e-49 | 1.509200e-46 |
| MsG0280010001.01 | MsG0380011536.01 | 0.803911 | 2.780119e-49 | 1.414277e-46 |
| MsG0280010001.01 | MsG0380013548.01 | 0.831176 | 1.936392e-55 | 2.084963e-52 |
| MsG0280010001.01 | MsG0380015495.01 | 0.800240 | 1.581347e-48 | 7.326148e-46 |
| MsG0280010001.01 | MsG0380015548.01 | 0.832749 | 7.915103e-56 | 8.929212e-53 |
| MsG0280010001.01 | MsG0380015702.01 | 0.806415 | 8.317232e-50 | 4.511657e-47 |
| MsG0280010001.01 | MsG0380015831.01 | 0.838258 | 3.200334e-57 | 4.262545e-54 |
| MsG0280010001.01 | MsG0380016140.01 | 0.822053 | 2.910057e-53 | 2.408948e-50 |
| MsG0280010001.01 | MsG0380016227.01 | 0.800323 | 1.520928e-48 | 7.061469e-46 |
| MsG0280010001.01 | MsG0380016510.01 | 0.835835 | 1.331222e-56 | 1.647389e-53 |
| MsG0280010001.01 | MsG0380016703.01 | 0.816494 | 5.372197e-52 | 3.812275e-49 |
| MsG0280010001.01 | MsG0380016882.01 | 0.800992 | 1.110964e-48 | 5.246613e-46 |
| MsG0280010001.01 | MsG0380016994.01 | 0.852922 | 3.358481e-61 | 7.130194e-58 |
| MsG0280010001.01 | MsG0380017091.01 | 0.814890 | 1.223595e-51 | 8.310476e-49 |
| MsG0280010001.01 | MsG0380017159.01 | 0.830620 | 2.650885e-55 | 2.807796e-52 |
| MsG0280010001.01 | MsG0380017240.01 | 0.878352 | 3.009486e-69 | 1.566455e-65 |
| MsG0280010001.01 | MsG0380017375.01 | 0.806368 | 8.510123e-50 | 4.610749e-47 |
| MsG0280010001.01 | MsG0380017643.01 | 0.806138 | 9.513800e-50 | 5.124596e-47 |
| MsG0280010001.01 | MsG0380017836.01 | 0.867382 | 1.425710e-65 | 4.968561e-62 |
| MsG0280010001.01 | MsG0380018015.01 | 0.805200 | 1.497393e-49 | 7.873768e-47 |
| MsG0280010001.01 | MsG0480018230.01 | 0.826685 | 2.368544e-54 | 2.236957e-51 |
| MsG0280010001.01 | MsG0480018256.01 | 0.820009 | 8.599614e-53 | 6.724292e-50 |
| MsG0280010001.01 | MsG0480018845.01 | 0.849953 | 2.322630e-60 | 4.478039e-57 |
| MsG0280010001.01 | MsG0480018846.01 | 0.865421 | 5.976504e-65 | 1.943169e-61 |
| MsG0280010001.01 | MsG0480019034.01 | 0.812102 | 5.020066e-51 | 3.162979e-48 |
| MsG0280010001.01 | MsG0480020242.01 | 0.827485 | 1.524079e-54 | 1.473412e-51 |
| MsG0280010001.01 | MsG0480020917.01 | 0.810911 | 9.108583e-51 | 5.560578e-48 |
| MsG0280010001.01 | MsG0480021156.01 | 0.866447 | 2.831913e-65 | 9.547724e-62 |
| MsG0280010001.01 | MsG0480021158.01 | 0.838527 | 2.727366e-57 | 3.662944e-54 |
| MsG0280010001.01 | MsG0480021225.01 | 0.837652 | 4.581923e-57 | 5.991839e-54 |
| MsG0280010001.01 | MsG0480022094.01 | 0.828911 | 6.910695e-55 | 6.963524e-52 |
| MsG0280010001.01 | MsG0480022228.01 | 0.866331 | 3.083561e-65 | 1.035414e-61 |
| MsG0280010001.01 | MsG0480022325.01 | 0.857417 | 1.655860e-62 | 4.083629e-59 |
| MsG0280010001.01 | MsG0480022331.01 | 0.800842 | 1.192107e-48 | 5.608092e-46 |
| MsG0280010001.01 | MsG0480022719.01 | 0.812465 | 4.182080e-51 | 2.661143e-48 |
| MsG0280010001.01 | MsG0480023053.01 | 0.870383 | 1.521690e-66 | 5.907166e-63 |
| MsG0280010001.01 | MsG0480023421.01 | 0.832036 | 1.188524e-55 | 1.312819e-52 |
| MsG0280010001.01 | MsG0480023463.01 | 0.800195 | 1.614820e-48 | 7.472697e-46 |
| MsG0280010001.01 | MsG0480023500.01 | 0.857185 | 1.938677e-62 | 4.744299e-59 |
| MsG0280010001.01 | MsG0480023620.01 | 0.915834 | 3.674602e-85 | 9.799142e-81 |
| MsG0280010001.01 | MsG0480023874.01 | 0.826620 | 2.455264e-54 | 2.314514e-51 |
| MsG0280010001.01 | MsG0480024010.01 | 0.802493 | 5.466556e-49 | 2.681442e-46 |
| MsG0280010001.01 | MsG0580024109.01 | 0.819789 | 9.656479e-53 | 7.504438e-50 |
| MsG0280010001.01 | MsG0580024157.01 | 0.847707 | 9.753067e-60 | 1.748565e-56 |
| MsG0280010001.01 | MsG0580024489.01 | 0.809375 | 1.952352e-50 | 1.144382e-47 |
| MsG0280010001.01 | MsG0580024618.01 | 0.813053 | 3.109092e-51 | 2.009175e-48 |
| MsG0280010001.01 | MsG0580024721.01 | 0.812115 | 4.986843e-51 | 3.143116e-48 |
| MsG0280010001.01 | MsG0580024743.01 | 0.805760 | 1.142530e-49 | 6.095258e-47 |
| MsG0280010001.01 | MsG0580025072.01 | 0.806739 | 7.105392e-50 | 3.886556e-47 |
| MsG0280010001.01 | MsG0580025352.01 | 0.870811 | 1.100657e-66 | 4.339507e-63 |
| MsG0280010001.01 | MsG0580026059.01 | 0.811558 | 6.594120e-51 | 4.094740e-48 |
| MsG0280010001.01 | MsG0580026593.01 | 0.804905 | 1.726166e-49 | 9.008854e-47 |
| MsG0280010001.01 | MsG0580027208.01 | 0.834208 | 3.423126e-56 | 4.034093e-53 |
| MsG0280010001.01 | MsG0580027938.01 | 0.824764 | 6.764210e-54 | 6.048543e-51 |
| MsG0280010001.01 | MsG0580028060.01 | 0.871386 | 7.111877e-67 | 2.863552e-63 |
| MsG0280010001.01 | MsG0580028228.01 | 0.827154 | 1.830132e-54 | 1.752192e-51 |
| MsG0280010001.01 | MsG0580029371.01 | 0.805724 | 1.162368e-49 | 6.195419e-47 |
| MsG0280010001.01 | MsG0580029563.01 | 0.800299 | 1.538522e-48 | 7.138809e-46 |
| MsG0280010001.01 | MsG0580029640.01 | 0.800350 | 1.502084e-48 | 6.978612e-46 |
| MsG0280010001.01 | MsG0680030436.01 | 0.812538 | 4.031119e-51 | 2.569954e-48 |
| MsG0280010001.01 | MsG0680030679.01 | 0.804564 | 2.033195e-49 | 1.051719e-46 |
| MsG0280010001.01 | MsG0680030740.01 | 0.848167 | 7.283792e-60 | 1.324907e-56 |
| MsG0280010001.01 | MsG0680030865.01 | 0.816551 | 5.217176e-52 | 3.708085e-49 |
| MsG0280010001.01 | MsG0680031877.01 | 0.807637 | 4.586168e-50 | 2.567627e-47 |
| MsG0280010001.01 | MsG0680033793.01 | 0.816848 | 4.475264e-52 | 3.206886e-49 |
| MsG0280010001.01 | MsG0780036235.01 | 0.800962 | 1.126655e-48 | 5.316539e-46 |
| MsG0280010001.01 | MsG0780036752.01 | 0.852119 | 5.689228e-61 | 1.176807e-57 |
| MsG0280010001.01 | MsG0780036773.01 | 0.803954 | 2.724659e-49 | 1.387539e-46 |
| MsG0280010001.01 | MsG0780036816.01 | 0.815519 | 8.870086e-52 | 6.129300e-49 |
| MsG0280010001.01 | MsG0780037821.01 | 0.817420 | 3.328738e-52 | 2.423047e-49 |
| MsG0280010001.01 | MsG0780038603.01 | 0.803876 | 2.827539e-49 | 1.437082e-46 |
| MsG0280010001.01 | MsG0780038837.01 | 0.834550 | 2.808988e-56 | 3.344871e-53 |
| MsG0280010001.01 | MsG0780039654.01 | 0.832146 | 1.116386e-55 | 1.236979e-52 |
| MsG0280010001.01 | MsG0780039655.01 | 0.825861 | 3.719971e-54 | 3.432122e-51 |
| MsG0280010001.01 | MsG0780039712.01 | 0.844698 | 6.434372e-59 | 1.047294e-55 |
| MsG0280010001.01 | MsG0780039817.01 | 0.837730 | 4.374344e-57 | 5.734136e-54 |
| MsG0280010001.01 | MsG0780040079.01 | 0.815709 | 8.045827e-52 | 5.588828e-49 |
| MsG0280010001.01 | MsG0780040290.01 | 0.812551 | 4.005641e-51 | 2.554511e-48 |
| MsG0280010001.01 | MsG0780040488.01 | 0.835979 | 1.223723e-56 | 1.520987e-53 |
| MsG0280010001.01 | MsG0780040541.01 | 0.846374 | 2.260631e-59 | 3.883025e-56 |
| MsG0280010001.01 | MsG0780040564.01 | 0.853252 | 2.701144e-61 | 5.800247e-58 |
| MsG0280010001.01 | MsG0780040586.01 | 0.861692 | 8.583961e-64 | 2.449098e-60 |
| MsG0280010001.01 | MsG0780040688.01 | 0.816338 | 5.822449e-52 | 4.114633e-49 |
| MsG0280010001.01 | MsG0780040856.01 | 0.814597 | 1.420464e-51 | 9.572366e-49 |
| MsG0280010001.01 | MsG0780040880.01 | 0.810762 | 9.811823e-51 | 5.965974e-48 |
| MsG0280010001.01 | MsG0780041305.01 | 0.802805 | 4.712765e-49 | 2.330355e-46 |
| MsG0280010001.01 | MsG0780041423.01 | 0.829666 | 4.531501e-55 | 4.669015e-52 |
| MsG0280010001.01 | MsG0780041469.01 | 0.812864 | 3.421199e-51 | 2.199649e-48 |
| MsG0280010001.01 | MsG0880042547.01 | 0.801088 | 1.061803e-48 | 5.026566e-46 |
| MsG0280010001.01 | MsG0880042552.01 | 0.802524 | 5.385466e-49 | 2.643760e-46 |
| MsG0280010001.01 | MsG0880042760.01 | 0.824023 | 1.010527e-53 | 8.845237e-51 |
| MsG0280010001.01 | MsG0880042829.01 | 0.819538 | 1.102170e-52 | 8.505539e-50 |
| MsG0280010001.01 | MsG0880042836.01 | 0.849244 | 3.663072e-60 | 6.902024e-57 |
| MsG0280010001.01 | MsG0880042845.01 | 0.831956 | 1.243912e-55 | 1.370842e-52 |
| MsG0280010001.01 | MsG0880042929.01 | 0.800045 | 1.732211e-48 | 7.985616e-46 |
| MsG0280010001.01 | MsG0880043297.01 | 0.812493 | 4.124663e-51 | 2.626389e-48 |
| MsG0280010001.01 | MsG0880043516.01 | 0.801550 | 8.539279e-49 | 4.089537e-46 |
| MsG0280010001.01 | MsG0880044565.01 | 0.807513 | 4.871572e-50 | 2.718808e-47 |
| MsG0280010001.01 | MsG0880044803.01 | 0.832517 | 9.035459e-56 | 1.012286e-52 |
| MsG0280010001.01 | MsG0880044878.01 | 0.823047 | 1.709548e-53 | 1.455908e-50 |
| MsG0280010001.01 | MsG0880045393.01 | 0.817746 | 2.810270e-52 | 2.064019e-49 |
| MsG0280010001.01 | MsG0880045433.01 | -0.811320 | 7.427740e-51 | 4.583283e-48 |
| MsG0280010001.01 | MsG0880045506.01 | 0.815721 | 7.996992e-52 | 5.556740e-49 |
| MsG0280010001.01 | MsG0880045838.01 | 0.837579 | 4.782911e-57 | 6.240113e-54 |
| MsG0280010001.01 | MsG0880046027.01 | 0.811024 | 8.610677e-51 | 5.272536e-48 |
| MsG0280010001.01 | MsG0880046086.01 | 0.826713 | 2.332760e-54 | 2.204830e-51 |
| MsG0280010001.01 | MsG0880046165.01 | 0.819666 | 1.030239e-52 | 7.978591e-50 |
| MsG0280010001.01 | MsG0880046762.01 | 0.844301 | 8.230225e-59 | 1.322961e-55 |
| MsG0280010001.01 | MsG0880046983.01 | 0.802128 | 6.497071e-49 | 3.157550e-46 |
| MsG0280010001.01 | MsG0880047044.01 | 0.814579 | 1.434207e-51 | 9.659941e-49 |
| MsG0280010001.01 | MsG0880047192.01 | 0.811916 | 5.510374e-51 | 3.454228e-48 |
| MsG0280010001.01 | MsG0880047226.01 | 0.862684 | 4.256916e-64 | 1.257351e-60 |
| MsG0280010001.01 | MsG0880047293.01 | 0.852362 | 4.852264e-61 | 1.011441e-57 |
| MsG0280010001.01 | MsG0880047337.01 | 0.807371 | 5.223209e-50 | 2.904105e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480023105.01 | MsG0280010001.01 | PPI |
| MsG0480023105.01 | MsG0280010001.01 | PPI |
| MsG0480023105.01 | MsG0280010001.01 | PPI |
| MsG0480019205.01 | MsG0280010001.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010001.01.T01 | MTR_2g075910 | 97.895 | 475 | 10 | 0 | 1 | 475 | 1 | 475 | 0.0 | 962 |
| MsG0280010001.01.T01 | MTR_8g059485 | 59.870 | 461 | 156 | 10 | 1 | 455 | 1 | 438 | 3.41e-180 | 512 |
| MsG0280010001.01.T01 | MTR_8g059485 | 59.870 | 461 | 156 | 10 | 1 | 455 | 10 | 447 | 1.02e-179 | 511 |
| MsG0280010001.01.T01 | MTR_8g087400 | 45.356 | 463 | 238 | 7 | 1 | 453 | 1 | 458 | 3.91e-127 | 377 |
| MsG0280010001.01.T01 | MTR_4g025420 | 41.282 | 390 | 211 | 5 | 71 | 453 | 34 | 412 | 1.21e-98 | 303 |
| MsG0280010001.01.T01 | MTR_0178s0030 | 31.486 | 397 | 247 | 5 | 69 | 453 | 139 | 522 | 1.18e-57 | 199 |
| MsG0280010001.01.T01 | MTR_5g075180 | 31.738 | 397 | 233 | 8 | 64 | 455 | 78 | 441 | 2.67e-51 | 181 |
| MsG0280010001.01.T01 | MTR_3g462150 | 30.446 | 404 | 248 | 10 | 73 | 457 | 92 | 481 | 9.46e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010001.01.T01 | AT1G53380 | 52.288 | 459 | 204 | 7 | 1 | 453 | 1 | 450 | 1.77e-167 | 480 |
| MsG0280010001.01.T01 | AT1G53380 | 52.288 | 459 | 204 | 7 | 1 | 453 | 1 | 450 | 1.77e-167 | 480 |
| MsG0280010001.01.T01 | AT1G53380 | 52.288 | 459 | 204 | 7 | 1 | 453 | 1 | 450 | 1.77e-167 | 480 |
| MsG0280010001.01.T01 | AT1G53380 | 52.288 | 459 | 204 | 7 | 1 | 453 | 1 | 450 | 1.77e-167 | 480 |
| MsG0280010001.01.T01 | AT1G53380 | 52.288 | 459 | 204 | 7 | 1 | 453 | 1 | 450 | 1.77e-167 | 480 |
| MsG0280010001.01.T01 | AT3G14870 | 50.318 | 471 | 216 | 5 | 1 | 458 | 5 | 470 | 8.35e-165 | 474 |
| MsG0280010001.01.T01 | AT3G14870 | 50.318 | 471 | 216 | 5 | 1 | 458 | 2 | 467 | 9.07e-165 | 474 |
| MsG0280010001.01.T01 | AT3G14870 | 50.318 | 471 | 216 | 5 | 1 | 458 | 1 | 466 | 1.28e-164 | 473 |
| MsG0280010001.01.T01 | AT3G14870 | 50.318 | 471 | 216 | 5 | 1 | 458 | 1 | 466 | 1.28e-164 | 473 |
| MsG0280010001.01.T01 | AT3G14870 | 50.318 | 471 | 216 | 5 | 1 | 458 | 1 | 466 | 1.28e-164 | 473 |
| MsG0280010001.01.T01 | AT1G29300 | 41.841 | 478 | 234 | 9 | 1 | 457 | 1 | 455 | 5.33e-111 | 336 |
| MsG0280010001.01.T01 | AT2G45260 | 40.351 | 399 | 225 | 3 | 62 | 453 | 26 | 418 | 4.07e-102 | 312 |
| MsG0280010001.01.T01 | AT3G60680 | 31.714 | 391 | 251 | 4 | 74 | 459 | 120 | 499 | 1.17e-59 | 204 |
| MsG0280010001.01.T01 | AT4G34080 | 36.786 | 280 | 170 | 2 | 62 | 334 | 2 | 281 | 2.71e-56 | 189 |
| MsG0280010001.01.T01 | AT2G30380 | 32.540 | 378 | 212 | 4 | 76 | 453 | 76 | 410 | 6.67e-54 | 186 |
| MsG0280010001.01.T01 | AT4G33320 | 34.965 | 286 | 178 | 3 | 62 | 339 | 2 | 287 | 4.59e-50 | 172 |
| MsG0280010001.01.T01 | AT5G58960 | 28.606 | 416 | 247 | 9 | 73 | 456 | 86 | 483 | 1.96e-46 | 168 |
| MsG0280010001.01.T01 | AT5G58960 | 28.606 | 416 | 247 | 9 | 73 | 456 | 86 | 483 | 1.96e-46 | 168 |
| MsG0280010001.01.T01 | AT5G58960 | 28.606 | 416 | 247 | 9 | 73 | 456 | 161 | 558 | 5.38e-46 | 168 |
| MsG0280010001.01.T01 | AT2G32130 | 45.161 | 124 | 68 | 0 | 73 | 196 | 34 | 157 | 6.95e-27 | 106 |
| MsG0280010001.01.T01 | AT4G36100 | 45.098 | 102 | 53 | 1 | 62 | 160 | 2 | 103 | 2.05e-20 | 90.5 |
Find 52 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATGTTGTTCACTTATC+AGG | 0.152485 | 2:+62653807 | MsG0280010001.01.T01:CDS |
| TCATTTGGAAGATTGAAATT+AGG | 0.213794 | 2:-62654047 | None:intergenic |
| GCTAGCATTTCAACCGTTAA+AGG | 0.254354 | 2:+62653441 | MsG0280010001.01.T01:CDS |
| TCCATGTTTGTTTCATCCTT+TGG | 0.256313 | 2:-62653315 | None:intergenic |
| CTTCTTCGCGGTAATCTCAT+AGG | 0.337313 | 2:-62653658 | None:intergenic |
| CATTTGGAAGATTGAAATTA+GGG | 0.340570 | 2:-62654046 | None:intergenic |
| ATGAAATGAGATCTGCAAAA+TGG | 0.347278 | 2:+62653907 | MsG0280010001.01.T01:CDS |
| TTCAGCATATGCACCTTTAA+CGG | 0.355170 | 2:-62653454 | None:intergenic |
| AGCTGAATCGAAGGAGATAA+AGG | 0.357870 | 2:+62653623 | MsG0280010001.01.T01:CDS |
| TTCCTAGCTAATTTCTTGCT+TGG | 0.381111 | 2:-62653231 | None:intergenic |
| TCATCAGGAAGTGCCTCATT+TGG | 0.398030 | 2:-62654062 | None:intergenic |
| GAAATCTTTCAAGTGGGAAA+AGG | 0.412349 | 2:+62654377 | MsG0280010001.01.T01:CDS |
| GATTAACTCCTGTGTGAAAT+CGG | 0.417828 | 2:-62654608 | None:intergenic |
| TCAGAAGCTTCAATTCCATC+AGG | 0.419938 | 2:-62653504 | None:intergenic |
| TTGCTTGGTGTCACTGCTGA+AGG | 0.427239 | 2:-62653216 | None:intergenic |
| GTTTCTTAAAGAGAAATTAG+TGG | 0.430754 | 2:+62653719 | MsG0280010001.01.T01:CDS |
| TCAGAAGAAGAACCAGTTGT+TGG | 0.431414 | 2:+62654476 | MsG0280010001.01.T01:CDS |
| AATTGCGCAAACGATGATCT+TGG | 0.434932 | 2:-62654167 | None:intergenic |
| GAAACTCTCCACCACTCAAA+AGG | 0.448344 | 2:-62654265 | None:intergenic |
| CGCGAAGAAGTTGGAATCAC+AGG | 0.450315 | 2:+62653671 | MsG0280010001.01.T01:CDS |
| CATCGTTTGCGCAATTCTGC+AGG | 0.469810 | 2:+62654174 | MsG0280010001.01.T01:CDS |
| TGCTCTAAGATGAAGAACTT+TGG | 0.476082 | 2:-62653259 | None:intergenic |
| AGCTTGAACCTCAAAAGAAA+AGG | 0.479323 | 2:-62654354 | None:intergenic |
| AAATCTTTCAAGTGGGAAAA+GGG | 0.495316 | 2:+62654378 | MsG0280010001.01.T01:CDS |
| TCAATTCCATCAGGGTCAAA+AGG | 0.497708 | 2:-62653495 | None:intergenic |
| CTGTGATTCCAACTTCTTCG+CGG | 0.499296 | 2:-62653670 | None:intergenic |
| ATAATGTTGTTCACTTATCA+GGG | 0.499714 | 2:+62653808 | MsG0280010001.01.T01:CDS |
| TAATTTCAATCTTCCAAATG+AGG | 0.502545 | 2:+62654049 | MsG0280010001.01.T01:CDS |
| GCTGCAAGTATCGCTTTCTC+TGG | 0.503251 | 2:-62653603 | None:intergenic |
| TGAGATTACCGCGAAGAAGT+TGG | 0.506310 | 2:+62653662 | MsG0280010001.01.T01:CDS |
| ACAACAGTAAAACCAACAAC+TGG | 0.508318 | 2:-62654488 | None:intergenic |
| TGAAATGAGATCTGCAAAAT+GGG | 0.517744 | 2:+62653908 | MsG0280010001.01.T01:CDS |
| AGAAGTTGGAATCACAGGTT+AGG | 0.521372 | 2:+62653676 | MsG0280010001.01.T01:CDS |
| GCTGAATCGAAGGAGATAAA+GGG | 0.532899 | 2:+62653624 | MsG0280010001.01.T01:CDS |
| AAAGGATCACGATCGCGTGC+TGG | 0.540329 | 2:+62654584 | MsG0280010001.01.T01:CDS |
| GAGAAGAGATTGAATCAAAG+TGG | 0.546796 | 2:+62653768 | MsG0280010001.01.T01:CDS |
| TGGAAAAGACTACAATAACT+TGG | 0.552801 | 2:+62653334 | MsG0280010001.01.T01:CDS |
| TGAGTTGATTCTTCTGCATG+AGG | 0.560321 | 2:-62654556 | None:intergenic |
| AAGAATCAACTCAAGGTGAA+AGG | 0.569431 | 2:+62654566 | MsG0280010001.01.T01:CDS |
| TCAAGCTGAAATCTTTCAAG+TGG | 0.572316 | 2:+62654370 | MsG0280010001.01.T01:CDS |
| CAAGCTGAAATCTTTCAAGT+GGG | 0.598623 | 2:+62654371 | MsG0280010001.01.T01:CDS |
| TCCAAAGGATGAAACAAACA+TGG | 0.604906 | 2:+62653314 | MsG0280010001.01.T01:CDS |
| GATACTTGCAGCTGAATCGA+AGG | 0.610878 | 2:+62653614 | MsG0280010001.01.T01:CDS |
| CAGAAGCTTCAATTCCATCA+GGG | 0.612641 | 2:-62653503 | None:intergenic |
| TATATCTGATACAAATCCAA+AGG | 0.615715 | 2:+62653299 | MsG0280010001.01.T01:CDS |
| GATCGATTCGAAACTTTGTG+AGG | 0.630009 | 2:+62653874 | MsG0280010001.01.T01:CDS |
| AGTATCGCTTTCTCTGGTGA+AGG | 0.630806 | 2:-62653597 | None:intergenic |
| CACCAAGCAAGAAATTAGCT+AGG | 0.637970 | 2:+62653229 | MsG0280010001.01.T01:CDS |
| AAAACAGTAGCAAAATGGCT+AGG | 0.639681 | 2:-62653837 | None:intergenic |
| CATGCAGAAGAATCAACTCA+AGG | 0.660821 | 2:+62654559 | MsG0280010001.01.T01:CDS |
| GTGCTGGTCCGATTTCACAC+AGG | 0.697518 | 2:+62654600 | MsG0280010001.01.T01:CDS |
| TGATGCTATTGAACACAATG+TGG | 0.709156 | 2:+62653947 | MsG0280010001.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAAAAAATCAACAAAAT+TGG | + | Chr2:62654084-62654103 | MsG0280010001.01.T01:CDS | 15.0% |
| ! | ATAATGTTGTTCACTTATCA+GGG | + | Chr2:62653808-62653827 | MsG0280010001.01.T01:CDS | 25.0% |
| ! | CATTTGGAAGATTGAAATTA+GGG | - | Chr2:62654049-62654068 | None:intergenic | 25.0% |
| ! | GTTTCTTAAAGAGAAATTAG+TGG | + | Chr2:62653719-62653738 | MsG0280010001.01.T01:CDS | 25.0% |
| ! | TAATTTCAATCTTCCAAATG+AGG | + | Chr2:62654049-62654068 | MsG0280010001.01.T01:CDS | 25.0% |
| ! | TATATCTGATACAAATCCAA+AGG | + | Chr2:62653299-62653318 | MsG0280010001.01.T01:CDS | 25.0% |
| ! | TCATTTGGAAGATTGAAATT+AGG | - | Chr2:62654050-62654069 | None:intergenic | 25.0% |
| !! | AAAAATGATGACTCCATTTT+TGG | - | Chr2:62654224-62654243 | None:intergenic | 25.0% |
| !!! | AAAATGGAGTCATCATTTTT+TGG | + | Chr2:62654224-62654243 | MsG0280010001.01.T01:CDS | 25.0% |
| !!! | GATGCAAAAAAATCACTTTT+TGG | - | Chr2:62654290-62654309 | None:intergenic | 25.0% |
| !!! | TGTTGATTTTTTCTATCATC+AGG | - | Chr2:62654080-62654099 | None:intergenic | 25.0% |
| ATGAAATGAGATCTGCAAAA+TGG | + | Chr2:62653907-62653926 | MsG0280010001.01.T01:CDS | 30.0% | |
| GATAATGTTGTTCACTTATC+AGG | + | Chr2:62653807-62653826 | MsG0280010001.01.T01:CDS | 30.0% | |
| TGAAATGAGATCTGCAAAAT+GGG | + | Chr2:62653908-62653927 | MsG0280010001.01.T01:CDS | 30.0% | |
| TGGAAAAGACTACAATAACT+TGG | + | Chr2:62653334-62653353 | MsG0280010001.01.T01:CDS | 30.0% | |
| ! | AAATCTTTCAAGTGGGAAAA+GGG | + | Chr2:62654378-62654397 | MsG0280010001.01.T01:CDS | 30.0% |
| ! | TAGATTTTCTGATGTGTACA+TGG | + | Chr2:62654403-62654422 | MsG0280010001.01.T01:CDS | 30.0% |
| ! | TTTTGCATCTTTTGCTGAAA+TGG | + | Chr2:62654301-62654320 | MsG0280010001.01.T01:CDS | 30.0% |
| !! | TTGTTTAGCCTTTTCTTTTG+AGG | + | Chr2:62654346-62654365 | MsG0280010001.01.T01:CDS | 30.0% |
| AAAACAGTAGCAAAATGGCT+AGG | - | Chr2:62653840-62653859 | None:intergenic | 35.0% | |
| AAGAATCAACTCAAGGTGAA+AGG | + | Chr2:62654566-62654585 | MsG0280010001.01.T01:CDS | 35.0% | |
| ACAACAGTAAAACCAACAAC+TGG | - | Chr2:62654491-62654510 | None:intergenic | 35.0% | |
| AGCTTGAACCTCAAAAGAAA+AGG | - | Chr2:62654357-62654376 | None:intergenic | 35.0% | |
| GACGAAAAACAGTAGCAAAA+TGG | - | Chr2:62653845-62653864 | None:intergenic | 35.0% | |
| GAGAAGAGATTGAATCAAAG+TGG | + | Chr2:62653768-62653787 | MsG0280010001.01.T01:CDS | 35.0% | |
| TCAAGCTGAAATCTTTCAAG+TGG | + | Chr2:62654370-62654389 | MsG0280010001.01.T01:CDS | 35.0% | |
| TCCAAAGGATGAAACAAACA+TGG | + | Chr2:62653314-62653333 | MsG0280010001.01.T01:CDS | 35.0% | |
| TCCATGTTTGTTTCATCCTT+TGG | - | Chr2:62653318-62653337 | None:intergenic | 35.0% | |
| TGATGCTATTGAACACAATG+TGG | + | Chr2:62653947-62653966 | MsG0280010001.01.T01:CDS | 35.0% | |
| TTCAGCATATGCACCTTTAA+CGG | - | Chr2:62653457-62653476 | None:intergenic | 35.0% | |
| TTCCTAGCTAATTTCTTGCT+TGG | - | Chr2:62653234-62653253 | None:intergenic | 35.0% | |
| ! | CAAGCTGAAATCTTTCAAGT+GGG | + | Chr2:62654371-62654390 | MsG0280010001.01.T01:CDS | 35.0% |
| ! | GAAATCTTTCAAGTGGGAAA+AGG | + | Chr2:62654377-62654396 | MsG0280010001.01.T01:CDS | 35.0% |
| ! | GAGACTTGTTCATCCAAAAA+TGG | + | Chr2:62654208-62654227 | MsG0280010001.01.T01:CDS | 35.0% |
| ! | GTTTTACCAATCCTAAAACC+AGG | - | Chr2:62654515-62654534 | None:intergenic | 35.0% |
| ! | TTTTGCTGAAATGGCTAAGA+GGG | + | Chr2:62654310-62654329 | MsG0280010001.01.T01:CDS | 35.0% |
| !! | TGCTCTAAGATGAAGAACTT+TGG | - | Chr2:62653262-62653281 | None:intergenic | 35.0% |
| !! | TTACTGTTGTTCCTGGTTTT+AGG | + | Chr2:62654501-62654520 | MsG0280010001.01.T01:CDS | 35.0% |
| !! | TTTTTGGCAACATGATTCAC+AGG | + | Chr2:62654240-62654259 | MsG0280010001.01.T01:CDS | 35.0% |
| AATTGCGCAAACGATGATCT+TGG | - | Chr2:62654170-62654189 | None:intergenic | 40.0% | |
| AGAAGTTGGAATCACAGGTT+AGG | + | Chr2:62653676-62653695 | MsG0280010001.01.T01:CDS | 40.0% | |
| AGCTGAATCGAAGGAGATAA+AGG | + | Chr2:62653623-62653642 | MsG0280010001.01.T01:CDS | 40.0% | |
| CACCAAGCAAGAAATTAGCT+AGG | + | Chr2:62653229-62653248 | MsG0280010001.01.T01:CDS | 40.0% | |
| CAGAAGCTTCAATTCCATCA+GGG | - | Chr2:62653506-62653525 | None:intergenic | 40.0% | |
| CATGCAGAAGAATCAACTCA+AGG | + | Chr2:62654559-62654578 | MsG0280010001.01.T01:CDS | 40.0% | |
| GCTAGCATTTCAACCGTTAA+AGG | + | Chr2:62653441-62653460 | MsG0280010001.01.T01:CDS | 40.0% | |
| GCTGAATCGAAGGAGATAAA+GGG | + | Chr2:62653624-62653643 | MsG0280010001.01.T01:CDS | 40.0% | |
| TCAATTCCATCAGGGTCAAA+AGG | - | Chr2:62653498-62653517 | None:intergenic | 40.0% | |
| TCAGAAGAAGAACCAGTTGT+TGG | + | Chr2:62654476-62654495 | MsG0280010001.01.T01:CDS | 40.0% | |
| TCAGAAGCTTCAATTCCATC+AGG | - | Chr2:62653507-62653526 | None:intergenic | 40.0% | |
| ! | ATTCACAGGAACCTTTTGAG+TGG | + | Chr2:62654254-62654273 | MsG0280010001.01.T01:CDS | 40.0% |
| ! | CTTTTGCTGAAATGGCTAAG+AGG | + | Chr2:62654309-62654328 | MsG0280010001.01.T01:CDS | 40.0% |
| !! | GATCGATTCGAAACTTTGTG+AGG | + | Chr2:62653874-62653893 | MsG0280010001.01.T01:CDS | 40.0% |
| !! | TGAGTTGATTCTTCTGCATG+AGG | - | Chr2:62654559-62654578 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTACTGTTGTTCC+TGG | + | Chr2:62654494-62654513 | MsG0280010001.01.T01:CDS | 40.0% |
| !!! | GTTGTTCCTGGTTTTAGGAT+TGG | + | Chr2:62654506-62654525 | MsG0280010001.01.T01:CDS | 40.0% |
| AGTATCGCTTTCTCTGGTGA+AGG | - | Chr2:62653600-62653619 | None:intergenic | 45.0% | |
| CTGTGATTCCAACTTCTTCG+CGG | - | Chr2:62653673-62653692 | None:intergenic | 45.0% | |
| CTTCTTCGCGGTAATCTCAT+AGG | - | Chr2:62653661-62653680 | None:intergenic | 45.0% | |
| GAAACTCTCCACCACTCAAA+AGG | - | Chr2:62654268-62654287 | None:intergenic | 45.0% | |
| GATACTTGCAGCTGAATCGA+AGG | + | Chr2:62653614-62653633 | MsG0280010001.01.T01:CDS | 45.0% | |
| TGAGATTACCGCGAAGAAGT+TGG | + | Chr2:62653662-62653681 | MsG0280010001.01.T01:CDS | 45.0% | |
| !! | TCATCAGGAAGTGCCTCATT+TGG | - | Chr2:62654065-62654084 | None:intergenic | 45.0% |
| !! | TGCTACTGTTTTTCGTCACG+CGG | + | Chr2:62653848-62653867 | MsG0280010001.01.T01:CDS | 45.0% |
| CATCGTTTGCGCAATTCTGC+AGG | + | Chr2:62654174-62654193 | MsG0280010001.01.T01:CDS | 50.0% | |
| CGCGAAGAAGTTGGAATCAC+AGG | + | Chr2:62653671-62653690 | MsG0280010001.01.T01:CDS | 50.0% | |
| ! | CAGACACCTTTTGACCCTGA+TGG | + | Chr2:62653489-62653508 | MsG0280010001.01.T01:CDS | 50.0% |
| ! | GCTGCAAGTATCGCTTTCTC+TGG | - | Chr2:62653606-62653625 | None:intergenic | 50.0% |
| !! | CACAGGAACCTTTTGAGTGG+TGG | + | Chr2:62654257-62654276 | MsG0280010001.01.T01:CDS | 50.0% |
| !! | TTGCTTGGTGTCACTGCTGA+AGG | - | Chr2:62653219-62653238 | None:intergenic | 50.0% |
| AAAGGATCACGATCGCGTGC+TGG | + | Chr2:62654584-62654603 | MsG0280010001.01.T01:CDS | 55.0% | |
| ! | GTGCTGGTCCGATTTCACAC+AGG | + | Chr2:62654600-62654619 | MsG0280010001.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 62653201 | 62654628 | 62653201 | ID=MsG0280010001.01;Name=MsG0280010001.01 |
| Chr2 | mRNA | 62653201 | 62654628 | 62653201 | ID=MsG0280010001.01.T01;Parent=MsG0280010001.01;Name=MsG0280010001.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|475 |
| Chr2 | exon | 62653201 | 62654628 | 62653201 | ID=MsG0280010001.01.T01:exon:34724;Parent=MsG0280010001.01.T01 |
| Chr2 | CDS | 62653201 | 62654628 | 62653201 | ID=MsG0280010001.01.T01:cds;Parent=MsG0280010001.01.T01 |
| Gene Sequence |
| Protein sequence |
