Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040523.01.T01 | XP_003625157.1 | 99.571 | 233 | 1 | 0 | 1 | 233 | 323 | 555 | 9.53E-162 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040523.01.T01 | P93755 | 72.689 | 238 | 42 | 7 | 1 | 233 | 320 | 539 | 1.72E-103 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000318.01 | MsG0780040523.01 | 0.802362 | 5.816412e-49 | 2.843811e-46 |
| MsG0180000614.01 | MsG0780040523.01 | -0.802248 | 6.139362e-49 | 2.992913e-46 |
| MsG0180000842.01 | MsG0780040523.01 | 0.840001 | 1.130992e-57 | 1.589519e-54 |
| MsG0180002482.01 | MsG0780040523.01 | -0.818360 | 2.041810e-52 | 1.525166e-49 |
| MsG0180004844.01 | MsG0780040523.01 | 0.813461 | 2.530167e-51 | 1.653449e-48 |
| MsG0180004886.01 | MsG0780040523.01 | 0.843699 | 1.193626e-58 | 1.882859e-55 |
| MsG0780040523.01 | MsG0780040858.01 | -0.808129 | 3.604441e-50 | 2.044259e-47 |
| MsG0780040523.01 | MsG0780041553.01 | 0.803127 | 4.043178e-49 | 2.015569e-46 |
| MsG0780040523.01 | MsG0880044225.01 | 0.832811 | 7.641095e-56 | 8.635604e-53 |
| MsG0780040523.01 | MsG0880047165.01 | -0.817263 | 3.610427e-52 | 2.616617e-49 |
| MsG0380012661.01 | MsG0780040523.01 | 0.870148 | 1.816497e-66 | 6.992506e-63 |
| MsG0580025985.01 | MsG0780040523.01 | 0.813160 | 2.945266e-51 | 1.908759e-48 |
| MsG0280006671.01 | MsG0780040523.01 | 0.818909 | 1.532811e-52 | 1.162483e-49 |
| MsG0280007111.01 | MsG0780040523.01 | 0.842236 | 2.925635e-58 | 4.407565e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040523.01.T01 | MTR_7g092070 | 99.571 | 233 | 1 | 0 | 1 | 233 | 323 | 555 | 1.15e-165 | 477 |
| MsG0780040523.01.T01 | MTR_3g029590 | 71.186 | 236 | 58 | 6 | 1 | 231 | 323 | 553 | 9.04e-106 | 323 |
| MsG0780040523.01.T01 | MTR_1g050438 | 57.203 | 236 | 86 | 5 | 2 | 234 | 288 | 511 | 6.90e-74 | 237 |
| MsG0780040523.01.T01 | MTR_0728s0020 | 57.203 | 236 | 86 | 5 | 2 | 234 | 304 | 527 | 1.33e-73 | 237 |
| MsG0780040523.01.T01 | MTR_5g071070 | 43.396 | 212 | 89 | 7 | 2 | 190 | 208 | 411 | 2.15e-42 | 154 |
| MsG0780040523.01.T01 | MTR_5g071070 | 43.396 | 212 | 89 | 7 | 2 | 190 | 290 | 493 | 3.38e-42 | 154 |
| MsG0780040523.01.T01 | MTR_5g082830 | 44.856 | 243 | 96 | 8 | 2 | 225 | 277 | 500 | 4.50e-42 | 153 |
| MsG0780040523.01.T01 | MTR_3g435680 | 48.851 | 174 | 54 | 5 | 2 | 173 | 211 | 351 | 6.95e-40 | 143 |
| MsG0780040523.01.T01 | MTR_3g435590 | 60.000 | 100 | 35 | 1 | 1 | 100 | 297 | 391 | 2.86e-33 | 127 |
| MsG0780040523.01.T01 | MTR_1g075890 | 42.929 | 198 | 79 | 6 | 3 | 195 | 290 | 458 | 3.17e-33 | 128 |
| MsG0780040523.01.T01 | MTR_3g464260 | 43.005 | 193 | 84 | 5 | 2 | 194 | 241 | 407 | 1.05e-32 | 126 |
| MsG0780040523.01.T01 | MTR_3g464280 | 41.753 | 194 | 88 | 6 | 2 | 195 | 214 | 382 | 2.09e-28 | 114 |
| MsG0780040523.01.T01 | MTR_3g464270 | 36.598 | 194 | 99 | 4 | 2 | 195 | 70 | 239 | 1.53e-26 | 107 |
| MsG0780040523.01.T01 | MTR_3g070880 | 38.286 | 175 | 63 | 5 | 2 | 168 | 223 | 360 | 5.43e-25 | 104 |
| MsG0780040523.01.T01 | MTR_2g090605 | 72.549 | 51 | 14 | 0 | 2 | 52 | 137 | 187 | 1.65e-20 | 90.9 |
| MsG0780040523.01.T01 | MTR_6g090380 | 83.721 | 43 | 7 | 0 | 2 | 44 | 163 | 205 | 2.37e-20 | 90.1 |
| MsG0780040523.01.T01 | MTR_8g102100 | 49.020 | 102 | 38 | 2 | 2 | 95 | 141 | 236 | 3.32e-20 | 89.7 |
| MsG0780040523.01.T01 | MTR_3g103960 | 37.662 | 154 | 73 | 4 | 2 | 145 | 114 | 254 | 7.62e-19 | 84.3 |
| MsG0780040523.01.T01 | MTR_4g078660 | 72.093 | 43 | 12 | 0 | 2 | 44 | 120 | 162 | 1.85e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040523.01.T01 | AT2G41900 | 72.689 | 238 | 42 | 7 | 1 | 233 | 320 | 539 | 1.76e-104 | 320 |
| MsG0780040523.01.T01 | AT5G12850 | 59.833 | 239 | 80 | 6 | 1 | 234 | 316 | 543 | 1.37e-86 | 273 |
| MsG0780040523.01.T01 | AT5G58620 | 48.768 | 203 | 73 | 7 | 2 | 194 | 269 | 450 | 4.37e-43 | 155 |
| MsG0780040523.01.T01 | AT2G40140 | 41.919 | 198 | 70 | 5 | 2 | 194 | 274 | 431 | 1.08e-32 | 126 |
| MsG0780040523.01.T01 | AT2G40140 | 41.919 | 198 | 70 | 5 | 2 | 194 | 274 | 431 | 1.08e-32 | 126 |
| MsG0780040523.01.T01 | AT3G55980 | 51.351 | 148 | 44 | 8 | 2 | 139 | 271 | 400 | 1.47e-31 | 123 |
| MsG0780040523.01.T01 | AT3G55980 | 49.342 | 152 | 41 | 8 | 2 | 139 | 338 | 467 | 2.94e-31 | 122 |
| MsG0780040523.01.T01 | AT4G29190 | 48.148 | 108 | 53 | 2 | 2 | 106 | 139 | 246 | 1.32e-20 | 90.5 |
| MsG0780040523.01.T01 | AT1G03790 | 66.102 | 59 | 17 | 1 | 2 | 57 | 143 | 201 | 9.83e-20 | 88.6 |
| MsG0780040523.01.T01 | AT2G19810 | 73.333 | 45 | 12 | 0 | 2 | 46 | 138 | 182 | 4.98e-19 | 86.3 |
| MsG0780040523.01.T01 | AT2G25900 | 73.333 | 45 | 12 | 0 | 2 | 46 | 150 | 194 | 1.22e-18 | 84.7 |
| MsG0780040523.01.T01 | AT2G25900 | 73.333 | 45 | 12 | 0 | 2 | 46 | 150 | 194 | 1.22e-18 | 84.7 |
| MsG0780040523.01.T01 | AT5G44260 | 68.889 | 45 | 14 | 0 | 2 | 46 | 121 | 165 | 3.75e-17 | 80.9 |
| MsG0780040523.01.T01 | AT5G07500 | 72.093 | 43 | 12 | 0 | 2 | 44 | 112 | 154 | 3.85e-16 | 76.6 |
Find 71 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTGCAGGCGGCTTCTTA+TGG | 0.247506 | 7:+78771062 | MsG0780040523.01.T01:CDS |
| AAAACAGTTGAAGTCAGATT+TGG | 0.296997 | 7:-78770937 | None:intergenic |
| TACAATGGCCGAAGCTCTTC+AGG | 0.319804 | 7:-78770457 | None:intergenic |
| ATCCCAGCCTTGCATCTTCC+TGG | 0.322304 | 7:+78770673 | MsG0780040523.01.T01:CDS |
| GCAGCCATGAGCATGTTGCC+TGG | 0.353518 | 7:+78770544 | MsG0780040523.01.T01:CDS |
| ACAGGCATGCCAACTCATTA+AGG | 0.364336 | 7:-78770798 | None:intergenic |
| CGGCCATTGTATGTTTCAAC+TGG | 0.366588 | 7:+78770469 | MsG0780040523.01.T01:CDS |
| AAGAGATCATCAAGATTTGA+TGG | 0.375352 | 7:-78770880 | None:intergenic |
| TCAAGATTTGATGGATTCAA+TGG | 0.378043 | 7:-78770871 | None:intergenic |
| CTTGAGCCCATTGGAGAGAT+AGG | 0.383762 | 7:-78771125 | None:intergenic |
| TTGTTGCTGTTGATCATAAT+CGG | 0.386100 | 7:-78770773 | None:intergenic |
| CTAGACTGAAGATTACTTCC+AGG | 0.391284 | 7:-78770691 | None:intergenic |
| AGATGCAAGGCTGGGATGTT+TGG | 0.402195 | 7:-78770667 | None:intergenic |
| TGTTGATCATCATTTATTGC+AGG | 0.414822 | 7:+78771049 | MsG0780040523.01.T01:CDS |
| TTTCACACAACTCTGTTGCT+TGG | 0.421951 | 7:+78770638 | MsG0780040523.01.T01:CDS |
| TCTTATGGTGTTCAGCCATC+AGG | 0.430030 | 7:+78771077 | MsG0780040523.01.T01:CDS |
| CGTGGAGACATTCTTCCTGA+TGG | 0.449642 | 7:-78771092 | None:intergenic |
| ACTCCACCCATGTCACCTTC+TGG | 0.450662 | 7:+78770607 | MsG0780040523.01.T01:CDS |
| GGCAAAGAAGCAAACTCTCC+TGG | 0.456158 | 7:-78770428 | None:intergenic |
| CTTCCAGGAAGATGCAAGGC+TGG | 0.462334 | 7:-78770676 | None:intergenic |
| GACATCGAAGAAGGTGAGCC+AGG | 0.468116 | 7:-78770562 | None:intergenic |
| AATTAATATGACGTGGAGAC+AGG | 0.471650 | 7:-78770816 | None:intergenic |
| AGGACGGTACAAATTGTTCC+AGG | 0.478546 | 7:+78770410 | MsG0780040523.01.T01:CDS |
| GGTGACATGGGTGGAGTGAA+TGG | 0.492460 | 7:-78770601 | None:intergenic |
| GTCAAGCACGTCTTCTGCCA+TGG | 0.494988 | 7:+78770513 | MsG0780040523.01.T01:CDS |
| CAATGCTAGAGATATTCATA+TGG | 0.504807 | 7:+78770732 | MsG0780040523.01.T01:CDS |
| CCCACACTCCTGAAGAGCTT+CGG | 0.505759 | 7:+78770449 | MsG0780040523.01.T01:CDS |
| TGTACCGTCCTTGCAGAGAC+GGG | 0.511148 | 7:-78770398 | None:intergenic |
| GTGGAACCTATCTCTCCAAT+GGG | 0.516161 | 7:+78771119 | MsG0780040523.01.T01:CDS |
| GAGATAGGTTCCACGTTTCG+TGG | 0.525659 | 7:-78771110 | None:intergenic |
| CTATCTCTCCAATGGGCTCA+AGG | 0.530752 | 7:+78771126 | MsG0780040523.01.T01:CDS |
| ATTGACATCCTTGAGCCCAT+TGG | 0.533162 | 7:-78771134 | None:intergenic |
| AAGACAGCTGATTTGTGAGT+CGG | 0.538872 | 7:-78770964 | None:intergenic |
| GACATGTGTGAATATGCTCA+TGG | 0.543598 | 7:+78770337 | None:intergenic |
| CGTGGAACCTATCTCTCCAA+TGG | 0.547113 | 7:+78771118 | MsG0780040523.01.T01:CDS |
| GGGCTCAAGGATGTCAATGC+TGG | 0.547672 | 7:+78771139 | MsG0780040523.01.T01:CDS |
| GCCGAAGCTCTTCAGGAGTG+TGG | 0.548910 | 7:-78770450 | None:intergenic |
| AGACGGGTTCTATATTGTGC+AGG | 0.553860 | 7:-78770382 | None:intergenic |
| ATTCAATGGCTTCATTCGAC+CGG | 0.556611 | 7:-78770857 | None:intergenic |
| CCCATGTCACCTTCTGGCAA+TGG | 0.558647 | 7:+78770613 | MsG0780040523.01.T01:CDS |
| TTCCAGGAAGATGCAAGGCT+GGG | 0.563396 | 7:-78770675 | None:intergenic |
| TTGTACCGTCCTTGCAGAGA+CGG | 0.564971 | 7:-78770399 | None:intergenic |
| GACATGACAGACATCGAAGA+AGG | 0.569249 | 7:-78770571 | None:intergenic |
| CATGGCTGCAGCAAAATCCA+TGG | 0.577281 | 7:-78770530 | None:intergenic |
| GTATGTTTCAACTGGTTCTG+CGG | 0.583036 | 7:+78770477 | MsG0780040523.01.T01:CDS |
| TGAGCCAGGCAACATGCTCA+TGG | 0.584222 | 7:-78770548 | None:intergenic |
| GACGTGCTTGACCGAGGTGA+GGG | 0.585321 | 7:-78770502 | None:intergenic |
| CCGAAGCTCTTCAGGAGTGT+GGG | 0.587103 | 7:-78770449 | None:intergenic |
| GCAACAACTCCTTAATGAGT+TGG | 0.589263 | 7:+78770789 | MsG0780040523.01.T01:CDS |
| GTTCTGCGGTTCCCTCACCT+CGG | 0.594015 | 7:+78770491 | MsG0780040523.01.T01:CDS |
| AGACGTGCTTGACCGAGGTG+AGG | 0.601319 | 7:-78770503 | None:intergenic |
| AAGAATGTCTCCACGAAACG+TGG | 0.605224 | 7:+78771100 | MsG0780040523.01.T01:CDS |
| TCTAACAGTCTTAGCCGCTC+CGG | 0.606773 | 7:+78770838 | MsG0780040523.01.T01:CDS |
| GCCATTGCCAGAAGGTGACA+TGG | 0.611555 | 7:-78770614 | None:intergenic |
| CTGTTAGAATTAATATGACG+TGG | 0.612704 | 7:-78770823 | None:intergenic |
| ATATAGAACCCGTCTCTGCA+AGG | 0.614108 | 7:+78770390 | MsG0780040523.01.T01:CDS |
| TGATCATCATTTATTGCAGG+CGG | 0.614691 | 7:+78771052 | MsG0780040523.01.T01:CDS |
| ATATCGAGGAGAAGAACTCT+CGG | 0.618533 | 7:-78770908 | None:intergenic |
| ACATGTGTGAATATGCTCAT+GGG | 0.619210 | 7:+78770338 | None:intergenic |
| AAGGCTGGGATGTTTGGCTG+AGG | 0.620227 | 7:-78770661 | None:intergenic |
| ATGGGTGGAGTGAATGGTGA+AGG | 0.622440 | 7:-78770595 | None:intergenic |
| TTGCCAGAAGGTGACATGGG+TGG | 0.627061 | 7:-78770610 | None:intergenic |
| AGAACCCGTCTCTGCAAGGA+CGG | 0.642420 | 7:+78770394 | MsG0780040523.01.T01:CDS |
| CATGTGTGAATATGCTCATG+GGG | 0.652271 | 7:+78770339 | None:intergenic |
| GCAGAAGACGTGCTTGACCG+AGG | 0.653400 | 7:-78770508 | None:intergenic |
| TGTGAAATGCCATTGCCAGA+AGG | 0.659354 | 7:-78770622 | None:intergenic |
| ATTACTTCCAGGAAGATGCA+AGG | 0.661108 | 7:-78770680 | None:intergenic |
| ATGGCTTCATTCGACCGGAG+CGG | 0.667016 | 7:-78770852 | None:intergenic |
| GAACCAGTTGAAACATACAA+TGG | 0.685763 | 7:-78770472 | None:intergenic |
| AGATTTGGATCAGCATATCG+AGG | 0.694701 | 7:-78770922 | None:intergenic |
| CCATTGCCAGAAGGTGACAT+GGG | 0.719317 | 7:-78770613 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGAAGAAAAATTGTATTCAC+TGG | - | Chr7:78771024-78771043 | None:intergenic | 25.0% |
| AAAACAGTTGAAGTCAGATT+TGG | - | Chr7:78770940-78770959 | None:intergenic | 30.0% | |
| AAGAGATCATCAAGATTTGA+TGG | - | Chr7:78770883-78770902 | None:intergenic | 30.0% | |
| CAATGCTAGAGATATTCATA+TGG | + | Chr7:78770732-78770751 | MsG0780040523.01.T01:CDS | 30.0% | |
| CTGTTAGAATTAATATGACG+TGG | - | Chr7:78770826-78770845 | None:intergenic | 30.0% | |
| TGTTGATCATCATTTATTGC+AGG | + | Chr7:78771049-78771068 | MsG0780040523.01.T01:CDS | 30.0% | |
| ! | TTGTTGCTGTTGATCATAAT+CGG | - | Chr7:78770776-78770795 | None:intergenic | 30.0% |
| !! | TCAAGATTTGATGGATTCAA+TGG | - | Chr7:78770874-78770893 | None:intergenic | 30.0% |
| AATTAATATGACGTGGAGAC+AGG | - | Chr7:78770819-78770838 | None:intergenic | 35.0% | |
| GAACCAGTTGAAACATACAA+TGG | - | Chr7:78770475-78770494 | None:intergenic | 35.0% | |
| TGATCATCATTTATTGCAGG+CGG | + | Chr7:78771052-78771071 | MsG0780040523.01.T01:CDS | 35.0% | |
| AGATTTGGATCAGCATATCG+AGG | - | Chr7:78770925-78770944 | None:intergenic | 40.0% | |
| ATATCGAGGAGAAGAACTCT+CGG | - | Chr7:78770911-78770930 | None:intergenic | 40.0% | |
| ATTACTTCCAGGAAGATGCA+AGG | - | Chr7:78770683-78770702 | None:intergenic | 40.0% | |
| ATTCAATGGCTTCATTCGAC+CGG | - | Chr7:78770860-78770879 | None:intergenic | 40.0% | |
| CTAGACTGAAGATTACTTCC+AGG | - | Chr7:78770694-78770713 | None:intergenic | 40.0% | |
| GCAACAACTCCTTAATGAGT+TGG | + | Chr7:78770789-78770808 | MsG0780040523.01.T01:CDS | 40.0% | |
| TTTCACACAACTCTGTTGCT+TGG | + | Chr7:78770638-78770657 | MsG0780040523.01.T01:CDS | 40.0% | |
| !! | AAGACAGCTGATTTGTGAGT+CGG | - | Chr7:78770967-78770986 | None:intergenic | 40.0% |
| !! | GTATGTTTCAACTGGTTCTG+CGG | + | Chr7:78770477-78770496 | MsG0780040523.01.T01:CDS | 40.0% |
| AAGAATGTCTCCACGAAACG+TGG | + | Chr7:78771100-78771119 | MsG0780040523.01.T01:CDS | 45.0% | |
| ACAGGCATGCCAACTCATTA+AGG | - | Chr7:78770801-78770820 | None:intergenic | 45.0% | |
| AGGACGGTACAAATTGTTCC+AGG | + | Chr7:78770410-78770429 | MsG0780040523.01.T01:CDS | 45.0% | |
| ATATAGAACCCGTCTCTGCA+AGG | + | Chr7:78770390-78770409 | MsG0780040523.01.T01:CDS | 45.0% | |
| ATTGACATCCTTGAGCCCAT+TGG | - | Chr7:78771137-78771156 | None:intergenic | 45.0% | |
| CGGCCATTGTATGTTTCAAC+TGG | + | Chr7:78770469-78770488 | MsG0780040523.01.T01:CDS | 45.0% | |
| GACATGACAGACATCGAAGA+AGG | - | Chr7:78770574-78770593 | None:intergenic | 45.0% | |
| GTGGAACCTATCTCTCCAAT+GGG | + | Chr7:78771119-78771138 | MsG0780040523.01.T01:CDS | 45.0% | |
| TCTTATGGTGTTCAGCCATC+AGG | + | Chr7:78771077-78771096 | MsG0780040523.01.T01:CDS | 45.0% | |
| TGTGAAATGCCATTGCCAGA+AGG | - | Chr7:78770625-78770644 | None:intergenic | 45.0% | |
| TTATTGCAGGCGGCTTCTTA+TGG | + | Chr7:78771062-78771081 | MsG0780040523.01.T01:CDS | 45.0% | |
| ! | AGACGGGTTCTATATTGTGC+AGG | - | Chr7:78770385-78770404 | None:intergenic | 45.0% |
| AGATGCAAGGCTGGGATGTT+TGG | - | Chr7:78770670-78770689 | None:intergenic | 50.0% | |
| ATGGGTGGAGTGAATGGTGA+AGG | - | Chr7:78770598-78770617 | None:intergenic | 50.0% | |
| CATGGCTGCAGCAAAATCCA+TGG | - | Chr7:78770533-78770552 | None:intergenic | 50.0% | |
| CCATTGCCAGAAGGTGACAT+GGG | - | Chr7:78770616-78770635 | None:intergenic | 50.0% | |
| CGTGGAACCTATCTCTCCAA+TGG | + | Chr7:78771118-78771137 | MsG0780040523.01.T01:CDS | 50.0% | |
| CGTGGAGACATTCTTCCTGA+TGG | - | Chr7:78771095-78771114 | None:intergenic | 50.0% | |
| CTTGAGCCCATTGGAGAGAT+AGG | - | Chr7:78771128-78771147 | None:intergenic | 50.0% | |
| GAGATAGGTTCCACGTTTCG+TGG | - | Chr7:78771113-78771132 | None:intergenic | 50.0% | |
| GGCAAAGAAGCAAACTCTCC+TGG | - | Chr7:78770431-78770450 | None:intergenic | 50.0% | |
| TACAATGGCCGAAGCTCTTC+AGG | - | Chr7:78770460-78770479 | None:intergenic | 50.0% | |
| TCTAACAGTCTTAGCCGCTC+CGG | + | Chr7:78770838-78770857 | MsG0780040523.01.T01:CDS | 50.0% | |
| TTCCAGGAAGATGCAAGGCT+GGG | - | Chr7:78770678-78770697 | None:intergenic | 50.0% | |
| TTGTACCGTCCTTGCAGAGA+CGG | - | Chr7:78770402-78770421 | None:intergenic | 50.0% | |
| ! | CTATCTCTCCAATGGGCTCA+AGG | + | Chr7:78771126-78771145 | MsG0780040523.01.T01:CDS | 50.0% |
| AAGGCTGGGATGTTTGGCTG+AGG | - | Chr7:78770664-78770683 | None:intergenic | 55.0% | |
| ACTCCACCCATGTCACCTTC+TGG | + | Chr7:78770607-78770626 | MsG0780040523.01.T01:CDS | 55.0% | |
| AGAACCCGTCTCTGCAAGGA+CGG | + | Chr7:78770394-78770413 | MsG0780040523.01.T01:CDS | 55.0% | |
| ATCCCAGCCTTGCATCTTCC+TGG | + | Chr7:78770673-78770692 | MsG0780040523.01.T01:CDS | 55.0% | |
| ATGGCTTCATTCGACCGGAG+CGG | - | Chr7:78770855-78770874 | None:intergenic | 55.0% | |
| CCCACACTCCTGAAGAGCTT+CGG | + | Chr7:78770449-78770468 | MsG0780040523.01.T01:CDS | 55.0% | |
| CCCATGTCACCTTCTGGCAA+TGG | + | Chr7:78770613-78770632 | MsG0780040523.01.T01:CDS | 55.0% | |
| CTTCCAGGAAGATGCAAGGC+TGG | - | Chr7:78770679-78770698 | None:intergenic | 55.0% | |
| GACATCGAAGAAGGTGAGCC+AGG | - | Chr7:78770565-78770584 | None:intergenic | 55.0% | |
| GCCATTGCCAGAAGGTGACA+TGG | - | Chr7:78770617-78770636 | None:intergenic | 55.0% | |
| GGGCTCAAGGATGTCAATGC+TGG | + | Chr7:78771139-78771158 | MsG0780040523.01.T01:CDS | 55.0% | |
| GGTGACATGGGTGGAGTGAA+TGG | - | Chr7:78770604-78770623 | None:intergenic | 55.0% | |
| GTCAAGCACGTCTTCTGCCA+TGG | + | Chr7:78770513-78770532 | MsG0780040523.01.T01:CDS | 55.0% | |
| TGAGCCAGGCAACATGCTCA+TGG | - | Chr7:78770551-78770570 | None:intergenic | 55.0% | |
| TGTACCGTCCTTGCAGAGAC+GGG | - | Chr7:78770401-78770420 | None:intergenic | 55.0% | |
| TTGCCAGAAGGTGACATGGG+TGG | - | Chr7:78770613-78770632 | None:intergenic | 55.0% | |
| ! | CCGAAGCTCTTCAGGAGTGT+GGG | - | Chr7:78770452-78770471 | None:intergenic | 55.0% |
| !!! | CTCATGGGGTTTTCGAGTGC+TGG | + | Chr7:78770353-78770372 | MsG0780040523.01.T01:CDS | 55.0% |
| AGACGTGCTTGACCGAGGTG+AGG | - | Chr7:78770506-78770525 | None:intergenic | 60.0% | |
| GACGTGCTTGACCGAGGTGA+GGG | - | Chr7:78770505-78770524 | None:intergenic | 60.0% | |
| GCAGAAGACGTGCTTGACCG+AGG | - | Chr7:78770511-78770530 | None:intergenic | 60.0% | |
| GCAGCCATGAGCATGTTGCC+TGG | + | Chr7:78770544-78770563 | MsG0780040523.01.T01:CDS | 60.0% | |
| GCCGAAGCTCTTCAGGAGTG+TGG | - | Chr7:78770453-78770472 | None:intergenic | 60.0% | |
| GTTCTGCGGTTCCCTCACCT+CGG | + | Chr7:78770491-78770510 | MsG0780040523.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 78770340 | 78771197 | 78770340 | ID=MsG0780040523.01;Name=MsG0780040523.01 |
| Chr7 | mRNA | 78770340 | 78771197 | 78770340 | ID=MsG0780040523.01.T01;Parent=MsG0780040523.01;Name=MsG0780040523.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|285 |
| Chr7 | exon | 78770340 | 78771197 | 78770340 | ID=MsG0780040523.01.T01:exon:16121;Parent=MsG0780040523.01.T01 |
| Chr7 | CDS | 78770340 | 78771197 | 78770340 | ID=MsG0780040523.01.T01:cds;Parent=MsG0780040523.01.T01 |
| Gene Sequence |
| Protein sequence |
