AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002949.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002949.01.T01 MTR_1g015730 70.934 289 64 6 70 351 121 396 3.27e-131 380
MsG0180002949.01.T01 MTR_1g029650 62.838 296 92 8 70 350 112 404 2.14e-115 340
MsG0180002949.01.T01 MTR_5g058620 61.594 276 78 9 101 351 11 283 1.17e-101 301
MsG0180002949.01.T01 MTR_1g058870 61.594 276 78 9 101 351 11 283 1.17e-101 301
MsG0180002949.01.T01 MTR_7g078900 51.935 310 123 9 66 351 117 424 1.62e-90 278
MsG0180002949.01.T01 MTR_1g015740 62.083 240 55 5 119 351 118 328 3.63e-89 271
MsG0180002949.01.T01 MTR_4g013185 49.684 316 125 9 66 350 114 426 4.87e-88 271
MsG0180002949.01.T01 MTR_4g013175 48.580 317 129 9 66 351 114 427 1.28e-84 263
MsG0180002949.01.T01 MTR_4g013180 50.347 288 116 7 72 334 102 387 1.35e-83 261
MsG0180002949.01.T01 MTR_1g088120 47.040 321 132 9 62 350 97 411 1.87e-80 251
MsG0180002949.01.T01 MTR_7g079160 49.013 304 115 11 66 334 119 417 6.45e-77 244
MsG0180002949.01.T01 MTR_7g078840 46.519 316 133 9 70 350 118 432 3.56e-76 241
MsG0180002949.01.T01 MTR_7g077070 45.031 322 143 11 62 351 112 431 1.49e-72 232
MsG0180002949.01.T01 MTR_7g077970 45.886 316 133 11 70 351 112 423 2.44e-72 231
MsG0180002949.01.T01 MTR_7g078040 44.654 318 132 9 72 351 123 434 3.52e-72 231
MsG0180002949.01.T01 MTR_7g078860 51.095 274 101 11 70 321 118 380 6.21e-72 229
MsG0180002949.01.T01 MTR_4g008790 46.503 286 110 7 71 332 162 428 1.50e-71 230
MsG0180002949.01.T01 MTR_0242s0060 43.082 318 139 8 67 351 111 419 1.68e-67 218
MsG0180002949.01.T01 MTR_0242s0040 43.082 318 139 8 67 351 111 419 1.68e-67 218
MsG0180002949.01.T01 MTR_3g013470 43.772 281 122 7 72 337 106 365 1.62e-63 206
MsG0180002949.01.T01 MTR_7g056503 44.781 297 125 9 72 347 117 395 3.70e-63 206
MsG0180002949.01.T01 MTR_7g077990 43.831 308 123 11 60 346 112 390 2.85e-61 201
MsG0180002949.01.T01 MTR_7g062060 43.243 296 131 8 72 350 125 400 9.67e-61 200
MsG0180002949.01.T01 MTR_7g056003 42.532 308 127 12 72 348 118 406 1.08e-60 200
MsG0180002949.01.T01 MTR_7g077910 45.631 309 124 13 72 350 42 336 9.28e-60 196
MsG0180002949.01.T01 MTR_7g055870 40.979 327 130 9 68 348 114 423 6.10e-59 196
MsG0180002949.01.T01 MTR_6g055210 39.365 315 141 9 72 348 116 418 1.02e-58 196
MsG0180002949.01.T01 MTR_6g088385 43.007 286 117 12 92 349 51 318 1.04e-58 192
MsG0180002949.01.T01 MTR_7g078960 44.523 283 122 10 92 350 16 287 1.28e-58 191
MsG0180002949.01.T01 MTR_1g442850 44.595 296 125 9 72 348 99 374 1.61e-58 194
MsG0180002949.01.T01 MTR_7g055930 40.244 328 133 9 67 348 113 423 2.25e-58 195
MsG0180002949.01.T01 MTR_7g091630 41.433 321 131 10 72 351 129 433 2.98e-58 194
MsG0180002949.01.T01 MTR_6g092560 39.935 308 148 9 66 349 101 395 4.45e-57 192
MsG0180002949.01.T01 MTR_5g069930 41.017 295 136 11 72 348 101 375 4.78e-57 190
MsG0180002949.01.T01 MTR_3g464470 41.584 303 128 12 72 348 99 378 1.21e-56 189
MsG0180002949.01.T01 MTR_7g056717 43.051 295 136 10 66 348 110 384 1.53e-56 189
MsG0180002949.01.T01 MTR_6g017305 40.780 282 128 10 93 348 12 280 1.57e-56 186
MsG0180002949.01.T01 MTR_7g055977 43.590 273 127 8 68 320 98 363 1.92e-56 188
MsG0180002949.01.T01 MTR_6g065510 42.294 279 120 10 94 350 72 331 2.46e-56 187
MsG0180002949.01.T01 MTR_7g009265 40.850 306 142 12 72 350 31 324 5.28e-56 186
MsG0180002949.01.T01 MTR_4g011660 40.705 312 135 8 72 348 120 416 5.49e-56 188
MsG0180002949.01.T01 MTR_2g043410 38.854 314 143 9 62 348 124 415 6.70e-56 188
MsG0180002949.01.T01 MTR_3g080370 40.694 317 133 13 72 348 115 416 7.35e-56 189
MsG0180002949.01.T01 MTR_7g056737 46.923 260 119 10 72 318 116 369 2.15e-55 186
MsG0180002949.01.T01 MTR_6g016285 40.312 320 142 10 66 348 109 416 2.62e-55 187
MsG0180002949.01.T01 MTR_7g056290 39.623 318 145 11 62 351 124 422 2.91e-55 186
MsG0180002949.01.T01 MTR_7g113500 40.364 275 137 6 71 321 93 364 3.08e-55 185
MsG0180002949.01.T01 MTR_7g055830 41.137 299 119 8 93 348 71 355 5.35e-55 184
MsG0180002949.01.T01 MTR_2g043400 39.365 315 142 9 62 348 123 416 6.89e-55 185
MsG0180002949.01.T01 MTR_4g031020 39.744 312 133 12 72 349 137 427 1.03e-54 185
MsG0180002949.01.T01 MTR_3g464500 40.803 299 138 10 72 348 120 401 1.26e-54 184
MsG0180002949.01.T01 MTR_4g128320 42.688 253 98 7 93 325 40 265 3.91e-54 179
MsG0180002949.01.T01 MTR_4g030830 37.942 311 147 9 60 348 106 392 4.88e-54 182
MsG0180002949.01.T01 MTR_7g062100 42.525 301 141 13 64 348 111 395 6.83e-54 182
MsG0180002949.01.T01 MTR_5g056020 37.273 330 145 9 66 348 105 419 1.39e-53 184
MsG0180002949.01.T01 MTR_7g057270 41.392 273 136 6 72 320 123 395 1.58e-53 182
MsG0180002949.01.T01 MTR_2g010950 38.870 301 147 7 73 348 115 403 1.71e-53 181
MsG0180002949.01.T01 MTR_7g060940 39.286 308 141 10 62 348 110 392 2.17e-53 181
MsG0180002949.01.T01 MTR_4g034860 43.750 272 122 10 72 317 125 391 2.38e-53 181
MsG0180002949.01.T01 MTR_7g061090 42.809 299 127 10 72 348 128 404 2.70e-53 181
MsG0180002949.01.T01 MTR_4g129190 38.710 310 141 12 72 350 99 390 3.85e-53 180
MsG0180002949.01.T01 MTR_0707s0020 39.414 307 140 11 72 349 154 443 4.27e-53 181
MsG0180002949.01.T01 MTR_0649s0020 37.705 305 143 9 71 348 102 386 5.26e-53 179
MsG0180002949.01.T01 MTR_7g055987 46.698 212 96 5 72 274 118 321 1.28e-52 178
MsG0180002949.01.T01 MTR_7g061060 45.318 267 120 10 72 320 111 369 2.01e-52 178
MsG0180002949.01.T01 MTR_7g061050 43.390 295 129 11 72 348 108 382 3.40e-52 177
MsG0180002949.01.T01 MTR_4g030980 38.782 312 136 13 72 349 137 427 5.51e-52 178
MsG0180002949.01.T01 MTR_4g024890 39.216 306 152 8 60 348 95 383 7.53e-52 176
MsG0180002949.01.T01 MTR_5g069760 40.136 294 139 11 72 350 99 370 8.47e-52 176
MsG0180002949.01.T01 MTR_0097s0030 40.377 265 127 8 72 319 108 358 8.61e-52 176
MsG0180002949.01.T01 MTR_2g047240 40.377 265 127 8 72 319 108 358 8.61e-52 176
MsG0180002949.01.T01 MTR_7g066850 40.594 303 135 11 72 348 120 403 9.14e-52 178
MsG0180002949.01.T01 MTR_7g056390 38.961 308 141 11 72 351 130 418 1.13e-51 177
MsG0180002949.01.T01 MTR_3g437520 39.100 289 144 7 72 333 136 419 2.92e-51 177
MsG0180002949.01.T01 MTR_7g445890 38.511 309 146 9 71 348 86 381 4.34e-51 174
MsG0180002949.01.T01 MTR_2g010920 40.836 311 135 11 73 348 127 423 4.66e-51 176
MsG0180002949.01.T01 MTR_4g033495 43.333 270 125 9 71 317 122 386 7.67e-51 175
MsG0180002949.01.T01 MTR_5g068040 41.860 301 132 11 74 350 100 381 9.24e-51 174
MsG0180002949.01.T01 MTR_0128s0020 41.216 296 138 10 72 350 118 394 9.59e-51 174
MsG0180002949.01.T01 MTR_8g066440 40.968 310 126 12 72 350 119 402 7.43e-50 172
MsG0180002949.01.T01 MTR_7g052670 37.500 320 141 11 70 348 122 423 9.20e-50 172
MsG0180002949.01.T01 MTR_0464s0020 38.658 313 147 11 66 348 130 427 9.63e-50 172
MsG0180002949.01.T01 MTR_7g066840 40.656 305 133 13 67 348 117 396 1.11e-49 171
MsG0180002949.01.T01 MTR_6g086920 39.236 288 134 10 72 320 166 451 4.99e-49 172
MsG0180002949.01.T01 MTR_3g072470 38.679 318 149 12 62 351 120 419 7.37e-49 169
MsG0180002949.01.T01 MTR_5g043160 37.785 307 147 11 71 348 165 456 9.17e-49 170
MsG0180002949.01.T01 MTR_7g061010 41.606 274 122 10 90 348 136 386 1.97e-48 167
MsG0180002949.01.T01 MTR_7g070830 37.171 304 130 12 67 320 109 401 2.08e-48 168
MsG0180002949.01.T01 MTR_2g006360 41.634 257 118 6 100 348 129 361 3.65e-48 166
MsG0180002949.01.T01 MTR_7g056710 40.816 294 142 9 67 348 106 379 3.91e-48 167
MsG0180002949.01.T01 MTR_2g047200 36.789 299 148 8 72 351 119 395 6.32e-48 166
MsG0180002949.01.T01 MTR_2g047892 38.667 300 137 12 73 348 119 395 7.04e-48 166
MsG0180002949.01.T01 MTR_7g055953 44.490 245 101 10 122 350 90 315 7.74e-48 164
MsG0180002949.01.T01 MTR_7g066060 37.540 309 151 9 66 348 113 405 7.92e-48 169
MsG0180002949.01.T01 MTR_7g028660 38.284 303 141 9 70 350 101 379 7.98e-48 166
MsG0180002949.01.T01 MTR_7g060960 40.550 291 133 10 70 348 104 366 1.05e-47 165
MsG0180002949.01.T01 MTR_7g091640 47.297 222 88 8 72 268 130 347 1.21e-47 165
MsG0180002949.01.T01 MTR_1g071010 36.700 297 150 8 71 348 108 385 1.30e-47 166
MsG0180002949.01.T01 MTR_0128s0010 39.116 294 148 10 72 348 117 396 1.57e-47 166
MsG0180002949.01.T01 MTR_7g066100 37.324 284 139 8 67 320 100 374 1.61e-47 165
MsG0180002949.01.T01 MTR_4g019990 37.086 302 143 11 72 348 108 387 1.94e-47 165
MsG0180002949.01.T01 MTR_5g096710 38.206 301 152 10 66 348 113 397 1.98e-47 165
MsG0180002949.01.T01 MTR_6g017295 38.966 290 134 11 72 319 41 329 3.16e-47 168
MsG0180002949.01.T01 MTR_7g056570 40.067 297 131 9 72 348 112 381 5.95e-47 165
MsG0180002949.01.T01 MTR_7g056173 43.478 230 101 6 117 320 22 248 9.18e-47 162
MsG0180002949.01.T01 MTR_7g070880 37.710 297 132 12 67 317 109 398 1.04e-46 164
MsG0180002949.01.T01 MTR_7g066080 37.107 318 143 10 72 348 112 413 1.36e-46 164
MsG0180002949.01.T01 MTR_7g066030 36.570 309 147 10 72 350 114 403 1.45e-46 163
MsG0180002949.01.T01 MTR_6g017280 37.584 298 151 10 72 348 103 386 1.10e-45 160
MsG0180002949.01.T01 MTR_0128s0070 38.644 295 146 10 72 350 122 397 4.15e-45 159
MsG0180002949.01.T01 MTR_1g016960 73.214 112 20 2 242 351 154 257 6.81e-45 155
MsG0180002949.01.T01 MTR_1g016960 76.543 81 18 1 101 181 72 151 3.06e-34 127
MsG0180002949.01.T01 MTR_2g437110 37.333 300 133 10 72 348 124 391 1.66e-44 159
MsG0180002949.01.T01 MTR_2g047878 38.567 293 142 13 62 348 102 362 2.65e-44 156
MsG0180002949.01.T01 MTR_4g030090 37.294 303 149 12 72 348 111 398 4.18e-44 156
MsG0180002949.01.T01 MTR_7g050520 37.457 291 149 9 70 348 119 388 9.08e-44 155
MsG0180002949.01.T01 MTR_1g112010 37.113 291 146 8 63 349 67 324 2.12e-43 153
MsG0180002949.01.T01 MTR_7g056820 38.745 271 138 9 65 320 101 358 2.47e-43 154
MsG0180002949.01.T01 MTR_7g056760 35.906 298 154 8 72 348 122 403 4.68e-43 154
MsG0180002949.01.T01 MTR_7g078880 42.678 239 88 8 135 346 95 311 4.83e-43 154
MsG0180002949.01.T01 MTR_7g056797 36.149 296 154 10 72 348 122 401 8.07e-43 153
MsG0180002949.01.T01 MTR_7g050480 37.457 291 149 9 70 348 119 388 9.42e-43 152
MsG0180002949.01.T01 MTR_2g047895 36.396 283 131 10 66 320 31 292 1.70e-42 150
MsG0180002949.01.T01 MTR_4g129160 39.442 251 119 8 71 296 118 360 4.59e-42 150
MsG0180002949.01.T01 MTR_2g010900 38.168 262 130 8 73 307 78 334 4.76e-42 150
MsG0180002949.01.T01 MTR_4g030110 39.636 275 114 10 72 320 130 378 5.86e-42 150
MsG0180002949.01.T01 MTR_7g056260 43.111 225 94 8 62 265 106 317 6.39e-42 149
MsG0180002949.01.T01 MTR_7g066000 36.601 306 147 13 72 350 118 403 1.01e-41 150
MsG0180002949.01.T01 MTR_7g022600 35.385 325 162 10 62 351 112 423 1.58e-41 150
MsG0180002949.01.T01 MTR_7g052150 37.000 300 153 10 66 348 118 398 4.98e-41 148
MsG0180002949.01.T01 MTR_2g461450 39.286 252 134 8 72 313 106 348 6.58e-41 147
MsG0180002949.01.T01 MTR_7g056200 36.877 301 123 10 73 348 122 380 2.74e-39 143
MsG0180002949.01.T01 MTR_7g034310 39.357 249 111 7 113 350 9 228 2.93e-39 139
MsG0180002949.01.T01 MTR_4g030760 35.640 289 141 9 72 348 174 429 3.03e-39 144
MsG0180002949.01.T01 MTR_5g069950 41.436 181 91 3 95 271 34 203 5.25e-39 138
MsG0180002949.01.T01 MTR_6g017270 35.739 291 116 10 72 348 106 339 1.49e-38 140
MsG0180002949.01.T01 MTR_7g035295 34.333 300 138 12 72 348 115 378 2.29e-38 141
MsG0180002949.01.T01 MTR_7g061940 42.424 198 96 6 123 310 78 267 9.18e-37 134
MsG0180002949.01.T01 MTR_2g010935 38.034 234 105 6 127 348 43 248 1.69e-36 132
MsG0180002949.01.T01 MTR_2g060555 38.153 249 106 12 95 320 46 269 2.11e-35 130
MsG0180002949.01.T01 MTR_7g091610 44.737 152 75 1 173 315 72 223 4.56e-35 129
MsG0180002949.01.T01 MTR_7g006360 35.115 262 103 8 93 351 80 277 8.74e-35 129
MsG0180002949.01.T01 MTR_3g013950 34.397 282 149 11 66 320 96 368 3.17e-34 130
MsG0180002949.01.T01 MTR_7g066010 32.686 309 126 13 72 350 114 370 3.41e-34 129
MsG0180002949.01.T01 MTR_6g081280 38.393 224 106 6 117 321 13 223 4.00e-34 126
MsG0180002949.01.T01 MTR_4g037465 36.704 267 132 12 72 313 115 369 5.23e-34 129
MsG0180002949.01.T01 MTR_6g042600 32.042 284 119 6 72 349 109 324 3.55e-33 127
MsG0180002949.01.T01 MTR_0267s0050 34.643 280 149 10 66 320 96 366 7.35e-33 126
MsG0180002949.01.T01 MTR_2g017720 36.564 227 112 8 132 345 89 296 8.12e-33 127
MsG0180002949.01.T01 MTR_4g030790 38.462 221 105 10 72 269 76 288 6.78e-32 122
MsG0180002949.01.T01 MTR_7g070440 33.887 301 152 13 72 349 95 371 1.25e-31 122
MsG0180002949.01.T01 MTR_4g020000 37.500 248 111 11 117 332 108 343 2.40e-31 121
MsG0180002949.01.T01 MTR_7g056170 32.635 334 124 9 72 348 169 458 3.66e-31 122
MsG0180002949.01.T01 MTR_4g006350 31.046 306 157 11 71 348 594 873 7.01e-31 124
MsG0180002949.01.T01 MTR_7g078940 45.055 182 70 8 70 224 151 329 8.65e-31 120
MsG0180002949.01.T01 MTR_2g021150 32.302 291 155 12 68 348 109 367 1.37e-30 120
MsG0180002949.01.T01 MTR_7g058630 39.429 175 89 4 178 348 17 178 1.50e-30 115
MsG0180002949.01.T01 MTR_8g030630 41.477 176 84 4 145 316 280 440 2.00e-30 120
MsG0180002949.01.T01 MTR_8g030630 39.241 158 86 3 173 321 86 242 1.17e-26 110
MsG0180002949.01.T01 MTR_5g011350 39.130 184 93 6 71 244 72 246 6.03e-30 115
MsG0180002949.01.T01 MTR_7g445750 37.209 215 102 5 72 254 118 331 7.50e-30 117
MsG0180002949.01.T01 MTR_7g022670 36.574 216 111 5 146 348 147 349 1.22e-29 117
MsG0180002949.01.T01 MTR_7g056793 34.335 233 105 7 118 348 44 230 9.04e-29 111
MsG0180002949.01.T01 MTR_7g056023 40.196 204 95 8 63 246 81 277 2.63e-28 111
MsG0180002949.01.T01 MTR_1g047490 38.756 209 83 8 72 256 110 297 4.56e-28 112
MsG0180002949.01.T01 MTR_8g101940 33.876 307 145 14 66 349 96 367 1.99e-26 108
MsG0180002949.01.T01 MTR_7g037670 31.023 303 132 11 62 350 94 333 6.84e-26 106
MsG0180002949.01.T01 MTR_2g027820 36.410 195 99 5 167 348 117 299 3.01e-25 103
MsG0180002949.01.T01 MTR_2g021190 34.848 264 132 13 72 320 116 354 3.13e-25 105
MsG0180002949.01.T01 MTR_7g030040 32.746 284 119 9 71 351 124 338 3.55e-25 104
MsG0180002949.01.T01 MTR_3g464640 60.000 65 26 0 5 69 54 118 4.49e-25 99.8
MsG0180002949.01.T01 MTR_0128s0110 36.932 176 90 8 154 313 9 179 5.47e-25 100
MsG0180002949.01.T01 MTR_5g022420 30.328 244 142 9 72 309 120 341 2.27e-24 102
MsG0180002949.01.T01 MTR_1g097560 30.932 236 130 9 67 296 124 332 4.39e-23 99.4
MsG0180002949.01.T01 MTR_0044s0300 30.548 347 193 14 11 348 81 388 1.17e-22 98.2
MsG0180002949.01.T01 MTR_2g046920 30.859 256 151 10 67 314 114 351 1.87e-22 97.4
MsG0180002949.01.T01 MTR_6g007135 31.461 267 159 14 66 320 118 372 5.82e-22 96.3
MsG0180002949.01.T01 MTR_1g050542 30.208 288 168 11 71 351 145 406 5.87e-22 96.3
MsG0180002949.01.T01 MTR_7g089830 42.857 147 60 5 173 309 9 141 6.64e-22 90.9
MsG0180002949.01.T01 MTR_3g011020 33.488 215 113 9 122 320 157 357 1.09e-21 95.1
MsG0180002949.01.T01 MTR_3g055000 37.086 151 68 3 199 348 1 125 1.26e-21 89.4
MsG0180002949.01.T01 MTR_1g097330 29.545 264 156 11 71 323 106 350 1.73e-21 95.1
MsG0180002949.01.T01 MTR_5g080210 55.882 68 30 0 5 72 70 137 3.01e-21 90.1
MsG0180002949.01.T01 MTR_2g029990 31.783 258 144 13 72 319 148 383 4.40e-21 94.0
MsG0180002949.01.T01 MTR_7g070900 36.181 199 66 8 119 293 234 395 4.43e-21 94.4
MsG0180002949.01.T01 MTR_5g054960 39.535 129 58 2 5 133 14 122 5.76e-21 88.2
MsG0180002949.01.T01 MTR_5g046300 33.163 196 116 8 75 265 100 285 8.22e-21 92.4
MsG0180002949.01.T01 MTR_5g046290 33.163 196 116 8 75 265 100 285 8.22e-21 92.4
MsG0180002949.01.T01 MTR_3g030350 36.318 201 108 8 73 265 130 318 1.12e-20 92.4
MsG0180002949.01.T01 MTR_5g046280 32.653 196 117 8 75 265 3 188 1.16e-20 90.1
MsG0180002949.01.T01 MTR_7g102890 58.462 65 27 0 5 69 146 210 1.27e-20 90.5
MsG0180002949.01.T01 MTR_3g007330 31.061 264 140 13 69 313 132 372 2.49e-20 91.7
MsG0180002949.01.T01 MTR_7g013590 29.966 297 168 14 72 348 126 402 3.03e-20 91.3
MsG0180002949.01.T01 MTR_8g037820 52.308 65 31 0 5 69 63 127 3.99e-20 87.0
MsG0180002949.01.T01 MTR_2g078900 36.019 211 114 10 98 304 153 346 1.13e-19 89.4
MsG0180002949.01.T01 MTR_3g036335 30.822 292 147 16 73 348 141 393 1.46e-19 89.4
MsG0180002949.01.T01 MTR_5g011200 32.020 203 115 8 72 263 115 305 1.86e-19 89.0
MsG0180002949.01.T01 MTR_3g055070 38.655 119 56 2 199 316 1 103 2.13e-19 84.3
MsG0180002949.01.T01 MTR_6g065980 30.980 255 144 11 73 320 109 338 2.62e-19 88.2
MsG0180002949.01.T01 MTR_1g094210 29.845 258 150 10 72 323 152 384 2.76e-19 88.6
MsG0180002949.01.T01 MTR_1g094210 33.168 202 112 8 72 267 152 336 4.53e-19 88.2
MsG0180002949.01.T01 MTR_7g062070 38.400 125 72 3 203 324 76 198 4.84e-19 84.7
MsG0180002949.01.T01 MTR_5g038480 61.404 57 22 0 5 61 87 143 6.04e-19 82.8
MsG0180002949.01.T01 MTR_3g009300 31.034 261 146 13 73 319 98 338 6.18e-19 87.0
MsG0180002949.01.T01 MTR_4g061240 52.308 65 31 0 5 69 91 155 6.24e-19 84.3
MsG0180002949.01.T01 MTR_4g061340 30.973 226 119 10 68 271 113 323 6.43e-19 87.4
MsG0180002949.01.T01 MTR_7g407070 33.482 224 110 11 69 266 130 340 1.14e-18 86.7
MsG0180002949.01.T01 MTR_2g021155 35.676 185 95 10 98 265 711 888 1.31e-18 87.8
MsG0180002949.01.T01 MTR_2g021155 29.134 254 146 10 72 312 128 360 6.39e-17 82.8
MsG0180002949.01.T01 MTR_3g030320 32.338 201 113 8 73 265 44 229 1.63e-18 85.1
MsG0180002949.01.T01 MTR_3g009240 32.075 265 139 12 73 319 127 368 1.78e-18 86.3
MsG0180002949.01.T01 MTR_2g078870 35.398 226 113 13 98 312 78 281 3.24e-18 84.3
MsG0180002949.01.T01 MTR_1g055375 31.120 241 129 12 72 297 105 323 4.20e-18 84.7
MsG0180002949.01.T01 MTR_2g040320 63.462 52 19 0 18 69 6 57 7.27e-18 79.0
MsG0180002949.01.T01 MTR_7g066040 36.416 173 73 7 72 209 25 195 8.33e-18 82.0
MsG0180002949.01.T01 MTR_1g046600 60.000 70 26 1 242 309 237 306 1.33e-17 82.8
MsG0180002949.01.T01 MTR_1g046600 40.777 103 45 4 72 158 150 252 1.22e-12 68.2
MsG0180002949.01.T01 MTR_1g054575 31.111 225 137 8 72 291 143 354 1.62e-17 84.3
MsG0180002949.01.T01 MTR_4g108820 32.895 228 116 12 58 271 92 296 1.86e-17 82.4
MsG0180002949.01.T01 MTR_7g445580 38.182 110 62 2 208 317 42 145 2.76e-17 78.2
MsG0180002949.01.T01 MTR_2g046860 28.185 259 159 10 67 314 2 244 3.18e-17 81.6
MsG0180002949.01.T01 MTR_3g006570 33.824 204 108 11 75 265 118 307 3.31e-17 82.4
MsG0180002949.01.T01 MTR_1g115160 28.571 287 161 13 73 351 118 368 3.33e-17 82.4
MsG0180002949.01.T01 MTR_1g054725 31.628 215 109 12 72 265 115 312 3.98e-17 82.0
MsG0180002949.01.T01 MTR_2g104350 47.692 65 34 0 5 69 127 191 5.08e-17 79.7
MsG0180002949.01.T01 MTR_3g031290 52.308 65 31 0 5 69 167 231 6.18e-17 80.5
MsG0180002949.01.T01 MTR_7g070937 40.602 133 52 5 120 227 10 140 7.32e-17 77.8
MsG0180002949.01.T01 MTR_7g021580 31.250 224 82 7 95 318 132 283 8.17e-17 80.1
MsG0180002949.01.T01 MTR_8g101580 25.267 281 153 11 67 323 133 380 8.77e-17 81.3
MsG0180002949.01.T01 MTR_3g036290 32.701 211 103 11 66 264 111 294 1.01e-16 80.9
MsG0180002949.01.T01 MTR_4g031770 31.349 252 132 13 72 302 98 329 1.10e-16 80.9
MsG0180002949.01.T01 MTR_3g010390 28.679 265 155 11 73 319 135 383 1.28e-16 80.9
MsG0180002949.01.T01 MTR_7g066830 47.872 94 41 4 72 165 95 180 1.35e-16 77.4
MsG0180002949.01.T01 MTR_6g053240 28.689 244 149 11 72 304 125 354 1.58e-16 80.5
MsG0180002949.01.T01 MTR_7g007300 28.772 285 154 11 71 348 202 444 1.82e-16 80.5
MsG0180002949.01.T01 MTR_2g047832 26.937 271 162 8 67 314 119 376 2.09e-16 80.1
MsG0180002949.01.T01 MTR_3g036430 29.167 288 152 14 73 348 94 341 2.93e-16 79.3
MsG0180002949.01.T01 MTR_1g097490 28.244 262 145 11 72 320 142 373 3.08e-16 79.7
MsG0180002949.01.T01 MTR_6g053260 28.279 244 145 12 72 304 434 658 3.14e-16 80.5
MsG0180002949.01.T01 MTR_6g004660 28.889 270 160 13 72 327 117 368 3.51e-16 79.3
MsG0180002949.01.T01 MTR_3g009260 34.328 201 113 8 73 265 131 320 4.18e-16 79.0
MsG0180002949.01.T01 MTR_2g435950 28.235 255 145 12 72 313 46 275 4.33e-16 78.2
MsG0180002949.01.T01 MTR_3g009310 28.571 266 159 12 66 320 132 377 5.11e-16 79.0
MsG0180002949.01.T01 MTR_8g467140 29.302 215 122 9 72 271 126 325 5.38e-16 78.2
MsG0180002949.01.T01 MTR_2g046900 28.679 265 153 10 67 314 118 363 6.08e-16 78.6
MsG0180002949.01.T01 MTR_2g046830 27.165 254 163 9 67 314 115 352 6.61e-16 78.6
MsG0180002949.01.T01 MTR_2g055970 28.839 267 150 14 72 323 305 546 6.68e-16 79.3
MsG0180002949.01.T01 MTR_6g048150 50.000 82 29 3 245 319 13 89 1.07e-15 73.6
MsG0180002949.01.T01 MTR_3g013740 30.332 211 117 9 73 266 148 345 1.08e-15 78.2
MsG0180002949.01.T01 MTR_6g048140 31.602 231 135 12 74 299 145 357 1.13e-15 77.8
MsG0180002949.01.T01 MTR_4g122170 54.237 59 27 0 5 63 42 100 1.31e-15 74.3
MsG0180002949.01.T01 MTR_7g061100 43.624 149 58 7 72 208 86 220 1.73e-15 76.6
MsG0180002949.01.T01 MTR_3g069400 45.833 72 39 0 1 72 17 88 1.89e-15 71.2
MsG0180002949.01.T01 MTR_3g007410 29.368 269 152 12 69 319 140 388 2.11e-15 77.0
MsG0180002949.01.T01 MTR_0354s0030 40.566 106 48 3 248 349 1 95 2.59e-15 71.2
MsG0180002949.01.T01 MTR_2g046800 26.459 257 161 8 67 316 135 370 3.23e-15 76.6
MsG0180002949.01.T01 MTR_7g058660 41.489 94 50 1 232 320 103 196 3.31e-15 74.3
MsG0180002949.01.T01 MTR_4g024870 33.659 205 103 8 28 208 101 296 4.13e-15 76.3
MsG0180002949.01.T01 MTR_6g027910 33.632 223 98 12 71 263 108 310 6.42e-15 75.5
MsG0180002949.01.T01 MTR_8g062660 28.315 279 135 13 74 320 118 363 1.03e-14 75.9
MsG0180002949.01.T01 MTR_3g006500 29.825 228 132 9 98 319 145 350 1.48e-14 74.3
MsG0180002949.01.T01 MTR_3g030240 35.616 146 76 6 120 264 181 309 1.77e-14 74.3
MsG0180002949.01.T01 MTR_1g100763 29.707 239 111 12 65 297 93 280 1.80e-14 73.6
MsG0180002949.01.T01 MTR_3g010920 28.462 260 139 13 71 319 139 362 1.86e-14 74.3
MsG0180002949.01.T01 MTR_4g053470 30.769 182 89 5 132 301 145 301 2.10e-14 73.6
MsG0180002949.01.T01 MTR_3g017430 60.870 46 18 0 5 50 32 77 2.30e-14 68.9
MsG0180002949.01.T01 MTR_6g027890 35.789 190 88 11 122 296 113 283 2.52e-14 73.2
MsG0180002949.01.T01 MTR_2g025960 27.273 253 145 10 71 297 2 241 3.17e-14 72.8
MsG0180002949.01.T01 MTR_3g010590 31.169 231 129 12 98 319 157 366 3.19e-14 73.6
MsG0180002949.01.T01 MTR_6g021880 28.912 294 160 17 72 348 119 380 3.30e-14 73.6
MsG0180002949.01.T01 MTR_3g083640 29.885 261 135 13 75 320 157 384 4.86e-14 73.2
MsG0180002949.01.T01 MTR_2g028130 27.027 259 154 10 71 304 103 351 7.26e-14 72.4
MsG0180002949.01.T01 MTR_4g024910 36.066 122 73 3 200 320 130 247 7.96e-14 72.0
MsG0180002949.01.T01 MTR_3g006670 29.858 211 115 12 72 265 144 338 8.64e-14 72.4
MsG0180002949.01.T01 MTR_3g030250 29.119 261 131 14 75 319 138 360 1.06e-13 72.0
MsG0180002949.01.T01 MTR_1g068835 28.037 214 125 9 71 264 88 292 1.06e-13 72.0
MsG0180002949.01.T01 MTR_1g046260 34.343 99 62 2 5 102 81 177 1.11e-13 69.3
MsG0180002949.01.T01 MTR_7g056723 42.241 116 59 6 72 182 36 148 1.23e-13 68.6
MsG0180002949.01.T01 MTR_1g113900 32.906 234 116 15 127 351 46 247 1.38e-13 70.1
MsG0180002949.01.T01 MTR_6g014720 29.204 226 141 9 46 263 86 300 1.79e-13 71.2
MsG0180002949.01.T01 MTR_4g133170 25.100 251 146 11 72 300 88 318 2.24e-13 70.9
MsG0180002949.01.T01 MTR_3g007430 30.698 215 120 11 69 266 129 331 2.34e-13 70.9
MsG0180002949.01.T01 MTR_5g057710 29.208 202 124 9 73 265 141 332 2.48e-13 70.9
MsG0180002949.01.T01 MTR_3g006640 26.991 226 114 10 73 267 19 224 4.40e-13 69.3
MsG0180002949.01.T01 MTR_5g046260 28.889 225 111 10 69 282 91 277 4.74e-13 69.3
MsG0180002949.01.T01 MTR_7g103360 53.704 54 25 0 15 68 342 395 9.23e-13 69.3
MsG0180002949.01.T01 MTR_3g083010 25.670 261 152 13 67 298 101 348 9.37e-13 69.3
MsG0180002949.01.T01 MTR_0014s0110 59.574 47 19 0 16 62 40 86 9.66e-13 65.9
MsG0180002949.01.T01 MTR_5g054985 36.735 98 61 1 5 102 14 110 9.95e-13 65.1
MsG0180002949.01.T01 MTR_1g097510 30.337 178 100 10 143 309 80 244 1.05e-12 68.2
MsG0180002949.01.T01 MTR_4g054990 39.241 79 48 0 8 86 52 130 1.06e-12 65.9
MsG0180002949.01.T01 MTR_2g025420 25.818 275 159 11 58 300 90 351 1.21e-12 68.9
MsG0180002949.01.T01 MTR_2g426090 25.965 285 171 12 64 322 90 360 1.28e-12 68.9
MsG0180002949.01.T01 MTR_3g006530 27.931 290 156 16 73 348 145 395 1.53e-12 68.6
MsG0180002949.01.T01 MTR_6g013270 27.350 234 142 10 71 296 130 343 1.68e-12 68.6
MsG0180002949.01.T01 MTR_2g021210 30.233 258 152 12 72 324 176 410 2.04e-12 68.2
MsG0180002949.01.T01 MTR_3g007300 30.542 203 103 9 72 265 131 304 2.06e-12 67.8
MsG0180002949.01.T01 MTR_3g010870 29.114 237 132 12 98 319 150 365 3.10e-12 67.4
MsG0180002949.01.T01 MTR_3g052690 42.647 68 39 0 5 72 34 101 4.01e-12 63.9
MsG0180002949.01.T01 MTR_4g070550 26.697 221 129 11 72 263 99 315 5.59e-12 66.6
MsG0180002949.01.T01 MTR_1g055055 28.261 230 127 12 71 297 125 319 7.61e-12 66.2
MsG0180002949.01.T01 MTR_7g050490 42.391 92 45 3 70 161 105 188 1.07e-11 63.5
MsG0180002949.01.T01 MTR_4g028380 46.032 63 34 0 5 67 135 197 1.43e-11 63.5
MsG0180002949.01.T01 MTR_2g028160 28.244 262 145 16 73 304 105 353 1.54e-11 65.5
MsG0180002949.01.T01 MTR_4g051010 49.153 59 30 0 3 61 190 248 1.66e-11 63.9
MsG0180002949.01.T01 MTR_1g055065 30.631 222 112 13 73 267 19 225 1.81e-11 64.3
MsG0180002949.01.T01 MTR_4g006840 34.899 149 62 6 71 206 91 217 1.83e-11 63.5
MsG0180002949.01.T01 MTR_2g031680 23.050 282 172 11 66 323 83 343 2.17e-11 65.1
MsG0180002949.01.T01 MTR_2g028140 25.792 221 131 10 72 263 105 321 2.85e-11 64.7
MsG0180002949.01.T01 MTR_2g021050 25.503 298 176 13 69 349 90 358 2.94e-11 64.7
MsG0180002949.01.T01 MTR_6g072090 41.667 60 35 0 5 64 45 104 3.12e-11 60.1
MsG0180002949.01.T01 MTR_2g095160 40.000 65 39 0 5 69 62 126 3.17e-11 62.0
MsG0180002949.01.T01 MTR_5g053460 38.462 65 40 0 5 69 103 167 5.07e-11 61.6
MsG0180002949.01.T01 MTR_1g068860 25.346 217 129 8 71 264 88 294 5.70e-11 63.5
MsG0180002949.01.T01 MTR_8g099460 24.739 287 174 13 2 263 32 301 8.12e-11 63.2
MsG0180002949.01.T01 MTR_8g030660 33.108 148 58 4 72 179 121 267 8.21e-11 62.4
MsG0180002949.01.T01 MTR_8g054320 29.949 197 118 9 76 265 56 239 8.32e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 71 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATGGAAAATGAAGGAATT+TGG 0.167910 1:+53674029 MsG0180002949.01.T01:CDS
AATCCTTTCTTCAACTTATA+TGG 0.195948 1:+53669795 MsG0180002949.01.T01:CDS
AAATGGTCATCAATATTAAA+AGG 0.197166 1:-53669731 None:intergenic
TATGGAAAATGAAGGAATTT+GGG 0.219900 1:+53674030 MsG0180002949.01.T01:CDS
AACTAGTGCTAATGCATATT+GGG 0.260109 1:+53674286 MsG0180002949.01.T01:CDS
AATTTGGGGTTGATGATTCT+TGG 0.275914 1:+53674045 MsG0180002949.01.T01:CDS
CGCCACCACTTTATAAGTTT+CGG 0.292195 1:-53673685 None:intergenic
TGCTATTGTTTCACTTGATC+TGG 0.317931 1:+53673878 MsG0180002949.01.T01:CDS
TAGAGAACTGGCTCCGTGTT+TGG 0.319343 1:+53673571 MsG0180002949.01.T01:CDS
GAACTAGTGCTAATGCATAT+TGG 0.320073 1:+53674285 MsG0180002949.01.T01:CDS
TACTTTGTGTCTGGTTGGTT+TGG 0.326359 1:+53669819 MsG0180002949.01.T01:CDS
TTGGATGCAGTCTTGGTGGC+TGG 0.332491 1:-53673597 None:intergenic
CCCAAACAATTCTCTATAAC+AGG 0.333756 1:+53674204 MsG0180002949.01.T01:CDS
TAATGGCACCAACTGAAAAT+AGG 0.345212 1:-53674132 None:intergenic
GTTGGTGCCATTATTTCTTT+CGG 0.365746 1:+53674142 MsG0180002949.01.T01:CDS
TTATATGGTTACTTTGTGTC+TGG 0.380987 1:+53669810 MsG0180002949.01.T01:CDS
GGAATAGTTGGTTCCTGTAA+TGG 0.382128 1:+53673507 MsG0180002949.01.T01:CDS
ACTTGGGTGGTGATGATGTT+TGG 0.382252 1:+53673748 MsG0180002949.01.T01:CDS
ACACCAATAGTTGGCGAGTT+AGG 0.383207 1:-53673954 None:intergenic
CCATCCTCCGAAAGAAATAA+TGG 0.387556 1:-53674149 None:intergenic
CAAACGAAGCAATCCATTAC+AGG 0.387697 1:-53673520 None:intergenic
CTGCCTAACTCGCCAACTAT+TGG 0.391185 1:+53673951 MsG0180002949.01.T01:CDS
AGTGAATAAACTGAAATAAA+TGG 0.394864 1:-53669748 None:intergenic
TCCTGTTATAGAGAATTGTT+TGG 0.398167 1:-53674205 None:intergenic
CTGTAATGGATTGCTTCGTT+TGG 0.411988 1:+53673521 MsG0180002949.01.T01:CDS
CCTGTTATAGAGAATTGTTT+GGG 0.420346 1:-53674204 None:intergenic
TGGATGCAGTCTTGGTGGCT+GGG 0.426253 1:-53673596 None:intergenic
CCATTATTTCTTTCGGAGGA+TGG 0.430390 1:+53674149 MsG0180002949.01.T01:CDS
GTACATTGTGGCATCATATC+AGG 0.430588 1:+53669681 MsG0180002949.01.T01:CDS
TTTCAGTTTATTCACTCTAC+AGG 0.438364 1:+53669755 MsG0180002949.01.T01:CDS
TGCATATTGGGGCTATGAGT+TGG 0.446182 1:+53674298 MsG0180002949.01.T01:CDS
GTTGTCAAGATTTAGAGAAC+TGG 0.446527 1:+53673559 MsG0180002949.01.T01:CDS
TCGCCAACTATTGGTGTGCT+TGG 0.455768 1:+53673960 MsG0180002949.01.T01:CDS
TGTTTGTGGCCAAGAACAAC+AGG 0.461527 1:-53673789 None:intergenic
TTGAACAACCAAGGAAGTAC+TGG 0.461664 1:+53673486 MsG0180002949.01.T01:intron
CCAACTATTGGTGTGCTTGG+AGG 0.472120 1:+53673963 MsG0180002949.01.T01:CDS
ATGGTTACTTTGTGTCTGGT+TGG 0.478058 1:+53669814 MsG0180002949.01.T01:CDS
CACTCAAATACACATGTTTG+TGG 0.479857 1:-53673803 None:intergenic
TGTGGCATCATATCAGGTCT+TGG 0.483368 1:+53669687 MsG0180002949.01.T01:CDS
CAAGGAAGTACTGGAATAGT+TGG 0.484892 1:+53673495 MsG0180002949.01.T01:intron
TTCGGAGGATGGTGATTCAC+TGG 0.485151 1:+53674160 MsG0180002949.01.T01:CDS
AGGTCTTGGATCGGAATGTC+AGG 0.486507 1:+53669701 MsG0180002949.01.T01:CDS
TAACCATATAAGTTGAAGAA+AGG 0.506119 1:-53669798 None:intergenic
AATGGTCATCAATATTAAAA+GGG 0.507085 1:-53669730 None:intergenic
ATTTGAGTGGCACTATGAAC+TGG 0.515195 1:+53673817 MsG0180002949.01.T01:CDS
CCTCCAAGCACACCAATAGT+TGG 0.521241 1:-53673963 None:intergenic
GGTTGAATTATCACATCCAA+AGG 0.526466 1:-53673664 None:intergenic
TTCAACCGAAACTTATAAAG+TGG 0.533941 1:+53673680 MsG0180002949.01.T01:CDS
CATAATCTATTAGAAGATCA+TGG 0.536762 1:-53674091 None:intergenic
ATGGAAAATGAAGGAATTTG+GGG 0.556693 1:+53674031 MsG0180002949.01.T01:CDS
TGTTTCACTTGATCTGGAGA+CGG 0.564683 1:+53673884 MsG0180002949.01.T01:CDS
TGGTGGCTGGGTTCCAAACA+CGG 0.568279 1:-53673584 None:intergenic
GGTGCCATTATTTCTTTCGG+AGG 0.575290 1:+53674145 MsG0180002949.01.T01:CDS
ATGCCACAATGTACTGAAAG+TGG 0.584228 1:-53669672 None:intergenic
TGGGTGGTGATGATGTTTGG+AGG 0.592106 1:+53673751 MsG0180002949.01.T01:CDS
TTCACTTGATCTGGAGACGG+AGG 0.611349 1:+53673887 MsG0180002949.01.T01:CDS
ACTAGTGCTAATGCATATTG+GGG 0.613855 1:+53674287 MsG0180002949.01.T01:CDS
GTGCCACTTTCAGTACATTG+TGG 0.613922 1:+53669669 MsG0180002949.01.T01:CDS
GGAGGTCAGAGTTCTCAACT+TGG 0.616156 1:+53673731 MsG0180002949.01.T01:CDS
AACCGAAACTTATAAAGTGG+TGG 0.627190 1:+53673683 MsG0180002949.01.T01:CDS
CATCATATCAGGTCTTGGAT+CGG 0.629063 1:+53669692 MsG0180002949.01.T01:CDS
GTCAGAGTTCTCAACTTGGG+TGG 0.635619 1:+53673735 MsG0180002949.01.T01:CDS
GAGGTCAGAGTTCTCAACTT+GGG 0.637633 1:+53673732 MsG0180002949.01.T01:CDS
CACAAACATGTGTATTTGAG+TGG 0.641282 1:+53673804 MsG0180002949.01.T01:CDS
TATTCACAACAGTGATACTG+TGG 0.650586 1:+53673848 MsG0180002949.01.T01:CDS
GAGTGGCACTATGAACTGGT+TGG 0.657264 1:+53673821 MsG0180002949.01.T01:CDS
AATCAATACACTGTTCCTTG+TGG 0.661217 1:+53673915 MsG0180002949.01.T01:CDS
TCACTCTACAGGTCACTCGA+AGG 0.670568 1:+53669766 MsG0180002949.01.T01:CDS
AGCACTTCATCAACACCACA+AGG 0.684792 1:-53673930 None:intergenic
TAATCGAGAGACAACATCGG+AGG 0.711322 1:+53673713 MsG0180002949.01.T01:CDS
TTGTAATCGAGAGACAACAT+CGG 0.766267 1:+53673710 MsG0180002949.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAACAAAATTAAAATG+GGG - Chr1:53671415-53671434 None:intergenic 10.0%
!!! AAGTTTTAAATATGATTAAA+TGG - Chr1:53671453-53671472 None:intergenic 10.0%
!!! CTATTGATTTTAAAATTTTA+AGG - Chr1:53672751-53672770 None:intergenic 10.0%
!!! TTAAAATTTTAAGGATTTTA+TGG - Chr1:53672742-53672761 None:intergenic 10.0%
!!! TTTAAATAATTTTTTTTTGG+TGG - Chr1:53671482-53671501 None:intergenic 10.0%
!! TAACAAATAAAAAATGTGTA+TGG + Chr1:53672667-53672686 MsG0180002949.01.T01:intron 15.0%
!!! AATGACTTTAAAATCTAAAT+AGG - Chr1:53670877-53670896 None:intergenic 15.0%
!!! ATGGATTTTATAAGATTTTA+AGG - Chr1:53672723-53672742 None:intergenic 15.0%
!!! ATGGGATTTTAAAATTTTAA+AGG - Chr1:53672891-53672910 None:intergenic 15.0%
!!! CAATCGTTATTTTAATTTTT+AGG + Chr1:53671281-53671300 MsG0180002949.01.T01:intron 15.0%
!!! TGGATTTTATAAGATTTTAA+GGG - Chr1:53672722-53672741 None:intergenic 15.0%
!!! TTTAATAAATTGGATTTTGA+TGG + Chr1:53672295-53672314 MsG0180002949.01.T01:intron 15.0%
!!! TTTGTTTTTAAAATTTATGG+CGG - Chr1:53670850-53670869 None:intergenic 15.0%
!!! TTTTTTGAAATTTGCTTTTT+TGG - Chr1:53671344-53671363 None:intergenic 15.0%
!!! TTTTTTTGAAAGATTTGTAA+GGG + Chr1:53672594-53672613 MsG0180002949.01.T01:intron 15.0%
!!! TTTTTTTTGAAAGATTTGTA+AGG + Chr1:53672593-53672612 MsG0180002949.01.T01:intron 15.0%
!! AAATGGTCATCAATATTAAA+AGG - Chr1:53669734-53669753 None:intergenic 20.0%
!! AATGGTCATCAATATTAAAA+GGG - Chr1:53669733-53669752 None:intergenic 20.0%
!! AGTGAATAAACTGAAATAAA+TGG - Chr1:53669751-53669770 None:intergenic 20.0%
!! ATAAAAAGATGAGATTTCTT+GGG + Chr1:53672364-53672383 MsG0180002949.01.T01:intron 20.0%
!! ATTAGATGACCATATATATA+TGG + Chr1:53670391-53670410 MsG0180002949.01.T01:intron 20.0%
!! TAATTTCAAACACAAAATGA+GGG + Chr1:53672556-53672575 MsG0180002949.01.T01:intron 20.0%
!! TAGAGATCAATTTAAGAATA+TGG + Chr1:53671628-53671647 MsG0180002949.01.T01:intron 20.0%
!! TATGGTCATCTAATTAAATT+TGG - Chr1:53670385-53670404 None:intergenic 20.0%
!! TTAATTATGAAAAAGTCTTG+TGG + Chr1:53672115-53672134 MsG0180002949.01.T01:intron 20.0%
!!! AAAGGATTCAATGAATTTTA+GGG - Chr1:53672873-53672892 None:intergenic 20.0%
!!! AGTTTTAACTATTTAAGATC+CGG + Chr1:53671751-53671770 MsG0180002949.01.T01:intron 20.0%
!!! ATATGTACAATTGAATTTTG+TGG + Chr1:53672632-53672651 MsG0180002949.01.T01:intron 20.0%
!!! TAAAGGATTCAATGAATTTT+AGG - Chr1:53672874-53672893 None:intergenic 20.0%
!!! TATGTACAATTGAATTTTGT+GGG + Chr1:53672633-53672652 MsG0180002949.01.T01:intron 20.0%
!!! TATGTTTTGATTTTCATTAC+CGG - Chr1:53670167-53670186 None:intergenic 20.0%
!!! TTATACACTCAAGATTTTAA+TGG - Chr1:53672952-53672971 None:intergenic 20.0%
!!! TTTTGTTATATGGAAAATGA+AGG + Chr1:53674022-53674041 MsG0180002949.01.T01:CDS 20.0%
! AAATCTCTTGAAAAGAATCA+AGG - Chr1:53671392-53671411 None:intergenic 25.0%
! AAGATCATATGAAAGAAACA+TGG - Chr1:53670968-53670987 None:intergenic 25.0%
! AATCCTTTCTTCAACTTATA+TGG + Chr1:53669795-53669814 MsG0180002949.01.T01:CDS 25.0%
! AATCTCTTGAAAAGAATCAA+GGG - Chr1:53671391-53671410 None:intergenic 25.0%
! AGTCTATCAATTTGAGAATT+TGG + Chr1:53671684-53671703 MsG0180002949.01.T01:intron 25.0%
! ATAAGTGAATCATCTTTCAT+TGG + Chr1:53670563-53670582 MsG0180002949.01.T01:intron 25.0%
! ATACAGGATCCATATATATA+TGG - Chr1:53670403-53670422 None:intergenic 25.0%
! ATATGGAAAATGAAGGAATT+TGG + Chr1:53674029-53674048 MsG0180002949.01.T01:CDS 25.0%
! ATCACTTAAAAAAAGTCTCA+TGG + Chr1:53672241-53672260 MsG0180002949.01.T01:intron 25.0%
! ATCCAAATCAAGTAAATTGA+AGG + Chr1:53670326-53670345 MsG0180002949.01.T01:intron 25.0%
! ATGGTAGAAATTAACCAATT+TGG + Chr1:53671647-53671666 MsG0180002949.01.T01:intron 25.0%
! CAAAACTTCTTTCTTTCTAA+TGG - Chr1:53670212-53670231 None:intergenic 25.0%
! CAAAATCATTCAAATTTCGA+AGG + Chr1:53672268-53672287 MsG0180002949.01.T01:intron 25.0%
! CATAAAAAGATGAGATTTCT+TGG + Chr1:53672363-53672382 MsG0180002949.01.T01:intron 25.0%
! CATAATCTATTAGAAGATCA+TGG - Chr1:53674094-53674113 None:intergenic 25.0%
! CGAAGGATTGTTTAATAAAT+TGG + Chr1:53672285-53672304 MsG0180002949.01.T01:intron 25.0%
! CGATACTCAAACATAATAAA+GGG - Chr1:53669985-53670004 None:intergenic 25.0%
! CTAACTCTAATAACTCAAAT+TGG - Chr1:53671611-53671630 None:intergenic 25.0%
! CTAATTAAATTTGGAAGCTT+AGG - Chr1:53670376-53670395 None:intergenic 25.0%
! CTAATTTCAAACACAAAATG+AGG + Chr1:53672555-53672574 MsG0180002949.01.T01:intron 25.0%
! GAAAAGTCAAAGACTATTTA+GGG + Chr1:53671210-53671229 MsG0180002949.01.T01:intron 25.0%
! GAACAAAGAATAACATTAGA+TGG + Chr1:53670527-53670546 MsG0180002949.01.T01:intron 25.0%
! GTTGTTCAAATGATGATAAT+GGG - Chr1:53673475-53673494 None:intergenic 25.0%
! TATGGAAAATGAAGGAATTT+GGG + Chr1:53674030-53674049 MsG0180002949.01.T01:CDS 25.0%
! TCGATACTCAAACATAATAA+AGG - Chr1:53669986-53670005 None:intergenic 25.0%
! TGAAAAATATTCTCCACATT+GGG - Chr1:53671792-53671811 None:intergenic 25.0%
! TGTGCAAATAAGAAAAACAA+AGG - Chr1:53673992-53674011 None:intergenic 25.0%
! TTGAGATTGGAATTTAGATT+TGG - Chr1:53670735-53670754 None:intergenic 25.0%
!! AAAAATTTTCACTTTGCCTT+TGG + Chr1:53673648-53673667 MsG0180002949.01.T01:CDS 25.0%
!! AAGGATTTCAAAGGATTTTA+TGG - Chr1:53672910-53672929 None:intergenic 25.0%
!! AATGTGGAGAATATTTTTCA+GGG + Chr1:53671792-53671811 MsG0180002949.01.T01:intron 25.0%
!! AGATATTGATAGTTGATTAG+TGG + Chr1:53671907-53671926 MsG0180002949.01.T01:intron 25.0%
!! AGGATTTCAAAGGATTTTAT+GGG - Chr1:53672909-53672928 None:intergenic 25.0%
!! ATAATGGGAATCGTAAAAAA+CGG - Chr1:53673460-53673479 None:intergenic 25.0%
!! CTCACACAAAGTTTTTAAAT+GGG - Chr1:53671935-53671954 None:intergenic 25.0%
!! GATATTGATAGTTGATTAGT+GGG + Chr1:53671908-53671927 MsG0180002949.01.T01:intron 25.0%
!! TAACCATATAAGTTGAAGAA+AGG - Chr1:53669801-53669820 None:intergenic 25.0%
!! TCTCACACAAAGTTTTTAAA+TGG - Chr1:53671936-53671955 None:intergenic 25.0%
!! TGAAGGTTTCTTTATTTGTT+TGG - Chr1:53670610-53670629 None:intergenic 25.0%
!! TTATCATATGTTGTCTTTTG+TGG - Chr1:53670687-53670706 None:intergenic 25.0%
!! TTTAAAACAACCAATAGAGT+CGG + Chr1:53671552-53671571 MsG0180002949.01.T01:intron 25.0%
!!! AAGTTTAATTTCACTCCTTT+TGG + Chr1:53669903-53669922 MsG0180002949.01.T01:intron 25.0%
!!! ATAGAGTTTGGTTTGAAAAA+TGG - Chr1:53671008-53671027 None:intergenic 25.0%
!!! ATTTATCACACTGACTTTTA+AGG - Chr1:53672929-53672948 None:intergenic 25.0%
!!! GTCATTTTAAAAAAGTCTTG+AGG + Chr1:53672199-53672218 MsG0180002949.01.T01:intron 25.0%
!!! TCTAACATTTTTTTGCAAGA+AGG - Chr1:53670770-53670789 None:intergenic 25.0%
!!! TTGTTTTTCTTATTTGCACA+GGG + Chr1:53673992-53674011 MsG0180002949.01.T01:CDS 25.0%
!!! TTTGTTTTTCTTATTTGCAC+AGG + Chr1:53673991-53674010 MsG0180002949.01.T01:CDS 25.0%
AAAAATATTCTCCACATTGG+GGG - Chr1:53671790-53671809 None:intergenic 30.0%
AAAAGTTGGATCGGAAATTA+GGG - Chr1:53673272-53673291 None:intergenic 30.0%
AAAGATGATTCACTTATGCA+TGG - Chr1:53670560-53670579 None:intergenic 30.0%
AAATGAGTAAACCACCAAAT+TGG - Chr1:53671664-53671683 None:intergenic 30.0%
AACTAGTGCTAATGCATATT+GGG + Chr1:53674286-53674305 MsG0180002949.01.T01:CDS 30.0%
AAGACTGCATCCAAAAAATT+TGG + Chr1:53673606-53673625 MsG0180002949.01.T01:CDS 30.0%
AATAGTTAAAACTCTCCCAA+TGG - Chr1:53671744-53671763 None:intergenic 30.0%
AATCATCTTTCATTGGTATG+TGG + Chr1:53670570-53670589 MsG0180002949.01.T01:intron 30.0%
AATGTTATTCTTTGTTCGAG+TGG - Chr1:53670524-53670543 None:intergenic 30.0%
AATTGAAGAAGAGATCTAAC+GGG - Chr1:53673223-53673242 None:intergenic 30.0%
AGACTGCATCCAAAAAATTT+GGG + Chr1:53673607-53673626 MsG0180002949.01.T01:CDS 30.0%
AGCCTTCAATTTACTTGATT+TGG - Chr1:53670331-53670350 None:intergenic 30.0%
AGTGGTGAAATATTTGGATT+AGG - Chr1:53673081-53673100 None:intergenic 30.0%
ATATATATGGATCCTGTATG+CGG + Chr1:53670404-53670423 MsG0180002949.01.T01:intron 30.0%
ATGGAAAATGAAGGAATTTG+GGG + Chr1:53674031-53674050 MsG0180002949.01.T01:CDS 30.0%
ATTAAATTTGGAAGCTTAGG+AGG - Chr1:53670373-53670392 None:intergenic 30.0%
CAATTTCACAAAAGTTGGAT+CGG - Chr1:53673281-53673300 None:intergenic 30.0%
CCTGTTATAGAGAATTGTTT+GGG - Chr1:53674207-53674226 None:intergenic 30.0%
CGGAATGAATATTTAACCAT+TGG + Chr1:53670424-53670443 MsG0180002949.01.T01:intron 30.0%
CTGAAAAATATTCTCCACAT+TGG - Chr1:53671793-53671812 None:intergenic 30.0%
CTTTAGTACATCTTGTACTT+AGG + Chr1:53670059-53670078 MsG0180002949.01.T01:intron 30.0%
GAAAAATATTCTCCACATTG+GGG - Chr1:53671791-53671810 None:intergenic 30.0%
GAATTGAAGAAGAGATCTAA+CGG - Chr1:53673224-53673243 None:intergenic 30.0%
GCAACTTAAAAAAAGTCTTG+TGG + Chr1:53672157-53672176 MsG0180002949.01.T01:intron 30.0%
GCTTATTGATCGAATTGATT+TGG - Chr1:53673135-53673154 None:intergenic 30.0%
GGAAAAGTCAAAGACTATTT+AGG + Chr1:53671209-53671228 MsG0180002949.01.T01:intron 30.0%
GGTTGTTCAAATGATGATAA+TGG - Chr1:53673476-53673495 None:intergenic 30.0%
GTAGAAATTAACCAATTTGG+TGG + Chr1:53671650-53671669 MsG0180002949.01.T01:intron 30.0%
TAAAAACTTTGTGTGAGAAC+TGG + Chr1:53671938-53671957 MsG0180002949.01.T01:intron 30.0%
TAAATATTCATTCCGCATAC+AGG - Chr1:53670419-53670438 None:intergenic 30.0%
TATCATCATTTGAACAACCA+AGG + Chr1:53673477-53673496 MsG0180002949.01.T01:intron 30.0%
TCCTGTTATAGAGAATTGTT+TGG - Chr1:53674208-53674227 None:intergenic 30.0%
TGTGTTATGCTTATAGAGTT+TGG - Chr1:53671020-53671039 None:intergenic 30.0%
TTAAAACAACCAATAGAGTC+GGG + Chr1:53671553-53671572 MsG0180002949.01.T01:intron 30.0%
TTAGATCTCTTCTTCAATTC+AGG + Chr1:53673224-53673243 MsG0180002949.01.T01:intron 30.0%
TTCAACCGAAACTTATAAAG+TGG + Chr1:53673680-53673699 MsG0180002949.01.T01:CDS 30.0%
TTGGTAGACATTAACCAATT+TGG + Chr1:53671703-53671722 MsG0180002949.01.T01:intron 30.0%
TTTAACCATTGGTAAATGAC+AGG + Chr1:53670435-53670454 MsG0180002949.01.T01:intron 30.0%
TTTCAGTTTATTCACTCTAC+AGG + Chr1:53669755-53669774 MsG0180002949.01.T01:CDS 30.0%
TTTGTCAAACATTGTCAGAT+TGG - Chr1:53671580-53671599 None:intergenic 30.0%
! AACCTCTGGAGATAAAAAAT+TGG - Chr1:53670914-53670933 None:intergenic 30.0%
! AGGTTTCTTTATTTGTTTGG+CGG - Chr1:53670607-53670626 None:intergenic 30.0%
! CAATGTGGAGAATATTTTTC+AGG + Chr1:53671791-53671810 MsG0180002949.01.T01:intron 30.0%
! GTAACAACAACAACTCTTTT+TGG + Chr1:53670255-53670274 MsG0180002949.01.T01:intron 30.0%
! GTATTGGATTAGGATTCTAT+GGG + Chr1:53672077-53672096 MsG0180002949.01.T01:intron 30.0%
! GTTTTTGTGATTGTGATTTC+TGG - Chr1:53673309-53673328 None:intergenic 30.0%
! TGTATTGGATTAGGATTCTA+TGG + Chr1:53672076-53672095 MsG0180002949.01.T01:intron 30.0%
! TTATATGGTTACTTTGTGTC+TGG + Chr1:53669810-53669829 MsG0180002949.01.T01:CDS 30.0%
! TTTTCGAATAAACGATCGAT+AGG - Chr1:53673426-53673445 None:intergenic 30.0%
!! AAAGTATTGATCATCGTTTG+TGG - Chr1:53670487-53670506 None:intergenic 30.0%
!! AAATAGTCTTTGACTTTTCC+AGG - Chr1:53671209-53671228 None:intergenic 30.0%
!! AAGTATTGATCATCGTTTGT+GGG - Chr1:53670486-53670505 None:intergenic 30.0%
!! AATAGTCTTTGACTTTTCCA+GGG - Chr1:53671208-53671227 None:intergenic 30.0%
!! ATTTACTTGATTTGGATGAC+CGG - Chr1:53670323-53670342 None:intergenic 30.0%
!! CGTTTGAGTTTTTCTAAGAA+AGG - Chr1:53672529-53672548 None:intergenic 30.0%
!! CTGACTTTTAAGGATTTCAA+AGG - Chr1:53672919-53672938 None:intergenic 30.0%
!! TATTGATCGAATTGATTTGG+AGG - Chr1:53673132-53673151 None:intergenic 30.0%
!! TGTTTTTCTTATTTGCACAG+GGG + Chr1:53673993-53674012 MsG0180002949.01.T01:CDS 30.0%
!! TTTAAAATTTATGGCGGATG+AGG - Chr1:53670844-53670863 None:intergenic 30.0%
!! TTTAATTTCACTCCTTTTGG+TGG + Chr1:53669906-53669925 MsG0180002949.01.T01:intron 30.0%
!!! AAATTTTTTGGATGCAGTCT+TGG - Chr1:53673607-53673626 None:intergenic 30.0%
!!! AATAAGGCCACTTTTATGTA+CGG + Chr1:53669938-53669957 MsG0180002949.01.T01:intron 30.0%
!!! CCTCATTTTTTGTTCGTTTT+CGG - Chr1:53671156-53671175 None:intergenic 30.0%
!!! CTCATTTTTTGTTCGTTTTC+GGG - Chr1:53671155-53671174 None:intergenic 30.0%
!!! TGGATTTTGATGGATTTTGT+GGG + Chr1:53672305-53672324 MsG0180002949.01.T01:intron 30.0%
!!! TTCCAATTTTTTATCTCCAG+AGG + Chr1:53670909-53670928 MsG0180002949.01.T01:intron 30.0%
!!! TTGGATTTTGATGGATTTTG+TGG + Chr1:53672304-53672323 MsG0180002949.01.T01:intron 30.0%
AAATGAGTTATGTGTACACG+TGG + Chr1:53672007-53672026 MsG0180002949.01.T01:intron 35.0%
AACCGAAACTTATAAAGTGG+TGG + Chr1:53673683-53673702 MsG0180002949.01.T01:CDS 35.0%
AATCAATACACTGTTCCTTG+TGG + Chr1:53673915-53673934 MsG0180002949.01.T01:CDS 35.0%
AATGAGTTATGTGTACACGT+GGG + Chr1:53672008-53672027 MsG0180002949.01.T01:intron 35.0%
ACAATGAAGAGACAAAGCAA+AGG - Chr1:53670013-53670032 None:intergenic 35.0%
ACACGAAAAATCAAACCTTC+AGG + Chr1:53671050-53671069 MsG0180002949.01.T01:intron 35.0%
ACATGATTCGAACACTAAAG+TGG + Chr1:53670132-53670151 MsG0180002949.01.T01:intron 35.0%
ACTAGTGCTAATGCATATTG+GGG + Chr1:53674287-53674306 MsG0180002949.01.T01:CDS 35.0%
AGGTGCAATTTCACAAAAGT+TGG - Chr1:53673286-53673305 None:intergenic 35.0%
ATCTTGCTCGTCAAAAGTTT+AGG + Chr1:53670934-53670953 MsG0180002949.01.T01:intron 35.0%
ATTGAAGAAGAGATCTAACG+GGG - Chr1:53673222-53673241 None:intergenic 35.0%
CAAAAGTTGGATCGGAAATT+AGG - Chr1:53673273-53673292 None:intergenic 35.0%
CACAAACATGTGTATTTGAG+TGG + Chr1:53673804-53673823 MsG0180002949.01.T01:CDS 35.0%
CACTCAAATACACATGTTTG+TGG - Chr1:53673806-53673825 None:intergenic 35.0%
CCCAAACAATTCTCTATAAC+AGG + Chr1:53674204-53674223 MsG0180002949.01.T01:CDS 35.0%
CCGAAAACGAACAAAAAATG+AGG + Chr1:53671153-53671172 MsG0180002949.01.T01:intron 35.0%
CGTAAAAAACGGTGAAGAAA+GGG - Chr1:53673449-53673468 None:intergenic 35.0%
GAACTAGTGCTAATGCATAT+TGG + Chr1:53674285-53674304 MsG0180002949.01.T01:CDS 35.0%
GACGATTCCTTTCTTTCTAA+AGG + Chr1:53670288-53670307 MsG0180002949.01.T01:intron 35.0%
GAGTCTAGTGGTGAAATATT+TGG - Chr1:53673087-53673106 None:intergenic 35.0%
GGTTGAATTATCACATCCAA+AGG - Chr1:53673667-53673686 None:intergenic 35.0%
GTAGACATTAACCAATTTGG+TGG + Chr1:53671706-53671725 MsG0180002949.01.T01:intron 35.0%
GTTGTCAAGATTTAGAGAAC+TGG + Chr1:53673559-53673578 MsG0180002949.01.T01:CDS 35.0%
TAATGGCACCAACTGAAAAT+AGG - Chr1:53674135-53674154 None:intergenic 35.0%
TAGTACATCTTGTACTTAGG+TGG + Chr1:53670062-53670081 MsG0180002949.01.T01:intron 35.0%
TATTCACAACAGTGATACTG+TGG + Chr1:53673848-53673867 MsG0180002949.01.T01:CDS 35.0%
TCAAACGACGTACAAATGTT+GGG + Chr1:53671233-53671252 MsG0180002949.01.T01:intron 35.0%
TCAAGTTCATCGTCATTTAC+CGG - Chr1:53673379-53673398 None:intergenic 35.0%
TCGTAAAAAACGGTGAAGAA+AGG - Chr1:53673450-53673469 None:intergenic 35.0%
TGCTATTGTTTCACTTGATC+TGG + Chr1:53673878-53673897 MsG0180002949.01.T01:CDS 35.0%
TGGGTCTTAGGTCAAAAATT+GGG + Chr1:53671252-53671271 MsG0180002949.01.T01:intron 35.0%
TGTATGACTAACTGTTTCCA+GGG + Chr1:53670030-53670049 MsG0180002949.01.T01:intron 35.0%
TTAAGACTCTCACTTCTAAG+CGG + Chr1:53671838-53671857 MsG0180002949.01.T01:intron 35.0%
TTATGGGGATGTATTGGATT+AGG + Chr1:53672067-53672086 MsG0180002949.01.T01:intron 35.0%
TTCTACTAGCTGTTCAATGT+TGG - Chr1:53669882-53669901 None:intergenic 35.0%
TTGAGAACCGTACATAAAAG+TGG - Chr1:53669948-53669967 None:intergenic 35.0%
TTGGGTCTTAGGTCAAAAAT+TGG + Chr1:53671251-53671270 MsG0180002949.01.T01:intron 35.0%
TTGTAATCGAGAGACAACAT+CGG + Chr1:53673710-53673729 MsG0180002949.01.T01:CDS 35.0%
TTGTATGACTAACTGTTTCC+AGG + Chr1:53670029-53670048 MsG0180002949.01.T01:intron 35.0%
! GAATGTTTTCCTGTTGTTCT+TGG + Chr1:53673780-53673799 MsG0180002949.01.T01:CDS 35.0%
! TGACACTACCTATTTTCAGT+TGG + Chr1:53674124-53674143 MsG0180002949.01.T01:CDS 35.0%
! TGACTTTTCCAGGGAAATTT+CGG - Chr1:53671199-53671218 None:intergenic 35.0%
! TTGATTTTTCGTGTTACCTG+TGG - Chr1:53671044-53671063 None:intergenic 35.0%
! TTGGTGGCTTAAAGCTAATA+AGG + Chr1:53669922-53669941 MsG0180002949.01.T01:intron 35.0%
! TTTAAGATCCGGTACCTATT+AGG + Chr1:53671762-53671781 MsG0180002949.01.T01:intron 35.0%
! TTTAGCCTGTCATTTACCAA+TGG - Chr1:53670443-53670462 None:intergenic 35.0%
! TTTGGGTCCTTTAGAAAGAA+AGG - Chr1:53670298-53670317 None:intergenic 35.0%
! TTTGTGATTGTGATTTCTGG+AGG - Chr1:53673306-53673325 None:intergenic 35.0%
!! AATTTGGGGTTGATGATTCT+TGG + Chr1:53674045-53674064 MsG0180002949.01.T01:CDS 35.0%
!! ATTAGCTTTAAGCCACCAAA+AGG - Chr1:53669921-53669940 None:intergenic 35.0%
!! GGGGAGATGATTTTGTTATA+TGG + Chr1:53674012-53674031 MsG0180002949.01.T01:CDS 35.0%
!! GTTGGTGCCATTATTTCTTT+CGG + Chr1:53674142-53674161 MsG0180002949.01.T01:CDS 35.0%
!! GTTTGGTTTGAAAAATGGCA+AGG - Chr1:53671003-53671022 None:intergenic 35.0%
!!! CATTTTTTTGCAAGAAGGAG+TGG - Chr1:53670765-53670784 None:intergenic 35.0%
!!! GCGAGTATACCCAAATTTTT+TGG - Chr1:53673619-53673638 None:intergenic 35.0%
!!! GTTTTGATTTTCATTACCGG+TGG - Chr1:53670164-53670183 None:intergenic 35.0%
AAATTTGGAAGCTTAGGAGG+CGG - Chr1:53670370-53670389 None:intergenic 40.0%
ACGTACAAATGTTGGGTCTT+AGG + Chr1:53671240-53671259 MsG0180002949.01.T01:intron 40.0%
ATGCCACAATGTACTGAAAG+TGG - Chr1:53669675-53669694 None:intergenic 40.0%
ATTTGAGTGGCACTATGAAC+TGG + Chr1:53673817-53673836 MsG0180002949.01.T01:CDS 40.0%
CAAACGAAGCAATCCATTAC+AGG - Chr1:53673523-53673542 None:intergenic 40.0%
CAACTATTCCAGTACTTCCT+TGG - Chr1:53673497-53673516 None:intergenic 40.0%
CATCATATCAGGTCTTGGAT+CGG + Chr1:53669692-53669711 MsG0180002949.01.T01:CDS 40.0%
CCATCCTCCGAAAGAAATAA+TGG - Chr1:53674152-53674171 None:intergenic 40.0%
CGCCACCACTTTATAAGTTT+CGG - Chr1:53673688-53673707 None:intergenic 40.0%
GAAGCGCACAATCTATAATC+CGG + Chr1:53673357-53673376 MsG0180002949.01.T01:intron 40.0%
GAGTGGAGGATAATTGAGAT+TGG - Chr1:53670748-53670767 None:intergenic 40.0%
GATGCTCTTGCTCATTTATG+GGG + Chr1:53672052-53672071 MsG0180002949.01.T01:intron 40.0%
GATGGTCTAAACCACCAAAT+TGG - Chr1:53671720-53671739 None:intergenic 40.0%
GCTCATTTATGGGGATGTAT+TGG + Chr1:53672061-53672080 MsG0180002949.01.T01:intron 40.0%
GGATGCTCTTGCTCATTTAT+GGG + Chr1:53672051-53672070 MsG0180002949.01.T01:intron 40.0%
GGGTCTTAGGTCAAAAATTG+GGG + Chr1:53671253-53671272 MsG0180002949.01.T01:intron 40.0%
GGTAAATGACGATGAACTTG+AGG + Chr1:53673378-53673397 MsG0180002949.01.T01:intron 40.0%
GTACATTGTGGCATCATATC+AGG + Chr1:53669681-53669700 MsG0180002949.01.T01:CDS 40.0%
GTATGACTAACTGTTTCCAG+GGG + Chr1:53670031-53670050 MsG0180002949.01.T01:intron 40.0%
GTCAAACGACGTACAAATGT+TGG + Chr1:53671232-53671251 MsG0180002949.01.T01:intron 40.0%
GTTGAAGGTTCGGACATATA+TGG - Chr1:53670659-53670678 None:intergenic 40.0%
TAAAACTCTCCCAATGGAGA+TGG - Chr1:53671738-53671757 None:intergenic 40.0%
TAAGACTCTCACTTCTAAGC+GGG + Chr1:53671839-53671858 MsG0180002949.01.T01:intron 40.0%
TATAAGCATAACACAGCCAC+AGG + Chr1:53671025-53671044 MsG0180002949.01.T01:intron 40.0%
TCAGGTGTGTGAGTAAATCT+TGG + Chr1:53673242-53673261 MsG0180002949.01.T01:intron 40.0%
TGCTCGTCAAAAGTTTAGGT+AGG + Chr1:53670938-53670957 MsG0180002949.01.T01:intron 40.0%
TGGATGCTCTTGCTCATTTA+TGG + Chr1:53672050-53672069 MsG0180002949.01.T01:intron 40.0%
TGGTTTAGACCATCTCCATT+GGG + Chr1:53671726-53671745 MsG0180002949.01.T01:intron 40.0%
TGTACGGTTCTCAAAGATTG+TGG + Chr1:53669954-53669973 MsG0180002949.01.T01:intron 40.0%
TGTTTCACTTGATCTGGAGA+CGG + Chr1:53673884-53673903 MsG0180002949.01.T01:CDS 40.0%
! ACTAAAGTGGATTTGACCAC+CGG + Chr1:53670145-53670164 MsG0180002949.01.T01:intron 40.0%
! ATGGTTACTTTGTGTCTGGT+TGG + Chr1:53669814-53669833 MsG0180002949.01.T01:CDS 40.0%
! CCATTATTTCTTTCGGAGGA+TGG + Chr1:53674149-53674168 MsG0180002949.01.T01:CDS 40.0%
! CTAGCTGTTCAATGTTGGTT+TGG - Chr1:53669877-53669896 None:intergenic 40.0%
! GAACAAAGCGACTCTTTTGA+AGG - Chr1:53670627-53670646 None:intergenic 40.0%
! GGAATAGTTGGTTCCTGTAA+TGG + Chr1:53673507-53673526 MsG0180002949.01.T01:CDS 40.0%
! TACTTTGTGTCTGGTTGGTT+TGG + Chr1:53669819-53669838 MsG0180002949.01.T01:CDS 40.0%
! TATGTTGTCTTTTGTGGAGC+AGG - Chr1:53670681-53670700 None:intergenic 40.0%
! TTGAACAACCAAGGAAGTAC+TGG + Chr1:53673486-53673505 MsG0180002949.01.T01:intron 40.0%
! TTTCTAAAGGACCCAAACAC+CGG + Chr1:53670301-53670320 MsG0180002949.01.T01:intron 40.0%
!! CAAGGAAGTACTGGAATAGT+TGG + Chr1:53673495-53673514 MsG0180002949.01.T01:intron 40.0%
!! CTGTAATGGATTGCTTCGTT+TGG + Chr1:53673521-53673540 MsG0180002949.01.T01:CDS 40.0%
!! GAATTGATTTGGAGGCATGA+TGG - Chr1:53673124-53673143 None:intergenic 40.0%
!! TTTGTGGGTTGTGGGTTTTA+TGG - Chr1:53670471-53670490 None:intergenic 40.0%
!!! TTTTTTGCAAGAAGGAGTGG+AGG - Chr1:53670762-53670781 None:intergenic 40.0%
!!! TTTTTTGGATGCAGTCTTGG+TGG - Chr1:53673604-53673623 None:intergenic 40.0%
AAAGGTGAGAGAGAGAAGAG+AGG - Chr1:53672511-53672530 None:intergenic 45.0%
AAGGTGAGAGAGAGAAGAGA+GGG - Chr1:53672510-53672529 None:intergenic 45.0%
ACACCAATAGTTGGCGAGTT+AGG - Chr1:53673957-53673976 None:intergenic 45.0%
ACGAAGAGAGAAAGGAGAGA+GGG - Chr1:53672450-53672469 None:intergenic 45.0%
AGAGAGAGACGAAGAGAGAA+AGG - Chr1:53672458-53672477 None:intergenic 45.0%
AGCACTTCATCAACACCACA+AGG - Chr1:53673933-53673952 None:intergenic 45.0%
ATCCACAATGGAACACCCAT+GGG - Chr1:53672035-53672054 None:intergenic 45.0%
CGGACATATATGGCATTGCT+TGG - Chr1:53670649-53670668 None:intergenic 45.0%
CGGTTCTCAAAGATTGTGGT+CGG + Chr1:53669958-53669977 MsG0180002949.01.T01:intron 45.0%
CTGATGAGAGTGAAACCTGA+AGG - Chr1:53671068-53671087 None:intergenic 45.0%
GAGGTCAGAGTTCTCAACTT+GGG + Chr1:53673732-53673751 MsG0180002949.01.T01:CDS 45.0%
GATGAGGTTATTAGCATGGG+AGG - Chr1:53670828-53670847 None:intergenic 45.0%
GATTTGGATGACCGGTGTTT+GGG - Chr1:53670315-53670334 None:intergenic 45.0%
GCGGATGAGGTTATTAGCAT+GGG - Chr1:53670831-53670850 None:intergenic 45.0%
GTGGTTTAGACCATCTCCAT+TGG + Chr1:53671725-53671744 MsG0180002949.01.T01:intron 45.0%
TAATCGAGAGACAACATCGG+AGG + Chr1:53673713-53673732 MsG0180002949.01.T01:CDS 45.0%
TGCATATTGGGGCTATGAGT+TGG + Chr1:53674298-53674317 MsG0180002949.01.T01:CDS 45.0%
TGTGGCATCATATCAGGTCT+TGG + Chr1:53669687-53669706 MsG0180002949.01.T01:CDS 45.0%
TGTTTGTGGCCAAGAACAAC+AGG - Chr1:53673792-53673811 None:intergenic 45.0%
TTCGAGTGGTTGTGAGAATG+AGG - Chr1:53670510-53670529 None:intergenic 45.0%
TTGACGAGCAAGATAACCTC+TGG - Chr1:53670928-53670947 None:intergenic 45.0%
! ACCCTTTTCACCCTAAAAGC+GGG + Chr1:53671129-53671148 MsG0180002949.01.T01:intron 45.0%
! ACTTGGGTGGTGATGATGTT+TGG + Chr1:53673748-53673767 MsG0180002949.01.T01:CDS 45.0%
! ATGTACTAAAGTGTCACCCC+TGG - Chr1:53670050-53670069 None:intergenic 45.0%
! CACCCTTTTCACCCTAAAAG+CGG + Chr1:53671128-53671147 MsG0180002949.01.T01:intron 45.0%
! CTTCAGGTTTCACTCTCATC+AGG + Chr1:53671066-53671085 MsG0180002949.01.T01:intron 45.0%
! GATCATCGTTTGTGGGTTGT+GGG - Chr1:53670479-53670498 None:intergenic 45.0%
! TCAGGGTCTTATAAGACTCG+AGG + Chr1:53671809-53671828 MsG0180002949.01.T01:intron 45.0%
! TGATCATCGTTTGTGGGTTG+TGG - Chr1:53670480-53670499 None:intergenic 45.0%
! TGATTTGGATGACCGGTGTT+TGG - Chr1:53670316-53670335 None:intergenic 45.0%
!! ATGAGCAAGAGCATCCACAA+TGG - Chr1:53672047-53672066 None:intergenic 45.0%
!! GGGGAGAAATGAAAGTACCT+CGG - Chr1:53673203-53673222 None:intergenic 45.0%
!! GGTGCCATTATTTCTTTCGG+AGG + Chr1:53674145-53674164 MsG0180002949.01.T01:CDS 45.0%
!! GTGCCACTTTCAGTACATTG+TGG + Chr1:53669669-53669688 MsG0180002949.01.T01:CDS 45.0%
!! TCTTTTGTGGAGCAGGTTGA+AGG - Chr1:53670674-53670693 None:intergenic 45.0%
!! TTTAAAAACAAAATTAAAAT+GGG - Chr1:53671416-53671435 None:intergenic 5.0%
!!! AAATTTGTTTTTAAAATTTA+TGG - Chr1:53670853-53670872 None:intergenic 5.0%
!!! AGTTTTAAATAATTTTTTTT+TGG - Chr1:53671485-53671504 None:intergenic 5.0%
!!! ATAGTAAAATTTTTTTTTAT+TGG + Chr1:53672767-53672786 MsG0180002949.01.T01:intron 5.0%
!!! TTTTAAAAACAAAATTAAAA+TGG - Chr1:53671417-53671436 None:intergenic 5.0%
AAGAGAGAAAGGAGAGAGGG+GGG - Chr1:53672447-53672466 None:intergenic 50.0%
AGCATGGGAGGAGGAACAAA+TGG - Chr1:53670816-53670835 None:intergenic 50.0%
AGGTCTTGGATCGGAATGTC+AGG + Chr1:53669701-53669720 MsG0180002949.01.T01:CDS 50.0%
AGGTGAGAGAGAGAAGAGAG+GGG - Chr1:53672509-53672528 None:intergenic 50.0%
ATGGGAGGAGGAACAAATGG+AGG - Chr1:53670813-53670832 None:intergenic 50.0%
CATCCACAATGGAACACCCA+TGG - Chr1:53672036-53672055 None:intergenic 50.0%
CCAACTATTGGTGTGCTTGG+AGG + Chr1:53673963-53673982 MsG0180002949.01.T01:CDS 50.0%
CCTATTAGGTACCCCCAATG+TGG + Chr1:53671776-53671795 MsG0180002949.01.T01:intron 50.0%
CCTCCAAGCACACCAATAGT+TGG - Chr1:53673966-53673985 None:intergenic 50.0%
CGAAGAGAGAAAGGAGAGAG+GGG - Chr1:53672449-53672468 None:intergenic 50.0%
CGATCGATAGGTGTCTAACG+AGG - Chr1:53673414-53673433 None:intergenic 50.0%
CTGCCTAACTCGCCAACTAT+TGG + Chr1:53673951-53673970 MsG0180002949.01.T01:CDS 50.0%
GAAGAGAGAAAGGAGAGAGG+GGG - Chr1:53672448-53672467 None:intergenic 50.0%
GACGAAGAGAGAAAGGAGAG+AGG - Chr1:53672451-53672470 None:intergenic 50.0%
GAGGTTATTAGCATGGGAGG+AGG - Chr1:53670825-53670844 None:intergenic 50.0%
GAGTGGCACTATGAACTGGT+TGG + Chr1:53673821-53673840 MsG0180002949.01.T01:CDS 50.0%
GGAGGTCAGAGTTCTCAACT+TGG + Chr1:53673731-53673750 MsG0180002949.01.T01:CDS 50.0%
GGCGGATGAGGTTATTAGCA+TGG - Chr1:53670832-53670851 None:intergenic 50.0%
GTCAGAGTTCTCAACTTGGG+TGG + Chr1:53673735-53673754 MsG0180002949.01.T01:CDS 50.0%
TCACTCTACAGGTCACTCGA+AGG + Chr1:53669766-53669785 MsG0180002949.01.T01:CDS 50.0%
TCGCCAACTATTGGTGTGCT+TGG + Chr1:53673960-53673979 MsG0180002949.01.T01:CDS 50.0%
TTCACTTGATCTGGAGACGG+AGG + Chr1:53673887-53673906 MsG0180002949.01.T01:CDS 50.0%
TTCGGAGGATGGTGATTCAC+TGG + Chr1:53674160-53674179 MsG0180002949.01.T01:CDS 50.0%
! CAGATTGGTCCCGACTCTAT+TGG - Chr1:53671565-53671584 None:intergenic 50.0%
! GGTGGTGATAGTGAGTCTAG+TGG - Chr1:53673099-53673118 None:intergenic 50.0%
! TAGAGAACTGGCTCCGTGTT+TGG + Chr1:53673571-53673590 MsG0180002949.01.T01:CDS 50.0%
! TGATTTGGAGGCATGATGGC+TGG - Chr1:53673120-53673139 None:intergenic 50.0%
! TGGGTGGTGATGATGTTTGG+AGG + Chr1:53673751-53673770 MsG0180002949.01.T01:CDS 50.0%
! TGTGGAGCAGGTTGAAGGTT+CGG - Chr1:53670669-53670688 None:intergenic 50.0%
!! CCACATTGGGGGTACCTAAT+AGG - Chr1:53671779-53671798 None:intergenic 50.0%
!! TGGGGGTACCTAATAGGTAC+CGG - Chr1:53671773-53671792 None:intergenic 50.0%
!!! GCCCGCTTTTAGGGTGAAAA+GGG - Chr1:53671133-53671152 None:intergenic 50.0%
ATGTGTACACGTGGGACCCA+TGG + Chr1:53672016-53672035 MsG0180002949.01.T01:intron 55.0%
CCAGGGAAATTTCGGCAGAG+AGG - Chr1:53671191-53671210 None:intergenic 55.0%
CCTCTCTGCCGAAATTTCCC+TGG + Chr1:53671188-53671207 MsG0180002949.01.T01:intron 55.0%
GACCCATGGGTGTTCCATTG+TGG + Chr1:53672030-53672049 MsG0180002949.01.T01:intron 55.0%
GAGAGAGAGAAGAGAGGGGA+GGG - Chr1:53672505-53672524 None:intergenic 55.0%
GGAGGAGGAACAAATGGAGG+AGG - Chr1:53670810-53670829 None:intergenic 55.0%
TACCTCGGCGATGAGATCGT+CGG - Chr1:53673188-53673207 None:intergenic 55.0%
TGAGAGAGAGAAGAGAGGGG+AGG - Chr1:53672506-53672525 None:intergenic 55.0%
TGGTGGCTGGGTTCCAAACA+CGG - Chr1:53673587-53673606 None:intergenic 55.0%
TGTGTACACGTGGGACCCAT+GGG + Chr1:53672017-53672036 MsG0180002949.01.T01:intron 55.0%
! TGGATGCAGTCTTGGTGGCT+GGG - Chr1:53673599-53673618 None:intergenic 55.0%
! TTGGATGCAGTCTTGGTGGC+TGG - Chr1:53673600-53673619 None:intergenic 55.0%
! TTTGGAGGCATGATGGCTGG+TGG - Chr1:53673117-53673136 None:intergenic 55.0%
!! CGTTTTCGGGCCCGCTTTTA+GGG - Chr1:53671142-53671161 None:intergenic 55.0%
!! TCGTTTTCGGGCCCGCTTTT+AGG - Chr1:53671143-53671162 None:intergenic 55.0%
!!! GGCCCGCTTTTAGGGTGAAA+AGG - Chr1:53671134-53671153 None:intergenic 55.0%
AGAAAGGAGAGAGGGGGGAG+GGG - Chr1:53672442-53672461 None:intergenic 60.0%
AGAGAAAGGAGAGAGGGGGG+AGG - Chr1:53672444-53672463 None:intergenic 60.0%
AGATCGTCGGAGAGGTTCGC+TGG - Chr1:53673175-53673194 None:intergenic 60.0%
GAGAAAGGAGAGAGGGGGGA+GGG - Chr1:53672443-53672462 None:intergenic 60.0%
GCTGGCGACAGAGTCATCGT+AGG - Chr1:53673157-53673176 None:intergenic 60.0%
GGGAGGGGAGAGACAGAGAA+GGG - Chr1:53672427-53672446 None:intergenic 60.0%
CGGCGATGAGATCGTCGGAG+AGG - Chr1:53673183-53673202 None:intergenic 65.0%
CTCCGACGATCTCATCGCCG+AGG + Chr1:53673183-53673202 MsG0180002949.01.T01:intron 65.0%
GGGGAGGGGAGAGACAGAGA+AGG - Chr1:53672428-53672447 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 53669647 53674352 53669647 ID=MsG0180002949.01;Name=MsG0180002949.01
Chr1 mRNA 53669647 53674352 53669647 ID=MsG0180002949.01.T01;Parent=MsG0180002949.01;Name=MsG0180002949.01.T01;_AED=0.37;_eAED=0.38;_QI=0|0|0|1|1|1|2|0|351
Chr1 exon 53669647 53669848 53669647 ID=MsG0180002949.01.T01:exon:2745;Parent=MsG0180002949.01.T01
Chr1 exon 53673499 53674352 53673499 ID=MsG0180002949.01.T01:exon:2746;Parent=MsG0180002949.01.T01
Chr1 CDS 53669647 53669848 53669647 ID=MsG0180002949.01.T01:cds;Parent=MsG0180002949.01.T01
Chr1 CDS 53673499 53674352 53673499 ID=MsG0180002949.01.T01:cds;Parent=MsG0180002949.01.T01
Gene Sequence

>MsG0180002949.01.T01

ATGATTCGAACACTTATTCATTGTGCCACTTTCAGTACATTGTGGCATCATATCAGGTCTTGGATCGGAATGTCAGGTGTTGACCCTTTTAATATTGATGACCATTTATTTCAGTTTATTCACTCTACAGGTCACTCGAAGGCTCGTCAATCCTTTCTTCAACTTATATGGTTACTTTGTGTCTGGTTGGTTTGGAACGAACGAAGTACTGGAATAGTTGGTTCCTGTAATGGATTGCTTCGTTTGGATGTCGATTCTGAAAGTTGTCAAGATTTAGAGAACTGGCTCCGTGTTTGGAACCCAGCCACCAAGACTGCATCCAAAAAATTTGGGTATACTCGCGATCCCAATAAAAATTTTCACTTTGCCTTTGGATGTGATAATTCAACCGAAACTTATAAAGTGGTGGCGTATTGTAATCGAGAGACAACATCGGAGGTCAGAGTTCTCAACTTGGGTGGTGATGATGTTTGGAGGAATATTGAATGTTTTCCTGTTGTTCTTGGCCACAAACATGTGTATTTGAGTGGCACTATGAACTGGTTGGCTACTATTCACAACAGTGATACTGTGGAACACTCTGCTATTGTTTCACTTGATCTGGAGACGGAGGCGTACAATCAATACACTGTTCCTTGTGGTGTTGATGAAGTGCTGCCTAACTCGCCAACTATTGGTGTGCTTGGAGGCTGCCTTTGTTTTTCTTATTTGCACAGGGGAGATGATTTTGTTATATGGAAAATGAAGGAATTTGGGGTTGATGATTCTTGGACTCAATTACTTAAAGTTAGTTACCATGATCTTCTAATAGATTATGATGACTTTAGTGACACTACCTATTTTCAGTTGGTGCCATTATTTCTTTCGGAGGATGGTGATTCACTGGTACTTCATAGCAATCTAGAATCCCAAACAATTCTCTATAACAGGAGAGATAATAGAGCAAATCGAACAGAAATTATTGCAAGTAGAACTACTGCTGATAATAGAACTAGTGCTAATGCATATTGGGGCTATGAGTTGGATTATGTTGAAAGCTTAGTTCCAATTTTTTGA
Protein sequence

>MsG0180002949.01.T01

MIRTLIHCATFSTLWHHIRSWIGMSGVDPFNIDDHLFQFIHSTGHSKARQSFLQLIWLLCVWLVWNERSTGIVGSCNGLLRLDVDSESCQDLENWLRVWNPATKTASKKFGYTRDPNKNFHFAFGCDNSTETYKVVAYCNRETTSEVRVLNLGGDDVWRNIECFPVVLGHKHVYLSGTMNWLATIHNSDTVEHSAIVSLDLETEAYNQYTVPCGVDEVLPNSPTIGVLGGCLCFSYLHRGDDFVIWKMKEFGVDDSWTQLLKVSYHDLLIDYDDFSDTTYFQLVPLFLSEDGDSLVLHSNLESQTILYNRRDNRANRTEIIASRTTADNRTSANAYWGYELDYVESLVPIF*