Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035283.01.T01 | KEH16624.1 | 72.947 | 414 | 82 | 8 | 3 | 401 | 4 | 402 | 0 | 562 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035283.01.T01 | Q8GXC7 | 25.735 | 408 | 221 | 18 | 16 | 386 | 39 | 401 | 1.10E-12 | 72.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035283.01.T01 | A0A072TGC3 | 72.947 | 414 | 82 | 8 | 3 | 401 | 4 | 402 | 0.0 | 562 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035283.01.T01 | MTR_0129s0050 | 72.947 | 414 | 82 | 8 | 3 | 401 | 4 | 402 | 0.0 | 562 |
MsG0680035283.01.T01 | MTR_0129s0070 | 62.687 | 402 | 133 | 5 | 2 | 402 | 6 | 391 | 6.01e-171 | 484 |
MsG0680035283.01.T01 | MTR_0129s0120 | 60.697 | 402 | 141 | 5 | 2 | 402 | 6 | 391 | 1.81e-163 | 465 |
MsG0680035283.01.T01 | MTR_4g117550 | 55.802 | 405 | 133 | 8 | 1 | 401 | 5 | 367 | 4.58e-142 | 410 |
MsG0680035283.01.T01 | MTR_8g063440 | 47.250 | 400 | 184 | 9 | 5 | 402 | 4 | 378 | 1.56e-108 | 325 |
MsG0680035283.01.T01 | MTR_2g021800 | 45.301 | 415 | 193 | 10 | 5 | 399 | 8 | 408 | 6.10e-107 | 322 |
MsG0680035283.01.T01 | MTR_2g038680 | 44.952 | 416 | 198 | 9 | 3 | 402 | 6 | 406 | 3.75e-104 | 315 |
MsG0680035283.01.T01 | MTR_2g022000 | 43.357 | 429 | 203 | 12 | 5 | 413 | 8 | 416 | 2.72e-103 | 313 |
MsG0680035283.01.T01 | MTR_5g097330 | 44.552 | 413 | 192 | 11 | 5 | 402 | 8 | 398 | 2.84e-102 | 310 |
MsG0680035283.01.T01 | MTR_2g021770 | 42.755 | 421 | 209 | 11 | 1 | 405 | 1 | 405 | 5.04e-99 | 301 |
MsG0680035283.01.T01 | MTR_6g086825 | 45.833 | 408 | 189 | 11 | 10 | 403 | 67 | 456 | 6.95e-99 | 303 |
MsG0680035283.01.T01 | MTR_1g007450 | 46.329 | 395 | 194 | 6 | 3 | 393 | 2 | 382 | 8.05e-99 | 301 |
MsG0680035283.01.T01 | MTR_4g014370 | 42.290 | 428 | 189 | 12 | 6 | 402 | 4 | 404 | 4.41e-98 | 299 |
MsG0680035283.01.T01 | MTR_6g090180 | 43.662 | 426 | 204 | 9 | 3 | 418 | 37 | 436 | 3.35e-97 | 298 |
MsG0680035283.01.T01 | MTR_3g011120 | 44.527 | 402 | 181 | 12 | 3 | 397 | 4 | 370 | 5.44e-97 | 295 |
MsG0680035283.01.T01 | MTR_6g079810 | 42.518 | 421 | 212 | 8 | 3 | 408 | 59 | 464 | 8.31e-96 | 295 |
MsG0680035283.01.T01 | MTR_8g464770 | 44.030 | 402 | 189 | 11 | 3 | 399 | 2 | 372 | 1.43e-94 | 289 |
MsG0680035283.01.T01 | MTR_6g079770 | 43.932 | 412 | 203 | 7 | 8 | 402 | 12 | 412 | 1.70e-93 | 288 |
MsG0680035283.01.T01 | MTR_6g461660 | 44.203 | 414 | 188 | 12 | 4 | 402 | 10 | 395 | 1.82e-93 | 287 |
MsG0680035283.01.T01 | MTR_7g017130 | 44.665 | 403 | 196 | 9 | 7 | 403 | 12 | 393 | 3.39e-93 | 286 |
MsG0680035283.01.T01 | MTR_0054s0090 | 41.330 | 421 | 200 | 10 | 3 | 402 | 7 | 401 | 1.14e-92 | 285 |
MsG0680035283.01.T01 | MTR_5g097220 | 42.254 | 426 | 199 | 13 | 1 | 402 | 1 | 403 | 6.23e-92 | 283 |
MsG0680035283.01.T01 | MTR_0134s0060 | 43.826 | 413 | 198 | 10 | 5 | 397 | 4 | 402 | 7.17e-92 | 283 |
MsG0680035283.01.T01 | MTR_8g012090 | 45.337 | 386 | 138 | 8 | 5 | 376 | 8 | 334 | 1.01e-91 | 280 |
MsG0680035283.01.T01 | MTR_4g102410 | 42.995 | 414 | 203 | 14 | 3 | 402 | 51 | 445 | 1.45e-91 | 283 |
MsG0680035283.01.T01 | MTR_0054s0100 | 41.667 | 420 | 200 | 11 | 3 | 401 | 7 | 402 | 2.00e-91 | 282 |
MsG0680035283.01.T01 | MTR_2g066170 | 43.210 | 405 | 196 | 13 | 5 | 402 | 4 | 381 | 6.17e-91 | 280 |
MsG0680035283.01.T01 | MTR_7g017170 | 43.614 | 415 | 195 | 10 | 7 | 403 | 12 | 405 | 2.16e-90 | 279 |
MsG0680035283.01.T01 | MTR_2g021950 | 43.210 | 405 | 199 | 11 | 7 | 402 | 10 | 392 | 3.90e-90 | 278 |
MsG0680035283.01.T01 | MTR_2g104340 | 43.552 | 411 | 196 | 15 | 3 | 401 | 4 | 390 | 4.10e-90 | 278 |
MsG0680035283.01.T01 | MTR_6g080680 | 42.788 | 416 | 190 | 10 | 1 | 401 | 7 | 389 | 6.92e-90 | 278 |
MsG0680035283.01.T01 | MTR_2g066200 | 42.336 | 411 | 197 | 13 | 3 | 402 | 2 | 383 | 1.07e-89 | 277 |
MsG0680035283.01.T01 | MTR_4g055820 | 45.946 | 370 | 179 | 10 | 2 | 363 | 3 | 359 | 1.84e-89 | 275 |
MsG0680035283.01.T01 | MTR_6g478230 | 42.169 | 415 | 198 | 9 | 3 | 403 | 17 | 403 | 3.68e-88 | 274 |
MsG0680035283.01.T01 | MTR_4g028510 | 42.143 | 420 | 202 | 13 | 1 | 402 | 1 | 397 | 1.19e-87 | 274 |
MsG0680035283.01.T01 | MTR_7g069550 | 42.029 | 414 | 197 | 16 | 3 | 399 | 4 | 391 | 2.17e-87 | 271 |
MsG0680035283.01.T01 | MTR_0831s0010 | 41.045 | 402 | 196 | 14 | 10 | 402 | 47 | 416 | 4.02e-87 | 271 |
MsG0680035283.01.T01 | MTR_5g096630 | 42.373 | 413 | 206 | 11 | 7 | 402 | 12 | 409 | 2.25e-86 | 269 |
MsG0680035283.01.T01 | MTR_8g041270 | 43.405 | 417 | 197 | 15 | 3 | 401 | 5 | 400 | 2.77e-85 | 266 |
MsG0680035283.01.T01 | MTR_4g028660 | 41.446 | 415 | 203 | 10 | 1 | 399 | 1 | 391 | 3.04e-85 | 266 |
MsG0680035283.01.T01 | MTR_4g027450 | 41.446 | 415 | 203 | 10 | 1 | 399 | 1 | 391 | 3.04e-85 | 266 |
MsG0680035283.01.T01 | MTR_5g037680 | 41.162 | 413 | 185 | 13 | 8 | 399 | 3 | 378 | 3.28e-85 | 267 |
MsG0680035283.01.T01 | MTR_4g028680 | 42.824 | 425 | 190 | 15 | 1 | 402 | 1 | 395 | 1.53e-84 | 264 |
MsG0680035283.01.T01 | MTR_5g097680 | 40.984 | 427 | 206 | 14 | 7 | 402 | 11 | 422 | 1.70e-84 | 265 |
MsG0680035283.01.T01 | MTR_5g069390 | 39.810 | 422 | 209 | 13 | 6 | 406 | 19 | 416 | 3.79e-84 | 266 |
MsG0680035283.01.T01 | MTR_5g059430 | 38.695 | 429 | 223 | 12 | 2 | 407 | 15 | 426 | 6.60e-84 | 263 |
MsG0680035283.01.T01 | MTR_8g467670 | 41.769 | 407 | 193 | 13 | 1 | 399 | 1 | 371 | 6.80e-83 | 259 |
MsG0680035283.01.T01 | MTR_2g034700 | 41.505 | 412 | 184 | 12 | 1 | 399 | 1 | 368 | 1.11e-82 | 258 |
MsG0680035283.01.T01 | MTR_4g130330 | 42.892 | 408 | 193 | 15 | 10 | 402 | 4 | 386 | 1.28e-82 | 259 |
MsG0680035283.01.T01 | MTR_2g065860 | 39.903 | 411 | 201 | 12 | 6 | 402 | 5 | 383 | 1.99e-82 | 258 |
MsG0680035283.01.T01 | MTR_8g039500 | 43.194 | 382 | 168 | 13 | 5 | 376 | 4 | 346 | 2.04e-82 | 257 |
MsG0680035283.01.T01 | MTR_7g017040 | 44.039 | 411 | 186 | 15 | 8 | 402 | 11 | 393 | 2.47e-82 | 258 |
MsG0680035283.01.T01 | MTR_1g007410 | 43.032 | 409 | 199 | 15 | 4 | 400 | 13 | 399 | 4.00e-82 | 258 |
MsG0680035283.01.T01 | MTR_8g046310 | 41.007 | 417 | 189 | 16 | 1 | 403 | 1 | 374 | 9.45e-82 | 256 |
MsG0680035283.01.T01 | MTR_2g065840 | 39.141 | 419 | 202 | 14 | 3 | 403 | 2 | 385 | 6.53e-81 | 254 |
MsG0680035283.01.T01 | MTR_1g007430 | 44.543 | 339 | 160 | 5 | 24 | 360 | 7 | 319 | 1.14e-80 | 251 |
MsG0680035283.01.T01 | MTR_5g097350 | 41.584 | 404 | 189 | 12 | 8 | 399 | 11 | 379 | 3.18e-80 | 252 |
MsG0680035283.01.T01 | MTR_2g066150 | 37.981 | 416 | 176 | 12 | 5 | 402 | 4 | 355 | 2.63e-79 | 249 |
MsG0680035283.01.T01 | MTR_2g104280 | 39.952 | 413 | 215 | 14 | 4 | 401 | 5 | 399 | 1.25e-78 | 249 |
MsG0680035283.01.T01 | MTR_5g096910 | 38.995 | 418 | 201 | 13 | 3 | 402 | 7 | 388 | 2.25e-78 | 248 |
MsG0680035283.01.T01 | MTR_8g046220 | 37.868 | 441 | 197 | 16 | 1 | 403 | 1 | 402 | 5.25e-78 | 247 |
MsG0680035283.01.T01 | MTR_8g064890 | 40.842 | 404 | 202 | 12 | 7 | 402 | 9 | 383 | 6.77e-78 | 246 |
MsG0680035283.01.T01 | MTR_7g111700 | 40.678 | 413 | 171 | 13 | 5 | 402 | 7 | 360 | 3.81e-77 | 244 |
MsG0680035283.01.T01 | MTR_5g024260 | 41.919 | 396 | 180 | 16 | 10 | 385 | 19 | 384 | 4.22e-77 | 245 |
MsG0680035283.01.T01 | MTR_8g046200 | 39.286 | 448 | 197 | 18 | 1 | 403 | 1 | 418 | 1.02e-75 | 242 |
MsG0680035283.01.T01 | MTR_7g079640 | 40.874 | 389 | 186 | 14 | 3 | 385 | 4 | 354 | 2.07e-75 | 240 |
MsG0680035283.01.T01 | MTR_2g064950 | 39.855 | 414 | 196 | 17 | 4 | 398 | 1 | 380 | 7.56e-75 | 239 |
MsG0680035283.01.T01 | MTR_4g028750 | 40.769 | 390 | 191 | 12 | 10 | 385 | 13 | 376 | 9.15e-74 | 236 |
MsG0680035283.01.T01 | MTR_8g033140 | 36.591 | 440 | 212 | 14 | 3 | 404 | 5 | 415 | 2.20e-73 | 236 |
MsG0680035283.01.T01 | MTR_1g053510 | 38.695 | 429 | 210 | 16 | 1 | 403 | 1 | 402 | 6.03e-73 | 234 |
MsG0680035283.01.T01 | MTR_8g013000 | 41.019 | 373 | 183 | 11 | 4 | 362 | 1 | 350 | 8.41e-73 | 234 |
MsG0680035283.01.T01 | MTR_5g072060 | 41.406 | 384 | 173 | 13 | 11 | 382 | 4 | 347 | 9.58e-73 | 239 |
MsG0680035283.01.T01 | MTR_8g063330 | 40.000 | 365 | 192 | 11 | 5 | 362 | 4 | 348 | 3.61e-72 | 234 |
MsG0680035283.01.T01 | MTR_5g092850 | 39.535 | 430 | 214 | 14 | 2 | 414 | 4 | 404 | 5.16e-72 | 232 |
MsG0680035283.01.T01 | MTR_5g091140 | 40.602 | 399 | 186 | 15 | 3 | 388 | 38 | 398 | 1.03e-71 | 231 |
MsG0680035283.01.T01 | MTR_6g090250 | 39.356 | 404 | 202 | 12 | 31 | 403 | 29 | 420 | 4.47e-70 | 227 |
MsG0680035283.01.T01 | MTR_8g032980 | 38.041 | 439 | 211 | 15 | 2 | 403 | 3 | 417 | 6.43e-70 | 227 |
MsG0680035283.01.T01 | MTR_5g074850 | 39.853 | 409 | 191 | 15 | 1 | 384 | 23 | 401 | 1.71e-68 | 233 |
MsG0680035283.01.T01 | MTR_4g007940 | 38.352 | 352 | 180 | 11 | 62 | 399 | 6 | 334 | 6.25e-68 | 219 |
MsG0680035283.01.T01 | MTR_1g098180 | 37.321 | 418 | 186 | 14 | 3 | 403 | 4 | 362 | 3.01e-67 | 218 |
MsG0680035283.01.T01 | MTR_8g036970 | 36.603 | 418 | 161 | 14 | 17 | 412 | 2 | 337 | 3.87e-67 | 218 |
MsG0680035283.01.T01 | MTR_5g075370 | 39.098 | 399 | 193 | 11 | 10 | 384 | 5 | 377 | 1.07e-66 | 227 |
MsG0680035283.01.T01 | MTR_8g064790 | 36.935 | 398 | 167 | 11 | 11 | 402 | 13 | 332 | 4.68e-66 | 214 |
MsG0680035283.01.T01 | MTR_6g078010 | 38.172 | 372 | 187 | 8 | 50 | 411 | 1 | 339 | 7.29e-66 | 214 |
MsG0680035283.01.T01 | MTR_8g033090 | 37.352 | 423 | 211 | 17 | 10 | 403 | 11 | 408 | 5.45e-65 | 214 |
MsG0680035283.01.T01 | MTR_5g064700 | 39.474 | 380 | 184 | 15 | 52 | 402 | 1 | 363 | 2.05e-64 | 211 |
MsG0680035283.01.T01 | MTR_5g043605 | 36.029 | 408 | 163 | 14 | 5 | 403 | 17 | 335 | 1.54e-62 | 206 |
MsG0680035283.01.T01 | MTR_5g074800 | 38.202 | 356 | 192 | 14 | 52 | 399 | 1 | 336 | 3.38e-62 | 204 |
MsG0680035283.01.T01 | MTR_5g092860 | 38.482 | 369 | 174 | 11 | 31 | 384 | 20 | 350 | 3.97e-62 | 205 |
MsG0680035283.01.T01 | MTR_5g022850 | 36.634 | 404 | 179 | 11 | 8 | 401 | 11 | 347 | 4.16e-62 | 204 |
MsG0680035283.01.T01 | MTR_8g033110 | 36.659 | 431 | 225 | 16 | 1 | 403 | 1 | 411 | 5.31e-62 | 206 |
MsG0680035283.01.T01 | MTR_8g063370 | 34.815 | 405 | 225 | 13 | 11 | 409 | 22 | 393 | 2.58e-61 | 204 |
MsG0680035283.01.T01 | MTR_8g018110 | 34.689 | 418 | 214 | 10 | 10 | 403 | 11 | 393 | 1.65e-60 | 202 |
MsG0680035283.01.T01 | MTR_6g079790 | 40.532 | 301 | 155 | 6 | 113 | 403 | 19 | 305 | 1.99e-60 | 199 |
MsG0680035283.01.T01 | MTR_7g016930 | 40.688 | 349 | 152 | 13 | 6 | 345 | 9 | 311 | 5.04e-60 | 198 |
MsG0680035283.01.T01 | MTR_5g096900 | 42.319 | 345 | 139 | 14 | 8 | 330 | 7 | 313 | 2.99e-59 | 196 |
MsG0680035283.01.T01 | MTR_6g004450 | 43.515 | 239 | 111 | 5 | 166 | 402 | 48 | 264 | 4.19e-57 | 189 |
MsG0680035283.01.T01 | MTR_6g087620 | 37.072 | 321 | 152 | 7 | 85 | 397 | 1 | 279 | 6.40e-57 | 189 |
MsG0680035283.01.T01 | MTR_2g021920 | 44.672 | 244 | 115 | 6 | 167 | 402 | 37 | 268 | 1.21e-55 | 185 |
MsG0680035283.01.T01 | MTR_8g063310 | 33.488 | 430 | 230 | 15 | 5 | 417 | 14 | 404 | 5.26e-54 | 185 |
MsG0680035283.01.T01 | MTR_1g050312 | 37.612 | 335 | 146 | 12 | 78 | 399 | 3 | 287 | 1.03e-53 | 181 |
MsG0680035283.01.T01 | MTR_7g104710 | 39.458 | 332 | 133 | 9 | 5 | 322 | 9 | 286 | 8.91e-53 | 179 |
MsG0680035283.01.T01 | MTR_5g023970 | 48.718 | 195 | 87 | 4 | 210 | 403 | 10 | 192 | 1.58e-52 | 174 |
MsG0680035283.01.T01 | MTR_5g086590 | 39.326 | 267 | 121 | 9 | 126 | 388 | 8 | 237 | 3.88e-52 | 175 |
MsG0680035283.01.T01 | MTR_5g076490 | 38.251 | 366 | 178 | 13 | 50 | 402 | 1 | 331 | 1.49e-51 | 176 |
MsG0680035283.01.T01 | MTR_6g090260 | 43.458 | 214 | 104 | 4 | 192 | 403 | 62 | 260 | 3.42e-50 | 171 |
MsG0680035283.01.T01 | MTR_6g090260 | 52.459 | 61 | 28 | 1 | 3 | 62 | 9 | 69 | 7.00e-11 | 62.8 |
MsG0680035283.01.T01 | MTR_7g023800 | 35.734 | 361 | 159 | 10 | 52 | 398 | 1 | 302 | 5.16e-50 | 171 |
MsG0680035283.01.T01 | MTR_5g094350 | 40.845 | 284 | 137 | 9 | 9 | 281 | 9 | 272 | 7.46e-49 | 167 |
MsG0680035283.01.T01 | MTR_5g097850 | 43.781 | 201 | 100 | 4 | 216 | 414 | 63 | 252 | 1.24e-48 | 166 |
MsG0680035283.01.T01 | MTR_8g063350 | 32.915 | 398 | 181 | 16 | 13 | 398 | 14 | 337 | 2.82e-48 | 168 |
MsG0680035283.01.T01 | MTR_4g014370 | 44.175 | 206 | 94 | 5 | 201 | 402 | 144 | 332 | 4.20e-48 | 167 |
MsG0680035283.01.T01 | MTR_4g014370 | 52.846 | 123 | 55 | 2 | 6 | 125 | 15 | 137 | 1.57e-28 | 115 |
MsG0680035283.01.T01 | MTR_5g068490 | 35.691 | 311 | 154 | 10 | 94 | 403 | 8 | 273 | 3.02e-46 | 160 |
MsG0680035283.01.T01 | MTR_8g073570 | 50.000 | 176 | 81 | 5 | 4 | 178 | 1 | 170 | 5.00e-46 | 156 |
MsG0680035283.01.T01 | MTR_8g033000 | 33.681 | 383 | 201 | 13 | 50 | 403 | 1 | 359 | 4.03e-44 | 157 |
MsG0680035283.01.T01 | MTR_1g076810 | 42.915 | 247 | 118 | 7 | 5 | 243 | 10 | 241 | 1.70e-43 | 161 |
MsG0680035283.01.T01 | MTR_4g016000 | 41.256 | 223 | 94 | 7 | 136 | 356 | 2 | 189 | 1.87e-43 | 151 |
MsG0680035283.01.T01 | MTR_6g070880 | 40.164 | 244 | 123 | 8 | 8 | 235 | 27 | 263 | 1.73e-42 | 150 |
MsG0680035283.01.T01 | MTR_6g071420 | 40.164 | 244 | 123 | 8 | 8 | 235 | 27 | 263 | 1.73e-42 | 150 |
MsG0680035283.01.T01 | MTR_5g037190 | 40.000 | 270 | 127 | 7 | 7 | 270 | 10 | 250 | 1.12e-41 | 148 |
MsG0680035283.01.T01 | MTR_3g018750 | 38.372 | 258 | 115 | 8 | 166 | 402 | 2 | 236 | 1.33e-41 | 147 |
MsG0680035283.01.T01 | MTR_5g097820 | 40.569 | 281 | 120 | 11 | 8 | 268 | 16 | 269 | 2.69e-41 | 147 |
MsG0680035283.01.T01 | MTR_6g009350 | 41.463 | 205 | 102 | 4 | 167 | 370 | 8 | 195 | 2.07e-40 | 142 |
MsG0680035283.01.T01 | MTR_1g050308 | 41.379 | 232 | 107 | 8 | 5 | 228 | 26 | 236 | 2.31e-40 | 147 |
MsG0680035283.01.T01 | MTR_1g050308 | 41.593 | 113 | 59 | 3 | 292 | 402 | 235 | 342 | 6.25e-18 | 85.1 |
MsG0680035283.01.T01 | MTR_7g019250 | 37.190 | 242 | 116 | 6 | 145 | 384 | 206 | 413 | 5.92e-39 | 146 |
MsG0680035283.01.T01 | MTR_5g098950 | 39.565 | 230 | 91 | 7 | 133 | 362 | 90 | 271 | 9.23e-39 | 141 |
MsG0680035283.01.T01 | MTR_5g066420 | 42.581 | 155 | 83 | 1 | 242 | 396 | 1 | 149 | 2.26e-36 | 130 |
MsG0680035283.01.T01 | MTR_2g104260 | 37.329 | 292 | 143 | 9 | 3 | 274 | 4 | 275 | 1.78e-35 | 132 |
MsG0680035283.01.T01 | MTR_6g465360 | 43.284 | 201 | 93 | 8 | 5 | 190 | 54 | 248 | 3.76e-34 | 129 |
MsG0680035283.01.T01 | MTR_1g115205 | 35.938 | 256 | 125 | 7 | 1 | 251 | 17 | 238 | 6.61e-33 | 124 |
MsG0680035283.01.T01 | MTR_6g079730 | 45.714 | 140 | 69 | 1 | 264 | 403 | 14 | 146 | 7.30e-33 | 121 |
MsG0680035283.01.T01 | MTR_8g035690 | 34.340 | 265 | 123 | 11 | 167 | 403 | 58 | 299 | 9.87e-33 | 125 |
MsG0680035283.01.T01 | MTR_3g030620 | 42.945 | 163 | 85 | 4 | 240 | 401 | 21 | 176 | 5.55e-31 | 117 |
MsG0680035283.01.T01 | MTR_5g036250 | 60.227 | 88 | 34 | 1 | 318 | 405 | 23 | 109 | 2.39e-29 | 113 |
MsG0680035283.01.T01 | MTR_2g022020 | 46.341 | 123 | 57 | 3 | 279 | 401 | 1 | 114 | 4.40e-29 | 110 |
MsG0680035283.01.T01 | MTR_5g097540 | 40.523 | 153 | 71 | 4 | 211 | 362 | 97 | 230 | 3.96e-28 | 112 |
MsG0680035283.01.T01 | MTR_7g101200 | 36.709 | 237 | 99 | 11 | 132 | 364 | 39 | 228 | 5.86e-28 | 110 |
MsG0680035283.01.T01 | MTR_7g017120 | 39.545 | 220 | 107 | 9 | 194 | 401 | 55 | 260 | 2.42e-27 | 110 |
MsG0680035283.01.T01 | MTR_5g096920 | 37.888 | 161 | 84 | 3 | 242 | 401 | 1 | 146 | 3.08e-27 | 106 |
MsG0680035283.01.T01 | MTR_7g017150 | 39.819 | 221 | 106 | 9 | 194 | 401 | 55 | 261 | 5.71e-27 | 108 |
MsG0680035283.01.T01 | MTR_3g019290 | 34.597 | 211 | 92 | 6 | 10 | 217 | 11 | 178 | 1.27e-26 | 105 |
MsG0680035283.01.T01 | MTR_5g086780 | 45.378 | 119 | 61 | 3 | 265 | 383 | 114 | 228 | 5.25e-26 | 105 |
MsG0680035283.01.T01 | MTR_5g086780 | 54.167 | 72 | 27 | 1 | 4 | 75 | 7 | 72 | 2.41e-15 | 75.5 |
MsG0680035283.01.T01 | MTR_5g097660 | 41.176 | 119 | 69 | 1 | 290 | 407 | 2 | 120 | 1.95e-25 | 100 |
MsG0680035283.01.T01 | MTR_4g133170 | 25.000 | 380 | 229 | 13 | 16 | 386 | 7 | 339 | 1.10e-24 | 105 |
MsG0680035283.01.T01 | MTR_0115s0020 | 28.111 | 434 | 228 | 19 | 1 | 399 | 7 | 391 | 2.85e-22 | 98.2 |
MsG0680035283.01.T01 | MTR_0064s0160 | 26.379 | 417 | 255 | 15 | 12 | 409 | 41 | 424 | 9.35e-21 | 94.4 |
MsG0680035283.01.T01 | MTR_5g097650 | 41.026 | 156 | 62 | 8 | 6 | 149 | 13 | 150 | 1.36e-20 | 88.6 |
MsG0680035283.01.T01 | MTR_4g023080 | 26.329 | 414 | 221 | 15 | 7 | 404 | 3 | 348 | 4.69e-20 | 91.3 |
MsG0680035283.01.T01 | MTR_5g096070 | 36.957 | 184 | 66 | 7 | 4 | 175 | 14 | 159 | 4.92e-20 | 87.0 |
MsG0680035283.01.T01 | MTR_4g021785 | 28.329 | 413 | 207 | 20 | 15 | 408 | 11 | 353 | 7.48e-20 | 90.5 |
MsG0680035283.01.T01 | MTR_2g024110 | 24.398 | 332 | 203 | 11 | 13 | 340 | 4 | 291 | 5.75e-19 | 88.2 |
MsG0680035283.01.T01 | MTR_7g070440 | 28.325 | 406 | 234 | 17 | 13 | 404 | 7 | 369 | 8.95e-19 | 87.8 |
MsG0680035283.01.T01 | MTR_4g055060 | 27.353 | 340 | 185 | 16 | 16 | 343 | 33 | 322 | 9.86e-19 | 87.8 |
MsG0680035283.01.T01 | MTR_2g021150 | 25.377 | 398 | 240 | 17 | 13 | 399 | 14 | 365 | 1.30e-18 | 87.4 |
MsG0680035283.01.T01 | MTR_2g029990 | 26.196 | 397 | 229 | 19 | 16 | 399 | 54 | 399 | 1.35e-18 | 87.4 |
MsG0680035283.01.T01 | MTR_8g101580 | 26.617 | 402 | 220 | 18 | 15 | 399 | 48 | 391 | 1.80e-18 | 87.0 |
MsG0680035283.01.T01 | MTR_1g097560 | 28.291 | 357 | 193 | 19 | 10 | 361 | 33 | 331 | 2.62e-18 | 86.3 |
MsG0680035283.01.T01 | MTR_2g426060 | 25.862 | 348 | 193 | 18 | 16 | 342 | 9 | 312 | 2.74e-18 | 86.7 |
MsG0680035283.01.T01 | MTR_4g094365 | 25.750 | 400 | 240 | 12 | 12 | 403 | 7 | 357 | 2.74e-18 | 86.3 |
MsG0680035283.01.T01 | MTR_5g096050 | 44.144 | 111 | 48 | 3 | 242 | 345 | 1 | 104 | 2.82e-18 | 80.9 |
MsG0680035283.01.T01 | MTR_5g048160 | 27.553 | 421 | 246 | 22 | 1 | 399 | 1 | 384 | 3.46e-18 | 86.3 |
MsG0680035283.01.T01 | MTR_3g103020 | 26.034 | 411 | 215 | 17 | 16 | 401 | 23 | 369 | 5.22e-18 | 85.5 |
MsG0680035283.01.T01 | MTR_1g050305 | 45.545 | 101 | 49 | 3 | 290 | 385 | 4 | 103 | 9.10e-18 | 80.1 |
MsG0680035283.01.T01 | MTR_2g031720 | 24.000 | 375 | 235 | 14 | 15 | 379 | 8 | 342 | 1.37e-17 | 84.3 |
MsG0680035283.01.T01 | MTR_2g025420 | 25.797 | 345 | 207 | 12 | 16 | 342 | 9 | 322 | 2.41e-17 | 84.0 |
MsG0680035283.01.T01 | MTR_5g091150 | 33.990 | 203 | 73 | 9 | 114 | 313 | 40 | 184 | 3.15e-17 | 80.1 |
MsG0680035283.01.T01 | MTR_3g047580 | 37.584 | 149 | 67 | 5 | 1 | 145 | 1 | 127 | 3.61e-17 | 77.8 |
MsG0680035283.01.T01 | MTR_5g097210 | 24.634 | 410 | 246 | 15 | 15 | 412 | 11 | 369 | 5.90e-17 | 82.4 |
MsG0680035283.01.T01 | MTR_3g036290 | 26.891 | 357 | 197 | 17 | 16 | 370 | 25 | 319 | 6.84e-17 | 82.0 |
MsG0680035283.01.T01 | MTR_0667s0010 | 24.571 | 350 | 203 | 11 | 9 | 342 | 2 | 306 | 8.39e-17 | 82.0 |
MsG0680035283.01.T01 | MTR_4g117720 | 30.233 | 301 | 152 | 16 | 121 | 405 | 114 | 372 | 8.88e-17 | 82.0 |
MsG0680035283.01.T01 | MTR_7g079370 | 27.333 | 300 | 173 | 13 | 115 | 401 | 80 | 347 | 9.83e-17 | 81.6 |
MsG0680035283.01.T01 | MTR_1g050542 | 26.738 | 374 | 203 | 16 | 15 | 379 | 60 | 371 | 2.33e-16 | 80.9 |
MsG0680035283.01.T01 | MTR_2g021155 | 26.735 | 389 | 218 | 14 | 16 | 390 | 39 | 374 | 2.37e-16 | 82.0 |
MsG0680035283.01.T01 | MTR_4g023130 | 25.000 | 412 | 188 | 15 | 7 | 404 | 3 | 307 | 2.56e-16 | 79.7 |
MsG0680035283.01.T01 | MTR_1g068835 | 26.970 | 330 | 195 | 14 | 16 | 343 | 7 | 292 | 2.85e-16 | 80.5 |
MsG0680035283.01.T01 | MTR_4g094400 | 40.310 | 129 | 49 | 4 | 240 | 357 | 8 | 119 | 3.29e-16 | 75.1 |
MsG0680035283.01.T01 | MTR_1g097490 | 27.749 | 382 | 215 | 18 | 1 | 375 | 37 | 364 | 4.73e-16 | 79.7 |
MsG0680035283.01.T01 | MTR_2g026010 | 25.203 | 369 | 200 | 21 | 32 | 377 | 23 | 338 | 4.98e-16 | 79.7 |
MsG0680035283.01.T01 | MTR_5g057790 | 26.012 | 346 | 183 | 14 | 16 | 347 | 49 | 335 | 5.40e-16 | 79.7 |
MsG0680035283.01.T01 | MTR_7g055870 | 24.667 | 450 | 233 | 21 | 1 | 386 | 1 | 408 | 5.46e-16 | 79.7 |
MsG0680035283.01.T01 | MTR_2g028110 | 25.936 | 374 | 223 | 18 | 16 | 379 | 7 | 336 | 6.17e-16 | 79.3 |
MsG0680035283.01.T01 | MTR_5g057710 | 26.012 | 346 | 189 | 14 | 16 | 350 | 49 | 338 | 6.52e-16 | 79.3 |
MsG0680035283.01.T01 | MTR_1g061330 | 23.888 | 427 | 252 | 17 | 1 | 414 | 1 | 367 | 7.70e-16 | 79.0 |
MsG0680035283.01.T01 | MTR_2g028130 | 23.768 | 345 | 224 | 13 | 9 | 343 | 1 | 316 | 1.29e-15 | 78.6 |
MsG0680035283.01.T01 | MTR_6g065980 | 25.301 | 332 | 175 | 13 | 16 | 340 | 19 | 284 | 2.39e-15 | 77.4 |
MsG0680035283.01.T01 | MTR_7g407070 | 28.613 | 346 | 201 | 14 | 10 | 340 | 21 | 335 | 2.70e-15 | 77.4 |
MsG0680035283.01.T01 | MTR_4g117850 | 24.814 | 403 | 237 | 15 | 12 | 401 | 22 | 371 | 3.62e-15 | 77.0 |
MsG0680035283.01.T01 | MTR_7g055930 | 24.503 | 453 | 230 | 21 | 1 | 386 | 1 | 408 | 4.11e-15 | 77.0 |
MsG0680035283.01.T01 | MTR_4g122850 | 26.076 | 395 | 224 | 17 | 24 | 401 | 12 | 355 | 4.45e-15 | 76.6 |
MsG0680035283.01.T01 | MTR_2g055970 | 27.586 | 348 | 188 | 15 | 5 | 342 | 203 | 496 | 9.69e-15 | 76.6 |
MsG0680035283.01.T01 | MTR_3g097190 | 55.738 | 61 | 27 | 0 | 320 | 380 | 21 | 81 | 1.00e-14 | 72.4 |
MsG0680035283.01.T01 | MTR_6g016285 | 24.138 | 435 | 241 | 19 | 13 | 399 | 21 | 414 | 2.24e-14 | 75.1 |
MsG0680035283.01.T01 | MTR_3g014540 | 24.331 | 411 | 231 | 17 | 13 | 401 | 29 | 381 | 2.34e-14 | 74.7 |
MsG0680035283.01.T01 | MTR_2g021190 | 27.665 | 394 | 227 | 21 | 16 | 399 | 24 | 369 | 4.37e-14 | 73.6 |
MsG0680035283.01.T01 | MTR_1g097330 | 27.577 | 388 | 211 | 20 | 15 | 387 | 18 | 350 | 5.21e-14 | 73.6 |
MsG0680035283.01.T01 | MTR_2g028160 | 24.719 | 356 | 207 | 17 | 9 | 342 | 1 | 317 | 6.51e-14 | 73.6 |
MsG0680035283.01.T01 | MTR_4g117770 | 24.816 | 407 | 231 | 13 | 12 | 401 | 10 | 358 | 9.14e-14 | 72.8 |
MsG0680035283.01.T01 | MTR_4g117810 | 24.816 | 407 | 231 | 13 | 12 | 401 | 10 | 358 | 9.14e-14 | 72.8 |
MsG0680035283.01.T01 | MTR_5g011200 | 24.586 | 362 | 219 | 14 | 16 | 372 | 20 | 332 | 9.49e-14 | 72.8 |
MsG0680035283.01.T01 | MTR_3g013770 | 26.077 | 418 | 215 | 17 | 16 | 401 | 36 | 391 | 1.26e-13 | 72.4 |
MsG0680035283.01.T01 | MTR_8g041440 | 53.623 | 69 | 30 | 1 | 4 | 70 | 6 | 74 | 1.41e-13 | 67.4 |
MsG0680035283.01.T01 | MTR_2g046900 | 24.603 | 378 | 219 | 19 | 15 | 374 | 30 | 359 | 1.54e-13 | 72.0 |
MsG0680035283.01.T01 | MTR_4g121580 | 25.248 | 404 | 206 | 18 | 14 | 399 | 13 | 338 | 1.71e-13 | 72.0 |
MsG0680035283.01.T01 | MTR_6g053260 | 26.570 | 414 | 203 | 22 | 3 | 384 | 324 | 668 | 2.01e-13 | 72.8 |
MsG0680035283.01.T01 | MTR_3g010590 | 25.000 | 332 | 177 | 13 | 16 | 340 | 42 | 308 | 3.27e-13 | 71.2 |
MsG0680035283.01.T01 | MTR_4g023090 | 26.044 | 407 | 216 | 20 | 7 | 396 | 10 | 348 | 3.33e-13 | 71.2 |
MsG0680035283.01.T01 | MTR_5g070130 | 23.278 | 421 | 271 | 13 | 5 | 413 | 3 | 383 | 3.65e-13 | 70.9 |
MsG0680035283.01.T01 | MTR_4g024890 | 23.628 | 419 | 237 | 17 | 15 | 399 | 12 | 381 | 3.78e-13 | 70.9 |
MsG0680035283.01.T01 | MTR_0044s0300 | 26.142 | 394 | 192 | 21 | 5 | 372 | 26 | 346 | 3.96e-13 | 70.9 |
MsG0680035283.01.T01 | MTR_1g054575 | 26.225 | 347 | 168 | 15 | 15 | 342 | 54 | 331 | 4.28e-13 | 71.6 |
MsG0680035283.01.T01 | MTR_3g009260 | 25.532 | 329 | 185 | 14 | 16 | 340 | 44 | 316 | 4.99e-13 | 70.5 |
MsG0680035283.01.T01 | MTR_4g070550 | 24.234 | 359 | 203 | 17 | 9 | 342 | 1 | 315 | 6.41e-13 | 70.5 |
MsG0680035283.01.T01 | MTR_3g034130 | 24.750 | 400 | 217 | 15 | 8 | 380 | 4 | 346 | 7.54e-13 | 69.7 |
MsG0680035283.01.T01 | MTR_1g037540 | 23.310 | 429 | 211 | 19 | 16 | 384 | 8 | 378 | 1.01e-12 | 69.7 |
MsG0680035283.01.T01 | MTR_2g046830 | 26.627 | 338 | 182 | 16 | 15 | 342 | 27 | 308 | 1.12e-12 | 69.7 |
MsG0680035283.01.T01 | MTR_3g007410 | 27.520 | 367 | 188 | 21 | 21 | 370 | 60 | 365 | 1.25e-12 | 69.3 |
MsG0680035283.01.T01 | MTR_3g030330 | 29.520 | 271 | 132 | 14 | 120 | 384 | 123 | 340 | 1.39e-12 | 68.9 |
MsG0680035283.01.T01 | MTR_3g014570 | 23.866 | 419 | 223 | 15 | 8 | 391 | 15 | 372 | 1.46e-12 | 68.9 |
MsG0680035283.01.T01 | MTR_3g007430 | 24.923 | 325 | 194 | 13 | 21 | 342 | 51 | 328 | 1.49e-12 | 68.9 |
MsG0680035283.01.T01 | MTR_2g426020 | 22.443 | 352 | 209 | 14 | 9 | 342 | 2 | 307 | 2.69e-12 | 68.6 |
MsG0680035283.01.T01 | MTR_7g013590 | 24.939 | 413 | 225 | 18 | 16 | 405 | 39 | 389 | 3.23e-12 | 68.2 |
MsG0680035283.01.T01 | MTR_4g109270 | 22.794 | 408 | 230 | 12 | 16 | 401 | 11 | 355 | 4.99e-12 | 67.4 |
MsG0680035283.01.T01 | MTR_2g426070 | 21.918 | 365 | 234 | 12 | 21 | 368 | 14 | 344 | 5.19e-12 | 67.4 |
MsG0680035283.01.T01 | MTR_3g006670 | 25.680 | 331 | 196 | 12 | 16 | 342 | 52 | 336 | 6.34e-12 | 67.4 |
MsG0680035283.01.T01 | MTR_3g036335 | 23.784 | 370 | 214 | 17 | 16 | 375 | 44 | 355 | 6.76e-12 | 67.0 |
MsG0680035283.01.T01 | MTR_5g094360 | 38.532 | 109 | 58 | 5 | 141 | 246 | 40 | 142 | 7.03e-12 | 63.5 |
MsG0680035283.01.T01 | MTR_2g021050 | 25.182 | 413 | 221 | 21 | 16 | 402 | 8 | 358 | 7.04e-12 | 67.0 |
MsG0680035283.01.T01 | MTR_3g011060 | 24.629 | 337 | 201 | 11 | 16 | 342 | 31 | 324 | 8.64e-12 | 66.6 |
MsG0680035283.01.T01 | MTR_3g436150 | 26.849 | 365 | 218 | 16 | 16 | 372 | 35 | 358 | 1.02e-11 | 66.6 |
MsG0680035283.01.T01 | MTR_4g116340 | 30.544 | 239 | 115 | 11 | 16 | 248 | 39 | 232 | 1.41e-11 | 64.7 |
MsG0680035283.01.T01 | MTR_0760s0010 | 23.724 | 392 | 226 | 14 | 21 | 399 | 55 | 386 | 1.41e-11 | 66.2 |
MsG0680035283.01.T01 | MTR_4g061340 | 24.713 | 348 | 200 | 13 | 16 | 352 | 29 | 325 | 1.58e-11 | 65.9 |
MsG0680035283.01.T01 | MTR_3g007360 | 27.941 | 340 | 168 | 20 | 21 | 343 | 60 | 339 | 1.69e-11 | 65.9 |
MsG0680035283.01.T01 | MTR_2g046800 | 24.027 | 437 | 243 | 17 | 2 | 399 | 3 | 389 | 2.23e-11 | 65.5 |
MsG0680035283.01.T01 | MTR_2g031680 | 23.873 | 377 | 234 | 16 | 9 | 377 | 2 | 333 | 2.71e-11 | 65.1 |
MsG0680035283.01.T01 | MTR_3g011100 | 25.519 | 337 | 192 | 12 | 16 | 342 | 238 | 525 | 3.00e-11 | 65.9 |
MsG0680035283.01.T01 | MTR_1g068860 | 25.893 | 336 | 193 | 15 | 16 | 343 | 7 | 294 | 3.00e-11 | 65.1 |
MsG0680035283.01.T01 | MTR_3g009250 | 27.004 | 237 | 130 | 10 | 16 | 248 | 44 | 241 | 3.86e-11 | 63.5 |
MsG0680035283.01.T01 | MTR_3g058470 | 28.696 | 230 | 116 | 11 | 16 | 229 | 40 | 237 | 3.95e-11 | 64.7 |
MsG0680035283.01.T01 | MTR_2g024100 | 24.011 | 354 | 204 | 17 | 28 | 359 | 22 | 332 | 5.76e-11 | 64.3 |
MsG0680035283.01.T01 | MTR_4g031770 | 26.513 | 347 | 195 | 16 | 11 | 350 | 2 | 295 | 7.07e-11 | 63.9 |
MsG0680035283.01.T01 | MTR_2g031640 | 22.400 | 375 | 231 | 17 | 16 | 377 | 9 | 336 | 9.71e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035283.01.T01 | AT3G06240 | 25.735 | 408 | 221 | 18 | 16 | 386 | 39 | 401 | 1.12e-13 | 72.8 |
MsG0680035283.01.T01 | AT4G12560 | 23.797 | 395 | 233 | 14 | 13 | 385 | 4 | 352 | 2.04e-12 | 68.9 |
MsG0680035283.01.T01 | AT4G12560 | 23.797 | 395 | 233 | 14 | 13 | 385 | 4 | 352 | 2.04e-12 | 68.9 |
MsG0680035283.01.T01 | AT4G12560 | 23.797 | 395 | 233 | 14 | 13 | 385 | 4 | 352 | 2.04e-12 | 68.9 |
Find 86 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAACTATTGACGAATTTA+AGG | 0.149555 | 6:-101500887 | MsG0680035283.01.T01:CDS |
TTCATTCTTGGGCCCTTTCC+TGG | 0.198609 | 6:-101500277 | MsG0680035283.01.T01:CDS |
TTTGAGAATAAAGTCAAATT+AGG | 0.247221 | 6:-101501018 | MsG0680035283.01.T01:CDS |
ATGAAGGAGCTTGGTATTAA+AGG | 0.250423 | 6:-101500160 | MsG0680035283.01.T01:CDS |
CGGTACAAATTCATGAAAAT+AGG | 0.270361 | 6:+101501156 | None:intergenic |
TAGGTTCGCCACCTCTGTTC+AGG | 0.281198 | 6:-101500999 | MsG0680035283.01.T01:CDS |
TGGACTAAACTCTTCATTCT+TGG | 0.283281 | 6:-101500289 | MsG0680035283.01.T01:CDS |
GTGAAATGGCTTCATGGATT+TGG | 0.296766 | 6:-101500808 | MsG0680035283.01.T01:CDS |
CCTGGCATTGATCATCCTAT+TGG | 0.300230 | 6:-101500259 | MsG0680035283.01.T01:CDS |
CTCTTGGAGGAAACTTGATT+TGG | 0.301637 | 6:-101500638 | MsG0680035283.01.T01:CDS |
TACCAAGCTCCTTCATCATC+TGG | 0.329052 | 6:+101500167 | None:intergenic |
TGACTATGATTTGATGGATA+TGG | 0.352234 | 6:+101501069 | None:intergenic |
GGACTAAACTCTTCATTCTT+GGG | 0.353699 | 6:-101500288 | MsG0680035283.01.T01:CDS |
TCCTCCAAGAGTTACTTCTT+AGG | 0.365335 | 6:+101500650 | None:intergenic |
TATAGGCAATTTCGAAAGAA+TGG | 0.366601 | 6:+101501236 | None:intergenic |
ACCTTAAATTCGTCAATAGT+TGG | 0.373639 | 6:+101500886 | None:intergenic |
CCATTCTTTCCCTCTCCAAT+AGG | 0.377511 | 6:+101500244 | None:intergenic |
AACACATGACTATGATTTGA+TGG | 0.389879 | 6:+101501063 | None:intergenic |
TGAAGGAGCTTGGTATTAAA+GGG | 0.396996 | 6:-101500159 | MsG0680035283.01.T01:CDS |
GTAGTACAAATGTTGTATTA+TGG | 0.397281 | 6:-101500912 | MsG0680035283.01.T01:CDS |
ATTAAAGTGAAATGGCTTCA+TGG | 0.409662 | 6:-101500814 | MsG0680035283.01.T01:CDS |
GGATTCTCTTTCAACTGAAA+AGG | 0.419666 | 6:-101501292 | MsG0680035283.01.T01:CDS |
AGGGAAAAGGCATTGTTGTC+AGG | 0.430002 | 6:-101500140 | MsG0680035283.01.T01:CDS |
ATATTGGGTCCCGTTATTAA+CGG | 0.441956 | 6:-101500955 | MsG0680035283.01.T01:CDS |
CATAAGAGATGATAAAGAAC+TGG | 0.442741 | 6:-101500209 | MsG0680035283.01.T01:CDS |
TTATTCCTCCAATGGGAAGA+TGG | 0.453988 | 6:+101500060 | None:intergenic |
AAAACAATTCCGTTAATAAC+GGG | 0.454484 | 6:+101500946 | None:intergenic |
CAACCATTTATTCCTCCAAT+GGG | 0.461615 | 6:+101500053 | None:intergenic |
TGGATATGCCTTGTGGTATG+AGG | 0.461999 | 6:-101500618 | MsG0680035283.01.T01:CDS |
AGGTTCGCCACCTCTGTTCA+GGG | 0.462359 | 6:-101500998 | MsG0680035283.01.T01:CDS |
TCATGCTAGAGATGACTATA+AGG | 0.472121 | 6:-101500779 | MsG0680035283.01.T01:CDS |
TCAACCATTTATTCCTCCAA+TGG | 0.474018 | 6:+101500052 | None:intergenic |
ACTAATTCAGTTGGGCTTCG+AGG | 0.477496 | 6:+101500859 | None:intergenic |
GCCTAAGAAGTAACTCTTGG+AGG | 0.478592 | 6:-101500651 | MsG0680035283.01.T01:CDS |
ACAGCCTAAGAAGTAACTCT+TGG | 0.489810 | 6:-101500654 | MsG0680035283.01.T01:CDS |
AAAATTGATATGTGAAAAGT+AGG | 0.490383 | 6:+101500337 | None:intergenic |
ATGTGAGATGAGACACTTGA+TGG | 0.491667 | 6:-101500404 | MsG0680035283.01.T01:CDS |
TTAGTTCCGTAAGTAAATCA+TGG | 0.495085 | 6:-101501197 | MsG0680035283.01.T01:CDS |
GACGACCGTACTAATTCAGT+TGG | 0.504761 | 6:+101500850 | None:intergenic |
AGCTTGGTATTAAAGGGAAA+AGG | 0.506980 | 6:-101500153 | MsG0680035283.01.T01:CDS |
CCTATTGGAGAGGGAAAGAA+TGG | 0.508275 | 6:-101500244 | MsG0680035283.01.T01:CDS |
GCAAGACCATGATTTACTTA+CGG | 0.515781 | 6:+101501191 | None:intergenic |
GGATGATCAATGCCAGGAAA+GGG | 0.518687 | 6:+101500265 | None:intergenic |
TTGTCAGGTAGTCATTTACA+AGG | 0.523582 | 6:-101500125 | MsG0680035283.01.T01:CDS |
AAAATTATCAATCAAAGTTG+AGG | 0.524428 | 6:+101500456 | None:intergenic |
AAGAAAAGCCATCTTCCCAT+TGG | 0.525662 | 6:-101500068 | MsG0680035283.01.T01:CDS |
GCGTGTCACGCGACGATGTG+TGG | 0.530154 | 6:-101500684 | MsG0680035283.01.T01:CDS |
ACCAAGCTCCTTCATCATCT+GGG | 0.535447 | 6:+101500168 | None:intergenic |
AGGATGATCAATGCCAGGAA+AGG | 0.539211 | 6:+101500264 | None:intergenic |
ATTCAGTTGGGCTTCGAGGA+AGG | 0.543159 | 6:+101500863 | None:intergenic |
AAATTATCAATCAAAGTTGA+GGG | 0.543167 | 6:+101500457 | None:intergenic |
ACCCAGATGATGAAGGAGCT+TGG | 0.544850 | 6:-101500169 | MsG0680035283.01.T01:CDS |
AAAAGCCATCTTCCCATTGG+AGG | 0.548042 | 6:-101500065 | MsG0680035283.01.T01:CDS |
ATAATACAACATTTGTACTA+CGG | 0.550000 | 6:+101500914 | None:intergenic |
ACTTGAACGGAGTGTGTCAT+TGG | 0.552147 | 6:-101500573 | MsG0680035283.01.T01:CDS |
AAGTTGGTGTGAAGGAGTCT+TGG | 0.554665 | 6:-101500309 | MsG0680035283.01.T01:CDS |
CCAATAGGATGATCAATGCC+AGG | 0.555106 | 6:+101500259 | None:intergenic |
ATGGCAGAGTCTGTTGGAGG+AGG | 0.555288 | 6:+101501088 | None:intergenic |
ACGACCGTACTAATTCAGTT+GGG | 0.557312 | 6:+101500851 | None:intergenic |
ATGGATATGGCAGAGTCTGT+TGG | 0.558014 | 6:+101501082 | None:intergenic |
CATGAGAACCCAGATGATGA+AGG | 0.560629 | 6:-101500176 | MsG0680035283.01.T01:CDS |
GGTGTCATTTGACTTAAGCA+TGG | 0.563150 | 6:-101500503 | MsG0680035283.01.T01:CDS |
TTTGGGTGAAGTTGGTGTGA+AGG | 0.573635 | 6:-101500317 | MsG0680035283.01.T01:CDS |
ATATGTGAAAAGTAGGCGAC+TGG | 0.573933 | 6:+101500344 | None:intergenic |
TTCAGGGAGTGTAACAACCC+TGG | 0.591612 | 6:-101500982 | MsG0680035283.01.T01:CDS |
TTTCATATCCGATGCTTACG+AGG | 0.602460 | 6:-101501127 | MsG0680035283.01.T01:CDS |
TGAACGGAGTGTGTCATTGG+TGG | 0.602651 | 6:-101500570 | MsG0680035283.01.T01:CDS |
ACGGGACCCAATATAAAACC+AGG | 0.608292 | 6:+101500964 | None:intergenic |
ATTGATCATCCTATTGGAGA+GGG | 0.612990 | 6:-101500253 | MsG0680035283.01.T01:CDS |
ACCATCGTCCTCGTAAGCAT+CGG | 0.616779 | 6:+101501119 | None:intergenic |
GATATGGCAGAGTCTGTTGG+AGG | 0.618050 | 6:+101501085 | None:intergenic |
GAAGCCCAACTGAATTAGTA+CGG | 0.618527 | 6:-101500855 | MsG0680035283.01.T01:CDS |
TGTGGTATGAGGACTTATGT+AGG | 0.629716 | 6:-101500607 | MsG0680035283.01.T01:CDS |
CATTGATCATCCTATTGGAG+AGG | 0.637936 | 6:-101500254 | MsG0680035283.01.T01:CDS |
CGTGTCACGCGACGATGTGT+GGG | 0.638694 | 6:-101500683 | MsG0680035283.01.T01:CDS |
GGTGTCTATGTGTACTTGAA+CGG | 0.641194 | 6:-101500586 | MsG0680035283.01.T01:CDS |
GATAGTGACTCTGAAATCGA+TGG | 0.644463 | 6:-101500706 | MsG0680035283.01.T01:CDS |
CTTGATTTGGATATGCCTTG+TGG | 0.655058 | 6:-101500625 | MsG0680035283.01.T01:CDS |
TTACACTCCCTGAACAGAGG+TGG | 0.663513 | 6:+101500991 | None:intergenic |
CATCGGATATGAAACTGTTG+CGG | 0.672892 | 6:+101501136 | None:intergenic |
ATACAACATTTGTACTACGG+TGG | 0.684173 | 6:+101500917 | None:intergenic |
TTGTTACACTCCCTGAACAG+AGG | 0.700477 | 6:+101500988 | None:intergenic |
TCCGATGCTTACGAGGACGA+TGG | 0.703034 | 6:-101501120 | MsG0680035283.01.T01:CDS |
CGGGACCCAATATAAAACCA+GGG | 0.717616 | 6:+101500965 | None:intergenic |
GTCATTTGACTTAAGCATGG+AGG | 0.720737 | 6:-101500500 | MsG0680035283.01.T01:CDS |
ACATAAGTCCTCATACCACA+AGG | 0.720975 | 6:+101500610 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTGTTTTTGAAAGAAA+GGG | + | Chr6:101501266-101501285 | None:intergenic | 15.0% |
!!! | TTTTTTTGTTTTTGAAAGAA+AGG | + | Chr6:101501267-101501286 | None:intergenic | 15.0% |
!! | AAAAACAATTCCGTTAATAA+CGG | + | Chr6:101500412-101500431 | None:intergenic | 20.0% |
!! | AAAATTATCAATCAAAGTTG+AGG | + | Chr6:101500901-101500920 | None:intergenic | 20.0% |
!! | AAAATTGATATGTGAAAAGT+AGG | + | Chr6:101501020-101501039 | None:intergenic | 20.0% |
!! | AAATTATCAATCAAAGTTGA+GGG | + | Chr6:101500900-101500919 | None:intergenic | 20.0% |
!! | AATATGATAAAAAAGCAATG+TGG | + | Chr6:101500986-101501005 | None:intergenic | 20.0% |
!! | ATAATACAACATTTGTACTA+CGG | + | Chr6:101500443-101500462 | None:intergenic | 20.0% |
!! | TTTGAGAATAAAGTCAAATT+AGG | - | Chr6:101500336-101500355 | MsG0680035283.01.T01:CDS | 20.0% |
!!! | AATCGTTTCAAAGATTTTAT+AGG | + | Chr6:101500138-101500157 | None:intergenic | 20.0% |
!!! | ACTTTTCACATATCAATTTT+GGG | - | Chr6:101501020-101501039 | MsG0680035283.01.T01:CDS | 20.0% |
!!! | TACTTTTCACATATCAATTT+TGG | - | Chr6:101501019-101501038 | MsG0680035283.01.T01:CDS | 20.0% |
!!! | TTGATTGATAATTTTGATTC+TGG | - | Chr6:101500906-101500925 | MsG0680035283.01.T01:CDS | 20.0% |
! | AAAACAATTCCGTTAATAAC+GGG | + | Chr6:101500411-101500430 | None:intergenic | 25.0% |
! | GTAGTACAAATGTTGTATTA+TGG | - | Chr6:101500442-101500461 | MsG0680035283.01.T01:CDS | 25.0% |
!!! | GTTTTGAGATTAAAGTGAAA+TGG | - | Chr6:101500532-101500551 | MsG0680035283.01.T01:CDS | 25.0% |
!!! | TTATGATGAAGAAGCATTTT+TGG | - | Chr6:101500830-101500849 | MsG0680035283.01.T01:CDS | 25.0% |
AACACATGACTATGATTTGA+TGG | + | Chr6:101500294-101500313 | None:intergenic | 30.0% | |
ACCTTAAATTCGTCAATAGT+TGG | + | Chr6:101500471-101500490 | None:intergenic | 30.0% | |
ATTAAAGTGAAATGGCTTCA+TGG | - | Chr6:101500540-101500559 | MsG0680035283.01.T01:CDS | 30.0% | |
CATAAGAGATGATAAAGAAC+TGG | - | Chr6:101501145-101501164 | MsG0680035283.01.T01:CDS | 30.0% | |
CGGTACAAATTCATGAAAAT+AGG | + | Chr6:101500201-101500220 | None:intergenic | 30.0% | |
TATAGGCAATTTCGAAAGAA+TGG | + | Chr6:101500121-101500140 | None:intergenic | 30.0% | |
TCCAACTATTGACGAATTTA+AGG | - | Chr6:101500467-101500486 | MsG0680035283.01.T01:CDS | 30.0% | |
TTAGTTCCGTAAGTAAATCA+TGG | - | Chr6:101500157-101500176 | MsG0680035283.01.T01:CDS | 30.0% | |
! | TGACTATGATTTGATGGATA+TGG | + | Chr6:101500288-101500307 | None:intergenic | 30.0% |
!! | ATATCAATTTTGGGTGAAGT+TGG | - | Chr6:101501029-101501048 | MsG0680035283.01.T01:CDS | 30.0% |
!! | CATGTGTTGTATTTGCTTTT+TGG | - | Chr6:101500306-101500325 | MsG0680035283.01.T01:CDS | 30.0% |
!! | TTTTTGAAAGAAAGGGAAGA+TGG | + | Chr6:101501259-101501278 | None:intergenic | 30.0% |
!!! | AACAACCCTGGTTTTATATT+GGG | - | Chr6:101500384-101500403 | MsG0680035283.01.T01:CDS | 30.0% |
!!! | TAACAACCCTGGTTTTATAT+TGG | - | Chr6:101500383-101500402 | MsG0680035283.01.T01:CDS | 30.0% |
AGCTTGGTATTAAAGGGAAA+AGG | - | Chr6:101501201-101501220 | MsG0680035283.01.T01:CDS | 35.0% | |
ATACAACATTTGTACTACGG+TGG | + | Chr6:101500440-101500459 | None:intergenic | 35.0% | |
ATATTGGGTCCCGTTATTAA+CGG | - | Chr6:101500399-101500418 | MsG0680035283.01.T01:CDS | 35.0% | |
ATGAAGGAGCTTGGTATTAA+AGG | - | Chr6:101501194-101501213 | MsG0680035283.01.T01:CDS | 35.0% | |
ATTGATCATCCTATTGGAGA+GGG | - | Chr6:101501101-101501120 | MsG0680035283.01.T01:CDS | 35.0% | |
GCAAGACCATGATTTACTTA+CGG | + | Chr6:101500166-101500185 | None:intergenic | 35.0% | |
GGACTAAACTCTTCATTCTT+GGG | - | Chr6:101501066-101501085 | MsG0680035283.01.T01:CDS | 35.0% | |
GGATTCTCTTTCAACTGAAA+AGG | - | Chr6:101500062-101500081 | MsG0680035283.01.T01:CDS | 35.0% | |
TCATGCTAGAGATGACTATA+AGG | - | Chr6:101500575-101500594 | MsG0680035283.01.T01:CDS | 35.0% | |
TGAAGGAGCTTGGTATTAAA+GGG | - | Chr6:101501195-101501214 | MsG0680035283.01.T01:CDS | 35.0% | |
TGGACTAAACTCTTCATTCT+TGG | - | Chr6:101501065-101501084 | MsG0680035283.01.T01:CDS | 35.0% | |
TTGTCAGGTAGTCATTTACA+AGG | - | Chr6:101501229-101501248 | MsG0680035283.01.T01:CDS | 35.0% | |
!!! | TGTATTTGCTTTTTGGTGAG+AGG | - | Chr6:101500313-101500332 | MsG0680035283.01.T01:CDS | 35.0% |
AAGAAAAGCCATCTTCCCAT+TGG | - | Chr6:101501286-101501305 | MsG0680035283.01.T01:CDS | 40.0% | |
ACAGCCTAAGAAGTAACTCT+TGG | - | Chr6:101500700-101500719 | MsG0680035283.01.T01:CDS | 40.0% | |
ACATAAGTCCTCATACCACA+AGG | + | Chr6:101500747-101500766 | None:intergenic | 40.0% | |
ACGACCGTACTAATTCAGTT+GGG | + | Chr6:101500506-101500525 | None:intergenic | 40.0% | |
ATATGTGAAAAGTAGGCGAC+TGG | + | Chr6:101501013-101501032 | None:intergenic | 40.0% | |
ATGTGAGATGAGACACTTGA+TGG | - | Chr6:101500950-101500969 | MsG0680035283.01.T01:CDS | 40.0% | |
CATCGGATATGAAACTGTTG+CGG | + | Chr6:101500221-101500240 | None:intergenic | 40.0% | |
CATTGATCATCCTATTGGAG+AGG | - | Chr6:101501100-101501119 | MsG0680035283.01.T01:CDS | 40.0% | |
CTCTTGGAGGAAACTTGATT+TGG | - | Chr6:101500716-101500735 | MsG0680035283.01.T01:CDS | 40.0% | |
GAAGCCCAACTGAATTAGTA+CGG | - | Chr6:101500499-101500518 | MsG0680035283.01.T01:CDS | 40.0% | |
GGTGTCTATGTGTACTTGAA+CGG | - | Chr6:101500768-101500787 | MsG0680035283.01.T01:CDS | 40.0% | |
GTGAAATGGCTTCATGGATT+TGG | - | Chr6:101500546-101500565 | MsG0680035283.01.T01:CDS | 40.0% | |
TCCTCCAAGAGTTACTTCTT+AGG | + | Chr6:101500707-101500726 | None:intergenic | 40.0% | |
TGTGGTATGAGGACTTATGT+AGG | - | Chr6:101500747-101500766 | MsG0680035283.01.T01:CDS | 40.0% | |
TTATTCCTCCAATGGGAAGA+TGG | + | Chr6:101501297-101501316 | None:intergenic | 40.0% | |
TTTCATATCCGATGCTTACG+AGG | - | Chr6:101500227-101500246 | MsG0680035283.01.T01:CDS | 40.0% | |
! | GTCATTTGACTTAAGCATGG+AGG | - | Chr6:101500854-101500873 | MsG0680035283.01.T01:CDS | 40.0% |
!! | CTTGATTTGGATATGCCTTG+TGG | - | Chr6:101500729-101500748 | MsG0680035283.01.T01:CDS | 40.0% |
!! | GATAGTGACTCTGAAATCGA+TGG | - | Chr6:101500648-101500667 | MsG0680035283.01.T01:CDS | 40.0% |
!! | GGTGTCATTTGACTTAAGCA+TGG | - | Chr6:101500851-101500870 | MsG0680035283.01.T01:CDS | 40.0% |
AAAAGCCATCTTCCCATTGG+AGG | - | Chr6:101501289-101501308 | MsG0680035283.01.T01:CDS | 45.0% | |
ACCAAGCTCCTTCATCATCT+GGG | + | Chr6:101501189-101501208 | None:intergenic | 45.0% | |
ACGGGACCCAATATAAAACC+AGG | + | Chr6:101500393-101500412 | None:intergenic | 45.0% | |
ACTAATTCAGTTGGGCTTCG+AGG | + | Chr6:101500498-101500517 | None:intergenic | 45.0% | |
ACTTGAACGGAGTGTGTCAT+TGG | - | Chr6:101500781-101500800 | MsG0680035283.01.T01:CDS | 45.0% | |
AGGATGATCAATGCCAGGAA+AGG | + | Chr6:101501093-101501112 | None:intergenic | 45.0% | |
ATGGATATGGCAGAGTCTGT+TGG | + | Chr6:101500275-101500294 | None:intergenic | 45.0% | |
CATGAGAACCCAGATGATGA+AGG | - | Chr6:101501178-101501197 | MsG0680035283.01.T01:CDS | 45.0% | |
CCAATAGGATGATCAATGCC+AGG | + | Chr6:101501098-101501117 | None:intergenic | 45.0% | |
CCATTCTTTCCCTCTCCAAT+AGG | + | Chr6:101501113-101501132 | None:intergenic | 45.0% | |
CCTATTGGAGAGGGAAAGAA+TGG | - | Chr6:101501110-101501129 | MsG0680035283.01.T01:CDS | 45.0% | |
CGGGACCCAATATAAAACCA+GGG | + | Chr6:101500392-101500411 | None:intergenic | 45.0% | |
GACGACCGTACTAATTCAGT+TGG | + | Chr6:101500507-101500526 | None:intergenic | 45.0% | |
GCCTAAGAAGTAACTCTTGG+AGG | - | Chr6:101500703-101500722 | MsG0680035283.01.T01:CDS | 45.0% | |
GGATGATCAATGCCAGGAAA+GGG | + | Chr6:101501092-101501111 | None:intergenic | 45.0% | |
TACCAAGCTCCTTCATCATC+TGG | + | Chr6:101501190-101501209 | None:intergenic | 45.0% | |
TGGATATGCCTTGTGGTATG+AGG | - | Chr6:101500736-101500755 | MsG0680035283.01.T01:CDS | 45.0% | |
TTGTTACACTCCCTGAACAG+AGG | + | Chr6:101500369-101500388 | None:intergenic | 45.0% | |
!! | AAGTTGGTGTGAAGGAGTCT+TGG | - | Chr6:101501045-101501064 | MsG0680035283.01.T01:CDS | 45.0% |
!! | AGGGAAAAGGCATTGTTGTC+AGG | - | Chr6:101501214-101501233 | MsG0680035283.01.T01:CDS | 45.0% |
!! | CCTGGCATTGATCATCCTAT+TGG | - | Chr6:101501095-101501114 | MsG0680035283.01.T01:CDS | 45.0% |
!! | TTTGGGTGAAGTTGGTGTGA+AGG | - | Chr6:101501037-101501056 | MsG0680035283.01.T01:CDS | 45.0% |
ACCATCGTCCTCGTAAGCAT+CGG | + | Chr6:101500238-101500257 | None:intergenic | 50.0% | |
ACCCAGATGATGAAGGAGCT+TGG | - | Chr6:101501185-101501204 | MsG0680035283.01.T01:CDS | 50.0% | |
ATTCAGTTGGGCTTCGAGGA+AGG | + | Chr6:101500494-101500513 | None:intergenic | 50.0% | |
GATATGGCAGAGTCTGTTGG+AGG | + | Chr6:101500272-101500291 | None:intergenic | 50.0% | |
TTACACTCCCTGAACAGAGG+TGG | + | Chr6:101500366-101500385 | None:intergenic | 50.0% | |
TTCATTCTTGGGCCCTTTCC+TGG | - | Chr6:101501077-101501096 | MsG0680035283.01.T01:CDS | 50.0% | |
! | TGAACGGAGTGTGTCATTGG+TGG | - | Chr6:101500784-101500803 | MsG0680035283.01.T01:CDS | 50.0% |
! | TTCAGGGAGTGTAACAACCC+TGG | - | Chr6:101500372-101500391 | MsG0680035283.01.T01:CDS | 50.0% |
AGGTTCGCCACCTCTGTTCA+GGG | - | Chr6:101500356-101500375 | MsG0680035283.01.T01:CDS | 55.0% | |
ATGGCAGAGTCTGTTGGAGG+AGG | + | Chr6:101500269-101500288 | None:intergenic | 55.0% | |
TAGGTTCGCCACCTCTGTTC+AGG | - | Chr6:101500355-101500374 | MsG0680035283.01.T01:CDS | 55.0% | |
TCCGATGCTTACGAGGACGA+TGG | - | Chr6:101500234-101500253 | MsG0680035283.01.T01:CDS | 55.0% | |
CGTGTCACGCGACGATGTGT+GGG | - | Chr6:101500671-101500690 | MsG0680035283.01.T01:CDS | 60.0% | |
GCGTGTCACGCGACGATGTG+TGG | - | Chr6:101500670-101500689 | MsG0680035283.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 101500060 | 101501316 | 101500060 | ID=MsG0680035283.01;Name=MsG0680035283.01 |
Chr6 | mRNA | 101500060 | 101501316 | 101500060 | ID=MsG0680035283.01.T01;Parent=MsG0680035283.01;Name=MsG0680035283.01.T01;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|418 |
Chr6 | exon | 101500060 | 101501316 | 101500060 | ID=MsG0680035283.01.T01:exon:10707;Parent=MsG0680035283.01.T01 |
Chr6 | CDS | 101500060 | 101501316 | 101500060 | ID=MsG0680035283.01.T01:cds;Parent=MsG0680035283.01.T01 |
Gene Sequence |
Protein sequence |