AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003242.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003242.01.T01 MTR_1g056490 86.687 969 65 6 83 996 40 999 0.0 1639
MsG0180003242.01.T01 MTR_8g106630 44.467 976 439 17 93 990 87 1037 0.0 772
MsG0180003242.01.T01 MTR_8g044260 44.810 973 462 15 85 990 50 1014 0.0 728
MsG0180003242.01.T01 MTR_1g109170 43.039 941 464 12 117 992 161 1094 0.0 725
MsG0180003242.01.T01 MTR_1g109170 43.039 941 464 12 117 992 161 1094 0.0 725
MsG0180003242.01.T01 MTR_4g134790 37.919 865 403 18 232 971 568 1423 1.22e-176 553
MsG0180003242.01.T01 MTR_8g045110 50.116 431 207 4 560 990 173 595 1.84e-139 432
MsG0180003242.01.T01 MTR_6g061840 34.714 700 375 14 258 934 243 883 1.62e-106 353
MsG0180003242.01.T01 MTR_4g134790 41.631 466 217 8 558 971 964 1426 3.32e-105 359
MsG0180003242.01.T01 MTR_4g134790 45.200 250 128 2 232 472 568 817 1.40e-59 223
MsG0180003242.01.T01 MTR_1g086640 32.549 765 436 17 226 967 14 721 7.57e-104 341
MsG0180003242.01.T01 MTR_3g023880 34.738 688 372 16 251 919 394 1023 2.73e-101 342
MsG0180003242.01.T01 MTR_1g023985 35.269 689 359 20 266 929 567 1193 1.56e-97 334
MsG0180003242.01.T01 MTR_3g054400 34.191 661 386 14 260 913 359 977 2.87e-97 331
MsG0180003242.01.T01 MTR_2g098440 34.342 661 385 14 260 913 562 1180 3.40e-96 331
MsG0180003242.01.T01 MTR_6g061840 36.106 565 294 10 257 799 242 761 5.24e-95 318
MsG0180003242.01.T01 MTR_1g114490 35.841 678 364 20 269 929 501 1124 6.25e-94 323
MsG0180003242.01.T01 MTR_5g075310 33.333 681 358 18 262 933 202 795 8.77e-92 310
MsG0180003242.01.T01 MTR_3g052610 31.683 707 387 16 256 913 41 700 5.38e-91 306
MsG0180003242.01.T01 MTR_8g080240 31.832 666 390 18 269 913 4 626 8.12e-89 298
MsG0180003242.01.T01 MTR_8g080240 31.832 666 390 18 269 913 4 626 1.93e-88 298
MsG0180003242.01.T01 MTR_2g015320 30.826 678 403 15 266 919 50 685 1.08e-86 294
MsG0180003242.01.T01 MTR_8g080240 32.310 619 358 16 269 869 4 579 1.35e-85 288
MsG0180003242.01.T01 MTR_5g090430 43.544 333 178 5 559 883 497 827 1.60e-78 278
MsG0180003242.01.T01 MTR_5g090430 45.161 248 119 4 238 474 43 284 3.39e-60 224
MsG0180003242.01.T01 MTR_5g090430 43.544 333 178 5 559 883 610 940 2.33e-78 279
MsG0180003242.01.T01 MTR_5g090430 45.161 248 119 4 238 474 156 397 5.67e-60 224
MsG0180003242.01.T01 MTR_6g061840 37.984 387 178 7 257 623 242 586 3.05e-61 220
MsG0180003242.01.T01 MTR_4g485610 34.709 412 237 11 560 967 300 683 6.41e-56 206
MsG0180003242.01.T01 MTR_4g485610 42.949 156 87 1 299 452 49 204 6.19e-30 127
MsG0180003242.01.T01 MTR_1g088590 30.847 496 288 13 262 722 23 498 4.86e-52 199
MsG0180003242.01.T01 MTR_8g041990 27.937 698 332 24 244 927 84 624 1.49e-51 193
MsG0180003242.01.T01 MTR_7g095080 31.806 371 225 7 560 918 359 713 1.29e-43 170
MsG0180003242.01.T01 MTR_7g095080 35.371 229 103 3 266 452 45 270 2.23e-32 135
MsG0180003242.01.T01 MTR_1543s0010 40.664 241 136 4 560 799 41 275 8.95e-41 152
MsG0180003242.01.T01 MTR_4g094992 30.053 376 229 8 561 918 148 507 2.04e-38 151
MsG0180003242.01.T01 MTR_3g014030 32.523 329 209 10 560 880 534 857 6.49e-34 142
MsG0180003242.01.T01 MTR_3g014030 35.897 195 120 2 259 452 256 446 1.69e-29 127
MsG0180003242.01.T01 MTR_3g055020 40.299 201 113 4 606 805 63 257 1.72e-33 135
MsG0180003242.01.T01 MTR_0267s0070 32.424 330 208 11 560 880 1189 1512 3.23e-33 140
MsG0180003242.01.T01 MTR_0267s0070 38.323 167 98 2 287 452 937 1099 2.05e-25 114
MsG0180003242.01.T01 MTR_3g086770 30.997 371 234 15 560 919 535 894 2.71e-30 130
MsG0180003242.01.T01 MTR_3g086770 37.755 196 116 3 259 452 256 447 7.56e-29 125
MsG0180003242.01.T01 MTR_4g023590 35.714 224 116 5 261 456 264 487 3.86e-30 129
MsG0180003242.01.T01 MTR_4g023590 40.000 165 94 3 560 722 718 879 2.72e-27 120
MsG0180003242.01.T01 MTR_4g120070 40.000 165 94 3 560 722 644 805 1.47e-27 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003242.01.T01 AT2G35920 67.079 969 247 9 83 993 71 1025 0.0 1278
MsG0180003242.01.T01 AT2G35920 67.079 969 247 9 83 993 39 993 0.0 1277
MsG0180003242.01.T01 AT2G35920 66.950 941 246 8 111 993 2 935 0.0 1237
MsG0180003242.01.T01 AT5G04895 45.541 942 443 13 112 990 91 1025 0.0 754
MsG0180003242.01.T01 AT2G01130 44.816 926 439 11 125 990 3 916 0.0 734
MsG0180003242.01.T01 AT1G48650 43.646 960 456 16 104 993 122 1066 0.0 734
MsG0180003242.01.T01 AT1G48650 43.646 960 456 16 104 993 122 1066 0.0 734
MsG0180003242.01.T01 AT2G01130 44.456 938 448 12 114 990 56 981 0.0 734
MsG0180003242.01.T01 AT1G58060 39.401 901 421 23 210 988 555 1452 0.0 565
MsG0180003242.01.T01 AT1G32490 33.908 696 366 17 245 913 371 999 7.36e-105 351
MsG0180003242.01.T01 AT1G32490 33.908 696 366 17 245 913 381 1009 9.62e-105 351
MsG0180003242.01.T01 AT2G47250 35.357 659 379 15 266 913 62 684 1.21e-104 343
MsG0180003242.01.T01 AT4G16680 36.722 659 355 18 266 913 132 739 1.77e-103 342
MsG0180003242.01.T01 AT3G62310 35.053 659 381 15 266 913 58 680 1.92e-102 337
MsG0180003242.01.T01 AT2G35340 34.504 655 376 18 266 913 263 871 4.52e-102 341
MsG0180003242.01.T01 AT2G35340 34.504 655 376 18 266 913 401 1009 2.52e-101 342
MsG0180003242.01.T01 AT5G13010 34.610 679 377 16 260 922 549 1176 1.12e-99 341
MsG0180003242.01.T01 AT4G18465 33.735 664 391 17 266 914 45 674 4.93e-97 322
MsG0180003242.01.T01 AT3G26560 34.833 689 362 19 266 929 512 1138 9.47e-96 328
MsG0180003242.01.T01 AT1G58050 41.525 472 232 11 560 988 940 1410 1.71e-93 325
MsG0180003242.01.T01 AT1G58050 40.940 298 160 5 187 472 514 807 6.67e-56 212
MsG0180003242.01.T01 AT1G27900 31.763 658 398 18 269 909 4 627 4.51e-86 292
MsG0180003242.01.T01 AT3G62310 38.115 488 267 10 266 741 58 522 8.42e-83 279
MsG0180003242.01.T01 AT3G62310 37.980 495 271 11 266 748 58 528 1.87e-82 278
MsG0180003242.01.T01 AT1G27900 32.686 566 336 13 269 821 4 537 2.33e-80 272
MsG0180003242.01.T01 AT1G27900 32.686 566 336 13 269 821 4 537 5.14e-80 271
MsG0180003242.01.T01 AT2G30800 42.188 384 209 8 559 931 265 646 6.50e-80 280
MsG0180003242.01.T01 AT2G30800 42.188 384 209 8 559 931 608 989 7.51e-79 281
MsG0180003242.01.T01 AT2G30800 52.174 207 95 2 258 461 176 381 2.15e-61 229
MsG0180003242.01.T01 AT1G26370 28.951 715 401 17 260 913 32 700 1.56e-73 258
MsG0180003242.01.T01 AT1G06670 36.000 475 280 10 458 921 542 1003 1.61e-73 266
MsG0180003242.01.T01 AT1G06670 50.698 215 96 3 256 461 198 411 7.53e-61 228
MsG0180003242.01.T01 AT1G06670 36.000 475 280 10 458 921 542 1003 2.16e-73 266
MsG0180003242.01.T01 AT1G06670 50.698 215 96 3 256 461 198 411 7.49e-61 228
MsG0180003242.01.T01 AT4G16680 37.255 459 216 11 266 702 212 620 4.09e-64 229
MsG0180003242.01.T01 AT2G47680 30.271 479 278 11 269 713 26 482 2.40e-45 177
MsG0180003242.01.T01 AT4G01020 30.513 390 243 11 560 936 571 945 2.43e-33 140
MsG0180003242.01.T01 AT4G01020 35.385 195 121 2 259 452 293 483 1.09e-26 119
MsG0180003242.01.T01 AT5G10370 31.496 381 233 13 560 927 574 939 6.57e-32 135
MsG0180003242.01.T01 AT5G10370 35.052 194 121 2 260 452 297 486 2.29e-27 120
MsG0180003242.01.T01 AT1G33390 28.986 414 221 13 560 913 673 1073 2.15e-30 130
MsG0180003242.01.T01 AT1G33390 34.211 228 115 5 261 456 233 457 1.18e-29 128
MsG0180003242.01.T01 AT1G33390 28.986 414 221 13 560 913 673 1073 2.15e-30 130
MsG0180003242.01.T01 AT1G33390 34.211 228 115 5 261 456 233 457 1.18e-29 128
MsG0180003242.01.T01 AT5G14900 30.827 266 169 8 649 913 2 253 7.82e-21 94.7

Find 257 sgRNAs with CRISPR-Local

Find 715 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGCATCTTCCCTATATT+TGG 0.125982 1:-58961387 None:intergenic
TGAAGGAAATGAAATCATTT+AGG 0.185922 1:+58954547 MsG0180003242.01.T01:CDS
ATTCAACTTCTTACCTAATA+GGG 0.213038 1:+58962985 MsG0180003242.01.T01:three_prime_UTR
CTCGATTTGTTATCTGATAT+TGG 0.223841 1:+58961777 MsG0180003242.01.T01:CDS
TATTCAACTTCTTACCTAAT+AGG 0.225573 1:+58962984 MsG0180003242.01.T01:three_prime_UTR
CGGCCTCCGCCTTGGTAGTT+AGG 0.227013 1:-58952673 None:intergenic
GATTATGCCCTACTTCTATT+TGG 0.242889 1:+58962319 MsG0180003242.01.T01:CDS
ATTGGTATGATATTTATCTT+AGG 0.271969 1:+58962872 MsG0180003242.01.T01:three_prime_UTR
GCCTTCTGCATCAACTGATA+TGG 0.278710 1:+58954280 MsG0180003242.01.T01:CDS
GAAGGAAATGAAATCATTTA+GGG 0.281299 1:+58954548 MsG0180003242.01.T01:CDS
TCGATTTGTTATCTGATATT+GGG 0.282250 1:+58961778 MsG0180003242.01.T01:CDS
AGCGATATTATTATGATATC+TGG 0.284822 1:+58962749 MsG0180003242.01.T01:three_prime_UTR
CCTCTGCTTGTTGTTGTCTA+AGG 0.285364 1:-58952834 None:intergenic
CATACTAGTTGCATGGAATT+AGG 0.291249 1:+58956414 MsG0180003242.01.T01:CDS
GTGCAGGTATTGGTAGTTTC+GGG 0.300999 1:+58954887 MsG0180003242.01.T01:intron
AAAGGTGTTCGGAGGATTTC+AGG 0.305659 1:-58961089 None:intergenic
CCAGCAAACCCTAGCTGATA+TGG 0.314154 1:+58953225 MsG0180003242.01.T01:CDS
GGTGCAGGTATTGGTAGTTT+CGG 0.322381 1:+58954886 MsG0180003242.01.T01:intron
GAGTGTCATTGAGTTGATTA+AGG 0.323582 1:+58962417 MsG0180003242.01.T01:CDS
CGCCGTGGCGGTGGCGGCGG+TGG 0.329120 1:+58952733 MsG0180003242.01.T01:CDS
AGGCGCTCAGCACGCCAAAC+AGG 0.333010 1:-58952814 None:intergenic
GTACCTTTGGACCCAAATAT+AGG 0.335848 1:+58961375 MsG0180003242.01.T01:CDS
CAACCAATACAGTCATGATT+TGG 0.338605 1:+58962075 MsG0180003242.01.T01:CDS
GGAGGCCGCCGTGGCGGTGG+CGG 0.339695 1:+58952727 MsG0180003242.01.T01:CDS
AGGAGGAAGAGGGATGATAT+TGG 0.339834 1:+58962836 MsG0180003242.01.T01:three_prime_UTR
GTGCAAAATGAACCCCTATT+AGG 0.340157 1:-58962998 None:intergenic
GGCGGAGGCCGCCGTGGCGG+TGG 0.341818 1:+58952724 MsG0180003242.01.T01:CDS
AGAAGTGGAGATTGGAAGGT+TGG 0.342216 1:-58952632 None:intergenic
GACTGGTGTTAGTCATTTGC+TGG 0.351448 1:+58955875 MsG0180003242.01.T01:CDS
GCATCTTTGTACTGTACCTT+TGG 0.353283 1:+58961362 MsG0180003242.01.T01:CDS
CTGTTTATAGGTAGGACAAA+TGG 0.363759 1:-58961477 None:intergenic
CTAATTCCATGCAACTAGTA+TGG 0.366137 1:-58956413 None:intergenic
CCATATCAGCTAGGGTTTGC+TGG 0.367699 1:-58953225 None:intergenic
GACATACACAACATCATCTA+TGG 0.369530 1:-58960753 None:intergenic
ATAGCATCGTGTATCAGTTT+TGG 0.371195 1:-58961050 None:intergenic
GGCCGCCGTGGCGGTGGCGG+CGG 0.376534 1:+58952730 MsG0180003242.01.T01:CDS
TGCCTCTGCGGCCTCCGCCT+TGG 0.385164 1:-58952681 None:intergenic
ACGGCGGCCTCCGCCGCGAT+TGG 0.385802 1:-58952716 None:intergenic
GTTTGTGCAATTCTTTGTGC+TGG 0.386507 1:+58962103 MsG0180003242.01.T01:CDS
GGGATGAATGTCAACCTTCC+CGG 0.386793 1:-58962191 None:intergenic
AAGTGATGAGAGTGAAAGTT+AGG 0.387342 1:-58952571 None:intergenic
GGCGGCGGTGGACGTGGTGG+CGG 0.390344 1:+58952745 MsG0180003242.01.T01:CDS
TACCTTTGGACCCAAATATA+GGG 0.393025 1:+58961376 MsG0180003242.01.T01:CDS
ATAGAACTTCTGAAGACAAT+TGG 0.393095 1:+58961215 MsG0180003242.01.T01:CDS
GTGAGGGCATTGAGATGCTT+GGG 0.395613 1:+58962368 MsG0180003242.01.T01:CDS
TTCAAAGGCTTCGGCACGTC+AGG 0.396392 1:+58960850 MsG0180003242.01.T01:CDS
ATTTCAGGTAACTGATACTC+TGG 0.398671 1:-58961074 None:intergenic
TCAAGGTCTGCACGGTAATC+AGG 0.399365 1:-58954049 None:intergenic
ATTAGAATGAGGCGTAAATC+TGG 0.399991 1:-58955972 None:intergenic
TTCTGAACAGCAAGAGAATC+TGG 0.401723 1:-58961188 None:intergenic
ATTATGAGAGAAGTGGAGAT+TGG 0.402425 1:-58952640 None:intergenic
CGCGGCGGAGGCCGCCGTGG+CGG 0.409275 1:+58952721 MsG0180003242.01.T01:CDS
GAAGCATCTTCCCTATATTT+GGG 0.409415 1:-58961386 None:intergenic
TAGAACTTCTGAAGACAATT+GGG 0.410749 1:+58961216 MsG0180003242.01.T01:CDS
GGAGGAAGAGGGATGATATT+GGG 0.413308 1:+58962837 MsG0180003242.01.T01:three_prime_UTR
GGACGTGGTGGCGGTGGCCG+AGG 0.413580 1:+58952754 MsG0180003242.01.T01:CDS
TCAATCAACCGCAAGGTCAC+TGG 0.415361 1:-58961735 None:intergenic
AGAGATGGTGGGACCCTGTT+TGG 0.416015 1:+58952800 MsG0180003242.01.T01:CDS
GGCCGAGGTGGCGGTGGCCG+AGG 0.416239 1:+58952769 MsG0180003242.01.T01:CDS
ATCATGGATTTCAAAGGCTT+CGG 0.421823 1:+58960841 MsG0180003242.01.T01:CDS
AGCTCGTATTTCTGCTGAAA+GGG 0.426146 1:+58955039 MsG0180003242.01.T01:CDS
AGATTCTAAGAAGGATCCTT+TGG 0.427339 1:+58956287 MsG0180003242.01.T01:CDS
GGCGGTGGCGGCGGTGGACG+TGG 0.428625 1:+58952739 MsG0180003242.01.T01:CDS
GCACATTAAAAGCTTGCAGC+TGG 0.434795 1:+58961127 MsG0180003242.01.T01:CDS
TGAGAGAAGTGGAGATTGGA+AGG 0.441915 1:-58952636 None:intergenic
GGCGGTGGCCGAGGTGGCGG+TGG 0.442181 1:+58952763 MsG0180003242.01.T01:CDS
GAAAGCAGTTCAAGGAAATC+AGG 0.442958 1:+58954608 MsG0180003242.01.T01:CDS
GAGTTTCTGAAAGCAGTTCA+AGG 0.444215 1:+58954600 MsG0180003242.01.T01:CDS
AATGAAAAGAGGAGGGGAAC+AGG 0.444780 1:+58953168 MsG0180003242.01.T01:CDS
ATACCGGTATGTGCATTGTT+GGG 0.446217 1:-58956043 None:intergenic
GGCGGTGGACGTGGTGGCGG+TGG 0.447000 1:+58952748 MsG0180003242.01.T01:CDS
TTGCCAGCTTGTTGCCATCA+TGG 0.448414 1:+58960825 MsG0180003242.01.T01:CDS
GGTGGCGGTGGCCGAGGTGG+CGG 0.449502 1:+58952760 MsG0180003242.01.T01:CDS
AAGAGGAGGGGAACAGGAGT+TGG 0.452589 1:+58953174 MsG0180003242.01.T01:CDS
ACGATATTGAGGGGAATTCA+AGG 0.453611 1:+58956247 MsG0180003242.01.T01:CDS
ACAGCTGCCACAGTTCATTC+TGG 0.454085 1:+58954934 MsG0180003242.01.T01:CDS
GTGAAAGTTAGGTCGGAGAA+AGG 0.459025 1:-58952560 None:intergenic
GGGATTTACTTTCCCTGTGG+TGG 0.460461 1:+58956167 MsG0180003242.01.T01:intron
TCCTTTGGCTGAAATGTTTG+AGG 0.463649 1:+58956302 MsG0180003242.01.T01:CDS
ATAAAAGAGCTCATAATTCA+AGG 0.464899 1:-58956385 None:intergenic
TGGTGTATTACTGCGGCAAC+TGG 0.468315 1:+58955147 MsG0180003242.01.T01:CDS
TGTTTATAGGTAGGACAAAT+GGG 0.468903 1:-58961476 None:intergenic
TTGGTAGTTTCGGGAGAGAC+AGG 0.469458 1:+58954896 MsG0180003242.01.T01:CDS
ACAACTCTTGCAAAGGTGTT+CGG 0.470003 1:-58961100 None:intergenic
CCTTCTGCATCAACTGATAT+GGG 0.471293 1:+58954281 MsG0180003242.01.T01:CDS
ACTCAAGGAAAGGCAGGAAC+TGG 0.472329 1:+58954382 MsG0180003242.01.T01:CDS
TCATCTTCCAATCGCGGCGG+AGG 0.472913 1:+58952709 MsG0180003242.01.T01:CDS
CACCTCGGCCACCGCCACCT+CGG 0.473918 1:-58952771 None:intergenic
GGTGGCGGCGGTGGACGTGG+TGG 0.477500 1:+58952742 MsG0180003242.01.T01:CDS
GTCCACCGCCGCCACCGCCA+CGG 0.477666 1:-58952735 None:intergenic
CAATCAACCGCAAGGTCACT+GGG 0.482509 1:-58961734 None:intergenic
TCTCCAAATCATGACTGTAT+TGG 0.486454 1:-58962078 None:intergenic
CGAGGTGGCGGTGGCCGAGG+TGG 0.487740 1:+58952772 MsG0180003242.01.T01:CDS
GGGTTTGTTGACAAGTCAAA+GGG 0.487956 1:+58961798 MsG0180003242.01.T01:CDS
AAGAGAAGCAGCAATAGTTA+AGG 0.489250 1:-58961442 None:intergenic
GCACAAAGAACCGTCAGCCT+TGG 0.489971 1:-58962680 None:intergenic
GGCCTCCGCCTTGGTAGTTA+GGG 0.492987 1:-58952672 None:intergenic
GTCGGAGTCTGACGATATTG+AGG 0.493116 1:+58956236 MsG0180003242.01.T01:CDS
TATGCCCTACTTCTATTTGG+TGG 0.493494 1:+58962322 MsG0180003242.01.T01:CDS
GAAACTCTTGGCAAAACTGT+TGG 0.494583 1:+58955064 MsG0180003242.01.T01:CDS
CGTGGTGGCGGTGGCCGAGG+TGG 0.494634 1:+58952757 MsG0180003242.01.T01:CDS
TTTCAGAGACGTGGTCGTGC+TGG 0.496119 1:+58960993 MsG0180003242.01.T01:intron
CTTTAGTGTAGAATGCTGTT+CGG 0.496776 1:-58962165 None:intergenic
AAGATAGAAACAATGAAAAG+AGG 0.497566 1:+58953157 MsG0180003242.01.T01:CDS
ATTGTTCAAAAGCTTCAAGA+AGG 0.497834 1:-58961653 None:intergenic
TAATGAGGAGCTTACTCCAC+TGG 0.499145 1:+58961250 MsG0180003242.01.T01:CDS
AATCAACTCAATGACACTCT+TGG 0.499280 1:-58962413 None:intergenic
CTTATTAAGAGCATCATAGC+TGG 0.500797 1:-58960801 None:intergenic
GAAACTCAGTGTTGCACTCA+AGG 0.501391 1:+58954367 MsG0180003242.01.T01:CDS
GATTACCACCAAATAGAAGT+AGG 0.502345 1:-58962327 None:intergenic
ATGTTGTGCAGTGCAAAAGA+AGG 0.502517 1:+58962137 MsG0180003242.01.T01:CDS
GAGAAGAAGTTTGTGTGCGT+GGG 0.503671 1:-58952608 None:intergenic
AAGATAAATATCATACCAAT+GGG 0.505008 1:-58962869 None:intergenic
TTATTATAACAGCTAATGAA+TGG 0.505148 1:-58962705 None:intergenic
TAGAAACAATGAAAAGAGGA+GGG 0.506277 1:+58953161 MsG0180003242.01.T01:CDS
GATGAGAGTGAAAGTTAGGT+CGG 0.509878 1:-58952567 None:intergenic
AATACCGGTATGTGCATTGT+TGG 0.510829 1:-58956044 None:intergenic
ATCATACCAATGGGTATATG+TGG 0.512197 1:-58962860 None:intergenic
TTCCCTATATTTGGGTCCAA+AGG 0.512431 1:-58961378 None:intergenic
TCTAGGAAATGCTCCACCAC+AGG 0.513122 1:-58956180 None:intergenic
TGGGTTTGTTGACAAGTCAA+AGG 0.515120 1:+58961797 MsG0180003242.01.T01:CDS
TCTTGGAAGCAGAGAAATGA+AGG 0.515881 1:-58962396 None:intergenic
TACTCTTCTCTCTATGTCTG+TGG 0.517287 1:-58954195 None:intergenic
GCTGAAAGGGGAGAAACTCT+TGG 0.517531 1:+58955052 MsG0180003242.01.T01:CDS
TAAGATAAATATCATACCAA+TGG 0.518093 1:-58962870 None:intergenic
GGTGAGGGCATTGAGATGCT+TGG 0.518531 1:+58962367 MsG0180003242.01.T01:CDS
TCTTCACCATACTAGTTGCA+TGG 0.518589 1:+58956407 MsG0180003242.01.T01:CDS
CATCCCTCTTCTGTTAATGC+CGG 0.518687 1:+58962208 MsG0180003242.01.T01:CDS
GGAAAGGCAGGAACTGGAGC+AGG 0.520300 1:+58954388 MsG0180003242.01.T01:CDS
GCAGGCAAGTGGTAGTTTGA+AGG 0.520512 1:+58954530 MsG0180003242.01.T01:intron
GCCGAGGTGGCGAACAGAGA+TGG 0.521292 1:+58952785 MsG0180003242.01.T01:CDS
TCAACAAGGGAAGGAGGAAG+AGG 0.523296 1:+58962825 MsG0180003242.01.T01:three_prime_UTR
CGTGCTGGTCGAGTACAACC+TGG 0.527642 1:+58961008 MsG0180003242.01.T01:CDS
TGACTAACACCAGTCAACTC+TGG 0.533118 1:-58955867 None:intergenic
TTCAACTTCTTACCTAATAG+GGG 0.535208 1:+58962986 MsG0180003242.01.T01:three_prime_UTR
GCATTCTACACTAAAGAAGC+CGG 0.536986 1:+58962172 MsG0180003242.01.T01:CDS
AATCTGGACGCCGAGGAAGA+AGG 0.537598 1:-58955956 None:intergenic
GAAGCAGCAATAGTTAAGGC+AGG 0.538108 1:-58961438 None:intergenic
TGAATATGCAGAAATTGCGT+GGG 0.538532 1:+58962531 MsG0180003242.01.T01:intron
ATAGAAACAATGAAAAGAGG+AGG 0.540602 1:+58953160 MsG0180003242.01.T01:CDS
CACATTAAAAGCTTGCAGCT+GGG 0.542165 1:+58961128 MsG0180003242.01.T01:CDS
CAGCTCGTATTTCTGCTGAA+AGG 0.542579 1:+58955038 MsG0180003242.01.T01:CDS
GCATTTCCTAGAAGATGTGT+TGG 0.542634 1:+58956191 MsG0180003242.01.T01:CDS
TGTTGCACTCAAGGAAAGGC+AGG 0.543396 1:+58954376 MsG0180003242.01.T01:CDS
TCGGAGTCTGACGATATTGA+GGG 0.544095 1:+58956237 MsG0180003242.01.T01:CDS
TATAGGGAAGATGCTTCTCA+TGG 0.544204 1:+58961392 MsG0180003242.01.T01:CDS
GTGGATGAAATTCATGAAAG+AGG 0.546325 1:+58955897 MsG0180003242.01.T01:CDS
TTGATAAGCCATATCAGCTA+GGG 0.547698 1:-58953233 None:intergenic
GTTGATAAGCCATATCAGCT+AGG 0.549325 1:-58953234 None:intergenic
AATCCATGATGGCAACAAGC+TGG 0.549719 1:-58960828 None:intergenic
TAGGGCATAATCTGAAATGT+TGG 0.550370 1:-58962308 None:intergenic
AGAGAAGAAGTTTGTGTGCG+TGG 0.551706 1:-58952609 None:intergenic
CACCGCCGCCACCGCCACGG+CGG 0.552402 1:-58952732 None:intergenic
TGTTGTGCAGTGCAAAAGAA+GGG 0.552764 1:+58962138 MsG0180003242.01.T01:CDS
TGCCCCAACAATGCACATAC+CGG 0.552776 1:+58956040 MsG0180003242.01.T01:CDS
GTTGCCATCATGGATTTCAA+AGG 0.553066 1:+58960835 MsG0180003242.01.T01:CDS
GAAACAACAAGATTCTAAGA+AGG 0.553154 1:+58956278 MsG0180003242.01.T01:CDS
CTATATACTAAGTAGGGCAG+AGG 0.559602 1:-58962244 None:intergenic
CTGAATATGCAGAAATTGCG+TGG 0.559786 1:+58962530 MsG0180003242.01.T01:intron
TCCTATCCCCAGTGACCTTG+CGG 0.560142 1:+58961727 MsG0180003242.01.T01:CDS
ATACAGTCATGATTTGGAGA+TGG 0.561340 1:+58962081 MsG0180003242.01.T01:CDS
TACCGGTATGTGCATTGTTG+GGG 0.563236 1:-58956042 None:intergenic
ACCATCTCTGTTCGCCACCT+CGG 0.564019 1:-58952786 None:intergenic
AATCGCGGCGGAGGCCGCCG+TGG 0.564504 1:+58952718 MsG0180003242.01.T01:CDS
AGAGTCTCTAATATAGATGC+TGG 0.570332 1:-58962284 None:intergenic
TTGATCCATGACGCTCATCA+AGG 0.570454 1:-58954066 None:intergenic
ACAGACATAGAGAGAAGAGT+AGG 0.571540 1:+58954197 MsG0180003242.01.T01:CDS
TACCAAGGCGGAGGCCGCAG+AGG 0.572276 1:+58952679 MsG0180003242.01.T01:CDS
TCACGAATATTGTATATACA+TGG 0.574950 1:-58956351 None:intergenic
ATTACCACCAAATAGAAGTA+GGG 0.575595 1:-58962326 None:intergenic
TTGTGGCACTCATTAGAATG+AGG 0.578398 1:-58955983 None:intergenic
GCCTCAAACATTTCAGCCAA+AGG 0.578432 1:-58956303 None:intergenic
TACAATCTATAACAAACTCC+AGG 0.579198 1:-58961026 None:intergenic
TGGTGTTAGTCATTTGCTGG+TGG 0.579339 1:+58955878 MsG0180003242.01.T01:CDS
TGAGGGCATTGAGATGCTTG+GGG 0.579849 1:+58962369 MsG0180003242.01.T01:CDS
GAAGAAATATCTTGTTTGCG+TGG 0.580072 1:+58954959 MsG0180003242.01.T01:CDS
GGCGCTCAGCACGCCAAACA+GGG 0.581050 1:-58952813 None:intergenic
TGCCGTAGCCGTTGATTGTG+AGG 0.584274 1:-58954246 None:intergenic
ACAGTCAACCTCACAATCAA+CGG 0.587488 1:+58954238 MsG0180003242.01.T01:CDS
ATTGGGCCACATATACCCAT+TGG 0.588070 1:+58962854 MsG0180003242.01.T01:three_prime_UTR
CGCCCTAACTACCAAGGCGG+AGG 0.588249 1:+58952670 MsG0180003242.01.T01:CDS
ACCGCAAGGTCACTGGGGAT+AGG 0.588892 1:-58961728 None:intergenic
TTCTGATGAAGGAAAAGCAG+TGG 0.589157 1:+58962604 MsG0180003242.01.T01:CDS
GAGGGCATTGAGATGCTTGG+GGG 0.590155 1:+58962370 MsG0180003242.01.T01:CDS
TCATCAGAAATGTCAAAACC+TGG 0.590365 1:-58962590 None:intergenic
CCCATATCAGTTGATGCAGA+AGG 0.592736 1:-58954281 None:intergenic
AGGTGCTTGATGAGAAAGAA+TGG 0.594078 1:+58953128 MsG0180003242.01.T01:CDS
ATTGAAAACGTGCAGGCAAG+TGG 0.596715 1:+58954519 MsG0180003242.01.T01:intron
CAACAAGGGAAGGAGGAAGA+GGG 0.596926 1:+58962826 MsG0180003242.01.T01:three_prime_UTR
GAACAAATCAGCATTGATTG+TGG 0.598112 1:-58956000 None:intergenic
TCCGCCGCGATTGGAAGATG+AGG 0.598904 1:-58952707 None:intergenic
GTAGGACATTATGAGAGAAG+TGG 0.598949 1:-58952647 None:intergenic
TCAGTGTTGCACTCAAGGAA+AGG 0.599662 1:+58954372 MsG0180003242.01.T01:CDS
GAGGTGGCGAACAGAGATGG+TGG 0.599949 1:+58952788 MsG0180003242.01.T01:CDS
GACGCTCATCAAGGTCTGCA+CGG 0.600299 1:-58954057 None:intergenic
AGAAGAAGTTTGTGTGCGTG+GGG 0.600770 1:-58952607 None:intergenic
CATAGACTGTGGCAAAGCAA+AGG 0.600974 1:+58960775 MsG0180003242.01.T01:CDS
AACCTCACAATCAACGGCTA+CGG 0.604178 1:+58954244 MsG0180003242.01.T01:CDS
AACTCCGGCATTAACAGAAG+AGG 0.605504 1:-58962212 None:intergenic
CTAGGAAATGCTCCACCACA+GGG 0.606295 1:-58956179 None:intergenic
ATATAGTACTCAACAAGGGA+AGG 0.606909 1:+58962816 MsG0180003242.01.T01:three_prime_UTR
GTACAAGATCCAGAGTTGAC+TGG 0.606996 1:+58955858 MsG0180003242.01.T01:CDS
TGCAGGCACAACTCTTGCAA+AGG 0.607698 1:-58961107 None:intergenic
GCAGACCTTGATGAGCGTCA+TGG 0.608281 1:+58954061 MsG0180003242.01.T01:CDS
AATGAGGAGCTTACTCCACT+GGG 0.608873 1:+58961251 MsG0180003242.01.T01:CDS
CATTCTACACTAAAGAAGCC+GGG 0.609004 1:+58962173 MsG0180003242.01.T01:CDS
TTGTTCAAAAGCTTCAAGAA+GGG 0.609918 1:-58961652 None:intergenic
TAGGTAGGACAAATGGGTTG+CGG 0.610142 1:-58961470 None:intergenic
ATAGGGAAGATGCTTCTCAT+GGG 0.611746 1:+58961393 MsG0180003242.01.T01:CDS
GAAGCCTTTGAAATCCATGA+TGG 0.613829 1:-58960839 None:intergenic
TGAACAAGCAGAGTTTATAG+TGG 0.616441 1:-58954321 None:intergenic
CTACACTAAAGAAGCCGGGA+AGG 0.619179 1:+58962177 MsG0180003242.01.T01:CDS
CAGAGGGAAGGAATGAACTC+CGG 0.619244 1:-58962227 None:intergenic
TCATGGATCAACACAGAAGG+AGG 0.621271 1:+58954078 MsG0180003242.01.T01:CDS
GTTTCGGGAGAGACAGGCTG+TGG 0.621306 1:+58954902 MsG0180003242.01.T01:CDS
ACTCCGGCATTAACAGAAGA+GGG 0.624285 1:-58962211 None:intergenic
AAGCTTGCAGCTGGGAACTG+TGG 0.626434 1:+58961136 MsG0180003242.01.T01:CDS
AGAACTTCTGAAGACAATTG+GGG 0.627744 1:+58961217 MsG0180003242.01.T01:CDS
TAGTACTCAACAAGGGAAGG+AGG 0.629034 1:+58962819 MsG0180003242.01.T01:three_prime_UTR
AACTAGATATAGCATCAAGT+CGG 0.629056 1:+58956218 MsG0180003242.01.T01:CDS
CATATCATCAATCAACCGCA+AGG 0.630366 1:-58961742 None:intergenic
GACCCAAGAAACAAAATCAG+TGG 0.631737 1:-58956453 None:intergenic
AGGTGGCGAACAGAGATGGT+GGG 0.635100 1:+58952789 MsG0180003242.01.T01:CDS
TGCTTGATGAGAAAGAATGG+TGG 0.635394 1:+58953131 MsG0180003242.01.T01:CDS
GACTTATATAGTACTCAACA+AGG 0.636522 1:+58962811 MsG0180003242.01.T01:three_prime_UTR
TATATACTAAGTAGGGCAGA+GGG 0.638148 1:-58962243 None:intergenic
AGAAACAATGAAAAGAGGAG+GGG 0.638268 1:+58953162 MsG0180003242.01.T01:CDS
TACTAAGTAGGGCAGAGGGA+AGG 0.638525 1:-58962239 None:intergenic
GCTCGTATTTCTGCTGAAAG+GGG 0.638601 1:+58955040 MsG0180003242.01.T01:CDS
TCTTGAAGCAAAACGTTCTG+CGG 0.639235 1:+58955099 MsG0180003242.01.T01:CDS
TCTGCACGGTAATCAGGCAA+AGG 0.640639 1:-58954043 None:intergenic
TGGGGCATTAGATAATAATG+AGG 0.640920 1:+58961235 MsG0180003242.01.T01:CDS
GCACCACTGGTGTATTACTG+CGG 0.642874 1:+58955140 MsG0180003242.01.T01:CDS
GCCTTGGTAGTTAGGGCGGT+AGG 0.646977 1:-58952665 None:intergenic
GTTGTGCAGTGCAAAAGAAG+GGG 0.648894 1:+58962139 MsG0180003242.01.T01:CDS
GCGTCATGGATCAACACAGA+AGG 0.651314 1:+58954075 MsG0180003242.01.T01:CDS
ACTCTTGCAAAGGTGTTCGG+AGG 0.651738 1:-58961097 None:intergenic
CCAGGGATTTACTTTCCCTG+TGG 0.656741 1:+58956164 MsG0180003242.01.T01:intron
CTCCGCCTTGGTAGTTAGGG+CGG 0.662954 1:-58952669 None:intergenic
CCTTAGACAACAACAAGCAG+AGG 0.667731 1:+58952834 MsG0180003242.01.T01:CDS
AACTCCTCATCTTCCAATCG+CGG 0.667895 1:+58952703 MsG0180003242.01.T01:CDS
AGGCGTAAATCTGGACGCCG+AGG 0.675249 1:-58955963 None:intergenic
TCTTCTTCCAGAATGAACTG+TGG 0.683100 1:-58954941 None:intergenic
CGGAGTCTGACGATATTGAG+GGG 0.683288 1:+58956238 MsG0180003242.01.T01:CDS
GAAGAAGTTTGTGTGCGTGG+GGG 0.690263 1:-58952606 None:intergenic
TCCTCATCTTCCAATCGCGG+CGG 0.692893 1:+58952706 MsG0180003242.01.T01:CDS
TTGCCGCAGTAATACACCAG+TGG 0.696313 1:-58955143 None:intergenic
TCCTACCGCCCTAACTACCA+AGG 0.700052 1:+58952664 MsG0180003242.01.T01:CDS
TGAACAGCAAGAGAATCTGG+CGG 0.704745 1:-58961185 None:intergenic
GAATATGCAGAAATTGCGTG+GGG 0.708075 1:+58962532 MsG0180003242.01.T01:intron
GGTAGACTATTTCAGAGACG+TGG 0.711975 1:+58960984 MsG0180003242.01.T01:intron
GAGATTGCAGACACACGACG+AGG 0.718053 1:-58955010 None:intergenic
ACTTATATAGTACTCAACAA+GGG 0.726700 1:+58962812 MsG0180003242.01.T01:three_prime_UTR
AAGATGAGGAGTTGCCTCTG+CGG 0.732806 1:-58952693 None:intergenic
GTTGTGTATGTCATAGACTG+TGG 0.750447 1:+58960764 MsG0180003242.01.T01:CDS
AATCAACCGCAAGGTCACTG+GGG 0.755428 1:-58961733 None:intergenic
TACCGCCCTAACTACCAAGG+CGG 0.778490 1:+58952667 MsG0180003242.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTTAAATTTGAAAG+AGG + Chr1:58955724-58955743 MsG0180003242.01.T01:intron 10.0%
!!! TTGCTTTATTTTATTTTATT+TGG + Chr1:58956132-58956151 MsG0180003242.01.T01:intron 10.0%
!! AATGGTTTCAATTAAATTTA+TGG - Chr1:58953296-58953315 None:intergenic 15.0%
!! ACTAATATAATTAGTCAATA+GGG - Chr1:58961939-58961958 None:intergenic 15.0%
!! CAACTTTCATTTAAATTAAT+GGG - Chr1:58955332-58955351 None:intergenic 15.0%
!! GTATTAATAAAAATTTAGAC+AGG + Chr1:58955223-58955242 MsG0180003242.01.T01:intron 15.0%
!!! AATTTGATGGTTAATAATTA+GGG + Chr1:58953081-58953100 MsG0180003242.01.T01:intron 15.0%
!!! ACTTTTCTTTTTTATATCTT+CGG + Chr1:58955824-58955843 MsG0180003242.01.T01:intron 15.0%
!!! ATGTACAATATCTATTTTTT+TGG + Chr1:58962779-58962798 MsG0180003242.01.T01:three_prime_UTR 15.0%
!!! ATTTTAAAATAATGCAATAC+CGG - Chr1:58956062-58956081 None:intergenic 15.0%
!!! GTCTAAATTTTTATTAATAC+AGG - Chr1:58955223-58955242 None:intergenic 15.0%
!!! TAAAAAATGTCTGAATTTTT+GGG + Chr1:58957829-58957848 MsG0180003242.01.T01:intron 15.0%
!!! TATGTTTTTCTATTACTAAT+GGG + Chr1:58960963-58960982 MsG0180003242.01.T01:intron 15.0%
!!! TGTACAATATCTATTTTTTT+GGG + Chr1:58962780-58962799 MsG0180003242.01.T01:three_prime_UTR 15.0%
!!! TTTAGAATAAACTACTAATT+TGG - Chr1:58953429-58953448 None:intergenic 15.0%
!! AAGATAAATATCATACCAAT+GGG - Chr1:58962872-58962891 None:intergenic 20.0%
!! AATGGAAAATTAGAAATAGT+TGG - Chr1:58958122-58958141 None:intergenic 20.0%
!! ACTACTAGTGTTAATATAAT+TGG - Chr1:58953702-58953721 None:intergenic 20.0%
!! AGAAACAGACAATTAAAAAA+TGG - Chr1:58953314-58953333 None:intergenic 20.0%
!! AGAAGACTTTAATATTTGAT+AGG + Chr1:58953389-58953408 MsG0180003242.01.T01:intron 20.0%
!! ATGGAAAATTAGAAATAGTT+GGG - Chr1:58958121-58958140 None:intergenic 20.0%
!! ATTGACTAATTATATTAGTC+TGG + Chr1:58961940-58961959 MsG0180003242.01.T01:intron 20.0%
!! ATTGGTATGATATTTATCTT+AGG + Chr1:58962872-58962891 MsG0180003242.01.T01:three_prime_UTR 20.0%
!! ATTGTTGTATTCTATATTTG+AGG + Chr1:58959005-58959024 MsG0180003242.01.T01:intron 20.0%
!! ATTTATATATACAGCAATGA+TGG - Chr1:58957290-58957309 None:intergenic 20.0%
!! CTAATATAATTAGTCAATAG+GGG - Chr1:58961938-58961957 None:intergenic 20.0%
!! CTTGAAAAAAATTACTTACT+TGG + Chr1:58959802-58959821 MsG0180003242.01.T01:intron 20.0%
!! GACTAATATAATTAGTCAAT+AGG - Chr1:58961940-58961959 None:intergenic 20.0%
!! GACTCATTAAATAAAATTGT+TGG + Chr1:58958793-58958812 MsG0180003242.01.T01:intron 20.0%
!! GCAACTTTCATTTAAATTAA+TGG - Chr1:58955333-58955352 None:intergenic 20.0%
!! TAAAATTGTTGGATAAAAGT+AGG + Chr1:58958804-58958823 MsG0180003242.01.T01:intron 20.0%
!! TAAGATAAATATCATACCAA+TGG - Chr1:58962873-58962892 None:intergenic 20.0%
!! TATTACAAATTGCAAAAACA+AGG - Chr1:58957213-58957232 None:intergenic 20.0%
!! TGAATATATATGTCTTTCAT+GGG + Chr1:58959335-58959354 MsG0180003242.01.T01:intron 20.0%
!! TTATTATAACAGCTAATGAA+TGG - Chr1:58962708-58962727 None:intergenic 20.0%
!! TTGAATATATATGTCTTTCA+TGG + Chr1:58959334-58959353 MsG0180003242.01.T01:intron 20.0%
!!! AAATTAATTAAGGGTATCTT+TGG - Chr1:58957903-58957922 None:intergenic 20.0%
!!! AGGATAAGATCTTTTTTTTT+TGG - Chr1:58958939-58958958 None:intergenic 20.0%
!!! ATAAGATCTTTTTTTTTTGG+TGG - Chr1:58958936-58958955 None:intergenic 20.0%
!!! ATCTCTATTTTATGAATTAG+AGG + Chr1:58957483-58957502 MsG0180003242.01.T01:intron 20.0%
!!! ATTTACTTGACTATATTTTC+TGG + Chr1:58960124-58960143 MsG0180003242.01.T01:intron 20.0%
!!! CTATGTTTTTCTATTACTAA+TGG + Chr1:58960962-58960981 MsG0180003242.01.T01:intron 20.0%
!!! GAATTTGATGGTTAATAATT+AGG + Chr1:58953080-58953099 MsG0180003242.01.T01:intron 20.0%
!!! GTAAAAAATGTCTGAATTTT+TGG + Chr1:58957828-58957847 MsG0180003242.01.T01:intron 20.0%
!!! TAATATGCTGTATATTTTTC+TGG + Chr1:58953923-58953942 MsG0180003242.01.T01:intron 20.0%
!!! TCTATTTTTTTGGGTTAAAA+AGG + Chr1:58962789-58962808 MsG0180003242.01.T01:three_prime_UTR 20.0%
!!! TTCATTTAAATTAATGGGTA+TGG - Chr1:58955327-58955346 None:intergenic 20.0%
!!! TTGACTAATTATATTAGTCT+GGG + Chr1:58961941-58961960 MsG0180003242.01.T01:intron 20.0%
!!! TTTTCACTATATACTAAGTA+GGG - Chr1:58962253-58962272 None:intergenic 20.0%
!!! TTTTTCACTATATACTAAGT+AGG - Chr1:58962254-58962273 None:intergenic 20.0%
! AAAAATGGTTCTTTAGTTGT+TGG + Chr1:58956986-58957005 MsG0180003242.01.T01:intron 25.0%
! AAAACTAGCACTTAATGATA+AGG + Chr1:58960363-58960382 MsG0180003242.01.T01:intron 25.0%
! AAAATTAAGTTCATACAGTG+AGG + Chr1:58955654-58955673 MsG0180003242.01.T01:intron 25.0%
! AAAGCCATGCATATAATAAA+GGG + Chr1:58953996-58954015 MsG0180003242.01.T01:intron 25.0%
! AAATGTAATTACATGTGTCT+GGG + Chr1:58952965-58952984 MsG0180003242.01.T01:intron 25.0%
! AAATTTGTGTATGAGCAATA+TGG + Chr1:58956750-58956769 MsG0180003242.01.T01:intron 25.0%
! AACTTAGAAAATTTCGTCAA+AGG - Chr1:58959249-58959268 None:intergenic 25.0%
! AAGATAGAAACAATGAAAAG+AGG + Chr1:58953157-58953176 MsG0180003242.01.T01:CDS 25.0%
! ACAATAACATAATACTCTAG+TGG - Chr1:58958990-58959009 None:intergenic 25.0%
! ACTTAATAGATTCAGATAGT+TGG + Chr1:58955456-58955475 MsG0180003242.01.T01:intron 25.0%
! ACTTATATAGTACTCAACAA+GGG + Chr1:58962812-58962831 MsG0180003242.01.T01:three_prime_UTR 25.0%
! ACTTCAAGAATCATGAAAAA+TGG + Chr1:58956971-58956990 MsG0180003242.01.T01:intron 25.0%
! AGAGAAATATGTTTCAGTTT+AGG - Chr1:58960245-58960264 None:intergenic 25.0%
! AGCAGAAACTTAAGAAATAA+AGG - Chr1:58957245-58957264 None:intergenic 25.0%
! AGCGATATTATTATGATATC+TGG + Chr1:58962749-58962768 MsG0180003242.01.T01:three_prime_UTR 25.0%
! ATAAAAGAGCTCATAATTCA+AGG - Chr1:58956388-58956407 None:intergenic 25.0%
! ATAAAATTCATACAGTGAGT+AGG + Chr1:58955546-58955565 MsG0180003242.01.T01:intron 25.0%
! ATAAATAAAGCTCCTATGAA+TGG - Chr1:58963049-58963068 None:intergenic 25.0%
! ATGTATATATGCAAGAATCA+TGG + Chr1:58960037-58960056 MsG0180003242.01.T01:intron 25.0%
! ATTCAACTTCTTACCTAATA+GGG + Chr1:58962985-58963004 MsG0180003242.01.T01:three_prime_UTR 25.0%
! ATTTGCAAAATAAGGAAATG+GGG - Chr1:58957454-58957473 None:intergenic 25.0%
! CATTTGCAAAATAAGGAAAT+GGG - Chr1:58957455-58957474 None:intergenic 25.0%
! CTCCATGAAAATTTAAAAGA+GGG + Chr1:58954717-58954736 MsG0180003242.01.T01:intron 25.0%
! GAAGGAAATGAAATCATTTA+GGG + Chr1:58954548-58954567 MsG0180003242.01.T01:CDS 25.0%
! GAATATATATGTCGAAATGA+AGG + Chr1:58959718-58959737 MsG0180003242.01.T01:intron 25.0%
! GAGCTATTTATTATCATTCA+TGG + Chr1:58954637-58954656 MsG0180003242.01.T01:intron 25.0%
! GGAATTGAAATCTTAAAAAC+AGG - Chr1:58955202-58955221 None:intergenic 25.0%
! GTGAGATGAACTTTATAATT+AGG + Chr1:58957933-58957952 MsG0180003242.01.T01:intron 25.0%
! TAAATGTAATTACATGTGTC+TGG + Chr1:58952964-58952983 MsG0180003242.01.T01:intron 25.0%
! TATCCTTTCCAAAATTTCAT+GGG + Chr1:58958953-58958972 MsG0180003242.01.T01:intron 25.0%
! TATCTGAATCTATTAAGTGA+AGG - Chr1:58955454-58955473 None:intergenic 25.0%
! TATTAAGTTTAGATGTTCAC+AGG - Chr1:58953908-58953927 None:intergenic 25.0%
! TATTCAACTTCTTACCTAAT+AGG + Chr1:58962984-58963003 MsG0180003242.01.T01:three_prime_UTR 25.0%
! TCACGAATATTGTATATACA+TGG - Chr1:58956354-58956373 None:intergenic 25.0%
! TCATAAAATAGAGATTCATC+TGG - Chr1:58957478-58957497 None:intergenic 25.0%
! TCTCCATGAAAATTTAAAAG+AGG + Chr1:58954716-58954735 MsG0180003242.01.T01:intron 25.0%
! TGAAGGAAATGAAATCATTT+AGG + Chr1:58954547-58954566 MsG0180003242.01.T01:CDS 25.0%
! TGAGATTGAATAATCAGTAA+TGG + Chr1:58958187-58958206 MsG0180003242.01.T01:intron 25.0%
! TTATCCTTTCCAAAATTTCA+TGG + Chr1:58958952-58958971 MsG0180003242.01.T01:intron 25.0%
! TTGTACTTTGATGAATTTGA+TGG + Chr1:58953068-58953087 MsG0180003242.01.T01:intron 25.0%
! TTGTTACAATGCTATTGTTA+CGG - Chr1:58956496-58956515 None:intergenic 25.0%
! TTTATTCGAAATTGAGAACA+AGG + Chr1:58962009-58962028 MsG0180003242.01.T01:intron 25.0%
! TTTGATTACTATGATGTTTC+AGG + Chr1:58959299-58959318 MsG0180003242.01.T01:intron 25.0%
!! ACGTTCATTTTCTTTTAGAT+TGG - Chr1:58960298-58960317 None:intergenic 25.0%
!! AGAAACATGTTGTATCTTTT+TGG - Chr1:58958670-58958689 None:intergenic 25.0%
!! AGCAAATTTTCATCATGTTT+TGG - Chr1:58957164-58957183 None:intergenic 25.0%
!! ATCTACGTCATAAGTTATTT+TGG + Chr1:58953621-58953640 MsG0180003242.01.T01:intron 25.0%
!! ATTTAAAACATGAGTGCATT+GGG + Chr1:58957651-58957670 MsG0180003242.01.T01:intron 25.0%
!! CATAACTTTTTAACAGCATA+AGG + Chr1:58960889-58960908 MsG0180003242.01.T01:intron 25.0%
!! CATTTTCTTCTTTTCACAAT+AGG - Chr1:58960200-58960219 None:intergenic 25.0%
!! GATGTTAAATTGATTCTGTT+GGG + Chr1:58953505-58953524 MsG0180003242.01.T01:intron 25.0%
!! GGATGAAAAGAATTTTTGTT+GGG + Chr1:58961698-58961717 MsG0180003242.01.T01:CDS 25.0%
!! GTGAATTGTTAATTACCTTT+TGG - Chr1:58956651-58956670 None:intergenic 25.0%
!! TAAAGATTTTACTAGAAGAG+AGG - Chr1:58957129-58957148 None:intergenic 25.0%
!! TATATCTTCGGTTTTTGAAT+AGG + Chr1:58955836-58955855 MsG0180003242.01.T01:intron 25.0%
!! TATTTAAAACATGAGTGCAT+TGG + Chr1:58957650-58957669 MsG0180003242.01.T01:intron 25.0%
!! TTAATTTTGTGAGTTACAGA+AGG + Chr1:58953105-58953124 MsG0180003242.01.T01:intron 25.0%
!! TTCAACAAGAAATTGGTAAT+CGG - Chr1:58954131-58954150 None:intergenic 25.0%
!! TTTGTTGCTTCATATTTAAG+TGG + Chr1:58954745-58954764 MsG0180003242.01.T01:intron 25.0%
!!! AAAAGCATTAGAGATTTTGT+TGG - Chr1:58962459-58962478 None:intergenic 25.0%
!!! ATTTTATGAATTAGAGGTAC+CGG + Chr1:58957489-58957508 MsG0180003242.01.T01:intron 25.0%
!!! CATCATGTTTTGGTTTTTAA+AGG - Chr1:58957154-58957173 None:intergenic 25.0%
!!! CTTTGGAATAACATTAAATG+CGG - Chr1:58957886-58957905 None:intergenic 25.0%
!!! CTTTTTTTCTGTTTATAGGT+AGG - Chr1:58961488-58961507 None:intergenic 25.0%
!!! CTTTTTTTTACATGAAACCA+AGG + Chr1:58957978-58957997 MsG0180003242.01.T01:intron 25.0%
!!! GCTTCTTTTTTTCTGTTTAT+AGG - Chr1:58961492-58961511 None:intergenic 25.0%
!!! TCGATTTGTTATCTGATATT+GGG + Chr1:58961778-58961797 MsG0180003242.01.T01:CDS 25.0%
!!! TGCAATGATTTTTTTTTCCA+AGG + Chr1:58962663-58962682 MsG0180003242.01.T01:exon 25.0%
!!! TTGGTTTCATTGTTTTACAT+AGG + Chr1:58958413-58958432 MsG0180003242.01.T01:intron 25.0%
!!! TTTTAAAGAAAATGGGACAA+GGG - Chr1:58961836-58961855 None:intergenic 25.0%
!!! TTTTGTTGTGATAATATGCT+TGG + Chr1:58959954-58959973 MsG0180003242.01.T01:intron 25.0%
!!! TTTTTAAAGAAAATGGGACA+AGG - Chr1:58961837-58961856 None:intergenic 25.0%
AAAAGAAAAGTGAACACCAT+TGG - Chr1:58955815-58955834 None:intergenic 30.0%
AAAATCAAACACTTCTAGAC+TGG - Chr1:58957547-58957566 None:intergenic 30.0%
AAACCTATAACTTCAACAGT+AGG - Chr1:58957751-58957732 None:intergenic 30.0%
AAATATTTCACATTGGTCGA+TGG - Chr1:58959874-58959893 None:intergenic 30.0%
AACAAAAGTCAAGTATGGTT+TGG - Chr1:58953591-58953610 None:intergenic 30.0%
AACTAGATATAGCATCAAGT+CGG + Chr1:58956218-58956237 MsG0180003242.01.T01:CDS 30.0%
AAGGCTCTTATACATTTGAT+GGG + Chr1:58960506-58960525 MsG0180003242.01.T01:intron 30.0%
AAGTAATCTTAATCAGCAAG+AGG + Chr1:58960422-58960441 MsG0180003242.01.T01:intron 30.0%
ACAAACCTGTTCAATAAAGT+GGG + Chr1:58958530-58958549 MsG0180003242.01.T01:intron 30.0%
ACCAATTTCTTGAAAACCAA+AGG - Chr1:58958398-58958417 None:intergenic 30.0%
AGAATACAGTAAAATCTGAC+TGG + Chr1:58954859-58954878 MsG0180003242.01.T01:intron 30.0%
AGAGTTTAAGCCAAGAATAT+TGG - Chr1:58960538-58960557 None:intergenic 30.0%
AGATGTTATCTGAGCTAATT+TGG + Chr1:58961326-58961345 MsG0180003242.01.T01:intron 30.0%
AGCATAACCTTATTCTGTTA+TGG - Chr1:58957789-58957808 None:intergenic 30.0%
AGTTCAACAAAAGTCAAGTA+TGG - Chr1:58953596-58953615 None:intergenic 30.0%
ATAGAAACAATGAAAAGAGG+AGG + Chr1:58953160-58953179 MsG0180003242.01.T01:CDS 30.0%
ATATTCTTGGCTTAAACTCT+TGG + Chr1:58960538-58960557 MsG0180003242.01.T01:intron 30.0%
ATTACATTTACTGTCCAGTT+GGG + Chr1:58953541-58953560 MsG0180003242.01.T01:intron 30.0%
ATTACCACCAAATAGAAGTA+GGG - Chr1:58962329-58962348 None:intergenic 30.0%
ATTGTTCAAAAGCTTCAAGA+AGG - Chr1:58961656-58961675 None:intergenic 30.0%
CAAAGGAAGAATAGTGATTT+GGG - Chr1:58958381-58958400 None:intergenic 30.0%
CAAGAGTAAGACACTAAATA+GGG - Chr1:58961892-58961911 None:intergenic 30.0%
CTTAACACCTACTTTCTTAT+TGG + Chr1:58956811-58956830 MsG0180003242.01.T01:intron 30.0%
GAAAGCCATGCATATAATAA+AGG + Chr1:58953995-58954014 MsG0180003242.01.T01:intron 30.0%
GAAATATGTTTCAGTTTAGG+AGG - Chr1:58960242-58960261 None:intergenic 30.0%
GAATAAACTTCAGTTGTCTT+CGG - Chr1:58961996-58962015 None:intergenic 30.0%
GAATAACATTAAATGCGGTT+CGG - Chr1:58957881-58957900 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + Chr1:58958889-58958908 MsG0180003242.01.T01:intron 30.0%
GACTTATATAGTACTCAACA+AGG + Chr1:58962811-58962830 MsG0180003242.01.T01:three_prime_UTR 30.0%
GAGTTTAAGCCAAGAATATT+GGG - Chr1:58960537-58960556 None:intergenic 30.0%
GATAAACAATTATGCCTTGT+AGG + Chr1:58953366-58953385 MsG0180003242.01.T01:intron 30.0%
GCAAACTTTCAACAAGAAAT+TGG - Chr1:58954138-58954157 None:intergenic 30.0%
GCAATTCTTGTATTTCTTAC+TGG + Chr1:58959748-58959767 MsG0180003242.01.T01:intron 30.0%
GCATTTGCAAAATAAGGAAA+TGG - Chr1:58957456-58957475 None:intergenic 30.0%
GGTTTAGAAACAAGTTACAA+GGG - Chr1:58962482-58962501 None:intergenic 30.0%
GTCAAGTAAATACGATTAAC+TGG - Chr1:58960115-58960134 None:intergenic 30.0%
GTCAGAGTTAAACAGAAAAT+GGG - Chr1:58961974-58961993 None:intergenic 30.0%
GTTGTATTCTATATTTGAGG+TGG + Chr1:58959008-58959027 MsG0180003242.01.T01:intron 30.0%
TAAGCTCTATAATCAGTTCA+TGG - Chr1:58957689-58957708 None:intergenic 30.0%
TACAATCTATAACAAACTCC+AGG - Chr1:58961029-58961048 None:intergenic 30.0%
TAGAAACAATGAAAAGAGGA+GGG + Chr1:58953161-58953180 MsG0180003242.01.T01:CDS 30.0%
TATATATGCAAGAATCATGG+AGG + Chr1:58960040-58960059 MsG0180003242.01.T01:intron 30.0%
TATATATGTCGAAATGAAGG+TGG + Chr1:58959721-58959740 MsG0180003242.01.T01:intron 30.0%
TATTAAAGTCTTCTCCTACA+AGG - Chr1:58953383-58953402 None:intergenic 30.0%
TCAAGAGTAAGACACTAAAT+AGG - Chr1:58961893-58961912 None:intergenic 30.0%
TCATTACAAAAGTTACAGCT+CGG + Chr1:58957364-58957383 MsG0180003242.01.T01:intron 30.0%
TCTTCCCTTTATTATATGCA+TGG - Chr1:58954003-58954022 None:intergenic 30.0%
TGGTTTAGAAACAAGTTACA+AGG - Chr1:58962483-58962502 None:intergenic 30.0%
TGTTTATAGGTAGGACAAAT+GGG - Chr1:58961479-58961498 None:intergenic 30.0%
TTAGAAAATCTCTTGAAGCT+TGG + Chr1:58957390-58957409 MsG0180003242.01.T01:intron 30.0%
TTAGTGACCATAACAGAATA+AGG + Chr1:58957779-58957798 MsG0180003242.01.T01:intron 30.0%
TTCAACTTCTTACCTAATAG+GGG + Chr1:58962986-58963005 MsG0180003242.01.T01:three_prime_UTR 30.0%
TTCTTAATCCTTCCAATACA+TGG + Chr1:58959837-58959856 MsG0180003242.01.T01:intron 30.0%
TTGAGATCCAAAATGTTTGA+AGG - Chr1:58960071-58960090 None:intergenic 30.0%
TTGTTCAAAAGCTTCAAGAA+GGG - Chr1:58961655-58961674 None:intergenic 30.0%
TTGTTGGATAAAAGTAGGAA+AGG + Chr1:58958809-58958828 MsG0180003242.01.T01:intron 30.0%
TTGTTTAGTAAAACCCATGT+GGG - Chr1:58956893-58956912 None:intergenic 30.0%
TTTGCAAAATAAGGAAATGG+GGG - Chr1:58957453-58957472 None:intergenic 30.0%
! AAACAGGATGTTCAGTTTTA+AGG - Chr1:58955186-58955205 None:intergenic 30.0%
! AAACATGCTTGCCTTTTATT+AGG - Chr1:58959909-58959928 None:intergenic 30.0%
! AAACATTTTGGATCTCAAAG+GGG + Chr1:58960073-58960092 MsG0180003242.01.T01:intron 30.0%
! AACATGCTTGCCTTTTATTA+GGG - Chr1:58959908-58959927 None:intergenic 30.0%
! AACTACTGTAGTTAGTTTAG+AGG - Chr1:58959066-58959085 None:intergenic 30.0%
! AATATTGCAGCCTTATATGT+GGG + Chr1:58955765-58955784 MsG0180003242.01.T01:intron 30.0%
! AGGTATTTGAAGCAATTAGT+AGG + Chr1:58954408-58954427 MsG0180003242.01.T01:intron 30.0%
! ATAGAACTTCTGAAGACAAT+TGG + Chr1:58961215-58961234 MsG0180003242.01.T01:CDS 30.0%
! ATTCGATACCCATGAAATTT+TGG - Chr1:58958964-58958983 None:intergenic 30.0%
! CAAACATTTTGGATCTCAAA+GGG + Chr1:58960072-58960091 MsG0180003242.01.T01:intron 30.0%
! CGATGTTAAATTGATTCTGT+TGG + Chr1:58953504-58953523 MsG0180003242.01.T01:intron 30.0%
! GAAACAACAAGATTCTAAGA+AGG + Chr1:58956278-58956297 MsG0180003242.01.T01:CDS 30.0%
! GAAAGTTGCTTTACAATGTA+AGG + Chr1:58955344-58955363 MsG0180003242.01.T01:intron 30.0%
! GGGATGAAAAGAATTTTTGT+TGG + Chr1:58961697-58961716 MsG0180003242.01.T01:CDS 30.0%
! TAATATTGCAGCCTTATATG+TGG + Chr1:58955764-58955783 MsG0180003242.01.T01:intron 30.0%
! TAGAACTTCTGAAGACAATT+GGG + Chr1:58961216-58961235 MsG0180003242.01.T01:CDS 30.0%
! TCAAACATTTTGGATCTCAA+AGG + Chr1:58960071-58960090 MsG0180003242.01.T01:intron 30.0%
! TCAGACTTCATTTTAAATGC+AGG - Chr1:58954582-58954601 None:intergenic 30.0%
! TCTGAGGTCTATATTACTAA+TGG - Chr1:58953849-58953868 None:intergenic 30.0%
! TGATAATAGACAAGCGATTT+TGG + Chr1:58956717-58956736 MsG0180003242.01.T01:intron 30.0%
! TGCAGGTTAGTTATTGATAT+GGG + Chr1:58961546-58961565 MsG0180003242.01.T01:intron 30.0%
! TGCCCTCTTTTAAATTTTCA+TGG - Chr1:58954722-58954741 None:intergenic 30.0%
! TTACGTGCATTTAATTTCCT+TGG - Chr1:58957998-58958017 None:intergenic 30.0%
! TTCTTGAAGCTTTTGAACAA+TGG + Chr1:58961655-58961674 MsG0180003242.01.T01:CDS 30.0%
! TTGCAGGTTAGTTATTGATA+TGG + Chr1:58961545-58961564 MsG0180003242.01.T01:intron 30.0%
!! AACAGGATGTTCAGTTTTAA+GGG - Chr1:58955185-58955204 None:intergenic 30.0%
!! ATACCCATGAAATTTTGGAA+AGG - Chr1:58958959-58958978 None:intergenic 30.0%
!! CCTTTTGGTGACAATAAAAA+AGG - Chr1:58956636-58956655 None:intergenic 30.0%
!! CTCGATTTGTTATCTGATAT+TGG + Chr1:58961777-58961796 MsG0180003242.01.T01:CDS 30.0%
!!! AAGTTATTTTGGATTGAACC+TGG + Chr1:58953632-58953651 MsG0180003242.01.T01:intron 30.0%
!!! AGATCTTTTTTTTTTGGTGG+TGG - Chr1:58958933-58958952 None:intergenic 30.0%
!!! ATCTATGGTTTTGTTGAAAC+TGG + Chr1:58958471-58958490 MsG0180003242.01.T01:intron 30.0%
!!! ATTCCACTGATTTTGTTTCT+TGG + Chr1:58956450-58956469 MsG0180003242.01.T01:CDS 30.0%
!!! ATTTTTTTTTCCAAGGCTGA+CGG + Chr1:58962670-58962689 MsG0180003242.01.T01:exon 30.0%
!!! CCTTTTTTATTGTCACCAAA+AGG + Chr1:58956633-58956652 MsG0180003242.01.T01:intron 30.0%
!!! CTGTTTTAACAATGTACTTG+AGG - Chr1:58953749-58953768 None:intergenic 30.0%
!!! GGTTTTGATTTTGCTGAAAT+TGG + Chr1:58958434-58958453 MsG0180003242.01.T01:intron 30.0%
!!! TCCTTTGGTTTTCAAGAAAT+TGG + Chr1:58958394-58958413 MsG0180003242.01.T01:intron 30.0%
!!! TTCCACTGATTTTGTTTCTT+GGG + Chr1:58956451-58956470 MsG0180003242.01.T01:CDS 30.0%
AACAGAAAAATTGAAGAGCC+AGG + Chr1:58962572-58962591 MsG0180003242.01.T01:CDS 35.0%
AACTGTGCATTCTATGTTCT+CGG + Chr1:58959169-58959188 MsG0180003242.01.T01:intron 35.0%
AAGAGAAGCAGCAATAGTTA+AGG - Chr1:58961445-58961464 None:intergenic 35.0%
AAGCTGTTAGAATGCTTATC+TGG - Chr1:58959124-58959143 None:intergenic 35.0%
AAGTGATGAGAGTGAAAGTT+AGG - Chr1:58952574-58952593 None:intergenic 35.0%
AATCAACTCAATGACACTCT+TGG - Chr1:58962416-58962435 None:intergenic 35.0%
AATCTTGACCCTAGCAAAAA+TGG + Chr1:58962346-58962365 MsG0180003242.01.T01:CDS 35.0%
ACTAAATAGGGAGAGAAGAT+GGG - Chr1:58961880-58961899 None:intergenic 35.0%
AGAAACAATGAAAAGAGGAG+GGG + Chr1:58953162-58953181 MsG0180003242.01.T01:CDS 35.0%
AGAATAAGGTTATGCTACTC+TGG + Chr1:58957793-58957812 MsG0180003242.01.T01:intron 35.0%
AGAGTCAGTTACAACTTACA+AGG - Chr1:58953797-58953816 None:intergenic 35.0%
AGAGTCTCTAATATAGATGC+TGG - Chr1:58962287-58962306 None:intergenic 35.0%
AGCAACACAAATAAGGAAGA+TGG - Chr1:58959221-58959240 None:intergenic 35.0%
ATAATTAGCAAGCACAAGCA+TGG - Chr1:58961602-58961621 None:intergenic 35.0%
ATATACAGCAATGATGGCAA+GGG - Chr1:58957284-58957303 None:intergenic 35.0%
ATATAGTACTCAACAAGGGA+AGG + Chr1:58962816-58962835 MsG0180003242.01.T01:three_prime_UTR 35.0%
ATATGAGCATCCCACATATA+AGG - Chr1:58955778-58955797 None:intergenic 35.0%
ATCATACCAATGGGTATATG+TGG - Chr1:58962863-58962882 None:intergenic 35.0%
ATCATGGATTTCAAAGGCTT+CGG + Chr1:58960841-58960860 MsG0180003242.01.T01:CDS 35.0%
ATCTTGATGTATATCTCTGC+AGG + Chr1:58962048-58962067 MsG0180003242.01.T01:intron 35.0%
ATGGTCAGATGAGAAATTCT+AGG - Chr1:58956943-58956962 None:intergenic 35.0%
ATTAAGTTCATACAGTGAGG+AGG + Chr1:58955657-58955676 MsG0180003242.01.T01:intron 35.0%
ATTAGAATGAGGCGTAAATC+TGG - Chr1:58955975-58955994 None:intergenic 35.0%
ATTATGAGAGAAGTGGAGAT+TGG - Chr1:58952643-58952662 None:intergenic 35.0%
ATTGCAAAAACAAGGACTGT+TGG - Chr1:58957205-58957224 None:intergenic 35.0%
CAACCAATACAGTCATGATT+TGG + Chr1:58962075-58962094 MsG0180003242.01.T01:CDS 35.0%
CATACTAGTTGCATGGAATT+AGG + Chr1:58956414-58956433 MsG0180003242.01.T01:CDS 35.0%
CATCTGGCATTTGCAAAATA+AGG - Chr1:58957462-58957481 None:intergenic 35.0%
CATTACAAAAGTTACAGCTC+GGG + Chr1:58957365-58957384 MsG0180003242.01.T01:intron 35.0%
CCAAAGGAAGAATAGTGATT+TGG - Chr1:58958382-58958401 None:intergenic 35.0%
CCAAATCACTATTCTTCCTT+TGG + Chr1:58958379-58958398 MsG0180003242.01.T01:intron 35.0%
CCCATAAAAATCTTGTGTCA+GGG + Chr1:58955400-58955419 MsG0180003242.01.T01:intron 35.0%
CGAAATTGAGAACAAGGATA+TGG + Chr1:58962015-58962034 MsG0180003242.01.T01:intron 35.0%
CTAATTCCATGCAACTAGTA+TGG - Chr1:58956416-58956435 None:intergenic 35.0%
CTCTTTGTACATCTGAATCT+AGG + Chr1:58960921-58960940 MsG0180003242.01.T01:intron 35.0%
CTGTTTATAGGTAGGACAAA+TGG - Chr1:58961480-58961499 None:intergenic 35.0%
CTTGTTTAGTAAAACCCATG+TGG - Chr1:58956894-58956913 None:intergenic 35.0%
CTTTAGTGTAGAATGCTGTT+CGG - Chr1:58962168-58962187 None:intergenic 35.0%
GAAATGGATCCAACATAAAG+TGG + Chr1:58956862-58956881 MsG0180003242.01.T01:intron 35.0%
GAAGGCTCTTATACATTTGA+TGG + Chr1:58960505-58960524 MsG0180003242.01.T01:intron 35.0%
GACAAACCTGTTCAATAAAG+TGG + Chr1:58958529-58958548 MsG0180003242.01.T01:intron 35.0%
GACATACACAACATCATCTA+TGG - Chr1:58960756-58960775 None:intergenic 35.0%
GACGGTCAAATATTTCACAT+TGG - Chr1:58959881-58959900 None:intergenic 35.0%
GAGATTGCTTTATGTAAGCA+TGG - Chr1:58962503-58962522 None:intergenic 35.0%
GAGGTCTATATTACTAATGG+TGG - Chr1:58953846-58953865 None:intergenic 35.0%
GAGTCAGTTACAACTTACAA+GGG - Chr1:58953796-58953815 None:intergenic 35.0%
GATTACATTTACTGTCCAGT+TGG + Chr1:58953540-58953559 MsG0180003242.01.T01:intron 35.0%
GATTACCACCAAATAGAAGT+AGG - Chr1:58962330-58962349 None:intergenic 35.0%
GATTATGCCCTACTTCTATT+TGG + Chr1:58962319-58962338 MsG0180003242.01.T01:CDS 35.0%
GCATAAAGCAGTCAAATAGA+TGG - Chr1:58954478-58954497 None:intergenic 35.0%
GGTCAGAGTTAAACAGAAAA+TGG - Chr1:58961975-58961994 None:intergenic 35.0%
GTAGTGATGCTTGTATTGTA+TGG + Chr1:58955509-58955528 MsG0180003242.01.T01:intron 35.0%
GTGGATGAAATTCATGAAAG+AGG + Chr1:58955897-58955916 MsG0180003242.01.T01:CDS 35.0%
GTTTACTTAAAGAGTAGTCC+CGG + Chr1:58953449-58953468 MsG0180003242.01.T01:intron 35.0%
GTTTCAGCCAATAAGAAAGT+AGG - Chr1:58956821-58956840 None:intergenic 35.0%
TAAGTTTAGATGTTCACAGG+TGG - Chr1:58953905-58953924 None:intergenic 35.0%
TACCTTTGGACCCAAATATA+GGG + Chr1:58961376-58961395 MsG0180003242.01.T01:CDS 35.0%
TAGCCTACTGTTGAAGTTAT+AGG + Chr1:58957751-58957770 MsG0180003242.01.T01:intron 35.0%
TAGCTATTGAATGTTTGCCA+CGG + Chr1:58958706-58958725 MsG0180003242.01.T01:intron 35.0%
TAGGCTACTGTTGAAGTTAT+AGG - Chr1:58957738-58957757 None:intergenic 35.0%
TATATACAGCAATGATGGCA+AGG - Chr1:58957285-58957304 None:intergenic 35.0%
TATATACTAAGTAGGGCAGA+GGG - Chr1:58962246-58962265 None:intergenic 35.0%
TCATCAGAAATGTCAAAACC+TGG - Chr1:58962593-58962612 None:intergenic 35.0%
TCTCCAAATCATGACTGTAT+TGG - Chr1:58962081-58962100 None:intergenic 35.0%
TCTTTGCGCAAGTAAAAATC+AGG - Chr1:58953977-58953996 None:intergenic 35.0%
TGAACAAGCAGAGTTTATAG+TGG - Chr1:58954324-58954343 None:intergenic 35.0%
TGAATATGCAGAAATTGCGT+GGG + Chr1:58962531-58962550 MsG0180003242.01.T01:intron 35.0%
TGCATAATATATGCAAGGTC+CGG + Chr1:58958894-58958913 MsG0180003242.01.T01:intron 35.0%
TGCTGTATTTCAAACATACG+CGG + Chr1:58954495-58954514 MsG0180003242.01.T01:intron 35.0%
TGGGTATATCCCAATATTCT+TGG + Chr1:58960525-58960544 MsG0180003242.01.T01:intron 35.0%
TTACATTTACTGTCCAGTTG+GGG + Chr1:58953542-58953561 MsG0180003242.01.T01:intron 35.0%
TTAGTTGTTGGATGCTAGTT+GGG + Chr1:58956998-58957017 MsG0180003242.01.T01:intron 35.0%
TTATTTGGACATATGTGCCA+GGG + Chr1:58956147-58956166 MsG0180003242.01.T01:intron 35.0%
TTCTTGTATTTCTTACTGGC+TGG + Chr1:58959752-58959771 MsG0180003242.01.T01:intron 35.0%
TTGATAAGCCATATCAGCTA+GGG - Chr1:58953236-58953255 None:intergenic 35.0%
TTTAGTTGTTGGATGCTAGT+TGG + Chr1:58956997-58957016 MsG0180003242.01.T01:intron 35.0%
TTTATTTGGACATATGTGCC+AGG + Chr1:58956146-58956165 MsG0180003242.01.T01:intron 35.0%
TTTGTTGAAACTGGTGAAAG+AGG + Chr1:58958480-58958499 MsG0180003242.01.T01:intron 35.0%
! AAACTGGACATAAGTTGAAC+TGG + Chr1:58958755-58958774 MsG0180003242.01.T01:intron 35.0%
! AAGACATGCTGTCTTTTTCT+TGG + Chr1:58960625-58960644 MsG0180003242.01.T01:intron 35.0%
! ACATGCTTGCCTTTTATTAG+GGG - Chr1:58959907-58959926 None:intergenic 35.0%
! ACCCTGACACAAGATTTTTA+TGG - Chr1:58955404-58955423 None:intergenic 35.0%
! AGAACTTCTGAAGACAATTG+GGG + Chr1:58961217-58961236 MsG0180003242.01.T01:CDS 35.0%
! AGAGATTTTGTTGGAAAGAG+AGG - Chr1:58962450-58962469 None:intergenic 35.0%
! AGATTCTAAGAAGGATCCTT+TGG + Chr1:58956287-58956306 MsG0180003242.01.T01:CDS 35.0%
! ATACAGTCATGATTTGGAGA+TGG + Chr1:58962081-58962100 MsG0180003242.01.T01:CDS 35.0%
! ATAGCATCGTGTATCAGTTT+TGG - Chr1:58961053-58961072 None:intergenic 35.0%
! ATTTCAGGTAACTGATACTC+TGG - Chr1:58961077-58961096 None:intergenic 35.0%
! ATTTTGTGAGTTACAGAAGG+AGG + Chr1:58953108-58953127 MsG0180003242.01.T01:intron 35.0%
! CCCTGACACAAGATTTTTAT+GGG - Chr1:58955403-58955422 None:intergenic 35.0%
! CTAATTTGGTCTTTACAGGT+CGG + Chr1:58961340-58961359 MsG0180003242.01.T01:intron 35.0%
! GAAGAAATATCTTGTTTGCG+TGG + Chr1:58954959-58954978 MsG0180003242.01.T01:CDS 35.0%
! GAAGCATCTTCCCTATATTT+GGG - Chr1:58961389-58961408 None:intergenic 35.0%
! GAGATTTTGTTGGAAAGAGA+GGG - Chr1:58962449-58962468 None:intergenic 35.0%
! GGTTGAACCTTCAAACATTT+TGG + Chr1:58960061-58960080 MsG0180003242.01.T01:intron 35.0%
! TAGGGCATAATCTGAAATGT+TGG - Chr1:58962311-58962330 None:intergenic 35.0%
! TCATGACTAGCTGATTATAG+AGG - Chr1:58955284-58955303 None:intergenic 35.0%
! TCTTGGATGTTACTTGAGTT+TGG + Chr1:58960642-58960661 MsG0180003242.01.T01:intron 35.0%
! TCTTGTATTTCTTACTGGCT+GGG + Chr1:58959753-58959772 MsG0180003242.01.T01:intron 35.0%
! TCTTTTCACAATAGGTCGAA+AGG - Chr1:58960192-58960211 None:intergenic 35.0%
! TGAAGCTTTTGAACAATGGA+AGG + Chr1:58961659-58961678 MsG0180003242.01.T01:CDS 35.0%
! TGAAGTGCTTTCCCTAAAAA+TGG - Chr1:58961164-58961183 None:intergenic 35.0%
! TGAGCTAATTTGGTCTTTAC+AGG + Chr1:58961336-58961355 MsG0180003242.01.T01:intron 35.0%
! TGGGGCATTAGATAATAATG+AGG + Chr1:58961235-58961254 MsG0180003242.01.T01:CDS 35.0%
! TGGGTCATATGCTTGATTTT+TGG + Chr1:58957017-58957036 MsG0180003242.01.T01:intron 35.0%
! TTTTCTCCAACACATCTTCT+AGG - Chr1:58956200-58956219 None:intergenic 35.0%
! TTTTGCACTGCACAACATTA+GGG - Chr1:58962135-58962154 None:intergenic 35.0%
!! ACCTGACATCTACTTTTATG+TGG + Chr1:58960563-58960582 MsG0180003242.01.T01:intron 35.0%
!! AGAAGCATCTTCCCTATATT+TGG - Chr1:58961390-58961409 None:intergenic 35.0%
!! ATCGGACTTTGAAATAGAGT+AGG - Chr1:58954113-58954132 None:intergenic 35.0%
!! CTATATTACTAATGGTGGAC+TGG - Chr1:58953841-58953860 None:intergenic 35.0%
!! CTTATTAAGAGCATCATAGC+TGG - Chr1:58960804-58960823 None:intergenic 35.0%
!! GAACAAATCAGCATTGATTG+TGG - Chr1:58956003-58956022 None:intergenic 35.0%
!! GAAGGATTAAGAACTTGCTA+CGG - Chr1:58959830-58959849 None:intergenic 35.0%
!! GAGTCATTGCTTTTCATCTA+TGG + Chr1:58958456-58958475 MsG0180003242.01.T01:intron 35.0%
!! GAGTGTCATTGAGTTGATTA+AGG + Chr1:58962417-58962436 MsG0180003242.01.T01:CDS 35.0%
!! GGTTTTGACATTTCTGATGA+AGG + Chr1:58962593-58962612 MsG0180003242.01.T01:CDS 35.0%
!! TTCACAGATTGATTTGAGTC+TGG + Chr1:58957418-58957437 MsG0180003242.01.T01:intron 35.0%
!!! GTGTGCAAGTAGTTTTTTTC+CGG + Chr1:58958041-58958060 MsG0180003242.01.T01:intron 35.0%
AAATCTCTTGAAGCTTGGTC+AGG + Chr1:58957395-58957414 MsG0180003242.01.T01:intron 40.0%
AACAATTCACCATGACCGAT+GGG + Chr1:58956661-58956680 MsG0180003242.01.T01:intron 40.0%
AACCTGTTCAATAAAGTGGG+AGG + Chr1:58958533-58958552 MsG0180003242.01.T01:intron 40.0%
AAGCGAGAAGAACAGTATAG+TGG - Chr1:58958318-58958337 None:intergenic 40.0%
AAGTTGAACTGGAGTAGATC+TGG + Chr1:58958766-58958785 MsG0180003242.01.T01:intron 40.0%
AATGCACAGTTCATTCAACG+AGG - Chr1:58959160-58959179 None:intergenic 40.0%
AATGGAAGGACGCAAAAAGT+AGG + Chr1:58961673-58961692 MsG0180003242.01.T01:CDS 40.0%
ACAGACATAGAGAGAAGAGT+AGG + Chr1:58954197-58954216 MsG0180003242.01.T01:CDS 40.0%
ACAGTCAACCTCACAATCAA+CGG + Chr1:58954238-58954257 MsG0180003242.01.T01:CDS 40.0%
ACGATATTGAGGGGAATTCA+AGG + Chr1:58956247-58956266 MsG0180003242.01.T01:CDS 40.0%
ACTGGAGGGAAATAGAAAAC+TGG + Chr1:58958739-58958758 MsG0180003242.01.T01:intron 40.0%
AGAAGCAAACATTAACCGCA+GGG - Chr1:58953475-58953494 None:intergenic 40.0%
AGCAACACGAATAAGGAAGA+TGG - Chr1:58959603-58959622 None:intergenic 40.0%
AGCTATTGAATGTTTGCCAC+GGG + Chr1:58958707-58958726 MsG0180003242.01.T01:intron 40.0%
AGGTGCTTGATGAGAAAGAA+TGG + Chr1:58953128-58953147 MsG0180003242.01.T01:CDS 40.0%
ATAGGGAAGATGCTTCTCAT+GGG + Chr1:58961393-58961412 MsG0180003242.01.T01:CDS 40.0%
ATATGTCGAAATGAAGGTGG+TGG + Chr1:58959724-58959743 MsG0180003242.01.T01:intron 40.0%
ATCAACGTCCTGCAAAAACA+AGG - Chr1:58957336-58957355 None:intergenic 40.0%
ATGCTATCAGAAAGACCCAT+CGG - Chr1:58956679-58956698 None:intergenic 40.0%
ATGGAAGGACGCAAAAAGTA+GGG + Chr1:58961674-58961693 MsG0180003242.01.T01:CDS 40.0%
ATGTTGTGCAGTGCAAAAGA+AGG + Chr1:58962137-58962156 MsG0180003242.01.T01:CDS 40.0%
ATTCATACAGTGAGTAGGAG+AGG + Chr1:58955551-58955570 MsG0180003242.01.T01:intron 40.0%
ATTCTTGAAGTCACGACGTA+TGG - Chr1:58956962-58956981 None:intergenic 40.0%
ATTTCACATTGGTCGATGGT+AGG - Chr1:58959870-58959889 None:intergenic 40.0%
CACATTAAAAGCTTGCAGCT+GGG + Chr1:58961128-58961147 MsG0180003242.01.T01:CDS 40.0%
CACTAAATAGGGAGAGAAGA+TGG - Chr1:58961881-58961900 None:intergenic 40.0%
CAGTAAAATCTGACTGGTGT+TGG + Chr1:58954865-58954884 MsG0180003242.01.T01:intron 40.0%
CATATCATCAATCAACCGCA+AGG - Chr1:58961745-58961764 None:intergenic 40.0%
CATCACTACAACAATCTGCA+GGG - Chr1:58955498-58955517 None:intergenic 40.0%
CATTCTACACTAAAGAAGCC+GGG + Chr1:58962173-58962192 MsG0180003242.01.T01:CDS 40.0%
CATTGCATGACTTGAATCTG+TGG + Chr1:58960447-58960466 MsG0180003242.01.T01:intron 40.0%
CCTGGGTCACAATTTATTCA+GGG - Chr1:58960155-58960174 None:intergenic 40.0%
CCTTCTGCATCAACTGATAT+GGG + Chr1:58954281-58954300 MsG0180003242.01.T01:CDS 40.0%
CCTTTGCACTCAGTTATAAC+CGG - Chr1:58958063-58958082 None:intergenic 40.0%
CGGTTATAACTGAGTGCAAA+GGG + Chr1:58958061-58958080 MsG0180003242.01.T01:intron 40.0%
CTATATACTAAGTAGGGCAG+AGG - Chr1:58962247-58962266 None:intergenic 40.0%
CTGAATATGCAGAAATTGCG+TGG + Chr1:58962530-58962549 MsG0180003242.01.T01:intron 40.0%
GAAACTCTTGGCAAAACTGT+TGG + Chr1:58955064-58955083 MsG0180003242.01.T01:CDS 40.0%
GAAAGCAGTTCAAGGAAATC+AGG + Chr1:58954608-58954627 MsG0180003242.01.T01:CDS 40.0%
GAATATGCAGAAATTGCGTG+GGG + Chr1:58962532-58962551 MsG0180003242.01.T01:intron 40.0%
GACCCAAGAAACAAAATCAG+TGG - Chr1:58956456-58956475 None:intergenic 40.0%
GATGAGAGTGAAAGTTAGGT+CGG - Chr1:58952570-58952589 None:intergenic 40.0%
GATTATTCAATCTCAGCCAC+TGG - Chr1:58958182-58958201 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+GGG + Chr1:58958895-58958914 MsG0180003242.01.T01:intron 40.0%
GCATCTTTGTACTGTACCTT+TGG + Chr1:58961362-58961381 MsG0180003242.01.T01:CDS 40.0%
GCATTCTACACTAAAGAAGC+CGG + Chr1:58962172-58962191 MsG0180003242.01.T01:CDS 40.0%
GCATTGAACCATGTATTGGA+AGG - Chr1:58959848-58959867 None:intergenic 40.0%
GCATTTCCTAGAAGATGTGT+TGG + Chr1:58956191-58956210 MsG0180003242.01.T01:CDS 40.0%
GCCACATAAAAGTAGATGTC+AGG - Chr1:58960567-58960586 None:intergenic 40.0%
GCCCATAAAAATCTTGTGTC+AGG + Chr1:58955399-58955418 MsG0180003242.01.T01:intron 40.0%
GGAAAGTCTCTTAACTCAGT+GGG + Chr1:58957518-58957537 MsG0180003242.01.T01:intron 40.0%
GGCATAGAGCAACACAAATA+AGG - Chr1:58959228-58959247 None:intergenic 40.0%
GTAATTACATGTGTCTGGGT+TGG + Chr1:58952969-58952988 MsG0180003242.01.T01:intron 40.0%
GTACCTTTGGACCCAAATAT+AGG + Chr1:58961375-58961394 MsG0180003242.01.T01:CDS 40.0%
GTAGGACATTATGAGAGAAG+TGG - Chr1:58952650-58952669 None:intergenic 40.0%
GTATAAGAGCCTTCTTGCAA+TGG - Chr1:58960499-58960518 None:intergenic 40.0%
GTGCAAAATGAACCCCTATT+AGG - Chr1:58963001-58963020 None:intergenic 40.0%
GTGGCAAACATTCAATAGCT+AGG - Chr1:58958707-58958726 None:intergenic 40.0%
GTTCAATAAAGTGGGAGGAA+CGG + Chr1:58958538-58958557 MsG0180003242.01.T01:intron 40.0%
GTTGCCATCATGGATTTCAA+AGG + Chr1:58960835-58960854 MsG0180003242.01.T01:CDS 40.0%
GTTGTGTATGTCATAGACTG+TGG + Chr1:58960764-58960783 MsG0180003242.01.T01:CDS 40.0%
GTTTAGGAGGATGTCTATCA+AGG - Chr1:58960229-58960248 None:intergenic 40.0%
GTTTGTGCAATTCTTTGTGC+TGG + Chr1:58962103-58962122 MsG0180003242.01.T01:CDS 40.0%
TAACAATTCACCATGACCGA+TGG + Chr1:58956660-58956679 MsG0180003242.01.T01:intron 40.0%
TACTCTTCTCTCTATGTCTG+TGG - Chr1:58954198-58954217 None:intergenic 40.0%
TAGAAGCAAACATTAACCGC+AGG - Chr1:58953476-58953495 None:intergenic 40.0%
TAGAGCTTAGTAGTAGCTAC+TGG + Chr1:58957700-58957719 MsG0180003242.01.T01:intron 40.0%
TATAGGGAAGATGCTTCTCA+TGG + Chr1:58961392-58961411 MsG0180003242.01.T01:CDS 40.0%
TATGCCCTACTTCTATTTGG+TGG + Chr1:58962322-58962341 MsG0180003242.01.T01:CDS 40.0%
TCCTGGGTCACAATTTATTC+AGG - Chr1:58960156-58960175 None:intergenic 40.0%
TCCTTTGGCTGAAATGTTTG+AGG + Chr1:58956302-58956321 MsG0180003242.01.T01:CDS 40.0%
TCTTCACCATACTAGTTGCA+TGG + Chr1:58956407-58956426 MsG0180003242.01.T01:CDS 40.0%
TCTTCTTCCAGAATGAACTG+TGG - Chr1:58954944-58954963 None:intergenic 40.0%
TCTTGAAGCAAAACGTTCTG+CGG + Chr1:58955099-58955118 MsG0180003242.01.T01:CDS 40.0%
TCTTGGAAGCAGAGAAATGA+AGG - Chr1:58962399-58962418 None:intergenic 40.0%
TGCTTGATGAGAAAGAATGG+TGG + Chr1:58953131-58953150 MsG0180003242.01.T01:CDS 40.0%
TGGCTGTGTATAGCAAAAGT+AGG + Chr1:58953652-58953671 MsG0180003242.01.T01:intron 40.0%
TGTGTATTGCATGCAATCTG+AGG - Chr1:58953865-58953884 None:intergenic 40.0%
TGTTGTGCAGTGCAAAAGAA+GGG + Chr1:58962138-58962157 MsG0180003242.01.T01:CDS 40.0%
TTCCCTATATTTGGGTCCAA+AGG - Chr1:58961381-58961400 None:intergenic 40.0%
TTCCTCCCACTTTATTGAAC+AGG - Chr1:58958538-58958557 None:intergenic 40.0%
TTCTGAACAGCAAGAGAATC+TGG - Chr1:58961191-58961210 None:intergenic 40.0%
TTCTGATGAAGGAAAAGCAG+TGG + Chr1:58962604-58962623 MsG0180003242.01.T01:CDS 40.0%
TTGTGGCACTCATTAGAATG+AGG - Chr1:58955986-58956005 None:intergenic 40.0%
! AATTAATGGGTATGGCGACT+TGG - Chr1:58955319-58955338 None:intergenic 40.0%
! AGCTCGTATTTCTGCTGAAA+GGG + Chr1:58955039-58955058 MsG0180003242.01.T01:CDS 40.0%
! AGTTTTCTATTTCCCTCCAG+TGG - Chr1:58958740-58958759 None:intergenic 40.0%
! ATGCATTCGATCAGAAGTGT+CGG + Chr1:58953026-58953045 MsG0180003242.01.T01:intron 40.0%
! ATGTTTTTCCTGACAGCCAA+TGG + Chr1:58955796-58955815 MsG0180003242.01.T01:intron 40.0%
! CAGAACGTTTTGCTTCAAGA+CGG - Chr1:58955099-58955118 None:intergenic 40.0%
! CATGCTTGCCTTTTATTAGG+GGG - Chr1:58959906-58959925 None:intergenic 40.0%
! CTTTTGCACTGCACAACATT+AGG - Chr1:58962136-58962155 None:intergenic 40.0%
! GAGTTTCTGAAAGCAGTTCA+AGG + Chr1:58954600-58954619 MsG0180003242.01.T01:CDS 40.0%
! GTTGATAAGCCATATCAGCT+AGG - Chr1:58953237-58953256 None:intergenic 40.0%
! TGATAGTGACAGAGTCGATA+TGG + Chr1:58956572-58956591 MsG0180003242.01.T01:intron 40.0%
!! ACAACTCTTGCAAAGGTGTT+CGG - Chr1:58961103-58961122 None:intergenic 40.0%
!! AGTCGATATGGTGTTACTGT+TGG + Chr1:58956584-58956603 MsG0180003242.01.T01:intron 40.0%
!! GAACTGTGGCACCATTTTTA+GGG + Chr1:58961150-58961169 MsG0180003242.01.T01:CDS 40.0%
!! GAAGCCTTTGAAATCCATGA+TGG - Chr1:58960842-58960861 None:intergenic 40.0%
!! GGGTTTGTTGACAAGTCAAA+GGG + Chr1:58961798-58961817 MsG0180003242.01.T01:CDS 40.0%
!! GTAGGCATTGAACCATGTAT+TGG - Chr1:58959852-58959871 None:intergenic 40.0%
!! GTCGATATGGTGTTACTGTT+GGG + Chr1:58956585-58956604 MsG0180003242.01.T01:intron 40.0%
!! TACTTTTGCTATACACAGCC+AGG - Chr1:58953653-58953672 None:intergenic 40.0%
!! TGGGTTTGTTGACAAGTCAA+AGG + Chr1:58961797-58961816 MsG0180003242.01.T01:CDS 40.0%
!!! CTTTTTTTTTTGGTGGTGGC+CGG - Chr1:58958929-58958948 None:intergenic 40.0%
!!! GAGAGGAGCATTTTATACGA+AGG - Chr1:58957112-58957131 None:intergenic 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG - Chr1:58958928-58958947 None:intergenic 40.0%
AAATGGGACAAGGGCTTACT+TGG - Chr1:58961827-58961846 None:intergenic 45.0%
AACCTCACAATCAACGGCTA+CGG + Chr1:58954244-58954263 MsG0180003242.01.T01:CDS 45.0%
AACTCCGGCATTAACAGAAG+AGG - Chr1:58962215-58962234 None:intergenic 45.0%
AACTCCTCATCTTCCAATCG+CGG + Chr1:58952703-58952722 MsG0180003242.01.T01:CDS 45.0%
AAGAGCCTTCTTGCAATGGT+CGG - Chr1:58960495-58960514 None:intergenic 45.0%
AATCCATGATGGCAACAAGC+TGG - Chr1:58960831-58960850 None:intergenic 45.0%
AATGAAAAGAGGAGGGGAAC+AGG + Chr1:58953168-58953187 MsG0180003242.01.T01:CDS 45.0%
AATGAGGAGCTTACTCCACT+GGG + Chr1:58961251-58961270 MsG0180003242.01.T01:CDS 45.0%
ACTCCGGCATTAACAGAAGA+GGG - Chr1:58962214-58962233 None:intergenic 45.0%
ACTGTCACAGACACATGACA+CGG + Chr1:58952878-58952897 MsG0180003242.01.T01:intron 45.0%
AGAAGAAGTTTGTGTGCGTG+GGG - Chr1:58952610-58952629 None:intergenic 45.0%
AGAAGTGGAGATTGGAAGGT+TGG - Chr1:58952635-58952654 None:intergenic 45.0%
AGAGAAGAAGTTTGTGTGCG+TGG - Chr1:58952612-58952631 None:intergenic 45.0%
AGGAGGAAGAGGGATGATAT+TGG + Chr1:58962836-58962855 MsG0180003242.01.T01:three_prime_UTR 45.0%
ATAAAGTGGTGAGACCCACA+TGG + Chr1:58956876-58956895 MsG0180003242.01.T01:intron 45.0%
ATTGAAAACGTGCAGGCAAG+TGG + Chr1:58954519-58954538 MsG0180003242.01.T01:intron 45.0%
ATTGGGCCACATATACCCAT+TGG + Chr1:58962854-58962873 MsG0180003242.01.T01:three_prime_UTR 45.0%
CACCAGTGGTGCAAAAAAGA+AGG - Chr1:58955132-58955151 None:intergenic 45.0%
CAGTTCAAGGAAATCAGGTG+TGG + Chr1:58954613-58954632 MsG0180003242.01.T01:intron 45.0%
CATAGACTGTGGCAAAGCAA+AGG + Chr1:58960775-58960794 MsG0180003242.01.T01:CDS 45.0%
CATCCCTCTTCTGTTAATGC+CGG + Chr1:58962208-58962227 MsG0180003242.01.T01:CDS 45.0%
CCAGAGCAAAAGGAGTTCAA+TGG + Chr1:58958641-58958660 MsG0180003242.01.T01:intron 45.0%
CCCTGAATAAATTGTGACCC+AGG + Chr1:58960152-58960171 MsG0180003242.01.T01:intron 45.0%
CCGGTTATAACTGAGTGCAA+AGG + Chr1:58958060-58958079 MsG0180003242.01.T01:intron 45.0%
CCTTAGACAACAACAAGCAG+AGG + Chr1:58952834-58952853 MsG0180003242.01.T01:CDS 45.0%
CGAGAAGAACAGTATAGTGG+AGG - Chr1:58958315-58958334 None:intergenic 45.0%
CGTTCATCGGTGAAGAGAAA+TGG - Chr1:58958140-58958159 None:intergenic 45.0%
CTCAAAGGGGAACTTGTGAA+TGG + Chr1:58960086-58960105 MsG0180003242.01.T01:intron 45.0%
CTCCACTGGGTATATTGTAC+TGG + Chr1:58961264-58961283 MsG0180003242.01.T01:intron 45.0%
CTTCTGATCGAATGCATGTC+TGG - Chr1:58953023-58953042 None:intergenic 45.0%
CTTTGACAGTGCTTCTGATG+AGG + Chr1:58957054-58957073 MsG0180003242.01.T01:intron 45.0%
CTTTGCCACCTATCGTTCAT+CGG - Chr1:58958153-58958172 None:intergenic 45.0%
GAAACTCAGTGTTGCACTCA+AGG + Chr1:58954367-58954386 MsG0180003242.01.T01:CDS 45.0%
GAAGCAGCAATAGTTAAGGC+AGG - Chr1:58961441-58961460 None:intergenic 45.0%
GACCCTAGCAAAAATGGTGA+GGG + Chr1:58962352-58962371 MsG0180003242.01.T01:CDS 45.0%
GAGAAGAAGTTTGTGTGCGT+GGG - Chr1:58952611-58952630 None:intergenic 45.0%
GAGCAAAAGGAGTTCAATGG+CGG + Chr1:58958644-58958663 MsG0180003242.01.T01:intron 45.0%
GAGTAGGAGAGGATGTAGTT+AGG + Chr1:58955562-58955581 MsG0180003242.01.T01:intron 45.0%
GCACATTAAAAGCTTGCAGC+TGG + Chr1:58961127-58961146 MsG0180003242.01.T01:CDS 45.0%
GCATCACTACAACAATCTGC+AGG - Chr1:58955499-58955518 None:intergenic 45.0%
GCCTCAAACATTTCAGCCAA+AGG - Chr1:58956306-58956325 None:intergenic 45.0%
GCCTTCTGCATCAACTGATA+TGG + Chr1:58954280-58954299 MsG0180003242.01.T01:CDS 45.0%
GGAGGAAGAGGGATGATATT+GGG + Chr1:58962837-58962856 MsG0180003242.01.T01:three_prime_UTR 45.0%
GGCATAGAGCAACACGAATA+AGG - Chr1:58959610-58959629 None:intergenic 45.0%
GGGAAAGTCTCTTAACTCAG+TGG + Chr1:58957517-58957536 MsG0180003242.01.T01:intron 45.0%
GGTAGACTATTTCAGAGACG+TGG + Chr1:58960984-58961003 MsG0180003242.01.T01:intron 45.0%
GGTCGAAAGGAGTCTTGATT+TGG - Chr1:58960179-58960198 None:intergenic 45.0%
GTACAAGATCCAGAGTTGAC+TGG + Chr1:58955858-58955877 MsG0180003242.01.T01:CDS 45.0%
GTCCAGTACAATATACCCAG+TGG - Chr1:58961269-58961288 None:intergenic 45.0%
GTGAAAGTTAGGTCGGAGAA+AGG - Chr1:58952563-58952582 None:intergenic 45.0%
GTTGTGCAGTGCAAAAGAAG+GGG + Chr1:58962139-58962158 MsG0180003242.01.T01:CDS 45.0%
TAAAGTGGTGAGACCCACAT+GGG + Chr1:58956877-58956896 MsG0180003242.01.T01:intron 45.0%
TAATGAGGAGCTTACTCCAC+TGG + Chr1:58961250-58961269 MsG0180003242.01.T01:CDS 45.0%
TAGTACTCAACAAGGGAAGG+AGG + Chr1:58962819-58962838 MsG0180003242.01.T01:three_prime_UTR 45.0%
TATGGCCATGATGAGTGCTA+TGG + Chr1:58956768-58956787 MsG0180003242.01.T01:intron 45.0%
TCAGTGTTGCACTCAAGGAA+AGG + Chr1:58954372-58954391 MsG0180003242.01.T01:CDS 45.0%
TCATGGATCAACACAGAAGG+AGG + Chr1:58954078-58954097 MsG0180003242.01.T01:CDS 45.0%
TCGGAGTCTGACGATATTGA+GGG + Chr1:58956237-58956256 MsG0180003242.01.T01:CDS 45.0%
TCTCTTCACCGATGAACGAT+AGG + Chr1:58958142-58958161 MsG0180003242.01.T01:intron 45.0%
TGAACAGCAAGAGAATCTGG+CGG - Chr1:58961188-58961207 None:intergenic 45.0%
TGACCCTAGCAAAAATGGTG+AGG + Chr1:58962351-58962370 MsG0180003242.01.T01:CDS 45.0%
TGACTAACACCAGTCAACTC+TGG - Chr1:58955870-58955889 None:intergenic 45.0%
TGAGAGAAGTGGAGATTGGA+AGG - Chr1:58952639-58952658 None:intergenic 45.0%
TGGAAGGACGCAAAAAGTAG+GGG + Chr1:58961675-58961694 MsG0180003242.01.T01:CDS 45.0%
TGGGTCTCACCACTTTATGT+TGG - Chr1:58956874-58956893 None:intergenic 45.0%
TTGATCCATGACGCTCATCA+AGG - Chr1:58954069-58954088 None:intergenic 45.0%
TTTCTATTTCCCTCCAGTGG+AGG - Chr1:58958737-58958756 None:intergenic 45.0%
! ACAAGGACTGTTGGCTACAA+AGG - Chr1:58957196-58957215 None:intergenic 45.0%
! CAGCTCGTATTTCTGCTGAA+AGG + Chr1:58955038-58955057 MsG0180003242.01.T01:CDS 45.0%
! CCATTGAACTCCTTTTGCTC+TGG - Chr1:58958644-58958663 None:intergenic 45.0%
! CCCATATCAGTTGATGCAGA+AGG - Chr1:58954284-58954303 None:intergenic 45.0%
! CTTATTGGCTGAAACCCATG+CGG + Chr1:58956826-58956845 MsG0180003242.01.T01:intron 45.0%
! GACTGGTGTTAGTCATTTGC+TGG + Chr1:58955875-58955894 MsG0180003242.01.T01:CDS 45.0%
! GCTCGTATTTCTGCTGAAAG+GGG + Chr1:58955040-58955059 MsG0180003242.01.T01:CDS 45.0%
! GCTGCAAGCTTTTAATGTGC+AGG - Chr1:58961127-58961146 None:intergenic 45.0%
! GTTTTGCTTCAAGACGGATG+TGG - Chr1:58955093-58955112 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + Chr1:58958867-58958886 MsG0180003242.01.T01:intron 45.0%
! TGATGGCAAGGGTATGACAT+TGG - Chr1:58957273-58957292 None:intergenic 45.0%
! TGGTGTTAGTCATTTGCTGG+TGG + Chr1:58955878-58955897 MsG0180003242.01.T01:CDS 45.0%
! TTATTGGCTGAAACCCATGC+GGG + Chr1:58956827-58956846 MsG0180003242.01.T01:intron 45.0%
! TTTTACGCGACCTTCTTCCT+CGG + Chr1:58955946-58955965 MsG0180003242.01.T01:CDS 45.0%
!! AAAGGTGTTCGGAGGATTTC+AGG - Chr1:58961092-58961111 None:intergenic 45.0%
!! AAGGAGTCTTGATTTGGTCC+TGG - Chr1:58960173-58960192 None:intergenic 45.0%
!! AGGAGTCTTGATTTGGTCCT+GGG - Chr1:58960172-58960191 None:intergenic 45.0%
!! ATGCCCTCACCATTTTTGCT+AGG - Chr1:58962358-58962377 None:intergenic 45.0%
!! CCTCTGCTTGTTGTTGTCTA+AGG - Chr1:58952837-58952856 None:intergenic 45.0%
!! GACAAGCGATTTTGGTGTAG+TGG + Chr1:58956725-58956744 MsG0180003242.01.T01:intron 45.0%
!! GGAACTGTGGCACCATTTTT+AGG + Chr1:58961149-58961168 MsG0180003242.01.T01:CDS 45.0%
!! GGTGCAGGTATTGGTAGTTT+CGG + Chr1:58954886-58954905 MsG0180003242.01.T01:intron 45.0%
!! GTCAAGTATGGTTTGGTTCG+AGG - Chr1:58953584-58953603 None:intergenic 45.0%
!! GTGCAGGTATTGGTAGTTTC+GGG + Chr1:58954887-58954906 MsG0180003242.01.T01:intron 45.0%
!! TAGGTAGGACAAATGGGTTG+CGG - Chr1:58961473-58961492 None:intergenic 45.0%
!! TGCCCTCACCATTTTTGCTA+GGG - Chr1:58962357-58962376 None:intergenic 45.0%
!! TGTGGTGGGTTGGAGATTTA+AGG + Chr1:58957077-58957096 MsG0180003242.01.T01:intron 45.0%
!!! CTTTTTCTGCTGACTCTTGC+AGG + Chr1:58961529-58961548 MsG0180003242.01.T01:CDS 45.0%
!!! GCACATCTCCTTGTTTTTGC+AGG + Chr1:58957325-58957344 MsG0180003242.01.T01:intron 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+GGG - Chr1:58958927-58958946 None:intergenic 45.0%
!!! AGTTTTAAAAAAATTAATTA+AGG - Chr1:58957913-58957932 None:intergenic 5.0%
!!! ATTAATATTTTTAAAGAAAA+TGG - Chr1:58961844-58961863 None:intergenic 5.0%
!!! GTTTTAAAAAAATTAATTAA+GGG - Chr1:58957912-58957931 None:intergenic 5.0%
!!! TTAATATTTTTAAAGAAAAT+GGG - Chr1:58961843-58961862 None:intergenic 5.0%
AAGAAGAGAAGAGTGGCGAC+AGG - Chr1:58958343-58958362 None:intergenic 50.0%
AAGATGAGGAGTTGCCTCTG+CGG - Chr1:58952696-58952715 None:intergenic 50.0%
AATCAACCGCAAGGTCACTG+GGG - Chr1:58961736-58961755 None:intergenic 50.0%
ACAGCTGCCACAGTTCATTC+TGG + Chr1:58954934-58954953 MsG0180003242.01.T01:CDS 50.0%
ACAGTGCTTCTGATGAGGTG+TGG + Chr1:58957059-58957078 MsG0180003242.01.T01:intron 50.0%
ACCGTCCTCCCCCTAATAAA+AGG + Chr1:58959895-58959914 MsG0180003242.01.T01:intron 50.0%
ACTCAAGGAAAGGCAGGAAC+TGG + Chr1:58954382-58954401 MsG0180003242.01.T01:CDS 50.0%
CAACAAGGGAAGGAGGAAGA+GGG + Chr1:58962826-58962845 MsG0180003242.01.T01:three_prime_UTR 50.0%
CAACTCCGACCATTGCAAGA+AGG + Chr1:58960487-58960506 MsG0180003242.01.T01:intron 50.0%
CAATCAACCGCAAGGTCACT+GGG - Chr1:58961737-58961756 None:intergenic 50.0%
CACGTCAGGTATAGAAGCTG+TGG + Chr1:58960864-58960883 MsG0180003242.01.T01:intron 50.0%
CAGAGGGAAGGAATGAACTC+CGG - Chr1:58962230-58962249 None:intergenic 50.0%
CCACAGGGAAAGTAAATCCC+TGG - Chr1:58956167-58956186 None:intergenic 50.0%
CCAGCAAACCCTAGCTGATA+TGG + Chr1:58953225-58953244 MsG0180003242.01.T01:CDS 50.0%
CCAGGGATTTACTTTCCCTG+TGG + Chr1:58956164-58956183 MsG0180003242.01.T01:intron 50.0%
CCATATCAGCTAGGGTTTGC+TGG - Chr1:58953228-58953247 None:intergenic 50.0%
CGCCACTCTTCTCTTCTTCT+CGG + Chr1:58958345-58958364 MsG0180003242.01.T01:intron 50.0%
CGGAGTCTGACGATATTGAG+GGG + Chr1:58956238-58956257 MsG0180003242.01.T01:CDS 50.0%
CGTGTCCATAGCACTCATCA+TGG - Chr1:58956776-58956795 None:intergenic 50.0%
CTACACTAAAGAAGCCGGGA+AGG + Chr1:58962177-58962196 MsG0180003242.01.T01:CDS 50.0%
CTAGGAAATGCTCCACCACA+GGG - Chr1:58956182-58956201 None:intergenic 50.0%
CTGGACATGCTTGTCTTCTC+AGG + Chr1:58961283-58961302 MsG0180003242.01.T01:intron 50.0%
CTTCACCGATGAACGATAGG+TGG + Chr1:58958145-58958164 MsG0180003242.01.T01:intron 50.0%
CTTCTTGCAATGGTCGGAGT+TGG - Chr1:58960489-58960508 None:intergenic 50.0%
GAACTGGAGTAGATCTGGAG+TGG + Chr1:58958771-58958790 MsG0180003242.01.T01:intron 50.0%
GAAGAAGTTTGTGTGCGTGG+GGG - Chr1:58952609-58952628 None:intergenic 50.0%
GAAGGACGCAAAAAGTAGGG+GGG + Chr1:58961677-58961696 MsG0180003242.01.T01:CDS 50.0%
GCACCACTGGTGTATTACTG+CGG + Chr1:58955140-58955159 MsG0180003242.01.T01:CDS 50.0%
GCAGGCAAGTGGTAGTTTGA+AGG + Chr1:58954530-58954549 MsG0180003242.01.T01:intron 50.0%
GCGTCATGGATCAACACAGA+AGG + Chr1:58954075-58954094 MsG0180003242.01.T01:CDS 50.0%
GCTGAAAGGGGAGAAACTCT+TGG + Chr1:58955052-58955071 MsG0180003242.01.T01:CDS 50.0%
GCTGCTAGATCCAGAGCAAA+AGG + Chr1:58958631-58958650 MsG0180003242.01.T01:intron 50.0%
GGAAGGACGCAAAAAGTAGG+GGG + Chr1:58961676-58961695 MsG0180003242.01.T01:CDS 50.0%
GGGATGAATGTCAACCTTCC+CGG - Chr1:58962194-58962213 None:intergenic 50.0%
GGGATTTACTTTCCCTGTGG+TGG + Chr1:58956167-58956186 MsG0180003242.01.T01:intron 50.0%
GTCCGAGAAGAAGAGAAGAG+TGG - Chr1:58958350-58958369 None:intergenic 50.0%
GTCGGAGTCTGACGATATTG+AGG + Chr1:58956236-58956255 MsG0180003242.01.T01:CDS 50.0%
TAAGAGACTTTCCCCACAGC+CGG - Chr1:58957511-58957530 None:intergenic 50.0%
TACTAAGTAGGGCAGAGGGA+AGG - Chr1:58962242-58962261 None:intergenic 50.0%
TCAACAAGGGAAGGAGGAAG+AGG + Chr1:58962825-58962844 MsG0180003242.01.T01:three_prime_UTR 50.0%
TCAAGGTCTGCACGGTAATC+AGG - Chr1:58954052-58954071 None:intergenic 50.0%
TCAATCAACCGCAAGGTCAC+TGG - Chr1:58961738-58961757 None:intergenic 50.0%
TCAGAAAGACCCATCGGTCA+TGG - Chr1:58956673-58956692 None:intergenic 50.0%
TCTAGGAAATGCTCCACCAC+AGG - Chr1:58956183-58956202 None:intergenic 50.0%
TCTGCACGGTAATCAGGCAA+AGG - Chr1:58954046-58954065 None:intergenic 50.0%
TGCAGGCACAACTCTTGCAA+AGG - Chr1:58961110-58961129 None:intergenic 50.0%
TGCTTCTGATGAGGTGTGGT+GGG + Chr1:58957063-58957082 MsG0180003242.01.T01:intron 50.0%
TGGATCAACACAGAAGGAGG+TGG + Chr1:58954081-58954100 MsG0180003242.01.T01:intron 50.0%
TGGTGTATTACTGCGGCAAC+TGG + Chr1:58955147-58955166 MsG0180003242.01.T01:CDS 50.0%
TGTTGCACTCAAGGAAAGGC+AGG + Chr1:58954376-58954395 MsG0180003242.01.T01:CDS 50.0%
TTGCCGCAGTAATACACCAG+TGG - Chr1:58955146-58955165 None:intergenic 50.0%
! ACGCGGTATTGAAAACGTGC+AGG + Chr1:58954512-58954531 MsG0180003242.01.T01:intron 50.0%
! AGTGAACACCATTGGCTGTC+AGG - Chr1:58955807-58955826 None:intergenic 50.0%
! CGGGTCTCACACTTTGGAAA+TGG + Chr1:58956846-58956865 MsG0180003242.01.T01:intron 50.0%
! GCCTTTTATTAGGGGGAGGA+CGG - Chr1:58959899-58959918 None:intergenic 50.0%
! GCTTGCCTTTTATTAGGGGG+AGG - Chr1:58959903-58959922 None:intergenic 50.0%
! GGCAAGGGTATGACATTGGT+AGG - Chr1:58957269-58957288 None:intergenic 50.0%
! TTGGTAGTTTCGGGAGAGAC+AGG + Chr1:58954896-58954915 MsG0180003242.01.T01:CDS 50.0%
!! AATCTGACTGGTGTTGGTGC+AGG + Chr1:58954871-58954890 MsG0180003242.01.T01:intron 50.0%
!! AATTAGAGGTACCGGCTGTG+GGG + Chr1:58957497-58957516 MsG0180003242.01.T01:intron 50.0%
!! ACTCTTGCAAAGGTGTTCGG+AGG - Chr1:58961100-58961119 None:intergenic 50.0%
!! ACTGGTGTTGGTGCAGGTAT+TGG + Chr1:58954877-58954896 MsG0180003242.01.T01:intron 50.0%
!! GAAGTGTCGGTGCTACAAAG+AGG + Chr1:58953039-58953058 MsG0180003242.01.T01:intron 50.0%
!! GAATTAGAGGTACCGGCTGT+GGG + Chr1:58957496-58957515 MsG0180003242.01.T01:intron 50.0%
!! GTGAGGGCATTGAGATGCTT+GGG + Chr1:58962368-58962387 MsG0180003242.01.T01:CDS 50.0%
!! TGAATTAGAGGTACCGGCTG+TGG + Chr1:58957495-58957514 MsG0180003242.01.T01:intron 50.0%
!! TGAGGGCATTGAGATGCTTG+GGG + Chr1:58962369-58962388 MsG0180003242.01.T01:CDS 50.0%
!! TTGCCAGCTTGTTGCCATCA+TGG + Chr1:58960825-58960844 MsG0180003242.01.T01:CDS 50.0%
!!! CGCCTTCTTTTTTGCACCAC+TGG + Chr1:58955127-58955146 MsG0180003242.01.T01:CDS 50.0%
AAGAGGAGGGGAACAGGAGT+TGG + Chr1:58953174-58953193 MsG0180003242.01.T01:CDS 55.0%
AAGCTTGCAGCTGGGAACTG+TGG + Chr1:58961136-58961155 MsG0180003242.01.T01:CDS 55.0%
AATCTGGACGCCGAGGAAGA+AGG - Chr1:58955959-58955978 None:intergenic 55.0%
ACCATCTCTGTTCGCCACCT+CGG - Chr1:58952789-58952808 None:intergenic 55.0%
AGGTGGCGAACAGAGATGGT+GGG + Chr1:58952789-58952808 MsG0180003242.01.T01:CDS 55.0%
ATCCTCAGACAGACCCCAAC+TGG - Chr1:58953558-58953577 None:intergenic 55.0%
CAAACATTAACCGCAGGGCC+GGG - Chr1:58953470-58953489 None:intergenic 55.0%
CCAAAGTGTGAGACCCGCAT+GGG - Chr1:58956843-58956862 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - Chr1:58958865-58958884 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + Chr1:58958862-58958881 MsG0180003242.01.T01:intron 55.0%
CTAAGCTCACGAGGACGGAA+AGG - Chr1:58958856-58958875 None:intergenic 55.0%
CTGAGCTAAGCTCACGAGGA+CGG - Chr1:58958861-58958880 None:intergenic 55.0%
GACGCTCATCAAGGTCTGCA+CGG - Chr1:58954060-58954079 None:intergenic 55.0%
GAGATTGCAGACACACGACG+AGG - Chr1:58955013-58955032 None:intergenic 55.0%
GCAAACATTAACCGCAGGGC+CGG - Chr1:58953471-58953490 None:intergenic 55.0%
GCACAAAGAACCGTCAGCCT+TGG - Chr1:58962683-58962702 None:intergenic 55.0%
GCAGACCTTGATGAGCGTCA+TGG + Chr1:58954061-58954080 MsG0180003242.01.T01:CDS 55.0%
GCAGGGCAGAAGGGTTTGAT+GGG - Chr1:58958255-58958274 None:intergenic 55.0%
GGTGGCAAAGCAGTATCCAG+TGG + Chr1:58958163-58958182 MsG0180003242.01.T01:intron 55.0%
GTGCTTCTGATGAGGTGTGG+TGG + Chr1:58957062-58957081 MsG0180003242.01.T01:intron 55.0%
TACCGCCCTAACTACCAAGG+CGG + Chr1:58952667-58952686 MsG0180003242.01.T01:CDS 55.0%
TCCAAAGTGTGAGACCCGCA+TGG - Chr1:58956844-58956863 None:intergenic 55.0%
TCCTACCGCCCTAACTACCA+AGG + Chr1:58952664-58952683 MsG0180003242.01.T01:CDS 55.0%
TCCTATCCCCAGTGACCTTG+CGG + Chr1:58961727-58961746 MsG0180003242.01.T01:CDS 55.0%
TCCTCATCTTCCAATCGCGG+CGG + Chr1:58952706-58952725 MsG0180003242.01.T01:CDS 55.0%
TGGAGGACGACACTGCAAGA+CGG - Chr1:58958298-58958317 None:intergenic 55.0%
TTCAAAGGCTTCGGCACGTC+AGG + Chr1:58960850-58960869 MsG0180003242.01.T01:CDS 55.0%
TTTCAGAGACGTGGTCGTGC+TGG + Chr1:58960993-58961012 MsG0180003242.01.T01:intron 55.0%
! GCAGAAGGGTTTGATGGGTG+TGG - Chr1:58958250-58958269 None:intergenic 55.0%
! TGCCGTAGCCGTTGATTGTG+AGG - Chr1:58954249-58954268 None:intergenic 55.0%
!! AGAGATGGTGGGACCCTGTT+TGG + Chr1:58952800-58952819 MsG0180003242.01.T01:CDS 55.0%
!! AGCAGTAAGGGTGTTGCCAG+CGG + Chr1:58958563-58958582 MsG0180003242.01.T01:intron 55.0%
!! GAGGGCATTGAGATGCTTGG+GGG + Chr1:58962370-58962389 MsG0180003242.01.T01:CDS 55.0%
!! GGTGAGGGCATTGAGATGCT+TGG + Chr1:58962367-58962386 MsG0180003242.01.T01:CDS 55.0%
!! TCTGATGAGGTGTGGTGGGT+TGG + Chr1:58957067-58957086 MsG0180003242.01.T01:intron 55.0%
AAAGAGTAGTCCCGGCCCTG+CGG + Chr1:58953457-58953476 MsG0180003242.01.T01:intron 60.0%
ACCGCAAGGTCACTGGGGAT+AGG - Chr1:58961731-58961750 None:intergenic 60.0%
AGAGACGCGGCGAAATCGCA+GGG - Chr1:58958272-58958291 None:intergenic 60.0%
AGGCGTAAATCTGGACGCCG+AGG - Chr1:58955966-58955985 None:intergenic 60.0%
ATGGAAGGCTAGGTGGTGCG+TGG + Chr1:58958590-58958609 MsG0180003242.01.T01:intron 60.0%
CAGCGGTGAGATGGAAGGCT+AGG + Chr1:58958580-58958599 MsG0180003242.01.T01:intron 60.0%
CCCATGCGGGTCTCACACTT+TGG + Chr1:58956840-58956859 MsG0180003242.01.T01:intron 60.0%
CGCAGGGCAGAAGGGTTTGA+TGG - Chr1:58958256-58958275 None:intergenic 60.0%
CGGTGAGATGGAAGGCTAGG+TGG + Chr1:58958583-58958602 MsG0180003242.01.T01:intron 60.0%
GAGGTGGCGAACAGAGATGG+TGG + Chr1:58952788-58952807 MsG0180003242.01.T01:CDS 60.0%
GGAAAGGCAGGAACTGGAGC+AGG + Chr1:58954388-58954407 MsG0180003242.01.T01:CDS 60.0%
GGAGGAACGGCGAGCAGTAA+GGG + Chr1:58958551-58958570 MsG0180003242.01.T01:intron 60.0%
GGCGAAATCGCAGGGCAGAA+GGG - Chr1:58958264-58958283 None:intergenic 60.0%
GTCCAGTTGGGGTCTGTCTG+AGG + Chr1:58953553-58953572 MsG0180003242.01.T01:intron 60.0%
GTTGCCAGCGGTGAGATGGA+AGG + Chr1:58958575-58958594 MsG0180003242.01.T01:intron 60.0%
GTTTCGGGAGAGACAGGCTG+TGG + Chr1:58954902-58954921 MsG0180003242.01.T01:CDS 60.0%
TCATCTTCCAATCGCGGCGG+AGG + Chr1:58952709-58952728 MsG0180003242.01.T01:CDS 60.0%
TCCGCCGCGATTGGAAGATG+AGG - Chr1:58952710-58952729 None:intergenic 60.0%
TGCAAGACGGTGCAGAGACG+CGG - Chr1:58958285-58958304 None:intergenic 60.0%
! CGTGCTGGTCGAGTACAACC+TGG + Chr1:58961008-58961027 MsG0180003242.01.T01:CDS 60.0%
! CTAGCCTTCCATCTCACCGC+TGG - Chr1:58958582-58958601 None:intergenic 60.0%
! CTCCGCCTTGGTAGTTAGGG+CGG - Chr1:58952672-58952691 None:intergenic 60.0%
! GCCTTGGTAGTTAGGGCGGT+AGG - Chr1:58952668-58952687 None:intergenic 60.0%
! GGCCTCCGCCTTGGTAGTTA+GGG - Chr1:58952675-58952694 None:intergenic 60.0%
ACGGGTCGTCCTCCACTGGA+GGG + Chr1:58958725-58958744 MsG0180003242.01.T01:intron 65.0%
AGGCGCTCAGCACGCCAAAC+AGG - Chr1:58952817-58952836 None:intergenic 65.0%
CAAGGTCCGGGTTCGAACCC+CGG + Chr1:58958907-58958926 MsG0180003242.01.T01:intron 65.0%
CAGAGACGCGGCGAAATCGC+AGG - Chr1:58958273-58958292 None:intergenic 65.0%
CGCCCTAACTACCAAGGCGG+AGG + Chr1:58952670-58952689 MsG0180003242.01.T01:CDS 65.0%
CGGCGAAATCGCAGGGCAGA+AGG - Chr1:58958265-58958284 None:intergenic 65.0%
GAAGGCTAGGTGGTGCGTGG+TGG + Chr1:58958593-58958612 MsG0180003242.01.T01:intron 65.0%
GCCGAGGTGGCGAACAGAGA+TGG + Chr1:58952785-58952804 MsG0180003242.01.T01:CDS 65.0%
GGCGCTCAGCACGCCAAACA+GGG - Chr1:58952816-58952835 None:intergenic 65.0%
GGGAGGAACGGCGAGCAGTA+AGG + Chr1:58958550-58958569 MsG0180003242.01.T01:intron 65.0%
! CGGCCTCCGCCTTGGTAGTT+AGG - Chr1:58952676-58952695 None:intergenic 65.0%
! GGGTGTTGCCAGCGGTGAGA+TGG + Chr1:58958571-58958590 MsG0180003242.01.T01:intron 65.0%
CACGGGTCGTCCTCCACTGG+AGG + Chr1:58958724-58958743 MsG0180003242.01.T01:intron 70.0%
CTCCAGTGGAGGACGACCCG+TGG - Chr1:58958726-58958745 None:intergenic 70.0%
GGCTAGGTGGTGCGTGGTGG+CGG + Chr1:58958596-58958615 MsG0180003242.01.T01:intron 70.0%
TACCAAGGCGGAGGCCGCAG+AGG + Chr1:58952679-58952698 MsG0180003242.01.T01:CDS 70.0%
TGCCACGGGTCGTCCTCCAC+TGG + Chr1:58958721-58958740 MsG0180003242.01.T01:intron 70.0%
TGGTGGCCGGGGTTCGAACC+CGG - Chr1:58958916-58958935 None:intergenic 70.0%
!! GCGTGGTGGCGGAGCAGTGA+GGG + Chr1:58958607-58958626 MsG0180003242.01.T01:intron 70.0%
!! TGCGTGGTGGCGGAGCAGTG+AGG + Chr1:58958606-58958625 MsG0180003242.01.T01:intron 70.0%
CACCTCGGCCACCGCCACCT+CGG - Chr1:58952774-58952793 None:intergenic 75.0%
TGCCTCTGCGGCCTCCGCCT+TGG - Chr1:58952684-58952703 None:intergenic 75.0%
! AATCGCGGCGGAGGCCGCCG+TGG + Chr1:58952718-58952737 MsG0180003242.01.T01:CDS 80.0%
! ACGGCGGCCTCCGCCGCGAT+TGG - Chr1:58952719-58952738 None:intergenic 80.0%
! GGCGGCGGTGGACGTGGTGG+CGG + Chr1:58952745-58952764 MsG0180003242.01.T01:CDS 80.0%
! GTCCACCGCCGCCACCGCCA+CGG - Chr1:58952738-58952757 None:intergenic 80.0%
!! CGAGGTGGCGGTGGCCGAGG+TGG + Chr1:58952772-58952791 MsG0180003242.01.T01:CDS 80.0%
!! GGTGGCGGCGGTGGACGTGG+TGG + Chr1:58952742-58952761 MsG0180003242.01.T01:CDS 80.0%
!! GGTGGCGGTGGCCGAGGTGG+CGG + Chr1:58952760-58952779 MsG0180003242.01.T01:CDS 80.0%
!!! CGTGGTGGCGGTGGCCGAGG+TGG + Chr1:58952757-58952776 MsG0180003242.01.T01:CDS 80.0%
!!! GGACGTGGTGGCGGTGGCCG+AGG + Chr1:58952754-58952773 MsG0180003242.01.T01:CDS 80.0%
!!! GGCGGTGGACGTGGTGGCGG+TGG + Chr1:58952748-58952767 MsG0180003242.01.T01:CDS 80.0%
! CACCGCCGCCACCGCCACGG+CGG - Chr1:58952735-58952754 None:intergenic 85.0%
! GGAGGCCGCCGTGGCGGTGG+CGG + Chr1:58952727-58952746 MsG0180003242.01.T01:CDS 85.0%
!! GGCCGAGGTGGCGGTGGCCG+AGG + Chr1:58952769-58952788 MsG0180003242.01.T01:CDS 85.0%
!! GGCGGTGGCCGAGGTGGCGG+TGG + Chr1:58952763-58952782 MsG0180003242.01.T01:CDS 85.0%
!! GGCGGTGGCGGCGGTGGACG+TGG + Chr1:58952739-58952758 MsG0180003242.01.T01:CDS 85.0%
! CGCGGCGGAGGCCGCCGTGG+CGG + Chr1:58952721-58952740 MsG0180003242.01.T01:CDS 90.0%
! GGCGGAGGCCGCCGTGGCGG+TGG + Chr1:58952724-58952743 MsG0180003242.01.T01:CDS 90.0%
!! CGCCGTGGCGGTGGCGGCGG+TGG + Chr1:58952733-58952752 MsG0180003242.01.T01:CDS 90.0%
!! GGCCGCCGTGGCGGTGGCGG+CGG + Chr1:58952730-58952749 MsG0180003242.01.T01:CDS 90.0%
Chromosome Type Strat End Strand Name
Chr1 gene 58952550 58963168 58952550 ID=MsG0180003242.01;Name=MsG0180003242.01
Chr1 mRNA 58952550 58963168 58952550 ID=MsG0180003242.01.T01;Parent=MsG0180003242.01;Name=MsG0180003242.01.T01;_AED=0.36;_eAED=0.37;_QI=0|0.76|0.64|1|0.84|0.78|14|498|996
Chr1 exon 58952550 58952870 58952550 ID=MsG0180003242.01.T01:exon:49070;Parent=MsG0180003242.01.T01
Chr1 exon 58953118 58953269 58953118 ID=MsG0180003242.01.T01:exon:49071;Parent=MsG0180003242.01.T01
Chr1 exon 58954036 58954099 58954036 ID=MsG0180003242.01.T01:exon:49072;Parent=MsG0180003242.01.T01
Chr1 exon 58954185 58954409 58954185 ID=MsG0180003242.01.T01:exon:49073;Parent=MsG0180003242.01.T01
Chr1 exon 58954534 58954629 58954534 ID=MsG0180003242.01.T01:exon:49074;Parent=MsG0180003242.01.T01
Chr1 exon 58954893 58955168 58954893 ID=MsG0180003242.01.T01:exon:49075;Parent=MsG0180003242.01.T01
Chr1 exon 58955858 58956061 58955858 ID=MsG0180003242.01.T01:exon:49076;Parent=MsG0180003242.01.T01
Chr1 exon 58956168 58956472 58956168 ID=MsG0180003242.01.T01:exon:49077;Parent=MsG0180003242.01.T01
Chr1 exon 58960676 58960871 58960676 ID=MsG0180003242.01.T01:exon:49078;Parent=MsG0180003242.01.T01
Chr1 exon 58960999 58961272 58960999 ID=MsG0180003242.01.T01:exon:49079;Parent=MsG0180003242.01.T01
Chr1 exon 58961358 58961550 58961358 ID=MsG0180003242.01.T01:exon:49080;Parent=MsG0180003242.01.T01
Chr1 exon 58961641 58961827 58961641 ID=MsG0180003242.01.T01:exon:49081;Parent=MsG0180003242.01.T01
Chr1 exon 58962070 58962438 58962070 ID=MsG0180003242.01.T01:exon:49082;Parent=MsG0180003242.01.T01
Chr1 exon 58962542 58963168 58962542 ID=MsG0180003242.01.T01:exon:49083;Parent=MsG0180003242.01.T01
Chr1 CDS 58952550 58952870 58952550 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58953118 58953269 58953118 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58954036 58954099 58954036 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58954185 58954409 58954185 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58954534 58954629 58954534 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58954893 58955168 58954893 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58955858 58956061 58955858 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58956168 58956472 58956168 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58960676 58960871 58960676 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58960999 58961272 58960999 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58961358 58961550 58961358 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58961641 58961827 58961641 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58962070 58962438 58962070 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 CDS 58962542 58962670 58962542 ID=MsG0180003242.01.T01:cds;Parent=MsG0180003242.01.T01
Chr1 three_prime_UTR 58962671 58963168 58962671 ID=MsG0180003242.01.T01:three_prime_utr;Parent=MsG0180003242.01.T01
Gene Sequence

>MsG0180003242.01.T01

ATGCTTCACTCCTTTCTCCGACCTAACTTTCACTCTCATCACTTCTTCTCTATACACCCCCACGCACACAAACTTCTTCTCTCCAACCTTCCAATCTCCACTTCTCTCATAATGTCCTACCGCCCTAACTACCAAGGCGGAGGCCGCAGAGGCAACTCCTCATCTTCCAATCGCGGCGGAGGCCGCCGTGGCGGTGGCGGCGGTGGACGTGGTGGCGGTGGCCGAGGTGGCGGTGGCCGAGGTGGCGAACAGAGATGGTGGGACCCTGTTTGGCGTGCTGAGCGCCTTAGACAACAACAAGCAGAGGTACATTCAATTAATTTACAGAAGGAGGTGCTTGATGAGAAAGAATGGTGGAGAAAGATAGAAACAATGAAAAGAGGAGGGGAACAGGAGTTGGTTATAAAGCACTACTTCAGTATTGCAGACCAGCAAACCCTAGCTGATATGGCTTATCAACTTGAACTTTACTTCAAAGTTCCTTTGCCTGATTACCGTGCAGACCTTGATGAGCGTCATGGATCAACACAGAAGGAGATTAAAATGTCCACAGACATAGAGAGAAGAGTAGGAAATCTTTTAAATAACTCACAGTCAACCTCACAATCAACGGCTACGGCAGCTGCTAGTATGCCTTCTGCATCAACTGATATGGGACATAAAAAAACAATGACCACTATAAACTCTGCTTGTTCACAACAGACTGATACTTCAAAAGAGAAACTCAGTGTTGCACTCAAGGAAAGGCAGGAACTGGAGCAGGCAAGTGGTAGTTTGAAGGAAATGAAATCATTTAGGGAGAAGCTTCCTGCATTTAAAATGAAGTCTGAGTTTCTGAAAGCAGTTCAAGGAAATCAGGTATTGGTAGTTTCGGGAGAGACAGGCTGTGGCAAAACAACACAGCTGCCACAGTTCATTCTGGAAGAAGAAATATCTTGTTTGCGTGGAGCTGACTGCAACATAATCTGTACTCAGCCTCGTCGTGTGTCTGCAATCTCTGTTGCAGCTCGTATTTCTGCTGAAAGGGGAGAAACTCTTGGCAAAACTGTTGGATACCACATCCGTCTTGAAGCAAAACGTTCTGCGGAAACACGCCTTCTTTTTTGCACCACTGGTGTATTACTGCGGCAACTGGTACAAGATCCAGAGTTGACTGGTGTTAGTCATTTGCTGGTGGATGAAATTCATGAAAGAGGCATGAATGAAGACTTCTTAATAATAATTTTACGCGACCTTCTTCCTCGGCGTCCAGATTTACGCCTCATTCTAATGAGTGCCACAATCAATGCTGATTTGTTCTCGAAATACTTCGCAAATGCCCCAACAATGCACATACCGGGATTTACTTTCCCTGTGGTGGAGCATTTCCTAGAAGATGTGTTGGAGAAAACTAGATATAGCATCAAGTCGGAGTCTGACGATATTGAGGGGAATTCAAGGAGAAAAAAGAAACAACAAGATTCTAAGAAGGATCCTTTGGCTGAAATGTTTGAGGCATGTATACTTTATATATCAATCAATCCATGTATATACAATATTCGTGATTTAGAAGATACCTTGAATTATGAGCTCTTTTATCTTCACCATACTAGTTGCATGGAATTAGGACTTAAATTGACGATTCCACTGATTTTGTTTCTTGGCATTTTTTTTTTATCGCTGTTGTTTTGTCATTGCAGAAAAATTGTGCTAGCAACAAATATTGCTGAGAGTAGCATCACCATAGATGATGTTGTGTATGTCATAGACTGTGGCAAAGCAAAGGAAACCAGCTATGATGCTCTTAATAAGCTTGCCAGCTTGTTGCCATCATGGATTTCAAAGGCTTCGGCACGTCAGAGACGTGGTCGTGCTGGTCGAGTACAACCTGGAGTTTGTTATAGATTGTATCCAAAACTGATACACGATGCTATGCCAGAGTATCAGTTACCTGAAATCCTCCGAACACCTTTGCAAGAGTTGTGCCTGCACATTAAAAGCTTGCAGCTGGGAACTGTGGCACCATTTTTAGGGAAAGCACTTCAGCCGCCAGATTCTCTTGCTGTTCAGAATGCTATAGAACTTCTGAAGACAATTGGGGCATTAGATAATAATGAGGAGCTTACTCCACTGGGTCGGCATCTTTGTACTGTACCTTTGGACCCAAATATAGGGAAGATGCTTCTCATGGGTTCTATCTTTCAGTGTCTCAGTCCTGCCTTAACTATTGCTGCTTCTCTTGCTTACCGCAACCCATTTGTCCTACCTATAAACAGAAAAAAAGAAGCTGATGAAGCAAAAAAATCTTTTTCTGCTGACTCTTGCAGTGATCATTTAGCCCTTCTTGAAGCTTTTGAACAATGGAAGGACGCAAAAAGTAGGGGGGATGAAAAGAATTTTTGTTGGGAAAATTTCCTATCCCCAGTGACCTTGCGGTTGATTGATGATATGAGAACACAATTTCTCGATTTGTTATCTGATATTGGGTTTGTTGACAAGTCAAAGGGTGTCCAAGCTTACAACCAATACAGTCATGATTTGGAGATGGTTTGTGCAATTCTTTGTGCTGGTCTCTACCCTAATGTTGTGCAGTGCAAAAGAAGGGGACACCGAACAGCATTCTACACTAAAGAAGCCGGGAAGGTTGACATTCATCCCTCTTCTGTTAATGCCGGAGTTCATTCCTTCCCTCTGCCCTACTTAGTATATAGTGAAAAAGTGAAAACAACCAGCATCTATATTAGAGACTCTACCAACATTTCAGATTATGCCCTACTTCTATTTGGTGGTAATCTTGACCCTAGCAAAAATGGTGAGGGCATTGAGATGCTTGGGGGTTACCTTCATTTCTCTGCTTCCAAGAGTGTCATTGAGTTGATTAAGAAATTGCGTGGGGAACTTGACAAGCTTCTAAACAGAAAAATTGAAGAGCCAGGTTTTGACATTTCTGATGAAGGAAAAGCAGTGGTTGCTGCTGCTATTGAATTGCTTCATAATCAAGTCATGCAATGA
Protein sequence

>MsG0180003242.01.T01

MLHSFLRPNFHSHHFFSIHPHAHKLLLSNLPISTSLIMSYRPNYQGGGRRGNSSSSNRGGGRRGGGGGGRGGGGRGGGGRGGEQRWWDPVWRAERLRQQQAEVHSINLQKEVLDEKEWWRKIETMKRGGEQELVIKHYFSIADQQTLADMAYQLELYFKVPLPDYRADLDERHGSTQKEIKMSTDIERRVGNLLNNSQSTSQSTATAAASMPSASTDMGHKKTMTTINSACSQQTDTSKEKLSVALKERQELEQASGSLKEMKSFREKLPAFKMKSEFLKAVQGNQVLVVSGETGCGKTTQLPQFILEEEISCLRGADCNIICTQPRRVSAISVAARISAERGETLGKTVGYHIRLEAKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATINADLFSKYFANAPTMHIPGFTFPVVEHFLEDVLEKTRYSIKSESDDIEGNSRRKKKQQDSKKDPLAEMFEACILYISINPCIYNIRDLEDTLNYELFYLHHTSCMELGLKLTIPLILFLGIFFLSLLFCHCRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLASLLPSWISKASARQRRGRAGRVQPGVCYRLYPKLIHDAMPEYQLPEILRTPLQELCLHIKSLQLGTVAPFLGKALQPPDSLAVQNAIELLKTIGALDNNEELTPLGRHLCTVPLDPNIGKMLLMGSIFQCLSPALTIAASLAYRNPFVLPINRKKEADEAKKSFSADSCSDHLALLEAFEQWKDAKSRGDEKNFCWENFLSPVTLRLIDDMRTQFLDLLSDIGFVDKSKGVQAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGHRTAFYTKEAGKVDIHPSSVNAGVHSFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLDPSKNGEGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIEEPGFDISDEGKAVVAAAIELLHNQVMQ*