Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009509.01.T01 | RHN74416.1 | 66.854 | 534 | 48 | 7 | 9 | 414 | 47 | 579 | 0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009509.01.T01 | A0A396J822 | 66.854 | 534 | 48 | 7 | 9 | 414 | 47 | 579 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048058.01 | MsG0280009509.01 | 0.801620 | 8.261132e-49 | 3.963289e-46 |
| MsG0180000197.01 | MsG0280009509.01 | 0.842022 | 3.331985e-58 | 4.986100e-55 |
| MsG0180000300.01 | MsG0280009509.01 | 0.804211 | 2.409208e-49 | 1.234917e-46 |
| MsG0180000360.01 | MsG0280009509.01 | 0.815401 | 9.422323e-52 | 6.489601e-49 |
| MsG0180001294.01 | MsG0280009509.01 | 0.804331 | 2.274196e-49 | 1.169339e-46 |
| MsG0180001565.01 | MsG0280009509.01 | 0.805818 | 1.110819e-49 | 5.934727e-47 |
| MsG0180002074.01 | MsG0280009509.01 | 0.856698 | 2.698317e-62 | 6.494911e-59 |
| MsG0180003242.01 | MsG0280009509.01 | 0.824997 | 5.960620e-54 | 5.365509e-51 |
| MsG0180004147.01 | MsG0280009509.01 | 0.815557 | 8.695477e-52 | 6.014752e-49 |
| MsG0180004222.01 | MsG0280009509.01 | 0.823862 | 1.102156e-53 | 9.604923e-51 |
| MsG0180004495.01 | MsG0280009509.01 | 0.805196 | 1.500486e-49 | 7.889069e-47 |
| MsG0180004989.01 | MsG0280009509.01 | 0.842441 | 2.581397e-58 | 3.914804e-55 |
| MsG0180005026.01 | MsG0280009509.01 | 0.806911 | 6.536461e-50 | 3.591143e-47 |
| MsG0180005188.01 | MsG0280009509.01 | 0.861917 | 7.324803e-64 | 2.106021e-60 |
| MsG0180005332.01 | MsG0280009509.01 | 0.801234 | 9.914047e-49 | 4.710382e-46 |
| MsG0180005451.01 | MsG0280009509.01 | 0.802142 | 6.454706e-49 | 3.138055e-46 |
| MsG0180005493.01 | MsG0280009509.01 | 0.800941 | 1.137952e-48 | 5.366853e-46 |
| MsG0180005846.01 | MsG0280009509.01 | 0.813571 | 2.392339e-51 | 1.567971e-48 |
| MsG0180006235.01 | MsG0280009509.01 | 0.815110 | 1.093489e-51 | 7.471196e-49 |
| MsG0180006260.01 | MsG0280009509.01 | 0.843309 | 1.516948e-58 | 2.364024e-55 |
| MsG0280006864.01 | MsG0280009509.01 | 0.802816 | 4.688892e-49 | 2.319185e-46 |
| MsG0280007048.01 | MsG0280009509.01 | 0.802199 | 6.282794e-49 | 3.058802e-46 |
| MsG0280007706.01 | MsG0280009509.01 | 0.802780 | 4.769592e-49 | 2.356920e-46 |
| MsG0280007761.01 | MsG0280009509.01 | 0.800427 | 1.448429e-48 | 6.742664e-46 |
| MsG0280007790.01 | MsG0280009509.01 | 0.843053 | 1.774973e-58 | 2.743180e-55 |
| MsG0280007983.01 | MsG0280009509.01 | 0.801562 | 8.490231e-49 | 4.067303e-46 |
| MsG0280008271.01 | MsG0280009509.01 | 0.822721 | 2.035863e-53 | 1.717839e-50 |
| MsG0280009241.01 | MsG0280009509.01 | 0.818540 | 1.858104e-52 | 1.394827e-49 |
| MsG0280009386.01 | MsG0280009509.01 | 0.820304 | 7.362365e-53 | 5.803792e-50 |
| MsG0280009509.01 | MsG0280009514.01 | 0.800064 | 1.717468e-48 | 7.921414e-46 |
| MsG0280009509.01 | MsG0280010001.01 | 0.841834 | 3.735708e-58 | 5.557327e-55 |
| MsG0280009509.01 | MsG0280010263.01 | 0.824539 | 7.642335e-54 | 6.789129e-51 |
| MsG0280009509.01 | MsG0280010427.01 | 0.800352 | 1.500756e-48 | 6.972783e-46 |
| MsG0280009509.01 | MsG0280010735.01 | 0.838639 | 2.551674e-57 | 3.439023e-54 |
| MsG0280009509.01 | MsG0280010868.01 | 0.820619 | 6.231936e-53 | 4.955437e-50 |
| MsG0280009509.01 | MsG0280011105.01 | 0.842084 | 3.209381e-58 | 4.812260e-55 |
| MsG0280009509.01 | MsG0380011674.01 | 0.804935 | 1.701124e-49 | 8.884824e-47 |
| MsG0280009509.01 | MsG0380013548.01 | 0.800506 | 1.395655e-48 | 6.509724e-46 |
| MsG0280009509.01 | MsG0380015548.01 | 0.811574 | 6.540604e-51 | 4.063227e-48 |
| MsG0280009509.01 | MsG0380016227.01 | 0.807648 | 4.562541e-50 | 2.555052e-47 |
| MsG0280009509.01 | MsG0380016510.01 | 0.833812 | 4.301976e-56 | 5.010384e-53 |
| MsG0280009509.01 | MsG0380017116.01 | 0.860760 | 1.650093e-63 | 4.560984e-60 |
| MsG0280009509.01 | MsG0380017240.01 | 0.827259 | 1.726631e-54 | 1.658363e-51 |
| MsG0280009509.01 | MsG0380017410.01 | 0.818658 | 1.747630e-52 | 1.316046e-49 |
| MsG0280009509.01 | MsG0380017643.01 | 0.842946 | 1.894627e-58 | 2.918343e-55 |
| MsG0280009509.01 | MsG0380017836.01 | 0.817386 | 3.388188e-52 | 2.464018e-49 |
| MsG0280009509.01 | MsG0480018230.01 | 0.833073 | 6.575511e-56 | 7.491057e-53 |
| MsG0280009509.01 | MsG0480018256.01 | 0.856027 | 4.244940e-62 | 9.994552e-59 |
| MsG0280009509.01 | MsG0480018845.01 | 0.823621 | 1.254872e-53 | 1.086137e-50 |
| MsG0280009509.01 | MsG0480018846.01 | 0.852151 | 5.572970e-61 | 1.153911e-57 |
| MsG0280009509.01 | MsG0480019034.01 | 0.830862 | 2.312306e-55 | 2.466782e-52 |
| MsG0280009509.01 | MsG0480019170.01 | 0.832533 | 8.952711e-56 | 1.003504e-52 |
| MsG0280009509.01 | MsG0480020242.01 | 0.850776 | 1.364525e-60 | 2.702548e-57 |
| MsG0280009509.01 | MsG0480020917.01 | 0.821469 | 3.971766e-53 | 3.233927e-50 |
| MsG0280009509.01 | MsG0480021156.01 | 0.815965 | 7.054029e-52 | 4.934153e-49 |
| MsG0280009509.01 | MsG0480021225.01 | 0.827552 | 1.469186e-54 | 1.422991e-51 |
| MsG0280009509.01 | MsG0480022228.01 | 0.826751 | 2.284213e-54 | 2.161361e-51 |
| MsG0280009509.01 | MsG0480022598.01 | 0.809324 | 2.001872e-50 | 1.171815e-47 |
| MsG0280009509.01 | MsG0480022719.01 | 0.815617 | 8.432207e-52 | 5.842882e-49 |
| MsG0280009509.01 | MsG0480023421.01 | 0.841982 | 3.413827e-58 | 5.102394e-55 |
| MsG0280009509.01 | MsG0480023500.01 | 0.812524 | 4.060818e-51 | 2.587886e-48 |
| MsG0280009509.01 | MsG0480023620.01 | 0.858226 | 9.525588e-63 | 2.413751e-59 |
| MsG0280009509.01 | MsG0580024157.01 | 0.820474 | 6.730077e-53 | 5.330458e-50 |
| MsG0280009509.01 | MsG0580024566.01 | 0.801076 | 1.067710e-48 | 5.052916e-46 |
| MsG0280009509.01 | MsG0580024721.01 | 0.806527 | 7.879167e-50 | 4.286236e-47 |
| MsG0280009509.01 | MsG0580024798.01 | 0.800216 | 1.599553e-48 | 7.406053e-46 |
| MsG0280009509.01 | MsG0580025045.01 | 0.806088 | 9.749170e-50 | 5.244551e-47 |
| MsG0280009509.01 | MsG0580025072.01 | 0.846492 | 2.099947e-59 | 3.620964e-56 |
| MsG0280009509.01 | MsG0580025191.01 | 0.825948 | 3.547327e-54 | 3.280892e-51 |
| MsG0280009509.01 | MsG0580025352.01 | 0.822303 | 2.545721e-53 | 2.122667e-50 |
| MsG0280009509.01 | MsG0580027408.01 | 0.826047 | 3.361323e-54 | 3.117421e-51 |
| MsG0280009509.01 | MsG0580029133.01 | 0.828802 | 7.341285e-55 | 7.374364e-52 |
| MsG0280009509.01 | MsG0580029148.01 | 0.803644 | 3.159427e-49 | 1.596092e-46 |
| MsG0280009509.01 | MsG0580029149.01 | 0.806771 | 6.996559e-50 | 3.830040e-47 |
| MsG0280009509.01 | MsG0680030621.01 | 0.872577 | 2.856953e-67 | 1.201677e-63 |
| MsG0280009509.01 | MsG0680030740.01 | 0.842312 | 2.792145e-58 | 4.216956e-55 |
| MsG0280009509.01 | MsG0680031719.01 | 0.803194 | 3.915898e-49 | 1.955576e-46 |
| MsG0280009509.01 | MsG0780036235.01 | 0.823519 | 1.325768e-53 | 1.144164e-50 |
| MsG0280009509.01 | MsG0780037232.01 | 0.827854 | 1.243152e-54 | 1.214807e-51 |
| MsG0280009509.01 | MsG0780039654.01 | 0.821457 | 3.996013e-53 | 3.252642e-50 |
| MsG0280009509.01 | MsG0780039712.01 | 0.834756 | 2.493079e-56 | 2.986538e-53 |
| MsG0280009509.01 | MsG0780039817.01 | 0.868529 | 6.103883e-66 | 2.215394e-62 |
| MsG0280009509.01 | MsG0780040488.01 | 0.815383 | 9.507795e-52 | 6.545340e-49 |
| MsG0280009509.01 | MsG0780040516.01 | 0.818109 | 2.327246e-52 | 1.726237e-49 |
| MsG0280009509.01 | MsG0780040541.01 | 0.846453 | 2.152098e-59 | 3.706415e-56 |
| MsG0280009509.01 | MsG0780040564.01 | 0.855598 | 5.664698e-62 | 1.314780e-58 |
| MsG0280009509.01 | MsG0780040586.01 | 0.846506 | 2.081500e-59 | 3.590879e-56 |
| MsG0280009509.01 | MsG0780041310.01 | 0.823970 | 1.039572e-53 | 9.086805e-51 |
| MsG0280009509.01 | MsG0780041548.01 | 0.804030 | 2.626310e-49 | 1.340045e-46 |
| MsG0280009509.01 | MsG0880042836.01 | 0.823860 | 1.103306e-53 | 9.614452e-51 |
| MsG0280009509.01 | MsG0880042845.01 | 0.802973 | 4.350562e-49 | 2.160254e-46 |
| MsG0280009509.01 | MsG0880043547.01 | 0.809789 | 1.590195e-50 | 9.424373e-48 |
| MsG0280009509.01 | MsG0880044792.01 | 0.806782 | 6.960341e-50 | 3.811266e-47 |
| MsG0280009509.01 | MsG0880044803.01 | 0.839212 | 1.814143e-57 | 2.487990e-54 |
| MsG0280009509.01 | MsG0880045022.01 | 0.811799 | 5.844110e-51 | 3.652102e-48 |
| MsG0280009509.01 | MsG0880045185.01 | 0.837727 | 4.383106e-57 | 5.744994e-54 |
| MsG0280009509.01 | MsG0880045914.01 | 0.819584 | 1.075599e-52 | 8.311205e-50 |
| MsG0280009509.01 | MsG0880046165.01 | 0.820214 | 7.718231e-53 | 6.069284e-50 |
| MsG0280009509.01 | MsG0880046475.01 | 0.814410 | 1.563043e-51 | 1.048050e-48 |
| MsG0280009509.01 | MsG0880046762.01 | 0.811256 | 7.667918e-51 | 4.723716e-48 |
| MsG0280009509.01 | MsG0880046983.01 | 0.830712 | 2.516036e-55 | 2.672388e-52 |
| MsG0280009509.01 | MsG0880047226.01 | 0.822250 | 2.619132e-53 | 2.180455e-50 |
| MsG0280009509.01 | MsG0880047289.01 | 0.818184 | 2.237427e-52 | 1.663122e-49 |
| MsG0280009509.01 | MsG0880047293.01 | 0.841448 | 4.723807e-58 | 6.943811e-55 |
| MsG0280009509.01 | MsG0880047337.01 | 0.862094 | 6.461745e-64 | 1.869522e-60 |
| MsG0280009509.01 | MsG0880047353.01 | 0.816024 | 6.842625e-52 | 4.794143e-49 |
| MsG0280009509.01 | MsG0880047478.01 | 0.805276 | 1.443404e-49 | 7.604419e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009509.01.T01 | MTR_2g067640 | 67.159 | 542 | 49 | 7 | 1 | 414 | 1 | 541 | 0.0 | 642 |
| MsG0280009509.01.T01 | MTR_2g062430 | 46.818 | 440 | 148 | 8 | 52 | 414 | 123 | 553 | 1.31e-127 | 379 |
| MsG0280009509.01.T01 | MTR_2g062410 | 47.454 | 432 | 138 | 8 | 64 | 414 | 163 | 586 | 8.35e-126 | 376 |
| MsG0280009509.01.T01 | MTR_2g062370 | 44.266 | 436 | 150 | 8 | 64 | 414 | 163 | 590 | 2.18e-118 | 357 |
| MsG0280009509.01.T01 | MTR_2g062380 | 43.052 | 439 | 151 | 11 | 64 | 414 | 133 | 560 | 4.46e-109 | 332 |
| MsG0280009509.01.T01 | MTR_2g062340 | 38.838 | 551 | 163 | 13 | 1 | 413 | 2 | 516 | 1.60e-108 | 329 |
| MsG0280009509.01.T01 | MTR_4g131710 | 42.630 | 441 | 152 | 11 | 64 | 414 | 157 | 586 | 1.58e-106 | 326 |
| MsG0280009509.01.T01 | MTR_4g077620 | 39.952 | 418 | 170 | 5 | 75 | 413 | 152 | 567 | 8.27e-101 | 311 |
| MsG0280009509.01.T01 | MTR_5g007860 | 39.686 | 446 | 184 | 6 | 52 | 413 | 161 | 605 | 2.67e-99 | 308 |
| MsG0280009509.01.T01 | MTR_1g080370 | 38.771 | 423 | 176 | 7 | 71 | 413 | 139 | 558 | 1.08e-93 | 292 |
| MsG0280009509.01.T01 | MTR_1g080410 | 38.771 | 423 | 176 | 7 | 71 | 413 | 139 | 558 | 1.08e-93 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009509.01.T01 | AT2G44230 | 41.636 | 550 | 177 | 13 | 1 | 414 | 1 | 542 | 2.66e-127 | 378 |
| MsG0280009509.01.T01 | AT2G44260 | 40.072 | 559 | 182 | 11 | 1 | 413 | 1 | 552 | 1.38e-125 | 374 |
| MsG0280009509.01.T01 | AT2G44260 | 38.031 | 589 | 182 | 12 | 1 | 413 | 1 | 582 | 3.90e-119 | 358 |
| MsG0280009509.01.T01 | AT3G01870 | 40.397 | 453 | 177 | 9 | 42 | 413 | 143 | 583 | 4.41e-101 | 312 |
| MsG0280009509.01.T01 | AT5G43950 | 38.048 | 502 | 217 | 10 | 5 | 413 | 64 | 564 | 1.01e-100 | 311 |
| MsG0280009509.01.T01 | AT3G01880 | 40.222 | 450 | 174 | 11 | 47 | 413 | 152 | 589 | 2.11e-97 | 303 |
| MsG0280009509.01.T01 | AT5G18490 | 38.588 | 425 | 173 | 8 | 71 | 414 | 135 | 552 | 1.16e-90 | 285 |
| MsG0280009509.01.T01 | AT1G04090 | 38.532 | 436 | 182 | 9 | 63 | 413 | 136 | 570 | 9.06e-89 | 280 |
| MsG0280009509.01.T01 | AT3G04350 | 36.219 | 439 | 190 | 8 | 62 | 414 | 110 | 544 | 5.43e-88 | 277 |
| MsG0280009509.01.T01 | AT3G04350 | 36.219 | 439 | 190 | 8 | 62 | 414 | 132 | 566 | 1.04e-87 | 277 |
Find 97 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAAAATTACTTATAATTT+AGG | 0.099121 | 2:-53367633 | MsG0280009509.01.T01:CDS |
| AATTGTTTCTGGGGAGTATT+TGG | 0.142107 | 2:-53367706 | MsG0280009509.01.T01:CDS |
| AGTGATTTGGGTATTGATTT+TGG | 0.158866 | 2:-53367741 | MsG0280009509.01.T01:CDS |
| CCTAATGGTTATAGCCCTTT+AGG | 0.202069 | 2:-53368689 | MsG0280009509.01.T01:CDS |
| TGAGATTAATTCATGGATTT+GGG | 0.203465 | 2:-53368588 | MsG0280009509.01.T01:CDS |
| GTGAGATTAATTCATGGATT+TGG | 0.207795 | 2:-53368589 | MsG0280009509.01.T01:CDS |
| GTGGCTTATTCTTCATTAAA+TGG | 0.252619 | 2:-53367840 | MsG0280009509.01.T01:CDS |
| TGAAGAACCAATCCAGCTTT+TGG | 0.276809 | 2:+53367804 | None:intergenic |
| GTCACCTTGTCCACCTTCTA+AGG | 0.306809 | 2:+53368932 | None:intergenic |
| AGGTGATGAGTTGGAGAAGT+TGG | 0.308524 | 2:-53367613 | MsG0280009509.01.T01:CDS |
| GACCTAAGCAGAAGAGAAAT+TGG | 0.314600 | 2:-53367530 | MsG0280009509.01.T01:CDS |
| TGAAACTAAGAAGAGTGATT+TGG | 0.317355 | 2:-53367754 | MsG0280009509.01.T01:CDS |
| CTATTAGCTAGTTTATCTTT+TGG | 0.320609 | 2:+53368169 | None:intergenic |
| ATCAAATGGTATTTCACAAA+TGG | 0.321572 | 2:-53368298 | MsG0280009509.01.T01:CDS |
| CTAATGGTTATAGCCCTTTA+GGG | 0.328617 | 2:-53368688 | MsG0280009509.01.T01:CDS |
| GAAGCAATGATGGTGCTTAT+TGG | 0.344274 | 2:-53368201 | MsG0280009509.01.T01:CDS |
| CAAGCTCCTAGTGTTCTTGT+TGG | 0.352506 | 2:-53368497 | MsG0280009509.01.T01:CDS |
| GAAACTAAGAAGAGTGATTT+GGG | 0.354458 | 2:-53367753 | MsG0280009509.01.T01:CDS |
| AATCAACATTCAACAAAATC+TGG | 0.355492 | 2:-53368959 | MsG0280009509.01.T01:CDS |
| TGAGGAAGATTTGAGCCTAA+TGG | 0.365782 | 2:+53368229 | None:intergenic |
| ATTGTTTCTGGGGAGTATTT+GGG | 0.370952 | 2:-53367705 | MsG0280009509.01.T01:CDS |
| TTCAACCATGTTCAATCAAA+TGG | 0.371740 | 2:-53368312 | MsG0280009509.01.T01:CDS |
| GTTGGAGAAGTTGGAGAAGT+TGG | 0.375686 | 2:-53367604 | MsG0280009509.01.T01:CDS |
| AACATTTCACTTGGTAAGAT+AGG | 0.380922 | 2:-53368005 | MsG0280009509.01.T01:CDS |
| AAAATCTGGACAACCTTAGA+AGG | 0.384268 | 2:-53368945 | MsG0280009509.01.T01:CDS |
| TTCTTCACCTATCAACTCAT+TGG | 0.384297 | 2:+53367563 | None:intergenic |
| GCCTAATGGATCAATTTCAT+TGG | 0.385671 | 2:+53368243 | None:intergenic |
| AAGATAAAGATGGTTACATT+TGG | 0.391775 | 2:-53368724 | MsG0280009509.01.T01:CDS |
| AAGTTGGAGAAGTTGGTTCC+TGG | 0.393530 | 2:-53367597 | MsG0280009509.01.T01:CDS |
| CTTCAAGGTACTAGTGAGAT+TGG | 0.399867 | 2:-53367786 | MsG0280009509.01.T01:CDS |
| CTCTTCTGCTTAGGTCCAGT+GGG | 0.408957 | 2:+53367537 | None:intergenic |
| ATCAATGTGAGATTAATTCA+TGG | 0.409369 | 2:-53368595 | MsG0280009509.01.T01:CDS |
| CACAACATAGTAATGGTCAA+TGG | 0.421062 | 2:-53367905 | MsG0280009509.01.T01:CDS |
| TGGTTACCAATAGCACCTAA+TGG | 0.422006 | 2:-53368704 | MsG0280009509.01.T01:CDS |
| CTATAACCATTAGGTGCTAT+TGG | 0.424957 | 2:+53368698 | None:intergenic |
| GCTTGAATACCTCTATTGAT+TGG | 0.429359 | 2:+53368515 | None:intergenic |
| TAGGTGAACATATTGGTGAT+TGG | 0.434346 | 2:-53367986 | MsG0280009509.01.T01:CDS |
| AGGTGAACATATTGGTGATT+GGG | 0.441048 | 2:-53367985 | MsG0280009509.01.T01:CDS |
| CCTAAAGGGCTATAACCATT+AGG | 0.444178 | 2:+53368689 | None:intergenic |
| TATTTATCCAAAAGCTGGAT+TGG | 0.447098 | 2:-53367811 | MsG0280009509.01.T01:CDS |
| TCCAATGAAATTGATCCATT+AGG | 0.450783 | 2:-53368244 | MsG0280009509.01.T01:CDS |
| GGCAGTGGAATCATTGATCT+AGG | 0.451372 | 2:-53369000 | MsG0280009509.01.T01:CDS |
| ATCTAAAGTAAGCTCAATCA+TGG | 0.454273 | 2:-53369295 | MsG0280009509.01.T01:exon |
| ATCAAATTGTTGAGCCAGGT+TGG | 0.455958 | 2:-53367680 | MsG0280009509.01.T01:CDS |
| TCAAATGGTATTTCACAAAT+GGG | 0.456209 | 2:-53368297 | MsG0280009509.01.T01:CDS |
| CATGCTATTTATCCAAAAGC+TGG | 0.456591 | 2:-53367816 | MsG0280009509.01.T01:CDS |
| AAAGCTGGATTGGTTCTTCA+AGG | 0.458586 | 2:-53367801 | MsG0280009509.01.T01:CDS |
| AACCAATTTCTCTTCTGCTT+AGG | 0.465571 | 2:+53367528 | None:intergenic |
| TGGGCATTGCTTTATAAGAA+AGG | 0.466177 | 2:-53368278 | MsG0280009509.01.T01:CDS |
| TTAAGAGTAAGTAACTTCAA+TGG | 0.466888 | 2:-53367951 | MsG0280009509.01.T01:CDS |
| TTATAATTTAGGTGATGAGT+TGG | 0.471376 | 2:-53367622 | MsG0280009509.01.T01:CDS |
| TCAAATTGTTGAGCCAGGTT+GGG | 0.471665 | 2:-53367679 | MsG0280009509.01.T01:CDS |
| CCTCAAGGTGGAAGCAATGA+TGG | 0.478383 | 2:-53368211 | MsG0280009509.01.T01:CDS |
| ACAACATAGTAATGGTCAAT+GGG | 0.479231 | 2:-53367904 | MsG0280009509.01.T01:CDS |
| TGAGTACCTTGTGGCAAAGT+TGG | 0.484565 | 2:+53369198 | None:intergenic |
| GGAAATCAAATTGTTGAGCC+AGG | 0.489502 | 2:-53367684 | MsG0280009509.01.T01:CDS |
| TCTTCACCTATCAACTCATT+GGG | 0.491681 | 2:+53367564 | None:intergenic |
| GGTAAGATAGGTGAACATAT+TGG | 0.495274 | 2:-53367993 | MsG0280009509.01.T01:CDS |
| CTCATAGATAACATTTCACT+TGG | 0.495794 | 2:-53368014 | MsG0280009509.01.T01:CDS |
| AAGCTTAAATGTGGTGTCAA+TGG | 0.498242 | 2:+53369233 | None:intergenic |
| GGCAAAGTTGGTATGTTAGC+TGG | 0.501820 | 2:+53369210 | None:intergenic |
| TCTCTTCTGCTTAGGTCCAG+TGG | 0.506056 | 2:+53367536 | None:intergenic |
| AAGCAGAAGAGAAATTGGTT+TGG | 0.512029 | 2:-53367525 | MsG0280009509.01.T01:CDS |
| TTGTGACAATATGCCCTAAA+GGG | 0.516168 | 2:+53368675 | None:intergenic |
| TTAGGATGCAAGTACATGAA+TGG | 0.525866 | 2:+53368343 | None:intergenic |
| TCTAAAGTAAGCTCAATCAT+GGG | 0.528379 | 2:-53369294 | MsG0280009509.01.T01:exon |
| AGCTTAAATGTGGTGTCAAT+GGG | 0.528640 | 2:+53369234 | None:intergenic |
| TCATTGGGCAATTTCAAGCC+AGG | 0.529228 | 2:+53367579 | None:intergenic |
| TTTAATGAAGAATAAGCCAC+TGG | 0.534311 | 2:+53367843 | None:intergenic |
| AATGAGTTGATAGGTGAAGA+AGG | 0.545267 | 2:-53367561 | MsG0280009509.01.T01:CDS |
| ATAGGTGAAGAAGGGCCCAC+TGG | 0.547362 | 2:-53367552 | MsG0280009509.01.T01:CDS |
| AAAATCAAACAAGATAAAGA+TGG | 0.551254 | 2:-53368734 | MsG0280009509.01.T01:CDS |
| AAATTGCCCAATGAGTTGAT+AGG | 0.552488 | 2:-53367570 | MsG0280009509.01.T01:CDS |
| ATAGGTGGTGGATTTGGCAG+TGG | 0.558162 | 2:-53369015 | MsG0280009509.01.T01:intron |
| CAATGATGGTGCTTATTGGT+TGG | 0.558172 | 2:-53368197 | MsG0280009509.01.T01:CDS |
| TCAGAAGTTGAATTTCAAAG+TGG | 0.558316 | 2:-53367873 | MsG0280009509.01.T01:CDS |
| GTTGTGACAATATGCCCTAA+AGG | 0.575356 | 2:+53368674 | None:intergenic |
| TATGTTAGACCAATCAATAG+AGG | 0.593203 | 2:-53368524 | MsG0280009509.01.T01:CDS |
| AATGTGGTGTCAATGGGAAG+AGG | 0.596119 | 2:+53369240 | None:intergenic |
| AAAGTTCCAACAAGAACACT+AGG | 0.596544 | 2:+53368491 | None:intergenic |
| CCATCATTGCTTCCACCTTG+AGG | 0.597806 | 2:+53368211 | None:intergenic |
| AGAGATTGAATGCTGTGTGT+GGG | 0.600508 | 2:+53369319 | None:intergenic |
| ATGAGTTGATAGGTGAAGAA+GGG | 0.608495 | 2:-53367560 | MsG0280009509.01.T01:CDS |
| CATTGGATTCTATCAAGTGA+AGG | 0.610351 | 2:+53368638 | None:intergenic |
| TTAGGCTCAAATCTTCCTCA+AGG | 0.614815 | 2:-53368226 | MsG0280009509.01.T01:CDS |
| GAGATTAATTCATGGATTTG+GGG | 0.616547 | 2:-53368587 | MsG0280009509.01.T01:CDS |
| ATCTGGACAACCTTAGAAGG+TGG | 0.616813 | 2:-53368942 | MsG0280009509.01.T01:CDS |
| GGCTCAAATCTTCCTCAAGG+TGG | 0.618174 | 2:-53368223 | MsG0280009509.01.T01:CDS |
| AAATACCATTTGATTGAACA+TGG | 0.621650 | 2:+53368307 | None:intergenic |
| AACATACCAACTTTGCCACA+AGG | 0.638221 | 2:-53369204 | MsG0280009509.01.T01:intron |
| CTAAAGTAAGCTCAATCATG+GGG | 0.640331 | 2:-53369293 | MsG0280009509.01.T01:exon |
| TGAGATCTGATCTCACACAT+TGG | 0.647996 | 2:+53368621 | None:intergenic |
| AAGAGATTGAATGCTGTGTG+TGG | 0.651832 | 2:+53369318 | None:intergenic |
| ACAACCTTAGAAGGTGGACA+AGG | 0.671477 | 2:-53368936 | MsG0280009509.01.T01:intron |
| TCAAAGTGGAAATAAACCAG+TGG | 0.680780 | 2:-53367859 | MsG0280009509.01.T01:CDS |
| AGTGGAATCATTGATCTAGG+TGG | 0.690726 | 2:-53368997 | MsG0280009509.01.T01:CDS |
| GTTAGCTGGAAGCTTAAATG+TGG | 0.712615 | 2:+53369224 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCTAAAATTACTTATAATTT+AGG | - | Chr2:53369195-53369214 | MsG0280009509.01.T01:intron | 15.0% |
| !! | GATAAAAAAATTGATGAAAA+AGG | - | Chr2:53368268-53368287 | MsG0280009509.01.T01:CDS | 15.0% |
| !!! | CCTAAATTATAAGTAATTTT+AGG | + | Chr2:53369198-53369217 | None:intergenic | 15.0% |
| !!! | TTAATTTTGAAATTGTTTCT+GGG | - | Chr2:53369112-53369131 | MsG0280009509.01.T01:intron | 15.0% |
| !! | AAAATCAAACAAGATAAAGA+TGG | - | Chr2:53368094-53368113 | MsG0280009509.01.T01:intron | 20.0% |
| !!! | AGATTTTTCAAACAAGAAAT+AGG | + | Chr2:53368398-53368417 | None:intergenic | 20.0% |
| !!! | GTTAATTTTGAAATTGTTTC+TGG | - | Chr2:53369111-53369130 | MsG0280009509.01.T01:intron | 20.0% |
| !!! | TAATTTTGAAATTGTTTCTG+GGG | - | Chr2:53369113-53369132 | MsG0280009509.01.T01:intron | 20.0% |
| !!! | TATTTTTCACAACATAGTAA+TGG | - | Chr2:53368916-53368935 | MsG0280009509.01.T01:intron | 20.0% |
| ! | AAATACCATTTGATTGAACA+TGG | + | Chr2:53368524-53368543 | None:intergenic | 25.0% |
| ! | AAGATAAAGATGGTTACATT+TGG | - | Chr2:53368104-53368123 | MsG0280009509.01.T01:intron | 25.0% |
| ! | AATAGAGAAAGAGTCAAAAA+AGG | - | Chr2:53368677-53368696 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | AATCAACATTCAACAAAATC+TGG | - | Chr2:53367869-53367888 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | ATCAAATGGTATTTCACAAA+TGG | - | Chr2:53368530-53368549 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | ATCAATGTGAGATTAATTCA+TGG | - | Chr2:53368233-53368252 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | TCAAATGGTATTTCACAAAT+GGG | - | Chr2:53368531-53368550 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | TGAGATTAATTCATGGATTT+GGG | - | Chr2:53368240-53368259 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | TTAAGAGTAAGTAACTTCAA+TGG | - | Chr2:53368877-53368896 | MsG0280009509.01.T01:intron | 25.0% |
| ! | TTATAATTTAGGTGATGAGT+TGG | - | Chr2:53369206-53369225 | MsG0280009509.01.T01:CDS | 25.0% |
| ! | TTTCATGTAAAACCAATGTT+TGG | - | Chr2:53368724-53368743 | MsG0280009509.01.T01:CDS | 25.0% |
| !!! | AACTTTGCATTGTTTTGTAT+AGG | - | Chr2:53367795-53367814 | MsG0280009509.01.T01:CDS | 25.0% |
| !!! | CTATTAGCTAGTTTATCTTT+TGG | + | Chr2:53368662-53368681 | None:intergenic | 25.0% |
| !!! | GGTGAATTTTTTTAGACAAT+GGG | - | Chr2:53369170-53369189 | MsG0280009509.01.T01:intron | 25.0% |
| !!! | GTGAATTTTTTTAGACAATG+GGG | - | Chr2:53369171-53369190 | MsG0280009509.01.T01:intron | 25.0% |
| AACATTTCACTTGGTAAGAT+AGG | - | Chr2:53368823-53368842 | MsG0280009509.01.T01:intron | 30.0% | |
| ACAACATAGTAATGGTCAAT+GGG | - | Chr2:53368924-53368943 | MsG0280009509.01.T01:intron | 30.0% | |
| AGGTGATTTCAAAAATGTCA+AGG | - | Chr2:53368697-53368716 | MsG0280009509.01.T01:CDS | 30.0% | |
| CAATTGATTACACACTTGTT+TGG | - | Chr2:53368056-53368075 | MsG0280009509.01.T01:intron | 30.0% | |
| CTCATAGATAACATTTCACT+TGG | - | Chr2:53368814-53368833 | MsG0280009509.01.T01:intron | 30.0% | |
| GAAACTAAGAAGAGTGATTT+GGG | - | Chr2:53369075-53369094 | MsG0280009509.01.T01:intron | 30.0% | |
| GAGATTAATTCATGGATTTG+GGG | - | Chr2:53368241-53368260 | MsG0280009509.01.T01:CDS | 30.0% | |
| GATAATTTCTTGTCGGAATT+TGG | + | Chr2:53367688-53367707 | None:intergenic | 30.0% | |
| GTGAGATTAATTCATGGATT+TGG | - | Chr2:53368239-53368258 | MsG0280009509.01.T01:CDS | 30.0% | |
| GTGGCTTATTCTTCATTAAA+TGG | - | Chr2:53368988-53369007 | MsG0280009509.01.T01:CDS | 30.0% | |
| TATGTTAGACCAATCAATAG+AGG | - | Chr2:53368304-53368323 | MsG0280009509.01.T01:CDS | 30.0% | |
| TATTTATCCAAAAGCTGGAT+TGG | - | Chr2:53369017-53369036 | MsG0280009509.01.T01:intron | 30.0% | |
| TCAAACAAGAAATAGGAAGA+GGG | + | Chr2:53368391-53368410 | None:intergenic | 30.0% | |
| TCAGAAGTTGAATTTCAAAG+TGG | - | Chr2:53368955-53368974 | MsG0280009509.01.T01:CDS | 30.0% | |
| TCCAATGAAATTGATCCATT+AGG | - | Chr2:53368584-53368603 | MsG0280009509.01.T01:CDS | 30.0% | |
| TGAAACTAAGAAGAGTGATT+TGG | - | Chr2:53369074-53369093 | MsG0280009509.01.T01:intron | 30.0% | |
| TGGTGAAAATACTATCAAGA+AGG | + | Chr2:53367668-53367687 | None:intergenic | 30.0% | |
| TTAAAGGGTAAAAATCCACA+TGG | + | Chr2:53368769-53368788 | None:intergenic | 30.0% | |
| TTCAAACAAGAAATAGGAAG+AGG | + | Chr2:53368392-53368411 | None:intergenic | 30.0% | |
| TTCAACCATGTTCAATCAAA+TGG | - | Chr2:53368516-53368535 | MsG0280009509.01.T01:CDS | 30.0% | |
| TTCAATGGAGAGTTAAAAAG+TGG | - | Chr2:53368892-53368911 | MsG0280009509.01.T01:intron | 30.0% | |
| TTCTGTCGATAATTTCTTGT+CGG | + | Chr2:53367695-53367714 | None:intergenic | 30.0% | |
| TTTAATGAAGAATAAGCCAC+TGG | + | Chr2:53368988-53369007 | None:intergenic | 30.0% | |
| ! | ATCTAAAGTAAGCTCAATCA+TGG | - | Chr2:53367533-53367552 | MsG0280009509.01.T01:CDS | 30.0% |
| ! | CATGGTTGAAACTTTTCATT+AGG | + | Chr2:53368506-53368525 | None:intergenic | 30.0% |
| ! | GTGGATTTTTACCCTTTAAT+GGG | - | Chr2:53368770-53368789 | MsG0280009509.01.T01:intron | 30.0% |
| ! | TCTAAAGTAAGCTCAATCAT+GGG | - | Chr2:53367534-53367553 | MsG0280009509.01.T01:CDS | 30.0% |
| ! | TGTGGATTTTTACCCTTTAA+TGG | - | Chr2:53368769-53368788 | MsG0280009509.01.T01:intron | 30.0% |
| !! | TTTGCATTGTTTTGTATAGG+TGG | - | Chr2:53367798-53367817 | MsG0280009509.01.T01:CDS | 30.0% |
| !!! | AGTGATTTGGGTATTGATTT+TGG | - | Chr2:53369087-53369106 | MsG0280009509.01.T01:intron | 30.0% |
| !!! | GGGTGAATTTTTTTAGACAA+TGG | - | Chr2:53369169-53369188 | MsG0280009509.01.T01:intron | 30.0% |
| !!! | TGTTGATTTGTGACACTTTT+AGG | + | Chr2:53367857-53367876 | None:intergenic | 30.0% |
| AAAATCTGGACAACCTTAGA+AGG | - | Chr2:53367883-53367902 | MsG0280009509.01.T01:CDS | 35.0% | |
| AAAGTTCCAACAAGAACACT+AGG | + | Chr2:53368340-53368359 | None:intergenic | 35.0% | |
| AACCAATTTCTCTTCTGCTT+AGG | + | Chr2:53369303-53369322 | None:intergenic | 35.0% | |
| AAGCAGAAGAGAAATTGGTT+TGG | - | Chr2:53369303-53369322 | MsG0280009509.01.T01:five_prime_UTR | 35.0% | |
| AGTAAATGTCCACCAAACAT+TGG | + | Chr2:53368739-53368758 | None:intergenic | 35.0% | |
| CACAACATAGTAATGGTCAA+TGG | - | Chr2:53368923-53368942 | MsG0280009509.01.T01:intron | 35.0% | |
| CATGTAAAACCAATGTTTGG+TGG | - | Chr2:53368727-53368746 | MsG0280009509.01.T01:CDS | 35.0% | |
| CATTGGATTCTATCAAGTGA+AGG | + | Chr2:53368193-53368212 | None:intergenic | 35.0% | |
| CTAAAAAAATTCACCCAACC+TGG | + | Chr2:53369165-53369184 | None:intergenic | 35.0% | |
| CTAAAGTAAGCTCAATCATG+GGG | - | Chr2:53367535-53367554 | MsG0280009509.01.T01:CDS | 35.0% | |
| CTAATGGTTATAGCCCTTTA+GGG | - | Chr2:53368140-53368159 | MsG0280009509.01.T01:intron | 35.0% | |
| GCCTAATTTACCCCAAATTA+AGG | - | Chr2:53368442-53368461 | MsG0280009509.01.T01:intron | 35.0% | |
| GCTTGAATACCTCTATTGAT+TGG | + | Chr2:53368316-53368335 | None:intergenic | 35.0% | |
| GGTAAGATAGGTGAACATAT+TGG | - | Chr2:53368835-53368854 | MsG0280009509.01.T01:intron | 35.0% | |
| TCAAAGTGGAAATAAACCAG+TGG | - | Chr2:53368969-53368988 | MsG0280009509.01.T01:CDS | 35.0% | |
| TCTTCACCTATCAACTCATT+GGG | + | Chr2:53369267-53369286 | None:intergenic | 35.0% | |
| TTAGGATGCAAGTACATGAA+TGG | + | Chr2:53368488-53368507 | None:intergenic | 35.0% | |
| TTCTTCACCTATCAACTCAT+TGG | + | Chr2:53369268-53369287 | None:intergenic | 35.0% | |
| TTGTGACAATATGCCCTAAA+GGG | + | Chr2:53368156-53368175 | None:intergenic | 35.0% | |
| TTGTGCTAGTGCCTTAATTT+GGG | + | Chr2:53368456-53368475 | None:intergenic | 35.0% | |
| ! | AAGCTTAAATGTGGTGTCAA+TGG | + | Chr2:53367598-53367617 | None:intergenic | 35.0% |
| ! | AGCTTAAATGTGGTGTCAAT+GGG | + | Chr2:53367597-53367616 | None:intergenic | 35.0% |
| ! | AGGTGAACATATTGGTGATT+GGG | - | Chr2:53368843-53368862 | MsG0280009509.01.T01:intron | 35.0% |
| ! | CATGCTATTTATCCAAAAGC+TGG | - | Chr2:53369012-53369031 | MsG0280009509.01.T01:CDS | 35.0% |
| ! | CTATAACCATTAGGTGCTAT+TGG | + | Chr2:53368133-53368152 | None:intergenic | 35.0% |
| ! | GCCTAATGGATCAATTTCAT+TGG | + | Chr2:53368588-53368607 | None:intergenic | 35.0% |
| ! | GCCTTAATTTGGGGTAAATT+AGG | + | Chr2:53368446-53368465 | None:intergenic | 35.0% |
| ! | TAGGTGAACATATTGGTGAT+TGG | - | Chr2:53368842-53368861 | MsG0280009509.01.T01:intron | 35.0% |
| ! | TGGGCATTGCTTTATAAGAA+AGG | - | Chr2:53368550-53368569 | MsG0280009509.01.T01:CDS | 35.0% |
| ! | TTGGTGGACATTTACTGATT+TGG | - | Chr2:53368743-53368762 | MsG0280009509.01.T01:CDS | 35.0% |
| !! | AAATTGCCCAATGAGTTGAT+AGG | - | Chr2:53369258-53369277 | MsG0280009509.01.T01:CDS | 35.0% |
| !! | AATGAGTTGATAGGTGAAGA+AGG | - | Chr2:53369267-53369286 | MsG0280009509.01.T01:CDS | 35.0% |
| !! | AATTGTTTCTGGGGAGTATT+TGG | - | Chr2:53369122-53369141 | MsG0280009509.01.T01:intron | 35.0% |
| !! | ATGAGTTGATAGGTGAAGAA+GGG | - | Chr2:53369268-53369287 | MsG0280009509.01.T01:CDS | 35.0% |
| !! | ATTGTTTCTGGGGAGTATTT+GGG | - | Chr2:53369123-53369142 | MsG0280009509.01.T01:intron | 35.0% |
| !!! | TGGAACTTTTTTAGCACAGT+TGG | - | Chr2:53368351-53368370 | MsG0280009509.01.T01:CDS | 35.0% |
| !!! | TTTTGTATAGGTGGTGGATT+TGG | - | Chr2:53367807-53367826 | MsG0280009509.01.T01:CDS | 35.0% |
| AACATACCAACTTTGCCACA+AGG | - | Chr2:53367624-53367643 | MsG0280009509.01.T01:CDS | 40.0% | |
| ACAACAAACCTCTCTTTGGT+TGG | - | Chr2:53367991-53368010 | MsG0280009509.01.T01:CDS | 40.0% | |
| ACCTAATGTGAAGAACCTTG+AGG | + | Chr2:53367955-53367974 | None:intergenic | 40.0% | |
| ACCTCAAGGTTCTTCACATT+AGG | - | Chr2:53367951-53367970 | MsG0280009509.01.T01:CDS | 40.0% | |
| AGTGGAATCATTGATCTAGG+TGG | - | Chr2:53367831-53367850 | MsG0280009509.01.T01:CDS | 40.0% | |
| ATCAAATTGTTGAGCCAGGT+TGG | - | Chr2:53369148-53369167 | MsG0280009509.01.T01:intron | 40.0% | |
| CAACAAACCTCTCTTTGGTT+GGG | - | Chr2:53367992-53368011 | MsG0280009509.01.T01:CDS | 40.0% | |
| CCAAACAACAAACCTCTCTT+TGG | - | Chr2:53367987-53368006 | MsG0280009509.01.T01:CDS | 40.0% | |
| CCTAAAGGGCTATAACCATT+AGG | + | Chr2:53368142-53368161 | None:intergenic | 40.0% | |
| CCTAATGGTTATAGCCCTTT+AGG | - | Chr2:53368139-53368158 | MsG0280009509.01.T01:intron | 40.0% | |
| CTTGTGCTAGTGCCTTAATT+TGG | + | Chr2:53368457-53368476 | None:intergenic | 40.0% | |
| GACCTAAGCAGAAGAGAAAT+TGG | - | Chr2:53369298-53369317 | MsG0280009509.01.T01:exon | 40.0% | |
| GCAACTTTCTTTGAACCAAC+AGG | - | Chr2:53367925-53367944 | MsG0280009509.01.T01:CDS | 40.0% | |
| GGAAATCAAATTGTTGAGCC+AGG | - | Chr2:53369144-53369163 | MsG0280009509.01.T01:intron | 40.0% | |
| GTTAGCTGGAAGCTTAAATG+TGG | + | Chr2:53367607-53367626 | None:intergenic | 40.0% | |
| GTTGCCAAAGATGAGTCAAA+TGG | - | Chr2:53368020-53368039 | MsG0280009509.01.T01:CDS | 40.0% | |
| GTTGTGACAATATGCCCTAA+AGG | + | Chr2:53368157-53368176 | None:intergenic | 40.0% | |
| TCAAATTGTTGAGCCAGGTT+GGG | - | Chr2:53369149-53369168 | MsG0280009509.01.T01:intron | 40.0% | |
| TGAAAGAGATGAGTACCTTG+TGG | + | Chr2:53367642-53367661 | None:intergenic | 40.0% | |
| TGAGATCTGATCTCACACAT+TGG | + | Chr2:53368210-53368229 | None:intergenic | 40.0% | |
| TGAGGAAGATTTGAGCCTAA+TGG | + | Chr2:53368602-53368621 | None:intergenic | 40.0% | |
| TGCTCCATTTGACTCATCTT+TGG | + | Chr2:53368027-53368046 | None:intergenic | 40.0% | |
| TGGTTACCAATAGCACCTAA+TGG | - | Chr2:53368124-53368143 | MsG0280009509.01.T01:intron | 40.0% | |
| TTAGGCTCAAATCTTCCTCA+AGG | - | Chr2:53368602-53368621 | MsG0280009509.01.T01:CDS | 40.0% | |
| ! | CAATGATGGTGCTTATTGGT+TGG | - | Chr2:53368631-53368650 | MsG0280009509.01.T01:CDS | 40.0% |
| ! | CTATCAAGTGAAGGCTTTTC+AGG | + | Chr2:53368184-53368203 | None:intergenic | 40.0% |
| ! | CTTCAAGGTACTAGTGAGAT+TGG | - | Chr2:53369042-53369061 | MsG0280009509.01.T01:intron | 40.0% |
| ! | GAAGCAATGATGGTGCTTAT+TGG | - | Chr2:53368627-53368646 | MsG0280009509.01.T01:CDS | 40.0% |
| ! | TGAAGAACCAATCCAGCTTT+TGG | + | Chr2:53369027-53369046 | None:intergenic | 40.0% |
| ! | TGTGCTAGTGCCTTAATTTG+GGG | + | Chr2:53368455-53368474 | None:intergenic | 40.0% |
| !! | AAAGCTGGATTGGTTCTTCA+AGG | - | Chr2:53369027-53369046 | MsG0280009509.01.T01:intron | 40.0% |
| !! | CATTTACTGATTTGGCCATG+TGG | - | Chr2:53368751-53368770 | MsG0280009509.01.T01:intron | 40.0% |
| !! | CCAAAGAGAGGTTTGTTGTT+TGG | + | Chr2:53367990-53368009 | None:intergenic | 40.0% |
| !! | GCATTGTTTTGTATAGGTGG+TGG | - | Chr2:53367801-53367820 | MsG0280009509.01.T01:CDS | 40.0% |
| !! | TTTTTACCCTTTAATGGGCC+TGG | - | Chr2:53368775-53368794 | MsG0280009509.01.T01:intron | 40.0% |
| AATGTGCCAGGCCCATTAAA+GGG | + | Chr2:53368784-53368803 | None:intergenic | 45.0% | |
| ACAACCTTAGAAGGTGGACA+AGG | - | Chr2:53367892-53367911 | MsG0280009509.01.T01:CDS | 45.0% | |
| ACTAGAACCCAACCAAAGAG+AGG | + | Chr2:53368002-53368021 | None:intergenic | 45.0% | |
| ATCTGGACAACCTTAGAAGG+TGG | - | Chr2:53367886-53367905 | MsG0280009509.01.T01:CDS | 45.0% | |
| CAAGCTCCTAGTGTTCTTGT+TGG | - | Chr2:53368331-53368350 | MsG0280009509.01.T01:CDS | 45.0% | |
| GAACCAACAGGAATACCTCA+AGG | - | Chr2:53367937-53367956 | MsG0280009509.01.T01:CDS | 45.0% | |
| GGCAGTGGAATCATTGATCT+AGG | - | Chr2:53367828-53367847 | MsG0280009509.01.T01:CDS | 45.0% | |
| GGCCTGGCACATTAAAAGTT+GGG | - | Chr2:53368791-53368810 | MsG0280009509.01.T01:intron | 45.0% | |
| GTTGGAGAAGTTGGAGAAGT+TGG | - | Chr2:53369224-53369243 | MsG0280009509.01.T01:CDS | 45.0% | |
| TAATGTGCCAGGCCCATTAA+AGG | + | Chr2:53368785-53368804 | None:intergenic | 45.0% | |
| TCATTGGGCAATTTCAAGCC+AGG | + | Chr2:53369252-53369271 | None:intergenic | 45.0% | |
| TGAGTACCTTGTGGCAAAGT+TGG | + | Chr2:53367633-53367652 | None:intergenic | 45.0% | |
| ! | AAGTTGGAGAAGTTGGTTCC+TGG | - | Chr2:53369231-53369250 | MsG0280009509.01.T01:CDS | 45.0% |
| ! | AATGTGGTGTCAATGGGAAG+AGG | + | Chr2:53367591-53367610 | None:intergenic | 45.0% |
| ! | AGCCCAACTTTTAATGTGCC+AGG | + | Chr2:53368796-53368815 | None:intergenic | 45.0% |
| ! | AGGTGATGAGTTGGAGAAGT+TGG | - | Chr2:53369215-53369234 | MsG0280009509.01.T01:CDS | 45.0% |
| ! | GAACCTTGAGGTATTCCTGT+TGG | + | Chr2:53367943-53367962 | None:intergenic | 45.0% |
| !! | CAATGGGAAGAGGCTTTTTC+TGG | + | Chr2:53367581-53367600 | None:intergenic | 45.0% |
| !! | GGCAAAGTTGGTATGTTAGC+TGG | + | Chr2:53367621-53367640 | None:intergenic | 45.0% |
| !!! | AAGTGAAGGCTTTTCAGGTG+TGG | + | Chr2:53368179-53368198 | None:intergenic | 45.0% |
| CCATCATTGCTTCCACCTTG+AGG | + | Chr2:53368620-53368639 | None:intergenic | 50.0% | |
| CCTCAAGGTGGAAGCAATGA+TGG | - | Chr2:53368617-53368636 | MsG0280009509.01.T01:CDS | 50.0% | |
| CTCTTCTGCTTAGGTCCAGT+GGG | + | Chr2:53369294-53369313 | None:intergenic | 50.0% | |
| GAAGGTGGACAAGGTGACTT+AGG | - | Chr2:53367901-53367920 | MsG0280009509.01.T01:CDS | 50.0% | |
| GGCTCAAATCTTCCTCAAGG+TGG | - | Chr2:53368605-53368624 | MsG0280009509.01.T01:CDS | 50.0% | |
| GGGCCTGGCACATTAAAAGT+TGG | - | Chr2:53368790-53368809 | MsG0280009509.01.T01:intron | 50.0% | |
| GTCACCTTGTCCACCTTCTA+AGG | + | Chr2:53367899-53367918 | None:intergenic | 50.0% | |
| TCTCTTCTGCTTAGGTCCAG+TGG | + | Chr2:53369295-53369314 | None:intergenic | 50.0% | |
| !! | ATAGGTGGTGGATTTGGCAG+TGG | - | Chr2:53367813-53367832 | MsG0280009509.01.T01:CDS | 50.0% |
| ATAGGTGAAGAAGGGCCCAC+TGG | - | Chr2:53369276-53369295 | MsG0280009509.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 53367512 | 53369338 | 53367512 | ID=MsG0280009509.01;Name=MsG0280009509.01 |
| Chr2 | mRNA | 53367512 | 53369338 | 53367512 | ID=MsG0280009509.01.T01;Parent=MsG0280009509.01;Name=MsG0280009509.01.T01;_AED=0.20;_eAED=0.20;_QI=40|0.25|0.2|1|1|1|5|0|414 |
| Chr2 | exon | 53367512 | 53368041 | 53367512 | ID=MsG0280009509.01.T01:exon:17618;Parent=MsG0280009509.01.T01 |
| Chr2 | exon | 53368152 | 53368386 | 53368152 | ID=MsG0280009509.01.T01:exon:17617;Parent=MsG0280009509.01.T01 |
| Chr2 | exon | 53368478 | 53368766 | 53368478 | ID=MsG0280009509.01.T01:exon:17616;Parent=MsG0280009509.01.T01 |
| Chr2 | exon | 53368937 | 53369033 | 53368937 | ID=MsG0280009509.01.T01:exon:17615;Parent=MsG0280009509.01.T01 |
| Chr2 | exon | 53369205 | 53369338 | 53369205 | ID=MsG0280009509.01.T01:exon:17614;Parent=MsG0280009509.01.T01 |
| Chr2 | five_prime_UTR | 53369299 | 53369338 | 53369299 | ID=MsG0280009509.01.T01:five_prime_utr;Parent=MsG0280009509.01.T01 |
| Chr2 | CDS | 53369205 | 53369298 | 53369205 | ID=MsG0280009509.01.T01:cds;Parent=MsG0280009509.01.T01 |
| Chr2 | CDS | 53368937 | 53369033 | 53368937 | ID=MsG0280009509.01.T01:cds;Parent=MsG0280009509.01.T01 |
| Chr2 | CDS | 53368478 | 53368766 | 53368478 | ID=MsG0280009509.01.T01:cds;Parent=MsG0280009509.01.T01 |
| Chr2 | CDS | 53368152 | 53368386 | 53368152 | ID=MsG0280009509.01.T01:cds;Parent=MsG0280009509.01.T01 |
| Chr2 | CDS | 53367512 | 53368041 | 53367512 | ID=MsG0280009509.01.T01:cds;Parent=MsG0280009509.01.T01 |
| Gene Sequence |
| Protein sequence |
