AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047559.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047559.01.T01 MTR_4g130180 80.556 180 23 3 53 228 2 173 1.82e-90 264
MsG0880047559.01.T01 MTR_5g015710 84.091 44 7 0 1 44 163 206 1.85e-18 80.9
MsG0880047559.01.T01 MTR_1g064700 84.091 44 7 0 1 44 148 191 2.42e-18 80.1
MsG0880047559.01.T01 MTR_6g035400 86.364 44 6 0 1 44 399 442 3.54e-18 82.8
MsG0880047559.01.T01 MTR_5g071805 81.818 44 8 0 1 44 75 118 7.95e-18 76.6
MsG0880047559.01.T01 MTR_4g132765 84.091 44 7 0 1 44 978 1021 2.34e-17 80.9
MsG0880047559.01.T01 MTR_7g004990 79.545 44 9 0 1 44 97 140 4.00e-16 72.8
MsG0880047559.01.T01 MTR_3g087410 81.818 44 8 0 1 44 253 296 4.77e-16 75.9
MsG0880047559.01.T01 MTR_7g056013 79.545 44 9 0 1 44 453 496 1.42e-15 75.5
MsG0880047559.01.T01 MTR_8g017510 79.545 44 9 0 1 44 185 228 3.41e-15 72.4
MsG0880047559.01.T01 MTR_6g084230 82.051 39 7 0 1 39 185 223 5.44e-15 73.2
MsG0880047559.01.T01 MTR_4g066180 84.211 38 6 0 1 38 128 165 2.08e-14 68.9
MsG0880047559.01.T01 MTR_2g061890 80.435 46 7 1 1 44 329 374 3.68e-14 70.9
MsG0880047559.01.T01 MTR_3g075060 81.579 38 7 0 7 44 170 207 1.50e-13 67.4
MsG0880047559.01.T01 MTR_0700s0010 85.294 34 5 0 11 44 109 142 4.34e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047559.01.T01 AT2G23940 78.723 141 30 0 88 228 33 173 9.56e-82 242
MsG0880047559.01.T01 AT2G23940 78.723 141 30 0 88 228 33 173 9.56e-82 242
MsG0880047559.01.T01 AT2G23940 78.723 141 30 0 88 228 33 173 9.56e-82 242
MsG0880047559.01.T01 AT4G30500 71.631 141 40 0 88 228 33 173 3.71e-71 215

Find 70 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCATCAATCTTGGATAAT+TGG 0.115218 8:-88084473 None:intergenic
TTTCTTGTGCTCCTCTATTT+AGG 0.119107 8:+88084569 MsG0880047559.01.T01:three_prime_UTR
AATCCTTTGGCTTGATTAAA+AGG 0.125674 8:+88084218 MsG0880047559.01.T01:CDS
TTTCTTGTGCTCCTCTATTT+AGG 0.217975 8:+88084724 MsG0880047559.01.T01:three_prime_UTR
TGCTCATTTGTTGGTTTCTT+TGG 0.234305 8:-88079060 None:intergenic
TTCTTGTGCTCCTCTATTTA+GGG 0.258325 8:+88084570 MsG0880047559.01.T01:three_prime_UTR
CATCTTAGCAAGTTGTTGAT+AGG 0.292767 8:-88081455 None:intergenic
TTCGGAGTGTCCAAAGTAAT+AGG 0.314770 8:-88079087 None:intergenic
GTTGGTTTCTTTGGCGGCTT+CGG 0.332606 8:-88079051 None:intergenic
GGCAATATGGACATTTACTT+TGG 0.342764 8:+88080976 MsG0880047559.01.T01:CDS
CCCCGATAAGCTCATGTCTA+AGG 0.354608 8:+88079026 None:intergenic
TCGCCACCGGTAACGTTGTT+TGG 0.355878 8:+88081088 MsG0880047559.01.T01:CDS
CTCTCACCAAACAACGTTAC+CGG 0.360039 8:-88081094 None:intergenic
ATCTAAAAGCTCACCGTCTT+GGG 0.363264 8:-88081494 None:intergenic
TGACTACTGGTGGAGTTTGC+GGG 0.388521 8:+88081530 MsG0880047559.01.T01:CDS
TGGGAATGAGCAGAACCGTT+TGG 0.397301 8:+88080996 MsG0880047559.01.T01:CDS
CCATCATCTCTGGAAAGTTC+TGG 0.397340 8:+88082326 MsG0880047559.01.T01:CDS
CAAGCCAATCCAATGCTTCC+AGG 0.397383 8:-88081404 None:intergenic
GGGAATGAGCAGAACCGTTT+GGG 0.399772 8:+88080997 MsG0880047559.01.T01:CDS
TAAGTCACGCAGGGGCAATA+TGG 0.400306 8:+88080963 MsG0880047559.01.T01:intron
TCCATCAATCTTGGATAATT+GGG 0.400313 8:-88084472 None:intergenic
AATTTATAAAAGTTCTTGTA+AGG 0.400644 8:+88084622 MsG0880047559.01.T01:three_prime_UTR
TGAGCACAATCCTATTACTT+TGG 0.401066 8:+88079077 MsG0880047559.01.T01:CDS
TTTGGAGCATACCAATCCTT+TGG 0.411793 8:+88084205 MsG0880047559.01.T01:CDS
ATTTGTCAGATACCAGCATT+TGG 0.414553 8:+88084187 MsG0880047559.01.T01:intron
ATGAAAAGACCCGCAAGAAA+AGG 0.419275 8:+88084359 MsG0880047559.01.T01:CDS
GTAAAACCCTCCATCAATCT+TGG 0.421219 8:-88084481 None:intergenic
GCAATATGGACATTTACTTT+GGG 0.422000 8:+88080977 MsG0880047559.01.T01:CDS
AATTGGGTGATATGTGCAAC+TGG 0.435068 8:-88084456 None:intergenic
CAATTATAAAAGTTCTTGTA+AGG 0.439946 8:+88084776 MsG0880047559.01.T01:three_prime_UTR
CTGGAAGCATTGGATTGGCT+TGG 0.440533 8:+88081405 MsG0880047559.01.T01:CDS
TCATTTGTTGGTTTCTTTGG+CGG 0.440650 8:-88079057 None:intergenic
CTAGCTTCACCTGGAAGCAT+TGG 0.442403 8:+88081395 MsG0880047559.01.T01:CDS
TGTCTTGACAAACTTAGGTC+TGG 0.445497 8:-88084404 None:intergenic
AAGGGAAAAGATGGAGAAGA+AGG 0.445950 8:+88084378 MsG0880047559.01.T01:CDS
AGGACTAGCCTCTGGATACT+TGG 0.447980 8:+88084642 MsG0880047559.01.T01:three_prime_UTR
CTATCAACAACTTGCTAAGA+TGG 0.453545 8:+88081456 MsG0880047559.01.T01:CDS
CAAGTCGCTTCCATCATCTC+TGG 0.460619 8:+88082316 MsG0880047559.01.T01:CDS
ACACGAACTAGATAGTTTGC+TGG 0.460935 8:+88084424 MsG0880047559.01.T01:exon
CATCTAAAAGCTCACCGTCT+TGG 0.461805 8:-88081495 None:intergenic
TCTTGTAAGGACTAGCCTCT+TGG 0.464411 8:+88084789 MsG0880047559.01.T01:three_prime_UTR
TGAAAAGACCCGCAAGAAAA+GGG 0.467032 8:+88084360 MsG0880047559.01.T01:CDS
CCGCAAGAAAAGGGAAAAGA+TGG 0.467797 8:+88084369 MsG0880047559.01.T01:CDS
GCTTCCAGGTGAAGCTAGAA+TGG 0.471678 8:-88081390 None:intergenic
CCAGAACTTTCCAGAGATGA+TGG 0.477172 8:-88082326 None:intergenic
ATAGGATTGTGCTCATTTGT+TGG 0.477823 8:-88079069 None:intergenic
ATTATGCACTATCACTAGTC+TGG 0.483310 8:+88079151 MsG0880047559.01.T01:CDS
GGGTAAAGAGCAGAATTCTT+CGG 0.484121 8:+88081017 MsG0880047559.01.T01:CDS
ATCTTAGCAAGTTGTTGATA+GGG 0.495823 8:-88081454 None:intergenic
AATTCTGCTCTTTACCCAAA+CGG 0.500201 8:-88081011 None:intergenic
AAATAGAGGAGCACAAGAAA+AGG 0.501007 8:-88084566 None:intergenic
AAATAGAGGAGCACAAGAAA+AGG 0.501007 8:-88084721 None:intergenic
ACCCAATTATCCAAGATTGA+TGG 0.502312 8:+88084471 MsG0880047559.01.T01:three_prime_UTR
ATGACTACTGGTGGAGTTTG+CGG 0.504873 8:+88081529 MsG0880047559.01.T01:CDS
GATTGGTATGCTCCAAATGC+TGG 0.509174 8:-88084199 None:intergenic
TTCACCTGGAAGCATTGGAT+TGG 0.509382 8:+88081400 MsG0880047559.01.T01:CDS
GTTCGTGTCTTGACAAACTT+AGG 0.524815 8:-88084409 None:intergenic
TTCTTGTAAGGACTAGCCTC+TGG 0.526053 8:+88084634 MsG0880047559.01.T01:three_prime_UTR
TCACCGTCTTGGGTATAACT+AGG 0.527034 8:-88081484 None:intergenic
TCTTCCATTCTAGCTTCACC+TGG 0.546155 8:+88081386 MsG0880047559.01.T01:CDS
CAATTATCCAAGATTGATGG+AGG 0.583920 8:+88084474 MsG0880047559.01.T01:three_prime_UTR
GGGAAAATAATAAGCTAGAG+AGG 0.590375 8:-88081434 None:intergenic
AGCAGCGACTTCATCGCCAC+CGG 0.602292 8:+88081075 MsG0880047559.01.T01:CDS
GTTCTGGTACATATATCTTG+TGG 0.618251 8:+88082342 MsG0880047559.01.T01:CDS
AATTATCCAAGATTGATGGA+GGG 0.626335 8:+88084475 MsG0880047559.01.T01:three_prime_UTR
AAACCTAGTTATACCCAAGA+CGG 0.654127 8:+88081481 MsG0880047559.01.T01:CDS
CTCATAGTCCAAGTATCCAG+AGG 0.672942 8:-88084650 None:intergenic
TCACCAAACAACGTTACCGG+TGG 0.686562 8:-88081091 None:intergenic
GACCATACCTCTGAACCTTG+TGG 0.690357 8:-88084247 None:intergenic
ATTGGGTGATATGTGCAACT+GGG 0.734584 8:-88084455 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATATTAGTTACATAT+TGG - Chr8:88079285-88079304 None:intergenic 10.0%
!! ATTCTAATTTAAAAATGAAT+TGG + Chr8:88079843-88079862 MsG0880047559.01.T01:intron 10.0%
!! ATTTATTTATGAATTATATC+AGG + Chr8:88083175-88083194 MsG0880047559.01.T01:intron 10.0%
!! TTCATAAATAAATAAATACT+AGG - Chr8:88083168-88083187 None:intergenic 10.0%
!! TTCTAATTTAAAAATGAATT+GGG + Chr8:88079844-88079863 MsG0880047559.01.T01:intron 10.0%
!! TTTATTTATGAATTATATCA+GGG + Chr8:88083176-88083195 MsG0880047559.01.T01:intron 10.0%
!! AAATATCAAAATTACACAAT+CGG - Chr8:88079258-88079277 None:intergenic 15.0%
!! AATTTATAAAAGTTCTTGTA+AGG + Chr8:88084622-88084641 MsG0880047559.01.T01:three_prime_UTR 15.0%
!! AGGTTATTTATGTAATAATT+AGG + Chr8:88081356-88081375 MsG0880047559.01.T01:intron 15.0%
!! TAAGTGTGTTTAAATTATTA+CGG + Chr8:88079344-88079363 MsG0880047559.01.T01:intron 15.0%
!! TTATTTATGAATTATATCAG+GGG + Chr8:88083177-88083196 MsG0880047559.01.T01:intron 15.0%
!!! AGTTTAGATTTTTTAGATTT+AGG - Chr8:88080570-88080589 None:intergenic 15.0%
!!! GTTTAGATTTTTTAGATTTA+GGG - Chr8:88080569-88080588 None:intergenic 15.0%
!!! TTGTGTAATTTTGATATTTA+TGG + Chr8:88079259-88079278 MsG0880047559.01.T01:intron 15.0%
!! AAGTGTGTTTAAATTATTAC+GGG + Chr8:88079345-88079364 MsG0880047559.01.T01:intron 20.0%
!! ACTGTATCTTGATTTAAAAA+TGG + Chr8:88081859-88081878 MsG0880047559.01.T01:intron 20.0%
!! ACTTCATTTATCTATATAGT+TGG - Chr8:88082185-88082204 None:intergenic 20.0%
!! ATATTGGGACATATATAAAA+TGG + Chr8:88084097-88084116 MsG0880047559.01.T01:intron 20.0%
!! CAATTATAAAAGTTCTTGTA+AGG + Chr8:88084776-88084795 MsG0880047559.01.T01:three_prime_UTR 20.0%
!! CTCTTGTAATGATTAATAAA+GGG - Chr8:88084128-88084147 None:intergenic 20.0%
!! CTTCATTTATCTATATAGTT+GGG - Chr8:88082184-88082203 None:intergenic 20.0%
!! TCCATAAACTTATCTTAATA+GGG + Chr8:88081789-88081808 MsG0880047559.01.T01:intron 20.0%
!! TCTCTTGTAATGATTAATAA+AGG - Chr8:88084129-88084148 None:intergenic 20.0%
!! TTAAAGTTGCAATCAATATT+GGG + Chr8:88084082-88084101 MsG0880047559.01.T01:intron 20.0%
!! TTCAGAATATTATAACAACA+TGG - Chr8:88082828-88082847 None:intergenic 20.0%
!! TTTCAGAATATTTAACAACA+TGG - Chr8:88083228-88083247 None:intergenic 20.0%
!!! AAAGAGTATTTTTTTAGAGA+AGG - Chr8:88082885-88082904 None:intergenic 20.0%
!!! AAAGAGTATTTTTTTAGAGA+GGG - Chr8:88082885-88082904 None:intergenic 20.0%
!!! AACTTTTATAAATTGTGTGA+AGG - Chr8:88084616-88084635 None:intergenic 20.0%
!!! AAGTATTGTGTATATATTGT+AGG + Chr8:88082067-88082086 MsG0880047559.01.T01:intron 20.0%
!!! ATACAAAATCCTTTTCATTT+GGG + Chr8:88082731-88082750 MsG0880047559.01.T01:intron 20.0%
!!! CACTTAATCTAGAATTTTTT+AGG - Chr8:88080721-88080740 None:intergenic 20.0%
!!! GAACTTTTATAATTGTGTAA+AGG - Chr8:88084771-88084790 None:intergenic 20.0%
!!! TATACAAAATCCTTTTCATT+TGG + Chr8:88082730-88082749 MsG0880047559.01.T01:intron 20.0%
! AACCTGTTCAATAATAAATC+AGG - Chr8:88081341-88081360 None:intergenic 25.0%
! AGATTAAGTCAAAAAACCAT+TGG - Chr8:88081898-88081917 None:intergenic 25.0%
! ATTTGGTTAAGTTATGAATG+TGG + Chr8:88079505-88079524 MsG0880047559.01.T01:intron 25.0%
! CTCCATAAACTTATCTTAAT+AGG + Chr8:88081788-88081807 MsG0880047559.01.T01:intron 25.0%
! GTTAAAGTTGCAATCAATAT+TGG + Chr8:88084081-88084100 MsG0880047559.01.T01:intron 25.0%
! TACCTGATTTATTATTGAAC+AGG + Chr8:88081336-88081355 MsG0880047559.01.T01:intron 25.0%
! TATAAGCTTATAGGTCTAAA+GGG - Chr8:88081728-88081747 None:intergenic 25.0%
! TCCCTATTAAGATAAGTTTA+TGG - Chr8:88081793-88081812 None:intergenic 25.0%
! TGTTATGATGTTTAGATGTT+TGG - Chr8:88080619-88080638 None:intergenic 25.0%
! TTAGACCTATAAGCTTATAA+GGG + Chr8:88081729-88081748 MsG0880047559.01.T01:intron 25.0%
! TTATAAGCTTATAGGTCTAA+AGG - Chr8:88081729-88081748 None:intergenic 25.0%
! TTTAGACCTATAAGCTTATA+AGG + Chr8:88081728-88081747 MsG0880047559.01.T01:intron 25.0%
!! AATAATAATTTGCCGTAAAG+AGG + Chr8:88082575-88082594 MsG0880047559.01.T01:intron 25.0%
!! AGATAGGTTATGATACTTTT+GGG + Chr8:88079176-88079195 MsG0880047559.01.T01:intron 25.0%
!! ATTTTTCTTTCCCTAAATAG+AGG - Chr8:88084583-88084602 None:intergenic 25.0%
!! TAATCCAAATTGTGTCTTTT+GGG + Chr8:88081833-88081852 MsG0880047559.01.T01:intron 25.0%
!! TACAAAATCCTTTTCATTTG+GGG + Chr8:88082732-88082751 MsG0880047559.01.T01:intron 25.0%
!! TAGATAGGTTATGATACTTT+TGG + Chr8:88079175-88079194 MsG0880047559.01.T01:intron 25.0%
!! TCTGACTATGAAAAAGTTTT+AGG - Chr8:88082125-88082144 None:intergenic 25.0%
!! TTGTTTTCTTTCCTAAATAG+AGG - Chr8:88084738-88084757 None:intergenic 25.0%
!!! ATTTGAAGTTGAAGGAATTT+TGG + Chr8:88080808-88080827 MsG0880047559.01.T01:intron 25.0%
!!! GAAAGAGTATTTTTTAGAGA+AGG - Chr8:88083687-88083706 None:intergenic 25.0%
!!! GAAAGAGTATTTTTTTAGAG+AGG - Chr8:88082886-88082905 None:intergenic 25.0%
!!! GCTTTTTCATTAAGCTTATA+AGG + Chr8:88081751-88081770 MsG0880047559.01.T01:intron 25.0%
AAAAGCCCTTATAAGCTTAT+AGG - Chr8:88081737-88081756 None:intergenic 30.0%
AAGAAATAGAGGAATTTGAG+AGG + Chr8:88082677-88082696 MsG0880047559.01.T01:intron 30.0%
AAGCTCTCACTTAATTATGT+TGG - Chr8:88080759-88080778 None:intergenic 30.0%
AATTATCCAAGATTGATGGA+GGG + Chr8:88084475-88084494 MsG0880047559.01.T01:three_prime_UTR 30.0%
AATTATGCTCTTTACCCAAA+TGG - Chr8:88079826-88079845 None:intergenic 30.0%
AATTTCAAATCACCTTGCTA+GGG + Chr8:88081230-88081249 MsG0880047559.01.T01:intron 30.0%
ACAAAGATATGTCATCTACA+AGG + Chr8:88082510-88082529 MsG0880047559.01.T01:intron 30.0%
AGCAAATCTAATGAACCTAT+AGG - Chr8:88082992-88083011 None:intergenic 30.0%
ATCCGATAAACTTCTTAAAC+TGG + Chr8:88079478-88079497 MsG0880047559.01.T01:intron 30.0%
ATCTTAGCAAGTTGTTGATA+GGG - Chr8:88081457-88081476 None:intergenic 30.0%
GAGAATGAGCAAAACAATTT+GGG - Chr8:88079951-88079970 None:intergenic 30.0%
GATAATTCTTCACTTACTCT+TGG + Chr8:88082243-88082262 MsG0880047559.01.T01:intron 30.0%
GCAATATGGACATTTACTTT+GGG + Chr8:88080977-88080996 MsG0880047559.01.T01:CDS 30.0%
GTCCAAATTTCACAAATTCA+CGG - Chr8:88079377-88079396 None:intergenic 30.0%
TACCGTGAATTTGTGAAATT+TGG + Chr8:88079372-88079391 MsG0880047559.01.T01:intron 30.0%
TATGAATGTGGTGTGATTAT+GGG + Chr8:88079517-88079536 MsG0880047559.01.T01:intron 30.0%
TATGTTAACTCACGTTACTT+AGG - Chr8:88079730-88079749 None:intergenic 30.0%
TCCATCAATCTTGGATAATT+GGG - Chr8:88084475-88084494 None:intergenic 30.0%
TGAGAATGAGCAAAACAATT+TGG - Chr8:88079952-88079971 None:intergenic 30.0%
TGTACATGAAAAACTAACTC+AGG - Chr8:88084539-88084558 None:intergenic 30.0%
TTATGAATGTGGTGTGATTA+TGG + Chr8:88079516-88079535 MsG0880047559.01.T01:intron 30.0%
TTTGTGAATAACATGGTACT+CGG + Chr8:88081942-88081961 MsG0880047559.01.T01:intron 30.0%
! AAACCTTTTAATCAAGCCAA+AGG - Chr8:88084224-88084243 None:intergenic 30.0%
! AAATAGAGGACTTTGGAAAA+AGG + Chr8:88082640-88082659 MsG0880047559.01.T01:intron 30.0%
! AATAGAGGACTTTGGAAAAA+GGG + Chr8:88082641-88082660 MsG0880047559.01.T01:intron 30.0%
! AATATCTTTTTACCCTCTTG+AGG + Chr8:88080535-88080554 MsG0880047559.01.T01:intron 30.0%
! AGCTTACTTGTTCTTGTTAT+TGG + Chr8:88080774-88080793 MsG0880047559.01.T01:intron 30.0%
! AGCTTATAAGGACTTTTTGA+TGG + Chr8:88081763-88081782 MsG0880047559.01.T01:intron 30.0%
! ATCTTCTGTAGTTTTTCTGT+CGG + Chr8:88081914-88081933 MsG0880047559.01.T01:intron 30.0%
! ATTAAAAGGTTTTTGCCACA+AGG + Chr8:88084232-88084251 MsG0880047559.01.T01:CDS 30.0%
! CTAATCCAAATTGTGTCTTT+TGG + Chr8:88081832-88081851 MsG0880047559.01.T01:intron 30.0%
! CTTGGTAAATTTTCACTTTC+AGG + Chr8:88084275-88084294 MsG0880047559.01.T01:intron 30.0%
! GCTTATAAGGACTTTTTGAT+GGG + Chr8:88081764-88081783 MsG0880047559.01.T01:intron 30.0%
! TACACAATACTTTTGCATGA+TGG - Chr8:88082059-88082078 None:intergenic 30.0%
! TGTGTATGCATTTTGTGATT+AGG + Chr8:88084324-88084343 MsG0880047559.01.T01:intron 30.0%
! TTTTAATCAAGCCAAAGGAT+TGG - Chr8:88084219-88084238 None:intergenic 30.0%
!! AATCCTTTGGCTTGATTAAA+AGG + Chr8:88084218-88084237 MsG0880047559.01.T01:CDS 30.0%
!! ATCTCTTGCTTTGACTTTTT+CGG - Chr8:88079108-88079127 None:intergenic 30.0%
!! GCAATTTGGTCTTTTACTTT+GGG + Chr8:88079789-88079808 MsG0880047559.01.T01:intron 30.0%
!! GGGTATTTTTGTGAATAACA+TGG + Chr8:88081935-88081954 MsG0880047559.01.T01:intron 30.0%
!! GTTGTTTGATTTGAAGTTGA+AGG + Chr8:88080800-88080819 MsG0880047559.01.T01:intron 30.0%
!! TGGATTAGCTTCAAACTTAT+AGG - Chr8:88081820-88081839 None:intergenic 30.0%
!!! GTGGTTTACTTTTAGAATGT+AGG + Chr8:88082420-88082439 MsG0880047559.01.T01:intron 30.0%
!!! TATTGGAGGAGGATTTTTTA+GGG + Chr8:88082767-88082786 MsG0880047559.01.T01:intron 30.0%
AAACCTAGTTATACCCAAGA+CGG + Chr8:88081481-88081500 MsG0880047559.01.T01:CDS 35.0%
AAGCAACAAACTTGAAGGAA+AGG + Chr8:88083064-88083083 MsG0880047559.01.T01:intron 35.0%
AAGGTTAATTAGGAGCAGAT+TGG - Chr8:88082374-88082393 None:intergenic 35.0%
AATTCTGCTCTTTACCCAAA+CGG - Chr8:88079953-88079934 None:intergenic 35.0%
ACCCAATTATCCAAGATTGA+TGG + Chr8:88084471-88084490 MsG0880047559.01.T01:three_prime_UTR 35.0%
ACTCAAAATTGTATTGGAGG+AGG + Chr8:88082756-88082775 MsG0880047559.01.T01:intron 35.0%
AGCAACAAACTTGAAGGAAA+GGG + Chr8:88083065-88083084 MsG0880047559.01.T01:intron 35.0%
AGCCAACCATAAGGTTAATT+AGG - Chr8:88082384-88082403 None:intergenic 35.0%
ATAGGATTGTGCTCATTTGT+TGG - Chr8:88079072-88079091 None:intergenic 35.0%
ATCGGTCACCAAAAATATGT+CGG - Chr8:88079240-88079259 None:intergenic 35.0%
ATTATGCACTATCACTAGTC+TGG + Chr8:88079151-88079170 MsG0880047559.01.T01:CDS 35.0%
ATTTGTCAGATACCAGCATT+TGG + Chr8:88084187-88084206 MsG0880047559.01.T01:intron 35.0%
CAATTATCCAAGATTGATGG+AGG + Chr8:88084474-88084493 MsG0880047559.01.T01:three_prime_UTR 35.0%
CAATTTCAAATCACCTTGCT+AGG + Chr8:88081229-88081248 MsG0880047559.01.T01:intron 35.0%
CAGATCTTCATAAGCACTTA+TGG + Chr8:88081586-88081605 MsG0880047559.01.T01:intron 35.0%
CATCTTAGCAAGTTGTTGAT+AGG - Chr8:88081458-88081477 None:intergenic 35.0%
CCATAAAGCAACAAACTTGA+AGG + Chr8:88083059-88083078 MsG0880047559.01.T01:intron 35.0%
CCTAGTGACTAATCTCAAAA+TGG + Chr8:88083142-88083161 MsG0880047559.01.T01:intron 35.0%
CGCCAGTTTAAGAAGTTTAT+CGG - Chr8:88079483-88079502 None:intergenic 35.0%
CTCCATCAATCTTGGATAAT+TGG - Chr8:88084476-88084495 None:intergenic 35.0%
CTCCTAATTAACCTTATGGT+TGG + Chr8:88082379-88082398 MsG0880047559.01.T01:intron 35.0%
CTTCTTAAACTGGCGTAATT+TGG + Chr8:88079488-88079507 MsG0880047559.01.T01:intron 35.0%
GATACCACTTCAAAGAATGT+AGG + Chr8:88082480-88082499 MsG0880047559.01.T01:intron 35.0%
GATATGTCATCTACAAGGTT+TGG + Chr8:88082515-88082534 MsG0880047559.01.T01:intron 35.0%
GGAACTCAAAATTGTATTGG+AGG + Chr8:88082753-88082772 MsG0880047559.01.T01:intron 35.0%
GGCAATATGGACATTTACTT+TGG + Chr8:88080976-88080995 MsG0880047559.01.T01:CDS 35.0%
GGGAAAATAATAAGCTAGAG+AGG - Chr8:88081437-88081456 None:intergenic 35.0%
GTAATCTGTACAATCAACTG+TGG + Chr8:88084008-88084027 MsG0880047559.01.T01:intron 35.0%
GTATCTGACAAATGTCATGA+AGG - Chr8:88084180-88084199 None:intergenic 35.0%
GTCTAAAGGGATGAGTTAAA+CGG - Chr8:88081715-88081734 None:intergenic 35.0%
GTTCTGGTACATATATCTTG+TGG + Chr8:88082342-88082361 MsG0880047559.01.T01:CDS 35.0%
TAAATCACGCTTGTGTTAAG+TGG + Chr8:88080084-88080103 MsG0880047559.01.T01:intron 35.0%
TACAAAAACCAGAGAAGACA+AGG - Chr8:88081566-88081585 None:intergenic 35.0%
TCACACATAAACGATCCAAA+CGG - Chr8:88079399-88079418 None:intergenic 35.0%
TCTAAAGGGATGAGTTAAAC+GGG - Chr8:88081714-88081733 None:intergenic 35.0%
TCTGCTCCTAATTAACCTTA+TGG + Chr8:88082375-88082394 MsG0880047559.01.T01:intron 35.0%
TGAGCACAATCCTATTACTT+TGG + Chr8:88079077-88079096 MsG0880047559.01.T01:CDS 35.0%
TGATCCCAAAAGACACAATT+TGG - Chr8:88081840-88081859 None:intergenic 35.0%
TGGGGAACTCAAAATTGTAT+TGG + Chr8:88082750-88082769 MsG0880047559.01.T01:intron 35.0%
TTCTTGTGCTCCTCTATTTA+GGG + Chr8:88084570-88084589 MsG0880047559.01.T01:three_prime_UTR 35.0%
TTTCTTGTGCTCCTCTATTT+AGG + Chr8:88084569-88084588 MsG0880047559.01.T01:three_prime_UTR 35.0%
TTTGAAAATGAGGCAGAATG+AGG + Chr8:88080874-88080893 MsG0880047559.01.T01:intron 35.0%
TTTGCTTATTAGTGCATGTC+TGG + Chr8:88083006-88083025 MsG0880047559.01.T01:intron 35.0%
TTTGTGAAATTTGGACCGTT+TGG + Chr8:88079381-88079400 MsG0880047559.01.T01:intron 35.0%
! AAATAGAGGAGCACAAGAAA+AGG - Chr8:88084569-88084588 None:intergenic 35.0%
! CACATGCATCGATAATTTCA+TGG - Chr8:88081264-88081283 None:intergenic 35.0%
! GCATCGATAATTTCATGGAT+AGG - Chr8:88081259-88081278 None:intergenic 35.0%
! TAAGCCTACATTCTTTGAAG+TGG - Chr8:88082487-88082506 None:intergenic 35.0%
! TATCACTAGTCTGGTTAGAT+AGG + Chr8:88079160-88079179 MsG0880047559.01.T01:intron 35.0%
! TCTTCTGTAGTTTTTCTGTC+GGG + Chr8:88081915-88081934 MsG0880047559.01.T01:intron 35.0%
! TTACTACCCCGACATATTTT+TGG + Chr8:88079229-88079248 MsG0880047559.01.T01:intron 35.0%
! TTTGAGTTCCCCAAATGAAA+AGG - Chr8:88082743-88082762 None:intergenic 35.0%
!! AAGTTGAAGGAATTTTGGAG+TGG + Chr8:88080813-88080832 MsG0880047559.01.T01:intron 35.0%
!! AGGTTATGATACTTTTGGGT+CGG + Chr8:88079180-88079199 MsG0880047559.01.T01:intron 35.0%
!! ATGAACCTATAGGCTTTGTT+TGG - Chr8:88082982-88083001 None:intergenic 35.0%
!! CCTTCAAGTTTGTTGCTTTA+TGG - Chr8:88083062-88083081 None:intergenic 35.0%
!! CTATCAACAACTTGCTAAGA+TGG + Chr8:88081456-88081475 MsG0880047559.01.T01:CDS 35.0%
!! GAGAGTGTTGTTTGAAAATG+AGG + Chr8:88080864-88080883 MsG0880047559.01.T01:intron 35.0%
!! GGCAATTTGGTCTTTTACTT+TGG + Chr8:88079788-88079807 MsG0880047559.01.T01:intron 35.0%
!! TCATTTGTTGGTTTCTTTGG+CGG - Chr8:88079060-88079079 None:intergenic 35.0%
!! TGAACCTATAGGCTTTGTTT+GGG - Chr8:88082981-88083000 None:intergenic 35.0%
!! TGCTCATTTGTTGGTTTCTT+TGG - Chr8:88079063-88079082 None:intergenic 35.0%
!! TTCTTTGAAGTGGTATCAGT+CGG - Chr8:88082477-88082496 None:intergenic 35.0%
!! TTTCAAATAAGAGTGTTCCC+TGG - Chr8:88082161-88082180 None:intergenic 35.0%
!!! AAAAAGTTTTAGGCTCATCC+CGG - Chr8:88082115-88082134 None:intergenic 35.0%
!!! AGGAGGATTTTTTAGGGTTT+TGG + Chr8:88082773-88082792 MsG0880047559.01.T01:intron 35.0%
!!! AGGATTTTTTAGGGTTTTGG+GGG + Chr8:88082776-88082795 MsG0880047559.01.T01:intron 35.0%
!!! AGTTGAAGGAATTTTGGAGT+GGG + Chr8:88080814-88080833 MsG0880047559.01.T01:intron 35.0%
!!! CCATTTTGAGATTAGTCACT+AGG - Chr8:88083145-88083164 None:intergenic 35.0%
!!! GAGGATTTTTTAGGGTTTTG+GGG + Chr8:88082775-88082794 MsG0880047559.01.T01:intron 35.0%
!!! GGAGGATTTTTTAGGGTTTT+GGG + Chr8:88082774-88082793 MsG0880047559.01.T01:intron 35.0%
!!! GTATTGGAGGAGGATTTTTT+AGG + Chr8:88082766-88082785 MsG0880047559.01.T01:intron 35.0%
AAACTTGAAGGAAAGGGGAT+TGG + Chr8:88083471-88083490 MsG0880047559.01.T01:intron 40.0%
AACTCCCAAACAAAGCCTAT+AGG + Chr8:88082974-88082993 MsG0880047559.01.T01:intron 40.0%
AAGGGAAAAGATGGAGAAGA+AGG + Chr8:88084378-88084397 MsG0880047559.01.T01:CDS 40.0%
AATTGGGTGATATGTGCAAC+TGG - Chr8:88084459-88084478 None:intergenic 40.0%
AGGGTTTGAATACCTCAAGA+GGG - Chr8:88080550-88080569 None:intergenic 40.0%
ATAGAGGAATTTGAGAGGTG+AGG + Chr8:88082682-88082701 MsG0880047559.01.T01:intron 40.0%
ATATTGTAGGCTGTAGCCTA+TGG + Chr8:88082080-88082099 MsG0880047559.01.T01:intron 40.0%
ATCTAAAAGCTCACCGTCTT+GGG - Chr8:88081497-88081516 None:intergenic 40.0%
ATGAAAAGACCCGCAAGAAA+AGG + Chr8:88084359-88084378 MsG0880047559.01.T01:CDS 40.0%
ATTGGGTGATATGTGCAACT+GGG - Chr8:88084458-88084477 None:intergenic 40.0%
CAAACTTGAAGGAAAGGGAT+TGG + Chr8:88083070-88083089 MsG0880047559.01.T01:intron 40.0%
CCCTAGATAACTCCTCTTTA+CGG - Chr8:88082590-88082609 None:intergenic 40.0%
CCGTAAAGAGGAGTTATCTA+GGG + Chr8:88082587-88082606 MsG0880047559.01.T01:intron 40.0%
CTGTACAATCAACTGTGGTT+GGG + Chr8:88084013-88084032 MsG0880047559.01.T01:intron 40.0%
GAAGTTACTATGAACCTCTG+TGG - Chr8:88084301-88084320 None:intergenic 40.0%
GCAACAAACTTGAAGGAAAG+GGG + Chr8:88083066-88083085 MsG0880047559.01.T01:intron 40.0%
GCTCTATTAGCACAAAACTG+TGG + Chr8:88082401-88082420 MsG0880047559.01.T01:intron 40.0%
GGGAATGAGCAAAACCATTT+GGG + Chr8:88079809-88079828 MsG0880047559.01.T01:intron 40.0%
GGGTAAAGAGCAGAATTCTT+CGG + Chr8:88081017-88081036 MsG0880047559.01.T01:CDS 40.0%
GGGTCCAACTAAGATCTATT+GGG + Chr8:88079864-88079883 MsG0880047559.01.T01:intron 40.0%
GTAAAACCCTCCATCAATCT+TGG - Chr8:88084484-88084503 None:intergenic 40.0%
GTAAAGAGCAGAATTCACAC+CGG - Chr8:88079929-88079948 None:intergenic 40.0%
GTGGAAGAAATAGAGGACTT+TGG + Chr8:88082633-88082652 MsG0880047559.01.T01:intron 40.0%
GTTCGTGTCTTGACAAACTT+AGG - Chr8:88084412-88084431 None:intergenic 40.0%
TAAGTCACACTTGTGTTGAG+TGG + Chr8:88080115-88080134 MsG0880047559.01.T01:intron 40.0%
TAGAGGAATTTGAGAGGTGA+GGG + Chr8:88082683-88082702 MsG0880047559.01.T01:intron 40.0%
TAGGGTTTGAATACCTCAAG+AGG - Chr8:88080551-88080570 None:intergenic 40.0%
TCATAGTCAGATAATCCCGT+AGG + Chr8:88082134-88082153 MsG0880047559.01.T01:intron 40.0%
TCGGTCACCAAAAATATGTC+GGG - Chr8:88079239-88079258 None:intergenic 40.0%
TCTGTACAATCAACTGTGGT+TGG + Chr8:88084012-88084031 MsG0880047559.01.T01:intron 40.0%
TGAAAAGACCCGCAAGAAAA+GGG + Chr8:88084360-88084379 MsG0880047559.01.T01:CDS 40.0%
TGCTAATAGAGCCAACCATA+AGG - Chr8:88082393-88082412 None:intergenic 40.0%
TGGGAATGAGCAAAACCATT+TGG + Chr8:88079808-88079827 MsG0880047559.01.T01:intron 40.0%
TGGGTCCAACTAAGATCTAT+TGG + Chr8:88079863-88079882 MsG0880047559.01.T01:intron 40.0%
TGGTAGTTTATCTGTGCCAA+TGG + Chr8:88081879-88081898 MsG0880047559.01.T01:intron 40.0%
TGTCTTGACAAACTTAGGTC+TGG - Chr8:88084407-88084426 None:intergenic 40.0%
! ACACGAACTAGATAGTTTGC+TGG + Chr8:88084424-88084443 MsG0880047559.01.T01:exon 40.0%
! ACGTTGTTTGGTGAGAGAAA+TGG + Chr8:88081100-88081119 MsG0880047559.01.T01:intron 40.0%
! CATCTTTTCCCTTTTCTTGC+GGG - Chr8:88084371-88084390 None:intergenic 40.0%
! CATTTGAGATTAGTCACTGG+GGG - Chr8:88083948-88083967 None:intergenic 40.0%
! CCATCTTTTCCCTTTTCTTG+CGG - Chr8:88084372-88084391 None:intergenic 40.0%
! CCATTTGAGATTAGTCACTG+GGG - Chr8:88083949-88083968 None:intergenic 40.0%
! GCCATTTGAGATTAGTCACT+GGG - Chr8:88083950-88083969 None:intergenic 40.0%
! TAGCCTATGGAATTTTCTCC+CGG + Chr8:88082093-88082112 MsG0880047559.01.T01:intron 40.0%
! TATCTAGGGCTCTGGTAAAA+AGG + Chr8:88082601-88082620 MsG0880047559.01.T01:intron 40.0%
! TTCGGAGTGTCCAAAGTAAT+AGG - Chr8:88079090-88079109 None:intergenic 40.0%
! TTTGGAGCATACCAATCCTT+TGG + Chr8:88084205-88084224 MsG0880047559.01.T01:CDS 40.0%
!! ATAGGCTTTGTTTGGGAGTT+TGG - Chr8:88082974-88082993 None:intergenic 40.0%
!! GGTTTTGATATGACTACTGG+TGG + Chr8:88081520-88081539 MsG0880047559.01.T01:CDS 40.0%
!! TATGATACTTTTGGGTCGGT+CGG + Chr8:88079184-88079203 MsG0880047559.01.T01:intron 40.0%
!!! AAAAGTTTTAGGCTCATCCC+GGG - Chr8:88082114-88082133 None:intergenic 40.0%
!!! CGGTGTTCGCTATTTTTTTG+TGG + Chr8:88079204-88079223 MsG0880047559.01.T01:intron 40.0%
!!! GGATTTTTTAGGGTTTTGGG+GGG + Chr8:88082777-88082796 MsG0880047559.01.T01:intron 40.0%
!!! GGTGGTTTTGATATGACTAC+TGG + Chr8:88081517-88081536 MsG0880047559.01.T01:CDS 40.0%
!!! TAAGTCACGTAAGGGCATTT+TGG - Chr8:88079985-88080004 None:intergenic 40.0%
AAGGGATTGGATCGCTAAAC+AGG + Chr8:88083083-88083102 MsG0880047559.01.T01:intron 45.0%
AGCACAAGTTAAGTCACGCA+GGG + Chr8:88080954-88080973 MsG0880047559.01.T01:intron 45.0%
AGCGTGACTTAACATGCGTA+GGG + Chr8:88079766-88079785 MsG0880047559.01.T01:intron 45.0%
AGCGTGACTTAAGTCACGTA+AGG - Chr8:88079994-88080013 None:intergenic 45.0%
AGGGGATTGGATCACTAAAC+AGG + Chr8:88083885-88083904 MsG0880047559.01.T01:intron 45.0%
ATCCCGGGAGAAAATTCCAT+AGG - Chr8:88082099-88082118 None:intergenic 45.0%
ATGACTACTGGTGGAGTTTG+CGG + Chr8:88081529-88081548 MsG0880047559.01.T01:CDS 45.0%
ATGGATAGGAAACCCTAGCA+AGG - Chr8:88081245-88081264 None:intergenic 45.0%
CACACCGGAACATTCACAAT+GGG - Chr8:88079914-88079933 None:intergenic 45.0%
CATCTAAAAGCTCACCGTCT+TGG - Chr8:88081498-88081517 None:intergenic 45.0%
CCAGAACTTTCCAGAGATGA+TGG - Chr8:88082329-88082348 None:intergenic 45.0%
CCCCAGTGACTAATCTCAAA+TGG + Chr8:88083946-88083965 MsG0880047559.01.T01:intron 45.0%
CCGCAAGAAAAGGGAAAAGA+TGG + Chr8:88084369-88084388 MsG0880047559.01.T01:CDS 45.0%
CGAGCCCAATAGATCTTAGT+TGG - Chr8:88079871-88079890 None:intergenic 45.0%
CGGTCACCAAAAATATGTCG+GGG - Chr8:88079238-88079257 None:intergenic 45.0%
CTCATAGTCCAAGTATCCAG+AGG - Chr8:88084653-88084672 None:intergenic 45.0%
CTCTCACCAAACAACGTTAC+CGG - Chr8:88081097-88081116 None:intergenic 45.0%
GATTGGTATGCTCCAAATGC+TGG - Chr8:88084202-88084221 None:intergenic 45.0%
GCCGTAAAGAGGAGTTATCT+AGG + Chr8:88082586-88082605 MsG0880047559.01.T01:intron 45.0%
GCGTGACTTAAGTCACGTAA+GGG - Chr8:88079993-88080012 None:intergenic 45.0%
GGAGCAAGTGGAAGAAATAG+AGG + Chr8:88082626-88082645 MsG0880047559.01.T01:intron 45.0%
GGATTGGATCACTAAACAGG+AGG + Chr8:88083888-88083907 MsG0880047559.01.T01:intron 45.0%
GGTAAAAAGGAAGGAGCAAG+TGG + Chr8:88082614-88082633 MsG0880047559.01.T01:intron 45.0%
GTGAGAGAAATGGCGAATCA+AGG + Chr8:88081110-88081129 MsG0880047559.01.T01:intron 45.0%
TAACATGCGTAGGGGCAATT+TGG + Chr8:88079775-88079794 MsG0880047559.01.T01:intron 45.0%
TAGCACAAGTTAAGTCACGC+AGG + Chr8:88080953-88080972 MsG0880047559.01.T01:intron 45.0%
TAGCACATCCTTCACTGACA+CGG + Chr8:88084149-88084168 MsG0880047559.01.T01:intron 45.0%
TAGCGTGACTTAACATGCGT+AGG + Chr8:88079765-88079784 MsG0880047559.01.T01:intron 45.0%
TCACACCGGAACATTCACAA+TGG - Chr8:88079915-88079934 None:intergenic 45.0%
TCACCGTCTTGGGTATAACT+AGG - Chr8:88081487-88081506 None:intergenic 45.0%
TGAGCCCATTGTGAATGTTC+CGG + Chr8:88079907-88079926 MsG0880047559.01.T01:intron 45.0%
TTAACCCACGCTAGTGCAAA+TGG + Chr8:88079618-88079637 MsG0880047559.01.T01:intron 45.0%
TTGGATCACTAAACAGGAGG+AGG + Chr8:88083891-88083910 MsG0880047559.01.T01:intron 45.0%
TTTGGGGGGTGGGAAATATA+GGG - Chr8:88083336-88083355 None:intergenic 45.0%
! AGAGAAAGAGAGTACGTTGC+AGG - Chr8:88081198-88081217 None:intergenic 45.0%
! AGCCTATGGAATTTTCTCCC+GGG + Chr8:88082094-88082113 MsG0880047559.01.T01:intron 45.0%
! CAAGACGGTGAGCTTTTAGA+TGG + Chr8:88081496-88081515 MsG0880047559.01.T01:CDS 45.0%
! CAGAGGTATGGTCAACATCT+TGG + Chr8:88084257-88084276 MsG0880047559.01.T01:intron 45.0%
! CCATCATCTCTGGAAAGTTC+TGG + Chr8:88082326-88082345 MsG0880047559.01.T01:CDS 45.0%
! CGCCATTTGAGATTAGTCAC+TGG - Chr8:88083951-88083970 None:intergenic 45.0%
! CTTTGGGGGTGGGAAATATA+GGG - Chr8:88082936-88082955 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - Chr8:88082969-88082988 None:intergenic 45.0%
! GAGGACTTTGGAAAAAGGGA+AGG + Chr8:88082645-88082664 MsG0880047559.01.T01:intron 45.0%
! GTTTTTGCCACAAGGTTCAG+AGG + Chr8:88084240-88084259 MsG0880047559.01.T01:CDS 45.0%
! TAGGGCTCTGGTAAAAAGGA+AGG + Chr8:88082605-88082624 MsG0880047559.01.T01:intron 45.0%
! TCAAGGTGCTAAGAAACGCA+AGG + Chr8:88081127-88081146 MsG0880047559.01.T01:intron 45.0%
! TTTTCACTTTCAGGCCACAG+AGG + Chr8:88084284-88084303 MsG0880047559.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr8:88082970-88082989 None:intergenic 45.0%
!! TCTTCCATTCTAGCTTCACC+TGG + Chr8:88081386-88081405 MsG0880047559.01.T01:CDS 45.0%
!! TTCACCTGGAAGCATTGGAT+TGG + Chr8:88081400-88081419 MsG0880047559.01.T01:CDS 45.0%
!! TTCTTGTAAGGACTAGCCTC+TGG + Chr8:88084634-88084653 MsG0880047559.01.T01:three_prime_UTR 45.0%
AGGGGATTGGATCGCTAAAC+AGG + Chr8:88083484-88083503 MsG0880047559.01.T01:intron 50.0%
CAAGCCAATCCAATGCTTCC+AGG - Chr8:88081407-88081426 None:intergenic 50.0%
CAAGTCGCTTCCATCATCTC+TGG + Chr8:88082316-88082335 MsG0880047559.01.T01:CDS 50.0%
CAGATAATCCCGTAGGTCCA+GGG + Chr8:88082141-88082160 MsG0880047559.01.T01:intron 50.0%
GACCATACCTCTGAACCTTG+TGG - Chr8:88084250-88084269 None:intergenic 50.0%
GCACAAGTTAAGTCACGCAG+GGG + Chr8:88080955-88080974 MsG0880047559.01.T01:intron 50.0%
GCGTGACTTAACATGCGTAG+GGG + Chr8:88079767-88079786 MsG0880047559.01.T01:intron 50.0%
GCTTCCAGGTGAAGCTAGAA+TGG - Chr8:88081393-88081412 None:intergenic 50.0%
GGAAAAAGGGAAGGAGCAAG+TGG + Chr8:88082654-88082673 MsG0880047559.01.T01:intron 50.0%
GGATTGGATCGCTAAACAGG+AGG + Chr8:88083086-88083105 MsG0880047559.01.T01:intron 50.0%
GGGAATGAGCAGAACCGTTT+GGG + Chr8:88080997-88081016 MsG0880047559.01.T01:CDS 50.0%
TAAGTCACGCAGGGGCAATA+TGG + Chr8:88080963-88080982 MsG0880047559.01.T01:intron 50.0%
TCACCAAACAACGTTACCGG+TGG - Chr8:88081094-88081113 None:intergenic 50.0%
TCAGATAATCCCGTAGGTCC+AGG + Chr8:88082140-88082159 MsG0880047559.01.T01:intron 50.0%
TGACTACTGGTGGAGTTTGC+GGG + Chr8:88081530-88081549 MsG0880047559.01.T01:CDS 50.0%
TGCCACAAGGTTCAGAGGTA+TGG + Chr8:88084245-88084264 MsG0880047559.01.T01:intron 50.0%
TGGGAATGAGCAGAACCGTT+TGG + Chr8:88080996-88081015 MsG0880047559.01.T01:CDS 50.0%
TTGGATCGCTAAACAGGAGG+AGG + Chr8:88083089-88083108 MsG0880047559.01.T01:intron 50.0%
TTGTGTTGAGTGGCGCATAG+TGG + Chr8:88080125-88080144 MsG0880047559.01.T01:intron 50.0%
TTTGAGAGGTGAGGGCTTCA+CGG + Chr8:88082691-88082710 MsG0880047559.01.T01:intron 50.0%
! AGAGGAGTTATCTAGGGCTC+TGG + Chr8:88082593-88082612 MsG0880047559.01.T01:intron 50.0%
! CTAGCTTCACCTGGAAGCAT+TGG + Chr8:88081395-88081414 MsG0880047559.01.T01:CDS 50.0%
! CTTTGGGGGGTGGGAAATAT+AGG - Chr8:88083337-88083356 None:intergenic 50.0%
! GACGGTGAGCTTTTAGATGG+TGG + Chr8:88081499-88081518 MsG0880047559.01.T01:CDS 50.0%
! GTTGCCATTTGCACTAGCGT+GGG - Chr8:88079625-88079644 None:intergenic 50.0%
! GTTGGTTTCTTTGGCGGCTT+CGG - Chr8:88079054-88079073 None:intergenic 50.0%
!! AAGAGTGTTCCCTGGACCTA+CGG - Chr8:88082153-88082172 None:intergenic 50.0%
!! AGGACTAGCCTCTGGATACT+TGG + Chr8:88084642-88084661 MsG0880047559.01.T01:three_prime_UTR 50.0%
!! CTGGAAGCATTGGATTGGCT+TGG + Chr8:88081405-88081424 MsG0880047559.01.T01:CDS 50.0%
!! GCTTTGGGGGTGGGAAATAT+AGG - Chr8:88082937-88082956 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr8:88082971-88082990 None:intergenic 50.0%
AGGAGCAACCGTGTCAGTGA+AGG - Chr8:88084160-88084179 None:intergenic 55.0%
CGACTCTGCCTTGTCTTCTC+TGG + Chr8:88081555-88081574 MsG0880047559.01.T01:intron 55.0%
GGCAGAATGAGGCTCTGTCT+AGG + Chr8:88080885-88080904 MsG0880047559.01.T01:intron 55.0%
TCGCCACCGGTAACGTTGTT+TGG + Chr8:88081088-88081107 MsG0880047559.01.T01:CDS 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - Chr8:88082966-88082985 None:intergenic 55.0%
TTGAGAGGTGAGGGCTTCAC+GGG + Chr8:88082692-88082711 MsG0880047559.01.T01:intron 55.0%
! AGAGTGTTCCCTGGACCTAC+GGG - Chr8:88082152-88082171 None:intergenic 55.0%
! CGTTGCAGGCGATGATGATG+TGG - Chr8:88081184-88081203 None:intergenic 55.0%
! CGTTGCCATTTGCACTAGCG+TGG - Chr8:88079626-88079645 None:intergenic 55.0%
! GATGATGATGTGGCGGAGCT+TGG - Chr8:88081174-88081193 None:intergenic 55.0%
! TGCAGGCGATGATGATGTGG+CGG - Chr8:88081181-88081200 None:intergenic 55.0%
AGCAGCGACTTCATCGCCAC+CGG + Chr8:88081075-88081094 MsG0880047559.01.T01:CDS 60.0%
GGAGTTTGGAGGGGAGGAGA+GGG - Chr8:88083360-88083379 None:intergenic 60.0%
TGGGAGTTTGGAGGGGAGGA+GGG - Chr8:88082962-88082981 None:intergenic 60.0%
TTGGGAGTTTGGAGGGGAGG+AGG - Chr8:88082963-88082982 None:intergenic 60.0%
AGGGGAGGAGGGAGGCTTTG+GGG - Chr8:88082951-88082970 None:intergenic 65.0%
GAGGGGAGGAGAGGGCTTTG+GGG - Chr8:88083352-88083371 None:intergenic 65.0%
GAGGGGAGGAGGGAGGCTTT+GGG - Chr8:88082952-88082971 None:intergenic 65.0%
GAGTTTGGAGGGGAGGAGGG+AGG - Chr8:88082959-88082978 None:intergenic 65.0%
GGAGGGGAGGAGAGGGCTTT+GGG - Chr8:88083353-88083372 None:intergenic 65.0%
GGGAGTTTGGAGGGGAGGAG+AGG - Chr8:88082961-88082980 None:intergenic 65.0%
TGGAGGGGAGGAGAGGGCTT+TGG - Chr8:88083354-88083373 None:intergenic 65.0%
! AGGGGAGGAGAGGGCTTTGG+GGG - Chr8:88083351-88083370 None:intergenic 65.0%
!! AGGAGAGGGCTTTGGGGGGT+GGG - Chr8:88083346-88083365 None:intergenic 65.0%
!! AGGAGGGAGGCTTTGGGGGT+GGG - Chr8:88082946-88082965 None:intergenic 65.0%
GGAGGGGAGGAGGGAGGCTT+TGG - Chr8:88082953-88082972 None:intergenic 70.0%
! GGGGAGGAGGGAGGCTTTGG+GGG - Chr8:88082950-88082969 None:intergenic 70.0%
!! GAGGAGAGGGCTTTGGGGGG+TGG - Chr8:88083347-88083366 None:intergenic 70.0%
!! GAGGAGGGAGGCTTTGGGGG+TGG - Chr8:88082947-88082966 None:intergenic 70.0%
!! GGGGAGGAGAGGGCTTTGGG+GGG - Chr8:88083350-88083369 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 88079039 88084810 88079039 ID=MsG0880047559.01;Name=MsG0880047559.01
Chr8 mRNA 88079039 88084810 88079039 ID=MsG0880047559.01.T01;Parent=MsG0880047559.01;Name=MsG0880047559.01.T01;_AED=0.47;_eAED=0.53;_QI=0|0.6|0.5|1|1|1|6|372|228
Chr8 exon 88079039 88079172 88079039 ID=MsG0880047559.01.T01:exon:2184;Parent=MsG0880047559.01.T01
Chr8 exon 88080975 88081109 88080975 ID=MsG0880047559.01.T01:exon:2185;Parent=MsG0880047559.01.T01
Chr8 exon 88081378 88081551 88081378 ID=MsG0880047559.01.T01:exon:2186;Parent=MsG0880047559.01.T01
Chr8 exon 88082279 88082363 88082279 ID=MsG0880047559.01.T01:exon:2187;Parent=MsG0880047559.01.T01
Chr8 exon 88084196 88084261 88084196 ID=MsG0880047559.01.T01:exon:2188;Parent=MsG0880047559.01.T01
Chr8 exon 88084346 88084810 88084346 ID=MsG0880047559.01.T01:exon:2189;Parent=MsG0880047559.01.T01
Chr8 CDS 88079039 88079172 88079039 ID=MsG0880047559.01.T01:cds;Parent=MsG0880047559.01.T01
Chr8 CDS 88080975 88081109 88080975 ID=MsG0880047559.01.T01:cds;Parent=MsG0880047559.01.T01
Chr8 CDS 88081378 88081551 88081378 ID=MsG0880047559.01.T01:cds;Parent=MsG0880047559.01.T01
Chr8 CDS 88082279 88082363 88082279 ID=MsG0880047559.01.T01:cds;Parent=MsG0880047559.01.T01
Chr8 CDS 88084196 88084261 88084196 ID=MsG0880047559.01.T01:cds;Parent=MsG0880047559.01.T01
Chr8 CDS 88084346 88084438 88084346 ID=MsG0880047559.01.T01:cds;Parent=MsG0880047559.01.T01
Chr8 three_prime_UTR 88084439 88084810 88084439 ID=MsG0880047559.01.T01:three_prime_utr;Parent=MsG0880047559.01.T01
Gene Sequence

>MsG0880047559.01.T01

ATGTCTAAGGAGCCGAAGCCGCCAAAGAAACCAACAAATGAGCACAATCCTATTACTTTGGACACTCCGAAAAAGTCAAAGCAAGAGATCGAAGTCATAGATGAAGATGAAGATTATGCACTATCACTAGTCTGGGGCAATATGGACATTTACTTTGGGAATGAGCAGAACCGTTTGGGTAAAGAGCAGAATTCTTCGGTGTTCTTTCTACGAATCAGAATCGAGAAGAAGCATAGCAGCGACTTCATCGCCACCGGTAACGTTGTTTGGATGTTAATCTTCCATTCTAGCTTCACCTGGAAGCATTGGATTGGCTTGGTTGTGACCTCTCTAGCTTATTATTTTCCCTATCAACAACTTGCTAAGATGGCAAAACCTAGTTATACCCAAGACGGTGAGCTTTTAGATGGTGGTTTTGATATGACTACTGGTGGAGTTTGCGGCTATTTACATGATGTTATCTACATAACATGCTTTGTGCAAGTCGCTTCCATCATCTCTGGAAAGTTCTGGTACATATATCTTGTGATACCAGCATTTGGAGCATACCAATCCTTTGGCTTGATTAAAAGGTTTTTGCCACAAGGTTCAGAGGAATCGTTTGAAGATGAAAAGACCCGCAAGAAAAGGGAAAAGATGGAGAAGAAGGCATCCAGACCTAAGTTTGTCAAGACACGAACTAGATAG
Protein sequence

>MsG0880047559.01.T01

MSKEPKPPKKPTNEHNPITLDTPKKSKQEIEVIDEDEDYALSLVWGNMDIYFGNEQNRLGKEQNSSVFFLRIRIEKKHSSDFIATGNVVWMLIFHSSFTWKHWIGLVVTSLAYYFPYQQLAKMAKPSYTQDGELLDGGFDMTTGGVCGYLHDVIYITCFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKRFLPQGSEESFEDEKTRKKREKMEKKASRPKFVKTRTR*