Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004674.01.T01 | RHN80876.1 | 97.097 | 310 | 9 | 0 | 1 | 310 | 1 | 310 | 0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004674.01.T01 | Q500V5 | 43.505 | 331 | 161 | 7 | 2 | 307 | 21 | 350 | 9.80E-82 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004674.01.T01 | A0A396JRG1 | 97.097 | 310 | 9 | 0 | 1 | 310 | 1 | 310 | 0.0 | 619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000275.01 | MsG0180004674.01 | 0.803027 | 4.239846e-49 | 2.108221e-46 |
| MsG0180004674.01 | MsG0480021719.01 | 0.809341 | 1.985161e-50 | 1.162563e-47 |
| MsG0180004674.01 | MsG0780035954.01 | 0.809831 | 1.557948e-50 | 9.242953e-48 |
| MsG0180004674.01 | MsG0780040076.01 | 0.803506 | 3.374263e-49 | 1.698682e-46 |
| MsG0180004674.01 | MsG0880045915.01 | 0.809948 | 1.470100e-50 | 8.748599e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004674.01.T01 | MTR_1g084210 | 62.275 | 167 | 60 | 1 | 148 | 311 | 23 | 189 | 2.99e-71 | 219 |
| MsG0180004674.01.T01 | MTR_1g084210 | 45.038 | 131 | 69 | 2 | 17 | 146 | 56 | 184 | 5.96e-33 | 120 |
| MsG0180004674.01.T01 | MTR_2g033390 | 36.474 | 329 | 172 | 6 | 17 | 311 | 67 | 392 | 2.37e-61 | 202 |
| MsG0180004674.01.T01 | MTR_2g033390 | 42.614 | 176 | 94 | 4 | 141 | 310 | 26 | 200 | 1.02e-36 | 137 |
| MsG0180004674.01.T01 | MTR_2g033390 | 34.694 | 147 | 89 | 4 | 5 | 146 | 243 | 387 | 6.65e-20 | 90.1 |
| MsG0180004674.01.T01 | MTR_4g024780 | 38.971 | 136 | 75 | 2 | 17 | 152 | 6 | 133 | 8.76e-28 | 113 |
| MsG0180004674.01.T01 | MTR_4g024780 | 30.827 | 133 | 85 | 3 | 174 | 306 | 2 | 127 | 1.10e-13 | 71.6 |
| MsG0180004674.01.T01 | MTR_4g079830 | 39.416 | 137 | 74 | 5 | 17 | 146 | 10 | 144 | 6.11e-26 | 100 |
| MsG0180004674.01.T01 | MTR_4g079830 | 36.496 | 137 | 81 | 3 | 177 | 307 | 9 | 145 | 1.04e-25 | 100 |
| MsG0180004674.01.T01 | MTR_4g023710 | 44.604 | 139 | 66 | 6 | 17 | 152 | 7 | 137 | 3.27e-25 | 105 |
| MsG0180004674.01.T01 | MTR_4g023710 | 34.848 | 132 | 79 | 3 | 176 | 306 | 5 | 130 | 1.01e-13 | 71.6 |
| MsG0180004674.01.T01 | MTR_5g089140 | 39.552 | 134 | 76 | 3 | 179 | 307 | 11 | 144 | 1.11e-24 | 97.4 |
| MsG0180004674.01.T01 | MTR_5g089140 | 33.333 | 135 | 84 | 3 | 17 | 146 | 10 | 143 | 1.39e-18 | 81.3 |
| MsG0180004674.01.T01 | MTR_7g017280 | 37.594 | 133 | 75 | 2 | 17 | 149 | 6 | 130 | 3.11e-24 | 102 |
| MsG0180004674.01.T01 | MTR_7g017280 | 30.075 | 133 | 86 | 3 | 174 | 306 | 2 | 127 | 5.49e-13 | 69.7 |
| MsG0180004674.01.T01 | MTR_5g089250 | 39.552 | 134 | 76 | 3 | 179 | 307 | 11 | 144 | 6.36e-24 | 95.5 |
| MsG0180004674.01.T01 | MTR_5g089250 | 33.333 | 135 | 84 | 3 | 17 | 146 | 10 | 143 | 2.14e-18 | 80.9 |
| MsG0180004674.01.T01 | MTR_4g024810 | 44.030 | 134 | 65 | 5 | 17 | 148 | 7 | 132 | 1.01e-23 | 101 |
| MsG0180004674.01.T01 | MTR_4g024810 | 34.848 | 132 | 79 | 4 | 176 | 306 | 5 | 130 | 1.79e-12 | 68.2 |
| MsG0180004674.01.T01 | MTR_5g089220 | 37.324 | 142 | 82 | 4 | 171 | 307 | 5 | 144 | 3.16e-23 | 93.6 |
| MsG0180004674.01.T01 | MTR_5g089220 | 34.815 | 135 | 82 | 3 | 17 | 146 | 10 | 143 | 3.72e-21 | 88.2 |
| MsG0180004674.01.T01 | MTR_4g026550 | 41.045 | 134 | 67 | 6 | 19 | 149 | 3 | 127 | 3.03e-22 | 97.1 |
| MsG0180004674.01.T01 | MTR_4g026550 | 32.812 | 128 | 79 | 3 | 180 | 306 | 3 | 124 | 3.65e-13 | 70.1 |
| MsG0180004674.01.T01 | MTR_4g079980 | 38.136 | 118 | 68 | 3 | 177 | 289 | 9 | 126 | 3.05e-19 | 83.2 |
| MsG0180004674.01.T01 | MTR_4g079980 | 31.250 | 144 | 86 | 5 | 17 | 148 | 10 | 152 | 7.45e-16 | 73.9 |
| MsG0180004674.01.T01 | MTR_4g024680 | 40.288 | 139 | 68 | 5 | 17 | 153 | 7 | 132 | 4.39e-19 | 88.2 |
| MsG0180004674.01.T01 | MTR_3g065560 | 36.765 | 136 | 78 | 4 | 17 | 146 | 10 | 143 | 9.33e-19 | 81.6 |
| MsG0180004674.01.T01 | MTR_3g065560 | 34.752 | 141 | 85 | 4 | 174 | 309 | 8 | 146 | 3.56e-18 | 80.1 |
| MsG0180004674.01.T01 | MTR_4g127390 | 32.624 | 141 | 82 | 4 | 174 | 306 | 8 | 143 | 1.55e-16 | 75.5 |
| MsG0180004674.01.T01 | MTR_4g127390 | 34.091 | 132 | 79 | 4 | 21 | 146 | 14 | 143 | 8.66e-16 | 73.6 |
| MsG0180004674.01.T01 | MTR_6g052020 | 64.706 | 51 | 18 | 0 | 148 | 198 | 75 | 125 | 4.79e-16 | 73.9 |
| MsG0180004674.01.T01 | MTR_6g465020 | 64.706 | 51 | 18 | 0 | 148 | 198 | 73 | 123 | 1.55e-15 | 72.8 |
| MsG0180004674.01.T01 | MTR_3g058500 | 32.639 | 144 | 77 | 4 | 184 | 308 | 390 | 532 | 5.66e-15 | 75.9 |
| MsG0180004674.01.T01 | MTR_3g058500 | 34.266 | 143 | 73 | 6 | 23 | 146 | 390 | 530 | 5.77e-15 | 75.9 |
| MsG0180004674.01.T01 | MTR_5g055210 | 28.846 | 156 | 93 | 3 | 8 | 146 | 196 | 350 | 8.21e-15 | 75.1 |
| MsG0180004674.01.T01 | MTR_5g055210 | 28.302 | 159 | 96 | 3 | 5 | 146 | 271 | 428 | 9.81e-15 | 75.1 |
| MsG0180004674.01.T01 | MTR_5g055210 | 28.846 | 156 | 93 | 3 | 8 | 146 | 379 | 533 | 1.92e-14 | 74.3 |
| MsG0180004674.01.T01 | MTR_4g104300 | 47.059 | 68 | 35 | 1 | 91 | 158 | 27 | 93 | 2.30e-14 | 73.6 |
| MsG0180004674.01.T01 | MTR_1g019680 | 32.090 | 134 | 69 | 4 | 9 | 137 | 2 | 118 | 2.51e-13 | 66.2 |
| MsG0180004674.01.T01 | MTR_1g019680 | 32.558 | 129 | 60 | 4 | 179 | 299 | 11 | 120 | 2.94e-13 | 65.9 |
| MsG0180004674.01.T01 | MTR_4g113670 | 35.075 | 134 | 82 | 4 | 179 | 310 | 4 | 134 | 1.02e-11 | 64.7 |
| MsG0180004674.01.T01 | MTR_4g113670 | 35.075 | 134 | 82 | 4 | 179 | 310 | 4 | 134 | 2.87e-11 | 64.3 |
| MsG0180004674.01.T01 | MTR_4g113670 | 35.075 | 134 | 82 | 4 | 179 | 310 | 4 | 134 | 2.87e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004674.01.T01 | AT1G09320 | 43.505 | 331 | 161 | 7 | 2 | 307 | 21 | 350 | 9.99e-83 | 259 |
| MsG0180004674.01.T01 | AT1G09320 | 41.254 | 303 | 167 | 5 | 9 | 306 | 213 | 509 | 8.40e-80 | 251 |
| MsG0180004674.01.T01 | AT1G09320 | 39.130 | 138 | 80 | 3 | 17 | 152 | 380 | 515 | 6.42e-24 | 102 |
| MsG0180004674.01.T01 | AT3G06520 | 34.194 | 310 | 190 | 8 | 12 | 311 | 2 | 307 | 1.11e-45 | 161 |
| MsG0180004674.01.T01 | AT3G06520 | 32.226 | 301 | 192 | 7 | 17 | 308 | 169 | 466 | 2.58e-44 | 157 |
| MsG0180004674.01.T01 | AT3G06520 | 32.877 | 146 | 94 | 3 | 3 | 145 | 319 | 463 | 1.13e-16 | 80.5 |
| MsG0180004674.01.T01 | AT3G06520 | 34.194 | 310 | 190 | 8 | 12 | 311 | 2 | 307 | 1.11e-45 | 161 |
| MsG0180004674.01.T01 | AT3G06520 | 32.226 | 301 | 192 | 7 | 17 | 308 | 169 | 466 | 2.58e-44 | 157 |
| MsG0180004674.01.T01 | AT3G06520 | 32.877 | 146 | 94 | 3 | 3 | 145 | 319 | 463 | 1.13e-16 | 80.5 |
| MsG0180004674.01.T01 | AT2G47230 | 31.126 | 302 | 175 | 8 | 15 | 305 | 3 | 282 | 7.91e-32 | 125 |
| MsG0180004674.01.T01 | AT2G47230 | 40.441 | 136 | 72 | 4 | 178 | 306 | 5 | 138 | 1.56e-18 | 86.7 |
| MsG0180004674.01.T01 | AT1G26540 | 29.252 | 294 | 175 | 7 | 22 | 305 | 13 | 283 | 2.90e-31 | 124 |
| MsG0180004674.01.T01 | AT1G26540 | 43.511 | 131 | 66 | 4 | 183 | 306 | 13 | 142 | 2.86e-21 | 94.7 |
| MsG0180004674.01.T01 | AT2G47230 | 30.492 | 305 | 179 | 8 | 15 | 308 | 3 | 285 | 4.32e-31 | 123 |
| MsG0180004674.01.T01 | AT1G11420 | 29.431 | 299 | 172 | 10 | 16 | 305 | 6 | 274 | 9.90e-28 | 113 |
| MsG0180004674.01.T01 | AT1G11420 | 38.462 | 130 | 71 | 4 | 184 | 306 | 13 | 140 | 6.27e-15 | 75.5 |
| MsG0180004674.01.T01 | AT1G06340 | 41.085 | 129 | 71 | 4 | 181 | 306 | 6 | 132 | 2.23e-23 | 93.6 |
| MsG0180004674.01.T01 | AT1G06340 | 35.115 | 131 | 83 | 2 | 17 | 146 | 3 | 132 | 4.17e-23 | 93.2 |
| MsG0180004674.01.T01 | AT1G03300 | 26.510 | 298 | 180 | 9 | 23 | 305 | 9 | 282 | 5.64e-20 | 90.9 |
| MsG0180004674.01.T01 | AT3G62300 | 27.982 | 218 | 136 | 3 | 88 | 305 | 91 | 287 | 4.10e-19 | 88.2 |
| MsG0180004674.01.T01 | AT3G62300 | 27.982 | 218 | 136 | 3 | 88 | 305 | 91 | 287 | 4.47e-19 | 88.2 |
| MsG0180004674.01.T01 | AT1G68580 | 29.798 | 198 | 111 | 7 | 12 | 182 | 358 | 554 | 2.84e-16 | 79.7 |
| MsG0180004674.01.T01 | AT1G68580 | 29.798 | 198 | 111 | 7 | 12 | 182 | 262 | 458 | 3.04e-16 | 79.7 |
| MsG0180004674.01.T01 | AT1G68580 | 29.798 | 198 | 111 | 7 | 12 | 182 | 312 | 508 | 3.11e-16 | 79.7 |
| MsG0180004674.01.T01 | AT1G68580 | 28.571 | 168 | 98 | 5 | 12 | 159 | 358 | 523 | 5.75e-16 | 78.6 |
| MsG0180004674.01.T01 | AT1G68580 | 28.571 | 168 | 98 | 5 | 12 | 159 | 262 | 427 | 6.06e-16 | 78.2 |
| MsG0180004674.01.T01 | AT5G23800 | 25.552 | 317 | 201 | 13 | 8 | 305 | 3 | 303 | 1.84e-15 | 77.4 |
| MsG0180004674.01.T01 | AT5G23800 | 25.902 | 305 | 191 | 13 | 20 | 305 | 15 | 303 | 2.04e-15 | 77.0 |
Find 104 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATTGGATTGTGGGATTA+GGG | 0.217032 | 1:+81095971 | None:intergenic |
| GGAAGAACGGGTTTGGGATT+TGG | 0.220318 | 1:+81095946 | None:intergenic |
| TGCCATTGGATTGTGGGATT+AGG | 0.242791 | 1:+81095970 | None:intergenic |
| GAAGAACGGGTTTGGGATTT+GGG | 0.277890 | 1:+81095947 | None:intergenic |
| CGGCGGAGGAAGAACGGGTT+TGG | 0.292571 | 1:+81095939 | None:intergenic |
| TTTGGGTGCCATTGGATTGT+GGG | 0.330104 | 1:+81095964 | None:intergenic |
| GGTGTTGTTTCGAAAGTTCT+TGG | 0.336492 | 1:-81094494 | MsG0180004674.01.T01:CDS |
| TTCTTCCGACGGAGGCCAAC+CGG | 0.340135 | 1:-81095718 | MsG0180004674.01.T01:CDS |
| TGATAGTGACATCAAGAAAA+AGG | 0.345498 | 1:-81094828 | MsG0180004674.01.T01:CDS |
| TTGTTTCACGATTGCAGAAA+TGG | 0.347896 | 1:+81095995 | None:intergenic |
| GTGGACGAGGCCTCATTTGC+AGG | 0.372528 | 1:+81094591 | None:intergenic |
| AGTCCTGATGCAGCCTCAGC+TGG | 0.372803 | 1:+81094411 | None:intergenic |
| GTGTTGTTTCGAAAGTTCTT+GGG | 0.375525 | 1:-81094493 | MsG0180004674.01.T01:CDS |
| GGCGGAGGAAGAACGGGTTT+GGG | 0.384742 | 1:+81095940 | None:intergenic |
| TTGGCCTCCGTCGGAAGAAC+TGG | 0.398025 | 1:+81095722 | None:intergenic |
| GCCAACCGGGTGTTCAAATT+CGG | 0.399510 | 1:-81095704 | MsG0180004674.01.T01:CDS |
| GGGTCACATTACCGAGGAAT+TGG | 0.402101 | 1:-81095642 | MsG0180004674.01.T01:CDS |
| ATTTGGGTGCCATTGGATTG+TGG | 0.410630 | 1:+81095963 | None:intergenic |
| GTTTGGGATTTGGGTGCCAT+TGG | 0.413118 | 1:+81095956 | None:intergenic |
| AGCTGAGGCTGCATCAGGAC+TGG | 0.421739 | 1:-81094409 | MsG0180004674.01.T01:CDS |
| TAGCATACCTGTTGTGGAAA+AGG | 0.423836 | 1:+81095512 | None:intergenic |
| GGAGGCGGCGGAGGAAGAAC+GGG | 0.433436 | 1:+81095934 | None:intergenic |
| CTCGACCATGAACTTGTTGT+TGG | 0.436924 | 1:+81095817 | None:intergenic |
| TATAATGATGGGTGGTGGGT+TGG | 0.436977 | 1:-81094515 | MsG0180004674.01.T01:CDS |
| TTCCCAGCTGAGGCTGCATC+AGG | 0.438915 | 1:-81094414 | MsG0180004674.01.T01:CDS |
| AGCTCAGACTTCACCGTGAA+TGG | 0.439656 | 1:-81095556 | MsG0180004674.01.T01:CDS |
| AGGACTGGATGAATGGCAAA+TGG | 0.443156 | 1:-81094394 | MsG0180004674.01.T01:CDS |
| GAGACGGCGGACGATCTTGC+CGG | 0.445357 | 1:+81095841 | None:intergenic |
| TCTCGCCAACAACAAGTTCA+TGG | 0.452136 | 1:-81095822 | MsG0180004674.01.T01:CDS |
| GGTGCCGGGTTTGAAGAATT+CGG | 0.454639 | 1:+81095913 | None:intergenic |
| GTTGATGCTTATTATAATGA+TGG | 0.481252 | 1:-81094527 | MsG0180004674.01.T01:CDS |
| CTGCATCAGGACTGGATGAA+TGG | 0.487330 | 1:-81094401 | MsG0180004674.01.T01:CDS |
| ACGACGGTTTCCGCGGCTCA+TGG | 0.488561 | 1:-81095868 | MsG0180004674.01.T01:CDS |
| GAAGAATTCGGAGGCGGCGG+AGG | 0.488955 | 1:+81095925 | None:intergenic |
| CTTATTATAATGATGGGTGG+TGG | 0.496702 | 1:-81094520 | MsG0180004674.01.T01:CDS |
| GGATATCAACATCCTCTCTC+AGG | 0.498018 | 1:+81094612 | None:intergenic |
| TTTGAAGAATTCGGAGGCGG+CGG | 0.498036 | 1:+81095922 | None:intergenic |
| GTCGGAGCTGATTTCGACTA+AGG | 0.500636 | 1:+81095892 | None:intergenic |
| GCTGATTTCGACTAAGGTGC+CGG | 0.501280 | 1:+81095898 | None:intergenic |
| GTTGAACACGATCTGCTCCT+TGG | 0.501827 | 1:+81095586 | None:intergenic |
| CGGAGGCGGCGGAGGAAGAA+CGG | 0.503083 | 1:+81095933 | None:intergenic |
| GGTCGAGTACGATAACTTGA+TGG | 0.509478 | 1:-81095801 | MsG0180004674.01.T01:CDS |
| TAAGCCAGGGACATTGGTTG+AGG | 0.510370 | 1:-81094753 | MsG0180004674.01.T01:CDS |
| TCGGAAGAACTGGTCGGAGC+TGG | 0.513475 | 1:+81095732 | None:intergenic |
| TGAGGTTAAGCCAGGGACAT+TGG | 0.515519 | 1:-81094759 | MsG0180004674.01.T01:CDS |
| CATCGCCGAATTTGAACACC+CGG | 0.517080 | 1:+81095699 | None:intergenic |
| GAAGAACTGGTCGGAGCTGG+TGG | 0.517558 | 1:+81095735 | None:intergenic |
| CACAATGATGGGTGGTGGGA+GGG | 0.524378 | 1:-81095662 | MsG0180004674.01.T01:CDS |
| TCTTCCGACGGAGGCCAACC+GGG | 0.528442 | 1:-81095717 | MsG0180004674.01.T01:CDS |
| AAACCCTAGCATACCTGTTG+TGG | 0.533845 | 1:+81095506 | None:intergenic |
| AACACCCGGTTGGCCTCCGT+CGG | 0.537799 | 1:+81095713 | None:intergenic |
| CTGATTTCGACTAAGGTGCC+GGG | 0.537999 | 1:+81095899 | None:intergenic |
| GTATGATAGTCTGCTGGATG+AGG | 0.543018 | 1:-81094645 | MsG0180004674.01.T01:CDS |
| TTCCGCGGCTCATGGTTCAC+CGG | 0.547735 | 1:-81095860 | MsG0180004674.01.T01:CDS |
| CTGAAACTCAATTTCCTCAT+CGG | 0.550237 | 1:+81094439 | None:intergenic |
| CTTGTTGAGGTGAAGGGAGA+AGG | 0.553884 | 1:-81094683 | MsG0180004674.01.T01:CDS |
| CGTATCACAATGATGGGTGG+TGG | 0.555218 | 1:-81095667 | MsG0180004674.01.T01:CDS |
| GTTGATGCGTATCACAATGA+TGG | 0.557166 | 1:-81095674 | MsG0180004674.01.T01:CDS |
| GGACTGGATGAATGGCAAAT+GGG | 0.558392 | 1:-81094393 | MsG0180004674.01.T01:CDS |
| TCACAATGATGGGTGGTGGG+AGG | 0.559756 | 1:-81095663 | MsG0180004674.01.T01:CDS |
| CATACCTGTTGTGGAAAAGG+TGG | 0.561295 | 1:+81095515 | None:intergenic |
| CAAATGGGTCATGGTTTCAA+AGG | 0.562613 | 1:-81094378 | MsG0180004674.01.T01:CDS |
| TGGCACACTTGTTGAGGTGA+AGG | 0.566386 | 1:-81094690 | MsG0180004674.01.T01:CDS |
| GCCGCGGAAACCGTCGTCGT+CGG | 0.569690 | 1:+81095874 | None:intergenic |
| TTATTATAATGATGGGTGGT+GGG | 0.573076 | 1:-81094519 | MsG0180004674.01.T01:CDS |
| GAGGTTTGTAGTGATGAAGA+GGG | 0.574118 | 1:-81094734 | MsG0180004674.01.T01:CDS |
| GTCCTGATGCAGCCTCAGCT+GGG | 0.574209 | 1:+81094412 | None:intergenic |
| GGGTTTGAAGAATTCGGAGG+CGG | 0.574258 | 1:+81095919 | None:intergenic |
| TCTTCCATCCTCCAATTCCT+CGG | 0.576693 | 1:+81095631 | None:intergenic |
| TCACATTACCGAGGAATTGG+AGG | 0.577137 | 1:-81095639 | MsG0180004674.01.T01:CDS |
| TGAACTTGTTGTTGGCGAGA+CGG | 0.578198 | 1:+81095825 | None:intergenic |
| TGTCGAGTATGATAGTCTGC+TGG | 0.580405 | 1:-81094651 | MsG0180004674.01.T01:CDS |
| ATGTTGATATCCTGCAAATG+AGG | 0.580430 | 1:-81094601 | MsG0180004674.01.T01:CDS |
| TCCGACGACGACGGTTTCCG+CGG | 0.585264 | 1:-81095875 | MsG0180004674.01.T01:CDS |
| CAAACCTCAACCAATGTCCC+TGG | 0.595486 | 1:+81094749 | None:intergenic |
| GCCGAATTTGAACACCCGGT+TGG | 0.595693 | 1:+81095703 | None:intergenic |
| TTGATGCTTATTATAATGAT+GGG | 0.595786 | 1:-81094526 | MsG0180004674.01.T01:CDS |
| AGTTTCAGCATTCCCAGCTG+AGG | 0.597788 | 1:-81094424 | MsG0180004674.01.T01:CDS |
| TGTTGTTTCGAAAGTTCTTG+GGG | 0.598182 | 1:-81094492 | MsG0180004674.01.T01:CDS |
| TGTGTATTTCAGAGTCTCCA+AGG | 0.599045 | 1:-81095603 | MsG0180004674.01.T01:CDS |
| ACCCTAATCCCACAATCCAA+TGG | 0.606884 | 1:-81095972 | MsG0180004674.01.T01:exon |
| TGAGGTTTGTAGTGATGAAG+AGG | 0.609879 | 1:-81094735 | MsG0180004674.01.T01:CDS |
| GCCTCCGAATTCTTCAAACC+CGG | 0.614143 | 1:-81095917 | MsG0180004674.01.T01:CDS |
| GATGAATGGCAAATGGGTCA+TGG | 0.619406 | 1:-81094387 | MsG0180004674.01.T01:CDS |
| GGCACACTTGTTGAGGTGAA+GGG | 0.625182 | 1:-81094689 | MsG0180004674.01.T01:CDS |
| TTGATGCGTATCACAATGAT+GGG | 0.627101 | 1:-81095673 | MsG0180004674.01.T01:CDS |
| GGATTCAAGTCTCCTGAGAG+AGG | 0.629706 | 1:-81094624 | MsG0180004674.01.T01:CDS |
| TGCCGGTGAACCATGAGCCG+CGG | 0.630381 | 1:+81095858 | None:intergenic |
| ATGCTTATTATAATGATGGG+TGG | 0.634957 | 1:-81094523 | MsG0180004674.01.T01:CDS |
| AACTTGATGGAAGATGAAGC+AGG | 0.640519 | 1:-81095788 | MsG0180004674.01.T01:CDS |
| ATTACCGAGGAATTGGAGGA+TGG | 0.640993 | 1:-81095635 | MsG0180004674.01.T01:CDS |
| ATACCTGTTGTGGAAAAGGT+GGG | 0.641138 | 1:+81095516 | None:intergenic |
| GTATCACAATGATGGGTGGT+GGG | 0.643874 | 1:-81095666 | MsG0180004674.01.T01:CDS |
| GGAGCAGATCGTGTTCAACA+AGG | 0.655640 | 1:-81095582 | MsG0180004674.01.T01:CDS |
| GCCGGGTTTGAAGAATTCGG+AGG | 0.660085 | 1:+81095916 | None:intergenic |
| CCTCCGTCGGAAGAACTGGT+CGG | 0.661832 | 1:+81095726 | None:intergenic |
| GAAATCAGCTCCGACGACGA+CGG | 0.669902 | 1:-81095884 | MsG0180004674.01.T01:CDS |
| CCGACCAGTTCTTCCGACGG+AGG | 0.677803 | 1:-81095726 | MsG0180004674.01.T01:CDS |
| ACTTGTTGTTGGCGAGACGG+CGG | 0.680621 | 1:+81095828 | None:intergenic |
| GCTCCGACCAGTTCTTCCGA+CGG | 0.685738 | 1:-81095729 | MsG0180004674.01.T01:CDS |
| GCAGATCGTGTTCAACAAGG+AGG | 0.698994 | 1:-81095579 | MsG0180004674.01.T01:CDS |
| GAAGGTTGATGAAACTGTGA+CGG | 0.700826 | 1:-81094798 | MsG0180004674.01.T01:CDS |
| ATGCGTATCACAATGATGGG+TGG | 0.703777 | 1:-81095670 | MsG0180004674.01.T01:CDS |
| GTGGGAGGGTCACATTACCG+AGG | 0.703855 | 1:-81095648 | MsG0180004674.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTAAATAACAATAACAT+AGG | + | Chr1:81095482-81095501 | None:intergenic | 15.0% |
| !! | ATCTTTATAGACAAAGATAA+AGG | - | Chr1:81095050-81095069 | MsG0180004674.01.T01:intron | 20.0% |
| !! | TCTTTATAGACAAAGATAAA+GGG | - | Chr1:81095051-81095070 | MsG0180004674.01.T01:intron | 20.0% |
| !! | TTGATGCTTATTATAATGAT+GGG | - | Chr1:81095867-81095886 | MsG0180004674.01.T01:CDS | 20.0% |
| !!! | GTTGTTTTAATAAGCTATAT+TGG | - | Chr1:81095360-81095379 | MsG0180004674.01.T01:intron | 20.0% |
| ! | CCTGAAAAAAACAATATACT+TGG | + | Chr1:81095930-81095949 | None:intergenic | 25.0% |
| ! | GTTGATGCTTATTATAATGA+TGG | - | Chr1:81095866-81095885 | MsG0180004674.01.T01:CDS | 25.0% |
| ! | TCATAATAAGCTGTTAACAT+AGG | + | Chr1:81095257-81095276 | None:intergenic | 25.0% |
| ! | TCATCGAAAACTTATGAAAA+CGG | + | Chr1:81095177-81095196 | None:intergenic | 25.0% |
| ! | TTATTTGCATGACTTAGTAT+GGG | - | Chr1:81094970-81094989 | MsG0180004674.01.T01:intron | 25.0% |
| ! | TTGCAATTAAATGTTGTGAA+TGG | - | Chr1:81095509-81095528 | MsG0180004674.01.T01:intron | 25.0% |
| !! | CGTGTTTAGATTGAATTTTA+GGG | - | Chr1:81094939-81094958 | MsG0180004674.01.T01:intron | 25.0% |
| !! | TCGTGTTTAGATTGAATTTT+AGG | - | Chr1:81094938-81094957 | MsG0180004674.01.T01:intron | 25.0% |
| !!! | CCAAGTATATTGTTTTTTTC+AGG | - | Chr1:81095927-81095946 | MsG0180004674.01.T01:CDS | 25.0% |
| !!! | GCTGTTTTTATAAGCTATAT+TGG | - | Chr1:81095103-81095122 | MsG0180004674.01.T01:intron | 25.0% |
| CAAATAAGACAATCCAAACA+AGG | - | Chr1:81095230-81095249 | MsG0180004674.01.T01:intron | 30.0% | |
| GTTATTTGCATGACTTAGTA+TGG | - | Chr1:81094969-81094988 | MsG0180004674.01.T01:intron | 30.0% | |
| TGAATGGATGCATGAAAAAT+GGG | - | Chr1:81094853-81094872 | MsG0180004674.01.T01:intron | 30.0% | |
| ! | ATGCTTATTATAATGATGGG+TGG | - | Chr1:81095870-81095889 | MsG0180004674.01.T01:CDS | 30.0% |
| ! | ATTTTTCATGCATCCATTCA+CGG | + | Chr1:81094853-81094872 | None:intergenic | 30.0% |
| ! | TGATAGTGACATCAAGAAAA+AGG | - | Chr1:81095565-81095584 | MsG0180004674.01.T01:CDS | 30.0% |
| !! | TAAGTTTTGTGAAACTGTCA+TGG | + | Chr1:81095194-81095213 | None:intergenic | 30.0% |
| !! | TTATTATAATGATGGGTGGT+GGG | - | Chr1:81095874-81095893 | MsG0180004674.01.T01:CDS | 30.0% |
| ATGCTAGGGTTTGAATTCTA+GGG | - | Chr1:81094898-81094917 | MsG0180004674.01.T01:intron | 35.0% | |
| ATGTTGATATCCTGCAAATG+AGG | - | Chr1:81095792-81095811 | MsG0180004674.01.T01:CDS | 35.0% | |
| CAATAACATAGGACCTTGTT+TGG | + | Chr1:81095471-81095490 | None:intergenic | 35.0% | |
| CTGAAACTCAATTTCCTCAT+CGG | + | Chr1:81095957-81095976 | None:intergenic | 35.0% | |
| GTGAATGGATGCATGAAAAA+TGG | - | Chr1:81094852-81094871 | MsG0180004674.01.T01:intron | 35.0% | |
| TATGCTAGGGTTTGAATTCT+AGG | - | Chr1:81094897-81094916 | MsG0180004674.01.T01:intron | 35.0% | |
| TGACATCAAGAAAAAGGTGA+TGG | - | Chr1:81095571-81095590 | MsG0180004674.01.T01:CDS | 35.0% | |
| TGTTAACATAGGACCTTGTT+TGG | + | Chr1:81095246-81095265 | None:intergenic | 35.0% | |
| TTGATGCGTATCACAATGAT+GGG | - | Chr1:81094720-81094739 | MsG0180004674.01.T01:CDS | 35.0% | |
| TTGTTTCACGATTGCAGAAA+TGG | + | Chr1:81094401-81094420 | None:intergenic | 35.0% | |
| ! | GGAAGAGAATGTGAATTTTG+AGG | - | Chr1:81095616-81095635 | MsG0180004674.01.T01:CDS | 35.0% |
| !! | AGTGATGAAGAGGGTTTTAA+AGG | - | Chr1:81095668-81095687 | MsG0180004674.01.T01:CDS | 35.0% |
| !! | CTTATTATAATGATGGGTGG+TGG | - | Chr1:81095873-81095892 | MsG0180004674.01.T01:CDS | 35.0% |
| !! | GTGTTGTTTCGAAAGTTCTT+GGG | - | Chr1:81095900-81095919 | MsG0180004674.01.T01:CDS | 35.0% |
| !! | TGTTGTTTCGAAAGTTCTTG+GGG | - | Chr1:81095901-81095920 | MsG0180004674.01.T01:CDS | 35.0% |
| !!! | TGAATTTTGAGGTTAAGCCA+GGG | - | Chr1:81095627-81095646 | MsG0180004674.01.T01:CDS | 35.0% |
| !!! | TTTAAAGGAGCTTGGTTTTG+TGG | - | Chr1:81095683-81095702 | MsG0180004674.01.T01:CDS | 35.0% |
| AACTTGATGGAAGATGAAGC+AGG | - | Chr1:81094605-81094624 | MsG0180004674.01.T01:CDS | 40.0% | |
| ATACCTGTTGTGGAAAAGGT+GGG | + | Chr1:81094880-81094899 | None:intergenic | 40.0% | |
| CAAATGGGTCATGGTTTCAA+AGG | - | Chr1:81096015-81096034 | MsG0180004674.01.T01:five_prime_UTR | 40.0% | |
| GAGGTTTGTAGTGATGAAGA+GGG | - | Chr1:81095659-81095678 | MsG0180004674.01.T01:CDS | 40.0% | |
| GTTGATGCGTATCACAATGA+TGG | - | Chr1:81094719-81094738 | MsG0180004674.01.T01:CDS | 40.0% | |
| TAGCATACCTGTTGTGGAAA+AGG | + | Chr1:81094884-81094903 | None:intergenic | 40.0% | |
| TGAGGTTTGTAGTGATGAAG+AGG | - | Chr1:81095658-81095677 | MsG0180004674.01.T01:CDS | 40.0% | |
| TGTGTATTTCAGAGTCTCCA+AGG | - | Chr1:81094790-81094809 | MsG0180004674.01.T01:CDS | 40.0% | |
| TTTCCACAACAGGTATGCTA+GGG | - | Chr1:81094884-81094903 | MsG0180004674.01.T01:intron | 40.0% | |
| ! | CAAGAAAAAGGTGATGGTGA+AGG | - | Chr1:81095577-81095596 | MsG0180004674.01.T01:CDS | 40.0% |
| ! | TGACTTAGTATGGGCTTGTT+TGG | - | Chr1:81094979-81094998 | MsG0180004674.01.T01:intron | 40.0% |
| ! | TGAGCAACTTCAGCAGTTTT+TGG | + | Chr1:81095827-81095846 | None:intergenic | 40.0% |
| ! | TTTTCCACAACAGGTATGCT+AGG | - | Chr1:81094883-81094902 | MsG0180004674.01.T01:intron | 40.0% |
| !! | GAAGGTTGATGAAACTGTGA+CGG | - | Chr1:81095595-81095614 | MsG0180004674.01.T01:CDS | 40.0% |
| !! | GGTGTTGTTTCGAAAGTTCT+TGG | - | Chr1:81095899-81095918 | MsG0180004674.01.T01:CDS | 40.0% |
| !!! | AAGAGGGTTTTAAAGGAGCT+TGG | - | Chr1:81095675-81095694 | MsG0180004674.01.T01:CDS | 40.0% |
| !!! | GTGAATTTTGAGGTTAAGCC+AGG | - | Chr1:81095626-81095645 | MsG0180004674.01.T01:CDS | 40.0% |
| !!! | TTTTTTCAGGAACTCCGATG+AGG | - | Chr1:81095940-81095959 | MsG0180004674.01.T01:CDS | 40.0% |
| AAACCCTAGCATACCTGTTG+TGG | + | Chr1:81094890-81094909 | None:intergenic | 45.0% | |
| ACCCTAATCCCACAATCCAA+TGG | - | Chr1:81094421-81094440 | MsG0180004674.01.T01:CDS | 45.0% | |
| AGGACTGGATGAATGGCAAA+TGG | - | Chr1:81095999-81096018 | MsG0180004674.01.T01:five_prime_UTR | 45.0% | |
| ATTACCGAGGAATTGGAGGA+TGG | - | Chr1:81094758-81094777 | MsG0180004674.01.T01:CDS | 45.0% | |
| CATACCTGTTGTGGAAAAGG+TGG | + | Chr1:81094881-81094900 | None:intergenic | 45.0% | |
| GATGAATGGCAAATGGGTCA+TGG | - | Chr1:81096006-81096025 | MsG0180004674.01.T01:five_prime_UTR | 45.0% | |
| GCCATTGGATTGTGGGATTA+GGG | + | Chr1:81094425-81094444 | None:intergenic | 45.0% | |
| GGACTGGATGAATGGCAAAT+GGG | - | Chr1:81096000-81096019 | MsG0180004674.01.T01:five_prime_UTR | 45.0% | |
| GGATATCAACATCCTCTCTC+AGG | + | Chr1:81095784-81095803 | None:intergenic | 45.0% | |
| GGTCGAGTACGATAACTTGA+TGG | - | Chr1:81094592-81094611 | MsG0180004674.01.T01:CDS | 45.0% | |
| GTATGATAGTCTGCTGGATG+AGG | - | Chr1:81095748-81095767 | MsG0180004674.01.T01:CDS | 45.0% | |
| TCACATTACCGAGGAATTGG+AGG | - | Chr1:81094754-81094773 | MsG0180004674.01.T01:CDS | 45.0% | |
| TCTCGCCAACAACAAGTTCA+TGG | - | Chr1:81094571-81094590 | MsG0180004674.01.T01:CDS | 45.0% | |
| TCTTCCATCCTCCAATTCCT+CGG | + | Chr1:81094765-81094784 | None:intergenic | 45.0% | |
| TGCCATTGGATTGTGGGATT+AGG | + | Chr1:81094426-81094445 | None:intergenic | 45.0% | |
| TGTCGAGTATGATAGTCTGC+TGG | - | Chr1:81095742-81095761 | MsG0180004674.01.T01:CDS | 45.0% | |
| ! | ATGCGTATCACAATGATGGG+TGG | - | Chr1:81094723-81094742 | MsG0180004674.01.T01:CDS | 45.0% |
| ! | GAAGAACGGGTTTGGGATTT+GGG | + | Chr1:81094449-81094468 | None:intergenic | 45.0% |
| !! | ATTTGGGTGCCATTGGATTG+TGG | + | Chr1:81094433-81094452 | None:intergenic | 45.0% |
| !! | CTCGACCATGAACTTGTTGT+TGG | + | Chr1:81094579-81094598 | None:intergenic | 45.0% |
| !! | GCAACTTCAGCAGTTTTTGG+TGG | + | Chr1:81095824-81095843 | None:intergenic | 45.0% |
| !! | GTATCACAATGATGGGTGGT+GGG | - | Chr1:81094727-81094746 | MsG0180004674.01.T01:CDS | 45.0% |
| !! | GTTTTGTGGCACACTTGTTG+AGG | - | Chr1:81095697-81095716 | MsG0180004674.01.T01:CDS | 45.0% |
| !! | TATAATGATGGGTGGTGGGT+TGG | - | Chr1:81095878-81095897 | MsG0180004674.01.T01:CDS | 45.0% |
| !! | TGAACTTGTTGTTGGCGAGA+CGG | + | Chr1:81094571-81094590 | None:intergenic | 45.0% |
| !! | TTTGGGTGCCATTGGATTGT+GGG | + | Chr1:81094432-81094451 | None:intergenic | 45.0% |
| !! | TTGTTAATTATTAATATTAT+AGG | - | Chr1:81095541-81095560 | MsG0180004674.01.T01:CDS | 5.0% |
| AGCTCAGACTTCACCGTGAA+TGG | - | Chr1:81094837-81094856 | MsG0180004674.01.T01:intron | 50.0% | |
| AGTTTCAGCATTCCCAGCTG+AGG | - | Chr1:81095969-81095988 | MsG0180004674.01.T01:exon | 50.0% | |
| CAAACCTCAACCAATGTCCC+TGG | + | Chr1:81095647-81095666 | None:intergenic | 50.0% | |
| CATCGCCGAATTTGAACACC+CGG | + | Chr1:81094697-81094716 | None:intergenic | 50.0% | |
| CTGCATCAGGACTGGATGAA+TGG | - | Chr1:81095992-81096011 | MsG0180004674.01.T01:five_prime_UTR | 50.0% | |
| CTTGTTGAGGTGAAGGGAGA+AGG | - | Chr1:81095710-81095729 | MsG0180004674.01.T01:CDS | 50.0% | |
| GCAGATCGTGTTCAACAAGG+AGG | - | Chr1:81094814-81094833 | MsG0180004674.01.T01:CDS | 50.0% | |
| GCCAACCGGGTGTTCAAATT+CGG | - | Chr1:81094689-81094708 | MsG0180004674.01.T01:CDS | 50.0% | |
| GCCTCCGAATTCTTCAAACC+CGG | - | Chr1:81094476-81094495 | MsG0180004674.01.T01:CDS | 50.0% | |
| GGAGCAGATCGTGTTCAACA+AGG | - | Chr1:81094811-81094830 | MsG0180004674.01.T01:CDS | 50.0% | |
| GGATTCAAGTCTCCTGAGAG+AGG | - | Chr1:81095769-81095788 | MsG0180004674.01.T01:CDS | 50.0% | |
| GGGTCACATTACCGAGGAAT+TGG | - | Chr1:81094751-81094770 | MsG0180004674.01.T01:CDS | 50.0% | |
| GGGTTTGAAGAATTCGGAGG+CGG | + | Chr1:81094477-81094496 | None:intergenic | 50.0% | |
| GTTGAACACGATCTGCTCCT+TGG | + | Chr1:81094810-81094829 | None:intergenic | 50.0% | |
| TGAGGTTAAGCCAGGGACAT+TGG | - | Chr1:81095634-81095653 | MsG0180004674.01.T01:CDS | 50.0% | |
| TTTGAAGAATTCGGAGGCGG+CGG | + | Chr1:81094474-81094493 | None:intergenic | 50.0% | |
| ! | CTGATTTCGACTAAGGTGCC+GGG | + | Chr1:81094497-81094516 | None:intergenic | 50.0% |
| ! | GCTGATTTCGACTAAGGTGC+CGG | + | Chr1:81094498-81094517 | None:intergenic | 50.0% |
| ! | GGAAGAACGGGTTTGGGATT+TGG | + | Chr1:81094450-81094469 | None:intergenic | 50.0% |
| ! | GGCACACTTGTTGAGGTGAA+GGG | - | Chr1:81095704-81095723 | MsG0180004674.01.T01:CDS | 50.0% |
| ! | GGTGCCGGGTTTGAAGAATT+CGG | + | Chr1:81094483-81094502 | None:intergenic | 50.0% |
| ! | GTCGGAGCTGATTTCGACTA+AGG | + | Chr1:81094504-81094523 | None:intergenic | 50.0% |
| ! | GTTTGGGATTTGGGTGCCAT+TGG | + | Chr1:81094440-81094459 | None:intergenic | 50.0% |
| ! | TAAGCCAGGGACATTGGTTG+AGG | - | Chr1:81095640-81095659 | MsG0180004674.01.T01:CDS | 50.0% |
| ! | TGGCACACTTGTTGAGGTGA+AGG | - | Chr1:81095703-81095722 | MsG0180004674.01.T01:CDS | 50.0% |
| !! | CGTATCACAATGATGGGTGG+TGG | - | Chr1:81094726-81094745 | MsG0180004674.01.T01:CDS | 50.0% |
| !!! | TCAGCAGTTTTTGGTGGACG+AGG | + | Chr1:81095818-81095837 | None:intergenic | 50.0% |
| GAAATCAGCTCCGACGACGA+CGG | - | Chr1:81094509-81094528 | MsG0180004674.01.T01:CDS | 55.0% | |
| GCCGAATTTGAACACCCGGT+TGG | + | Chr1:81094693-81094712 | None:intergenic | 55.0% | |
| GCCGGGTTTGAAGAATTCGG+AGG | + | Chr1:81094480-81094499 | None:intergenic | 55.0% | |
| ! | GGTCCCACCTTTTCCACAAC+AGG | - | Chr1:81094874-81094893 | MsG0180004674.01.T01:intron | 55.0% |
| !! | ACTTGTTGTTGGCGAGACGG+CGG | + | Chr1:81094568-81094587 | None:intergenic | 55.0% |
| !! | CACAATGATGGGTGGTGGGA+GGG | - | Chr1:81094731-81094750 | MsG0180004674.01.T01:CDS | 55.0% |
| !! | TCACAATGATGGGTGGTGGG+AGG | - | Chr1:81094730-81094749 | MsG0180004674.01.T01:CDS | 55.0% |
| AGCTGAGGCTGCATCAGGAC+TGG | - | Chr1:81095984-81096003 | MsG0180004674.01.T01:five_prime_UTR | 60.0% | |
| AGTCCTGATGCAGCCTCAGC+TGG | + | Chr1:81095985-81096004 | None:intergenic | 60.0% | |
| CCTCCGTCGGAAGAACTGGT+CGG | + | Chr1:81094670-81094689 | None:intergenic | 60.0% | |
| GAAGAACTGGTCGGAGCTGG+TGG | + | Chr1:81094661-81094680 | None:intergenic | 60.0% | |
| GCTCCGACCAGTTCTTCCGA+CGG | - | Chr1:81094664-81094683 | MsG0180004674.01.T01:CDS | 60.0% | |
| GTCCTGATGCAGCCTCAGCT+GGG | + | Chr1:81095984-81096003 | None:intergenic | 60.0% | |
| GTGGACGAGGCCTCATTTGC+AGG | + | Chr1:81095805-81095824 | None:intergenic | 60.0% | |
| GTGGGAGGGTCACATTACCG+AGG | - | Chr1:81094745-81094764 | MsG0180004674.01.T01:CDS | 60.0% | |
| TCGGAAGAACTGGTCGGAGC+TGG | + | Chr1:81094664-81094683 | None:intergenic | 60.0% | |
| TTCCCAGCTGAGGCTGCATC+AGG | - | Chr1:81095979-81095998 | MsG0180004674.01.T01:five_prime_UTR | 60.0% | |
| TTCCGCGGCTCATGGTTCAC+CGG | - | Chr1:81094533-81094552 | MsG0180004674.01.T01:CDS | 60.0% | |
| TTCTTCCGACGGAGGCCAAC+CGG | - | Chr1:81094675-81094694 | MsG0180004674.01.T01:CDS | 60.0% | |
| TTGGCCTCCGTCGGAAGAAC+TGG | + | Chr1:81094674-81094693 | None:intergenic | 60.0% | |
| ! | GGCGGAGGAAGAACGGGTTT+GGG | + | Chr1:81094456-81094475 | None:intergenic | 60.0% |
| ACGACGGTTTCCGCGGCTCA+TGG | - | Chr1:81094525-81094544 | MsG0180004674.01.T01:CDS | 65.0% | |
| CCGACCAGTTCTTCCGACGG+AGG | - | Chr1:81094667-81094686 | MsG0180004674.01.T01:CDS | 65.0% | |
| GAAGAATTCGGAGGCGGCGG+AGG | + | Chr1:81094471-81094490 | None:intergenic | 65.0% | |
| GAGACGGCGGACGATCTTGC+CGG | + | Chr1:81094555-81094574 | None:intergenic | 65.0% | |
| TCCGACGACGACGGTTTCCG+CGG | - | Chr1:81094518-81094537 | MsG0180004674.01.T01:CDS | 65.0% | |
| TCTTCCGACGGAGGCCAACC+GGG | - | Chr1:81094676-81094695 | MsG0180004674.01.T01:CDS | 65.0% | |
| TGCCGGTGAACCATGAGCCG+CGG | + | Chr1:81094538-81094557 | None:intergenic | 65.0% | |
| ! | CGGCGGAGGAAGAACGGGTT+TGG | + | Chr1:81094457-81094476 | None:intergenic | 65.0% |
| !! | AACACCCGGTTGGCCTCCGT+CGG | + | Chr1:81094683-81094702 | None:intergenic | 65.0% |
| CGGAGGCGGCGGAGGAAGAA+CGG | + | Chr1:81094463-81094482 | None:intergenic | 70.0% | |
| GCCGCGGAAACCGTCGTCGT+CGG | + | Chr1:81094522-81094541 | None:intergenic | 70.0% | |
| GGAGGCGGCGGAGGAAGAAC+GGG | + | Chr1:81094462-81094481 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 81094373 | 81096042 | 81094373 | ID=MsG0180004674.01;Name=MsG0180004674.01 |
| Chr1 | mRNA | 81094373 | 81096042 | 81094373 | ID=MsG0180004674.01.T01;Parent=MsG0180004674.01;Name=MsG0180004674.01.T01;_AED=0.36;_eAED=0.36;_QI=67|1|0.5|1|1|1|2|0|311 |
| Chr1 | exon | 81094373 | 81094852 | 81094373 | ID=MsG0180004674.01.T01:exon:34343;Parent=MsG0180004674.01.T01 |
| Chr1 | exon | 81095520 | 81096042 | 81095520 | ID=MsG0180004674.01.T01:exon:34342;Parent=MsG0180004674.01.T01 |
| Chr1 | five_prime_UTR | 81095976 | 81096042 | 81095976 | ID=MsG0180004674.01.T01:five_prime_utr;Parent=MsG0180004674.01.T01 |
| Chr1 | CDS | 81095520 | 81095975 | 81095520 | ID=MsG0180004674.01.T01:cds;Parent=MsG0180004674.01.T01 |
| Chr1 | CDS | 81094373 | 81094852 | 81094373 | ID=MsG0180004674.01.T01:cds;Parent=MsG0180004674.01.T01 |
| Gene Sequence |
| Protein sequence |
