AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021719.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021719.01.T01 MTR_7g053290 75.765 392 78 1 1 375 1 392 0.0 597
MsG0480021719.01.T01 MTR_4g074950 82.133 375 26 4 1 375 1 334 0.0 584
MsG0480021719.01.T01 MTR_2g066850 63.918 97 18 1 225 304 934 1030 1.85e-27 114
MsG0480021719.01.T01 MTR_7g037650 72.881 59 16 0 254 312 458 516 1.09e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021719.01.T01 AT2G05990 71.318 387 93 2 1 369 1 387 0.0 540
MsG0480021719.01.T01 AT2G05990 71.318 387 93 2 1 369 1 387 0.0 540

Find 111 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGCAATGTACAGAATT+TGG 0.164025 4:+63423174 None:intergenic
AAATAACCTTTCAAATTAAT+TGG 0.170444 4:+63426809 None:intergenic
TTAATTGGCAATCCTGAAAT+TGG 0.172350 4:+63426824 None:intergenic
CATTGCCTTTGTCGCAATTT+TGG 0.179822 4:+63426868 None:intergenic
TTCAAACGTGGAGTCTATTT+TGG 0.187569 4:-63428347 MsG0480021719.01.T01:five_prime_UTR
ATTACCTGATGGTTCATTAA+TGG 0.232168 4:-63425971 MsG0480021719.01.T01:CDS
CATCTATTGCTTACATCTTC+TGG 0.234437 4:+63425895 None:intergenic
AGCGAAACAAGTCCAATTTC+AGG 0.251911 4:-63426836 MsG0480021719.01.T01:CDS
TTGCAGCAAGATATCCTTTC+CGG 0.264331 4:+63424766 None:intergenic
GCTGGAGCTGAAATTCTTCT+TGG 0.355636 4:-63426307 MsG0480021719.01.T01:CDS
GGTGCTTAATGCTGCTCCTT+GGG 0.382381 4:+63423406 None:intergenic
GAGAATTTAGTAGAAGTTGT+TGG 0.390383 4:+63428173 None:intergenic
GCTGCCAAAGTCTTCCTTAA+CGG 0.394446 4:+63424936 None:intergenic
TACCTGGACTGTCCATTTGC+TGG 0.395362 4:+63425751 None:intergenic
GCAAAATCTCTTGCTGCAGC+TGG 0.395785 4:-63426325 MsG0480021719.01.T01:CDS
CTGAAATTCTTCTTGGCACA+TGG 0.397489 4:-63426300 MsG0480021719.01.T01:CDS
GGTAAAAGAGCGTTTATTGC+TGG 0.404119 4:-63426382 MsG0480021719.01.T01:CDS
GAAAGAAATTAATGCCTAGT+AGG 0.404777 4:-63423147 MsG0480021719.01.T01:three_prime_UTR
CAGTCCTATATTTAGTGATC+TGG 0.407629 4:-63423434 MsG0480021719.01.T01:CDS
GGAAGTGTCGAACAAATGTT+TGG 0.410324 4:+63428247 None:intergenic
GATGTGAGCACTGTGGTTCT+TGG 0.420119 4:-63426995 MsG0480021719.01.T01:CDS
TTTGCAGCACGACTTCTTAG+TGG 0.421625 4:+63423735 None:intergenic
AAAACAAACAAGCGCTATGC+TGG 0.427633 4:-63425776 MsG0480021719.01.T01:CDS
AAATTTCCCACGTCGTAAGC+TGG 0.427967 4:+63426093 None:intergenic
AGTCGTGCTGCAAAAGCAAT+TGG 0.429867 4:-63423726 MsG0480021719.01.T01:CDS
TGCAGCAAGATATCCTTTCC+GGG 0.431457 4:+63424767 None:intergenic
GCTGGTGTGGCTGATGATAA+TGG 0.434025 4:-63426364 MsG0480021719.01.T01:CDS
TGGTGCTTAATGCTGCTCCT+TGG 0.434362 4:+63423405 None:intergenic
AATTACCAAAGTTTATCCCT+TGG 0.437748 4:-63425947 MsG0480021719.01.T01:CDS
ATGTCCAGATCACTAAATAT+AGG 0.451168 4:+63423430 None:intergenic
TGCTATATGCTCAGAAGAGC+AGG 0.451770 4:-63423268 MsG0480021719.01.T01:three_prime_UTR
GAGACTACACTGTCTAAGTT+GGG 0.456735 4:+63423374 None:intergenic
CTCTTTCTGTAGAGGTGCAT+TGG 0.459409 4:+63423671 None:intergenic
ATTTCCATTAATGAACCATC+AGG 0.460508 4:+63425967 None:intergenic
TTCATATGTAACAGAGGAGG+TGG 0.465333 4:-63423557 MsG0480021719.01.T01:intron
CCACGATCCCACCTTGGACT+TGG 0.475734 4:+63426970 None:intergenic
AGTTCACTTGCGCGTGAGAC+GGG 0.478000 4:+63428287 None:intergenic
AGCGAAGCAAATACTCTAAG+TGG 0.478194 4:+63423352 None:intergenic
GGAAGTTGCTGAATCCGTTA+AGG 0.478229 4:-63424950 MsG0480021719.01.T01:CDS
TTACGGTACCTCTGGTCCAT+TGG 0.479765 4:+63424888 None:intergenic
GGATGTCTCCAGCAGTGGTT+TGG 0.487037 4:+63424788 None:intergenic
AGCATCCAAGGGATAAACTT+TGG 0.487197 4:+63425942 None:intergenic
GGAGACTACACTGTCTAAGT+TGG 0.491103 4:+63423373 None:intergenic
AAAGAAATTAATGCCTAGTA+GGG 0.491481 4:-63423146 MsG0480021719.01.T01:three_prime_UTR
GCATCAGAGAGGATCATTCC+TGG 0.496552 4:-63424271 MsG0480021719.01.T01:CDS
GTCTAAGTTGGGGTGAGACT+TGG 0.496858 4:+63423385 None:intergenic
TGCGTACGAGAGGAAAGCTT+TGG 0.496861 4:+63428226 None:intergenic
CTTGTCGTCACCTTTAGCAT+CGG 0.500580 4:-63423518 MsG0480021719.01.T01:CDS
ATAGGTGACCAAACCACTGC+TGG 0.506146 4:-63424796 MsG0480021719.01.T01:intron
ATCTGCCAAAATTGCGACAA+AGG 0.509695 4:-63426873 MsG0480021719.01.T01:CDS
GCTGCCATCTTCAATGTGTA+TGG 0.515768 4:+63427085 None:intergenic
TGACAATGGTTTGAATGCTA+TGG 0.518772 4:-63423470 MsG0480021719.01.T01:CDS
GAATCCGTTAAGGAAGACTT+TGG 0.520209 4:-63424940 MsG0480021719.01.T01:CDS
AAAGTCTCTACCACCCTACT+AGG 0.520612 4:+63423133 None:intergenic
CTTGTCCACTCTCTTGCCAA+TGG 0.521270 4:-63424904 MsG0480021719.01.T01:CDS
TTCCGGGATGTCTCCAGCAG+TGG 0.524370 4:+63424783 None:intergenic
TGAGGATTTACCGGCAATGT+AGG 0.526381 4:+63428142 None:intergenic
CAGTTCACTTGCGCGTGAGA+CGG 0.533153 4:+63428286 None:intergenic
CATATAGCAGATACATAGAA+AGG 0.540587 4:+63423282 None:intergenic
TGATGTAAAGCTCCGTTGGA+AGG 0.542917 4:+63426907 None:intergenic
GCTATGCTGGATCCAGCAAA+TGG 0.542978 4:-63425763 MsG0480021719.01.T01:CDS
GGATTGCCAATTAATTTGAA+AGG 0.543647 4:-63426815 MsG0480021719.01.T01:intron
GACAATGGTTTGAATGCTAT+GGG 0.544764 4:-63423469 MsG0480021719.01.T01:CDS
CGGCTGCTGCTGCGTACGAG+AGG 0.547845 4:+63428216 None:intergenic
ATGATGATGTAAAGCTCCGT+TGG 0.551146 4:+63426903 None:intergenic
TGAAATTCTTCTTGGCACAT+GGG 0.554722 4:-63426299 MsG0480021719.01.T01:CDS
AACCACTGCTGGAGACATCC+CGG 0.557664 4:-63424785 MsG0480021719.01.T01:CDS
CTACAGAAAGAGCTATCAGC+AGG 0.561168 4:-63423660 MsG0480021719.01.T01:intron
AGAGTCAACACTATATCTGC+TGG 0.562777 4:-63423974 MsG0480021719.01.T01:intron
CTTGGTGCCAAGTCCAAGGT+GGG 0.564454 4:-63426977 MsG0480021719.01.T01:CDS
GGTTTGAATGCTATGGGCGT+TGG 0.565599 4:-63423463 MsG0480021719.01.T01:CDS
CATCCGTGCAGCCCTTCCAA+CGG 0.566826 4:-63426919 MsG0480021719.01.T01:CDS
GCTGATAGCTCTTTCTGTAG+AGG 0.574157 4:+63423663 None:intergenic
ATCCAGCAAATGGACAGTCC+AGG 0.577046 4:-63425753 MsG0480021719.01.T01:intron
CATACCATACACATTGAAGA+TGG 0.580143 4:-63427089 MsG0480021719.01.T01:exon
ACTCCACGTTTGAAATACTC+TGG 0.580240 4:+63428356 None:intergenic
CATCAGAGAGGATCATTCCT+GGG 0.580610 4:-63424270 MsG0480021719.01.T01:intron
CCTTTAGCATCGGCTATCAC+AGG 0.582392 4:-63423508 MsG0480021719.01.T01:CDS
TTTATTCCACGATCCCACCT+TGG 0.585975 4:+63426964 None:intergenic
CTGGTCCATTGGCAAGAGAG+TGG 0.587174 4:+63424899 None:intergenic
TAGTGATCTGGACATTCCCA+AGG 0.589605 4:-63423422 MsG0480021719.01.T01:CDS
CATTGGCAAGAGAGTGGACA+AGG 0.589970 4:+63424905 None:intergenic
CATCTTCAATGTGTATGGTA+TGG 0.592572 4:+63427090 None:intergenic
GGTTCTTGGTGCCAAGTCCA+AGG 0.594912 4:-63426981 MsG0480021719.01.T01:CDS
CTCTCTTGCCAATGGACCAG+AGG 0.596272 4:-63424896 MsG0480021719.01.T01:intron
GCTCCGTTGGAAGGGCTGCA+CGG 0.599639 4:+63426916 None:intergenic
ACCGTTCTATATGTTGACAA+TGG 0.601081 4:-63423484 MsG0480021719.01.T01:CDS
TCTTGGTGCCAAGTCCAAGG+TGG 0.601682 4:-63426978 MsG0480021719.01.T01:CDS
AATGAAGATAATTGTTATAG+CGG 0.602441 4:+63428196 None:intergenic
ACCATTGTCAACATATAGAA+CGG 0.609256 4:+63423483 None:intergenic
CCTGTGATAGCCGATGCTAA+AGG 0.610330 4:+63423508 None:intergenic
GTGGCTGATGATAATGGATA+CGG 0.612029 4:-63426358 MsG0480021719.01.T01:CDS
CCAAGTCCAAGGTGGGATCG+TGG 0.612288 4:-63426970 MsG0480021719.01.T01:CDS
GAAATTAATGCCTAGTAGGG+TGG 0.614070 4:-63423143 MsG0480021719.01.T01:three_prime_UTR
TTGAGTCCAGCTTACGACGT+GGG 0.620943 4:-63426099 MsG0480021719.01.T01:CDS
AAGAGCGTTTATTGCTGGTG+TGG 0.626005 4:-63426377 MsG0480021719.01.T01:CDS
GATGTAAAGCTCCGTTGGAA+GGG 0.627579 4:+63426908 None:intergenic
TGGTCTAGATTGCATTACTG+CGG 0.631797 4:-63423200 MsG0480021719.01.T01:three_prime_UTR
TCATATGTAACAGAGGAGGT+GGG 0.636128 4:-63423556 MsG0480021719.01.T01:intron
CTGCTGGAGACATCCCGGAA+AGG 0.640035 4:-63424780 MsG0480021719.01.T01:CDS
TGATGATACAGATACGGCGG+TGG 0.642111 4:-63424171 MsG0480021719.01.T01:intron
CTGATGATAATGGATACGGA+TGG 0.656811 4:-63426354 MsG0480021719.01.T01:CDS
AGACTACACTGTCTAAGTTG+GGG 0.666950 4:+63423375 None:intergenic
TGATGATAATGGATACGGAT+GGG 0.675921 4:-63426353 MsG0480021719.01.T01:CDS
TTTGAGTCCAGCTTACGACG+TGG 0.685237 4:-63426100 MsG0480021719.01.T01:CDS
TCACATACATCGCATCAGAG+AGG 0.710453 4:-63424282 MsG0480021719.01.T01:CDS
ACACCAGAGTATTTCAAACG+TGG 0.712573 4:-63428359 MsG0480021719.01.T01:five_prime_UTR
TAGCTACACTCTAACACGCG+CGG 0.712681 4:+63428315 None:intergenic
AAGAACCACAGTGCTCACAT+CGG 0.713720 4:+63426997 None:intergenic
AAATGATGATACAGATACGG+CGG 0.727109 4:-63424174 MsG0480021719.01.T01:intron
GTTTGCCGATGTGAGCACTG+TGG 0.800515 4:-63427002 MsG0480021719.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAATTATATACC+TGG + Chr4:63425764-63425783 None:intergenic 10.0%
!! TTATTAAAAAAAATGAAATG+AGG + Chr4:63425627-63425646 None:intergenic 10.0%
!!! TGTAAGTTTTTATTTTATTT+CGG - Chr4:63425224-63425243 MsG0480021719.01.T01:intron 10.0%
!! AAAAATAAAAAATCAGTATG+AGG + Chr4:63425682-63425701 None:intergenic 15.0%
!! AAATAACCTTTCAAATTAAT+TGG + Chr4:63424690-63424709 None:intergenic 15.0%
!! GAAATAAAATAAAAACTTAC+AGG + Chr4:63425225-63425244 None:intergenic 15.0%
!! TAATAAAAATGTTTGATCTA+TGG - Chr4:63428268-63428287 MsG0480021719.01.T01:five_prime_UTR 15.0%
!! TCATTCAAATACAATTAAAA+AGG + Chr4:63423491-63423510 None:intergenic 15.0%
!!! AACTTATTTTTTTGTCATAT+TGG - Chr4:63423757-63423776 MsG0480021719.01.T01:intron 15.0%
!!! AATGAATAAAAGTTGAATTT+TGG + Chr4:63423454-63423473 None:intergenic 15.0%
!!! AGTAATAAATGATTTTCATT+TGG - Chr4:63426349-63426368 MsG0480021719.01.T01:CDS 15.0%
!!! ATTTTATTTCGGATAAAAAA+CGG - Chr4:63425235-63425254 MsG0480021719.01.T01:intron 15.0%
!!! CATAAGTTATTTGATTTTAA+TGG - Chr4:63423666-63423685 MsG0480021719.01.T01:CDS 15.0%
!!! CATACTGATTTTTTATTTTT+GGG - Chr4:63425682-63425701 MsG0480021719.01.T01:intron 15.0%
!!! GTAATAAATGATTTTCATTT+GGG - Chr4:63426350-63426369 MsG0480021719.01.T01:CDS 15.0%
!!! GTTTTTCTATAATGTTTTTA+AGG - Chr4:63423937-63423956 MsG0480021719.01.T01:intron 15.0%
!!! TCATACTGATTTTTTATTTT+TGG - Chr4:63425681-63425700 MsG0480021719.01.T01:intron 15.0%
!!! TTTTAATCTTAAACTGTTTA+CGG - Chr4:63423420-63423439 MsG0480021719.01.T01:CDS 15.0%
!! AAGGCTAATAAAAAATACTT+TGG + Chr4:63427062-63427081 None:intergenic 20.0%
!! AATAAGCTAAAAACAGATTA+TGG + Chr4:63424159-63424178 None:intergenic 20.0%
!! AATGAAGATAATTGTTATAG+CGG + Chr4:63423303-63423322 None:intergenic 20.0%
!! ATAAATGTATCACTTACAAA+AGG + Chr4:63425342-63425361 None:intergenic 20.0%
!! ATATAGTGTATTACAAGTTT+AGG - Chr4:63425844-63425863 MsG0480021719.01.T01:intron 20.0%
!! ATATCATTCAATTGAAAAGA+TGG + Chr4:63426039-63426058 None:intergenic 20.0%
!! TTAAAGTGAGCATAAAAAAA+TGG + Chr4:63424714-63424733 None:intergenic 20.0%
!! TTATCAACAAAAGATAAATC+TGG + Chr4:63424995-63425014 None:intergenic 20.0%
!! TTATGCTCACTTTAATTAAT+AGG - Chr4:63424719-63424738 MsG0480021719.01.T01:intron 20.0%
!! TTTAATCTTAAACTGTTTAC+GGG - Chr4:63423421-63423440 MsG0480021719.01.T01:CDS 20.0%
!!! AATTTGTTTTATACCATGTT+GGG - Chr4:63426207-63426226 MsG0480021719.01.T01:intron 20.0%
!!! ATGAAAAAATTGGTAGTTAA+TGG + Chr4:63424817-63424836 None:intergenic 20.0%
!!! TAAGCAATTAACTTTGTTAT+AGG - Chr4:63426682-63426701 MsG0480021719.01.T01:intron 20.0%
!!! TAATTTGTTTTATACCATGT+TGG - Chr4:63426206-63426225 MsG0480021719.01.T01:intron 20.0%
!!! TATATTGCAACTGTATTTTA+AGG - Chr4:63426134-63426153 MsG0480021719.01.T01:intron 20.0%
!!! TGAAAAAATTGGTAGTTAAT+GGG + Chr4:63424816-63424835 None:intergenic 20.0%
!!! TTTATTCATTTTGCATAACT+GGG - Chr4:63423464-63423483 MsG0480021719.01.T01:CDS 20.0%
!!! TTTTATTCATTTTGCATAAC+TGG - Chr4:63423463-63423482 MsG0480021719.01.T01:CDS 20.0%
!!! TTTTATTTCGGATAAAAAAC+GGG - Chr4:63425236-63425255 MsG0480021719.01.T01:intron 20.0%
!!! TTTTTGTGACTGTATATAAA+AGG - Chr4:63423702-63423721 MsG0480021719.01.T01:CDS 20.0%
! AAAGAAATTAATGCCTAGTA+GGG - Chr4:63428350-63428369 MsG0480021719.01.T01:five_prime_UTR 25.0%
! AACTAAAAATAACTGTGAGA+CGG + Chr4:63427407-63427426 None:intergenic 25.0%
! AATTAAGGATGTGTTTGAAT+TGG - Chr4:63424048-63424067 MsG0480021719.01.T01:intron 25.0%
! ACAATGGAACATAAAAATAC+AGG + Chr4:63424006-63424025 None:intergenic 25.0%
! ACTAAATGATGATACAGATA+CGG - Chr4:63427319-63427338 MsG0480021719.01.T01:intron 25.0%
! AGTTAATTGCTTAATAAAGC+TGG + Chr4:63426675-63426694 None:intergenic 25.0%
! AGTTGTAAAATATTGCCTAT+AGG - Chr4:63424868-63424887 MsG0480021719.01.T01:intron 25.0%
! AGTTTCCTGATGTAAATTTA+GGG - Chr4:63424374-63424393 MsG0480021719.01.T01:intron 25.0%
! CAAAACTAAACAATTAGATG+AGG + Chr4:63423375-63423394 None:intergenic 25.0%
! GAAACAGTTTATAAACACAT+CGG - Chr4:63424128-63424147 MsG0480021719.01.T01:intron 25.0%
! GATGATTGAGAAATCAATTA+AGG - Chr4:63424033-63424052 MsG0480021719.01.T01:intron 25.0%
! GATGCTTATTACTCTATTTA+CGG + Chr4:63426628-63426647 None:intergenic 25.0%
! GTTGTAAAATATTGCCTATA+GGG - Chr4:63424869-63424888 MsG0480021719.01.T01:intron 25.0%
! TACAAAGTCATAAAGAAAGT+CGG + Chr4:63426650-63426669 None:intergenic 25.0%
! TGAACATAAGATATATAGCA+AGG + Chr4:63426512-63426531 None:intergenic 25.0%
! TGCAAATAATCAAAAGATTG+AGG + Chr4:63427905-63427924 None:intergenic 25.0%
! TTGTAAAATATTGCCTATAG+GGG - Chr4:63424870-63424889 MsG0480021719.01.T01:intron 25.0%
! TTTCAGTTTAGTGAAAATTG+CGG - Chr4:63423606-63423625 MsG0480021719.01.T01:intron 25.0%
!! ACTTCATTTGATTTAAACGT+AGG + Chr4:63427587-63427606 None:intergenic 25.0%
!! GAAAAAATTGGTAGTTAATG+GGG + Chr4:63424815-63424834 None:intergenic 25.0%
!! TCAATTTTCATATGTAACAG+AGG - Chr4:63427933-63427952 MsG0480021719.01.T01:intron 25.0%
!! TGTTTCTTAAGTGAGTTTTT+GGG + Chr4:63426008-63426027 None:intergenic 25.0%
!! TTTGTAGGCTTTAATTTACT+GGG - Chr4:63425912-63425931 MsG0480021719.01.T01:CDS 25.0%
!! TTTTTGCACTAAATAGCATA+TGG + Chr4:63424849-63424868 None:intergenic 25.0%
!!! AATGGAAGCATTATTAGATA+AGG + Chr4:63426826-63426845 None:intergenic 25.0%
!!! ATGGAAAAGTATCATAGATT+CGG + Chr4:63426300-63426319 None:intergenic 25.0%
!!! ATGTTTGATCTATGGTTTTA+TGG - Chr4:63428276-63428295 MsG0480021719.01.T01:five_prime_UTR 25.0%
!!! GTATTTTTATGTTCCATTGT+TGG - Chr4:63424006-63424025 MsG0480021719.01.T01:CDS 25.0%
!!! TCACAGTTATTTTTAGTTGT+TGG - Chr4:63427409-63427428 MsG0480021719.01.T01:intron 25.0%
!!! TGTTTAGTTTTGAGTTGTAA+GGG - Chr4:63423383-63423402 MsG0480021719.01.T01:three_prime_UTR 25.0%
!!! TTGTTTAGTTTTGAGTTGTA+AGG - Chr4:63423382-63423401 MsG0480021719.01.T01:three_prime_UTR 25.0%
!!! TTGTTTCTTAAGTGAGTTTT+TGG + Chr4:63426009-63426028 None:intergenic 25.0%
!!! TTTTGTAGGCTTTAATTTAC+TGG - Chr4:63425911-63425930 MsG0480021719.01.T01:CDS 25.0%
AAAAGCAGCTTAATTATGTG+TGG + Chr4:63423791-63423810 None:intergenic 30.0%
AACTGAAACTGAACAAAAAC+AGG + Chr4:63423594-63423613 None:intergenic 30.0%
AATTACCAAAGTTTATCCCT+TGG - Chr4:63425549-63425568 MsG0480021719.01.T01:intron 30.0%
AATTTAAAAATCCCAGTGAC+AGG + Chr4:63427442-63427461 None:intergenic 30.0%
ACAAAAACAGGAAAAAAGCT+TGG + Chr4:63423582-63423601 None:intergenic 30.0%
ACAATTAGATGAGGATTTAC+CGG + Chr4:63423366-63423385 None:intergenic 30.0%
ACCAAGATGAAATTAGTAGA+AGG + Chr4:63427667-63427686 None:intergenic 30.0%
ACCATTGTCAACATATAGAA+CGG + Chr4:63428016-63428035 None:intergenic 30.0%
AGAAACCCTAAATTTACATC+AGG + Chr4:63424382-63424401 None:intergenic 30.0%
ATGCTTGAGTAAAGAAACAT+AGG + Chr4:63426774-63426793 None:intergenic 30.0%
ATGTCCAGATCACTAAATAT+AGG + Chr4:63428069-63428088 None:intergenic 30.0%
ATTACCTGATGGTTCATTAA+TGG - Chr4:63425525-63425544 MsG0480021719.01.T01:intron 30.0%
ATTCAAACTGTTTGCATATG+TGG + Chr4:63424222-63424241 None:intergenic 30.0%
ATTGATGCTAAGTTGTTTGT+TGG - Chr4:63423969-63423988 MsG0480021719.01.T01:intron 30.0%
ATTTAAAAATCCCAGTGACA+GGG + Chr4:63427441-63427460 None:intergenic 30.0%
ATTTCCATTAATGAACCATC+AGG + Chr4:63425532-63425551 None:intergenic 30.0%
CAAGATGAAATTAGTAGAAG+GGG + Chr4:63427665-63427684 None:intergenic 30.0%
CAGTTTCCTGATGTAAATTT+AGG - Chr4:63424373-63424392 MsG0480021719.01.T01:intron 30.0%
CATATAGCAGATACATAGAA+AGG + Chr4:63428217-63428236 None:intergenic 30.0%
CATCGTATTAGAATTTGACT+AGG + Chr4:63426928-63426947 None:intergenic 30.0%
CATTTGGGTAATTAAGCATA+GGG - Chr4:63426365-63426384 MsG0480021719.01.T01:CDS 30.0%
CCAAGATGAAATTAGTAGAA+GGG + Chr4:63427666-63427685 None:intergenic 30.0%
GAAAGAAATTAATGCCTAGT+AGG - Chr4:63428349-63428368 MsG0480021719.01.T01:five_prime_UTR 30.0%
GAGAATTTAGTAGAAGTTGT+TGG + Chr4:63423326-63423345 None:intergenic 30.0%
GCGATATGCTATGAAAAAAT+TGG + Chr4:63424827-63424846 None:intergenic 30.0%
TAATACTTCATTAGAGTCCA+TGG + Chr4:63426417-63426436 None:intergenic 30.0%
TACATAAACAAACACAATGC+AGG + Chr4:63423554-63423573 None:intergenic 30.0%
TATAAGTGCTTATCCAAACA+AGG - Chr4:63424305-63424324 MsG0480021719.01.T01:intron 30.0%
TCAATCATCAAATCCAACAA+TGG + Chr4:63424022-63424041 None:intergenic 30.0%
TCACAGATCATACAAAATAG+CGG + Chr4:63424933-63424952 None:intergenic 30.0%
TCATTTGGGTAATTAAGCAT+AGG - Chr4:63426364-63426383 MsG0480021719.01.T01:CDS 30.0%
TGATAAAAAGAGAAGTCACA+AGG + Chr4:63427550-63427569 None:intergenic 30.0%
TGTAAAATATTGCCTATAGG+GGG - Chr4:63424871-63424890 MsG0480021719.01.T01:intron 30.0%
TTAATTGGCAATCCTGAAAT+TGG + Chr4:63424675-63424694 None:intergenic 30.0%
TTCAAGCAATGTACAGAATT+TGG + Chr4:63428325-63428344 None:intergenic 30.0%
TTGTTTGCGTAATCTTTATG+AGG - Chr4:63426855-63426874 MsG0480021719.01.T01:CDS 30.0%
! ATGATACTTTTCCATTCTCA+AGG - Chr4:63426305-63426324 MsG0480021719.01.T01:CDS 30.0%
! ATTTTCATATGTAACAGAGG+AGG - Chr4:63427936-63427955 MsG0480021719.01.T01:intron 30.0%
! CATTTGATTTAAACGTAGGA+AGG + Chr4:63427583-63427602 None:intergenic 30.0%
! GGATTGCCAATTAATTTGAA+AGG - Chr4:63424681-63424700 MsG0480021719.01.T01:intron 30.0%
! GTTTCTTAAGTGAGTTTTTG+GGG + Chr4:63426007-63426026 None:intergenic 30.0%
! TAAGAGCAACTAAAAGTATG+AGG + Chr4:63426091-63426110 None:intergenic 30.0%
! TTGTAGGCTTTAATTTACTG+GGG - Chr4:63425913-63425932 MsG0480021719.01.T01:CDS 30.0%
! TTTTCTGCTAGATATTTTGC+AGG - Chr4:63425887-63425906 MsG0480021719.01.T01:intron 30.0%
!! AAAAGACTTAAAGCCTTGTT+TGG + Chr4:63424321-63424340 None:intergenic 30.0%
!! TAACTGTGAACCATTTTTGT+AGG - Chr4:63425362-63425381 MsG0480021719.01.T01:intron 30.0%
!! TCCTATGTTTTCTAGAGATA+TGG - Chr4:63427036-63427055 MsG0480021719.01.T01:CDS 30.0%
!! TGGAAAAGTATCATAGATTC+GGG + Chr4:63426299-63426318 None:intergenic 30.0%
!!! AGCTTAATTCATGCTTTTTC+AGG - Chr4:63427464-63427483 MsG0480021719.01.T01:intron 30.0%
!!! TATTTGCTTCGCTTTTTTGT+AGG - Chr4:63428154-63428173 MsG0480021719.01.T01:five_prime_UTR 30.0%
!!! TTTTTGTCATATTGGCTTAG+TGG - Chr4:63423765-63423784 MsG0480021719.01.T01:intron 30.0%
AAATGATGATACAGATACGG+CGG - Chr4:63427322-63427341 MsG0480021719.01.T01:intron 35.0%
AACTGTCTTAAAACCCAACA+TGG + Chr4:63426223-63426242 None:intergenic 35.0%
ACAAATGACGATATCCAAGT+GGG + Chr4:63423854-63423873 None:intergenic 35.0%
ACCGTTCTATATGTTGACAA+TGG - Chr4:63428012-63428031 MsG0480021719.01.T01:intron 35.0%
AGCAAATACGAAACAGTATG+AGG + Chr4:63427639-63427658 None:intergenic 35.0%
AGCATAGGGTAATTTCTTTC+TGG - Chr4:63426379-63426398 MsG0480021719.01.T01:CDS 35.0%
AGCCTGTTCTATGTCTTTAT+TGG - Chr4:63426952-63426971 MsG0480021719.01.T01:CDS 35.0%
AGTGTTCTTTCATATTCTCC+TGG - Chr4:63425033-63425052 MsG0480021719.01.T01:intron 35.0%
ATCAAAAGATTGAGGTGAAC+TGG + Chr4:63427897-63427916 None:intergenic 35.0%
ATGTATAATACTCGTGACAG+TGG + Chr4:63425810-63425829 None:intergenic 35.0%
ATGTTCAGAGCCTACAAAAA+TGG + Chr4:63425375-63425394 None:intergenic 35.0%
ATTAGATAAGGTACATGCCT+GGG + Chr4:63426814-63426833 None:intergenic 35.0%
ATTGTCAAAAACAGCATCCA+AGG + Chr4:63425569-63425588 None:intergenic 35.0%
CAGTCCTATATTTAGTGATC+TGG - Chr4:63428062-63428081 MsG0480021719.01.T01:intron 35.0%
CATACCATACACATTGAAGA+TGG - Chr4:63424407-63424426 MsG0480021719.01.T01:intron 35.0%
CATCTATTGCTTACATCTTC+TGG + Chr4:63425604-63425623 None:intergenic 35.0%
CATCTTCAATGTGTATGGTA+TGG + Chr4:63424409-63424428 None:intergenic 35.0%
CCCTTCTACTAATTTCATCT+TGG - Chr4:63427663-63427682 MsG0480021719.01.T01:intron 35.0%
CGCAAACAAAAGCAATAGAA+TGG + Chr4:63426844-63426863 None:intergenic 35.0%
CTGAAAATAGCGTTATTTGC+AGG - Chr4:63425093-63425112 MsG0480021719.01.T01:intron 35.0%
GACAATGGTTTGAATGCTAT+GGG - Chr4:63428027-63428046 MsG0480021719.01.T01:intron 35.0%
GCATAGGGTAATTTCTTTCT+GGG - Chr4:63426380-63426399 MsG0480021719.01.T01:CDS 35.0%
GCCTGTTCTATGTCTTTATT+GGG - Chr4:63426953-63426972 MsG0480021719.01.T01:CDS 35.0%
GCGTAATCTTTATGAGGTTT+GGG - Chr4:63426861-63426880 MsG0480021719.01.T01:CDS 35.0%
GCTTAAAGATGAGTAGTTGA+AGG + Chr4:63426277-63426296 None:intergenic 35.0%
GTCACGAGTATTATACATGT+GGG - Chr4:63425812-63425831 MsG0480021719.01.T01:intron 35.0%
TAAGCATAATCAACATACCC+AGG + Chr4:63427246-63427265 None:intergenic 35.0%
TATTAGATAAGGTACATGCC+TGG + Chr4:63426815-63426834 None:intergenic 35.0%
TCAGTCGATACAAATTCACT+TGG - Chr4:63425265-63425284 MsG0480021719.01.T01:intron 35.0%
TGAAATTCTTCTTGGCACAT+GGG - Chr4:63425197-63425216 MsG0480021719.01.T01:intron 35.0%
TGACAATGGTTTGAATGCTA+TGG - Chr4:63428026-63428045 MsG0480021719.01.T01:intron 35.0%
TGCGTAATCTTTATGAGGTT+TGG - Chr4:63426860-63426879 MsG0480021719.01.T01:CDS 35.0%
TGTATCACTTACAAAAGGAG+TGG + Chr4:63425337-63425356 None:intergenic 35.0%
TGTCACGAGTATTATACATG+TGG - Chr4:63425811-63425830 MsG0480021719.01.T01:intron 35.0%
TTGTCAAAAACAGCATCCAA+GGG + Chr4:63425568-63425587 None:intergenic 35.0%
TTTCTTCCAATCATTAACCC+AGG - Chr4:63426794-63426813 MsG0480021719.01.T01:intron 35.0%
! AACTAGATCTCAAGCTCTTT+TGG - Chr4:63426461-63426480 MsG0480021719.01.T01:intron 35.0%
! GATATTTTGCAGGCTTTTGT+AGG - Chr4:63425897-63425916 MsG0480021719.01.T01:intron 35.0%
! GCCATATCTCTAGAAAACAT+AGG + Chr4:63427040-63427059 None:intergenic 35.0%
! GCTAAGTTGTTTGTTGGTAA+TGG - Chr4:63423975-63423994 MsG0480021719.01.T01:CDS 35.0%
! TAAGCACTTGTGAGACTTTT+AGG - Chr4:63424095-63424114 MsG0480021719.01.T01:intron 35.0%
! TCTTGGTCAAAATGCTCTTT+TGG - Chr4:63425784-63425803 MsG0480021719.01.T01:intron 35.0%
! TGTAGGCTTTAATTTACTGG+GGG - Chr4:63425914-63425933 MsG0480021719.01.T01:CDS 35.0%
! TTCAAACGTGGAGTCTATTT+TGG - Chr4:63423149-63423168 MsG0480021719.01.T01:three_prime_UTR 35.0%
! TTTTCCTTCAGATTACCTGA+TGG - Chr4:63425514-63425533 MsG0480021719.01.T01:intron 35.0%
!! ATGTTCATCACTCACTTTTC+AGG - Chr4:63426525-63426544 MsG0480021719.01.T01:intron 35.0%
!! GTTCGTGAATTTAGTTCTTG+TGG - Chr4:63427712-63427731 MsG0480021719.01.T01:intron 35.0%
!! TCATTTTTCTCCTACATTGC+CGG - Chr4:63423344-63423363 MsG0480021719.01.T01:three_prime_UTR 35.0%
!! TCTGGTGTCACATACTATAT+TGG - Chr4:63425950-63425969 MsG0480021719.01.T01:CDS 35.0%
!! TGATGATAATGGATACGGAT+GGG - Chr4:63425143-63425162 MsG0480021719.01.T01:intron 35.0%
!!! TGCTGTTTTTGACAATCTTG+AGG - Chr4:63425573-63425592 MsG0480021719.01.T01:intron 35.0%
!!! TTAGCTTTTGAGACTGAGTT+AGG - Chr4:63426902-63426921 MsG0480021719.01.T01:CDS 35.0%
AAAACAAACAAGCGCTATGC+TGG - Chr4:63425720-63425739 MsG0480021719.01.T01:intron 40.0%
AGACTACACTGTCTAAGTTG+GGG + Chr4:63428124-63428143 None:intergenic 40.0%
AGAGTCAACACTATATCTGC+TGG - Chr4:63427522-63427541 MsG0480021719.01.T01:intron 40.0%
AGCATCCAAGGGATAAACTT+TGG + Chr4:63425557-63425576 None:intergenic 40.0%
AGCGAAACAAGTCCAATTTC+AGG - Chr4:63424660-63424679 MsG0480021719.01.T01:intron 40.0%
AGCGAAGCAAATACTCTAAG+TGG + Chr4:63428147-63428166 None:intergenic 40.0%
AGTCAAAGACAGCAATATCC+AGG + Chr4:63425054-63425073 None:intergenic 40.0%
ATCTGCCAAAATTGCGACAA+AGG - Chr4:63424623-63424642 MsG0480021719.01.T01:intron 40.0%
CAAATGACGATATCCAAGTG+GGG + Chr4:63423853-63423872 None:intergenic 40.0%
CGTTGCCAACAGCTTAATTA+CGG + Chr4:63423882-63423901 None:intergenic 40.0%
CTAGTCCGTAATTAAGCTGT+TGG - Chr4:63423874-63423893 MsG0480021719.01.T01:intron 40.0%
CTGAAATTCTTCTTGGCACA+TGG - Chr4:63425196-63425215 MsG0480021719.01.T01:intron 40.0%
CTTATTAGCAAGACGTTGCA+TGG + Chr4:63425482-63425501 None:intergenic 40.0%
GAAATTAATGCCTAGTAGGG+TGG - Chr4:63428353-63428372 MsG0480021719.01.T01:five_prime_UTR 40.0%
GAATCCGTTAAGGAAGACTT+TGG - Chr4:63426556-63426575 MsG0480021719.01.T01:intron 40.0%
GACAAATGACGATATCCAAG+TGG + Chr4:63423855-63423874 None:intergenic 40.0%
GAGACTACACTGTCTAAGTT+GGG + Chr4:63428125-63428144 None:intergenic 40.0%
GCCCAATAAAGACATAGAAC+AGG + Chr4:63426957-63426976 None:intergenic 40.0%
GTCTCAAAAGCTAACTCAAG+AGG + Chr4:63426896-63426915 None:intergenic 40.0%
GTTACAAGGAACAATCCTGA+TGG + Chr4:63427870-63427889 None:intergenic 40.0%
TACATGCCTGGGTTAATGAT+TGG + Chr4:63426803-63426822 None:intergenic 40.0%
TACCTGTCTGACGTATTTGT+AGG - Chr4:63427174-63427193 MsG0480021719.01.T01:intron 40.0%
TACTCTATTTACGGTACCTC+TGG + Chr4:63426619-63426638 None:intergenic 40.0%
TCATATGTAACAGAGGAGGT+GGG - Chr4:63427940-63427959 MsG0480021719.01.T01:intron 40.0%
TCATCTCTCTTCCTTGAGAA+TGG + Chr4:63426319-63426338 None:intergenic 40.0%
TGAACCATCAGGTAATCTGA+AGG + Chr4:63425521-63425540 None:intergenic 40.0%
TGAATGAATACAACCCCACT+TGG - Chr4:63423837-63423856 MsG0480021719.01.T01:intron 40.0%
TGGTCTAGATTGCATTACTG+CGG - Chr4:63428296-63428315 MsG0480021719.01.T01:five_prime_UTR 40.0%
TTCATATGTAACAGAGGAGG+TGG - Chr4:63427939-63427958 MsG0480021719.01.T01:intron 40.0%
TTGCAGCAAGATATCCTTTC+CGG + Chr4:63426733-63426752 None:intergenic 40.0%
! ACACCAGAGTATTTCAAACG+TGG - Chr4:63423137-63423156 MsG0480021719.01.T01:three_prime_UTR 40.0%
! ACTCCACGTTTGAAATACTC+TGG + Chr4:63423143-63423162 None:intergenic 40.0%
! ATGATGATGTAAAGCTCCGT+TGG + Chr4:63424596-63424615 None:intergenic 40.0%
! CATTGCCTTTGTCGCAATTT+TGG + Chr4:63424631-63424650 None:intergenic 40.0%
! TCGGCAAACTTTTGTGATGA+AGG + Chr4:63424483-63424502 None:intergenic 40.0%
! TTGGTAGTTAATGGGGAACA+AGG + Chr4:63424808-63424827 None:intergenic 40.0%
! TTTAATTTACTGGGGGACCA+AGG - Chr4:63425921-63425940 MsG0480021719.01.T01:CDS 40.0%
!! CTGATGATAATGGATACGGA+TGG - Chr4:63425142-63425161 MsG0480021719.01.T01:intron 40.0%
!! GGAAGTGTCGAACAAATGTT+TGG + Chr4:63423252-63423271 None:intergenic 40.0%
!! GGTAAAAGAGCGTTTATTGC+TGG - Chr4:63425114-63425133 MsG0480021719.01.T01:intron 40.0%
!! GTGGCTGATGATAATGGATA+CGG - Chr4:63425138-63425157 MsG0480021719.01.T01:intron 40.0%
AAAGTCTCTACCACCCTACT+AGG + Chr4:63428366-63428385 None:intergenic 45.0%
AAATTTCCCACGTCGTAAGC+TGG + Chr4:63425406-63425425 None:intergenic 45.0%
AACCCCAAAAGCTAGCTCAA+GGG + Chr4:63427098-63427117 None:intergenic 45.0%
AAGAACCACAGTGCTCACAT+CGG + Chr4:63424502-63424521 None:intergenic 45.0%
AGTCGTGCTGCAAAAGCAAT+TGG - Chr4:63427770-63427789 MsG0480021719.01.T01:intron 45.0%
CACCTACAAATACGTCAGAC+AGG + Chr4:63427179-63427198 None:intergenic 45.0%
CAGCAGGTAACATTTCCATC+AGG - Chr4:63427852-63427871 MsG0480021719.01.T01:intron 45.0%
CATCAGAGAGGATCATTCCT+GGG - Chr4:63427226-63427245 MsG0480021719.01.T01:intron 45.0%
CTACAGAAAGAGCTATCAGC+AGG - Chr4:63427836-63427855 MsG0480021719.01.T01:intron 45.0%
CTGTCTGACGTATTTGTAGG+TGG - Chr4:63427177-63427196 MsG0480021719.01.T01:intron 45.0%
CTTGTCGTCACCTTTAGCAT+CGG - Chr4:63427978-63427997 MsG0480021719.01.T01:intron 45.0%
GAGTGGAATGCATACACAAC+AGG + Chr4:63425320-63425339 None:intergenic 45.0%
GATGTAAAGCTCCGTTGGAA+GGG + Chr4:63424591-63424610 None:intergenic 45.0%
GCTGATAGCTCTTTCTGTAG+AGG + Chr4:63427836-63427855 None:intergenic 45.0%
GCTGCCAAAGTCTTCCTTAA+CGG + Chr4:63426563-63426582 None:intergenic 45.0%
GCTGCCATCTTCAATGTGTA+TGG + Chr4:63424414-63424433 None:intergenic 45.0%
GCTGGAGCTGAAATTCTTCT+TGG - Chr4:63425189-63425208 MsG0480021719.01.T01:intron 45.0%
GGAAGTTGCTGAATCCGTTA+AGG - Chr4:63426546-63426565 MsG0480021719.01.T01:intron 45.0%
GGAATGCATACACAACAGGA+AGG + Chr4:63425316-63425335 None:intergenic 45.0%
GGAGACTACACTGTCTAAGT+TGG + Chr4:63428126-63428145 None:intergenic 45.0%
GGTGAACTGGTTGTGTTACA+AGG + Chr4:63427884-63427903 None:intergenic 45.0%
TAGTGATCTGGACATTCCCA+AGG - Chr4:63428074-63428093 MsG0480021719.01.T01:intron 45.0%
TCACATACATCGCATCAGAG+AGG - Chr4:63427214-63427233 MsG0480021719.01.T01:intron 45.0%
TGAGGATTTACCGGCAATGT+AGG + Chr4:63423357-63423376 None:intergenic 45.0%
TGATGTAAAGCTCCGTTGGA+AGG + Chr4:63424592-63424611 None:intergenic 45.0%
TGCAGCAAGATATCCTTTCC+GGG + Chr4:63426732-63426751 None:intergenic 45.0%
TGCTATATGCTCAGAAGAGC+AGG - Chr4:63428228-63428247 MsG0480021719.01.T01:five_prime_UTR 45.0%
TTTATTCCACGATCCCACCT+TGG + Chr4:63424535-63424554 None:intergenic 45.0%
TTTGCAGCACGACTTCTTAG+TGG + Chr4:63427764-63427783 None:intergenic 45.0%
! CTCTTTCTGTAGAGGTGCAT+TGG + Chr4:63427828-63427847 None:intergenic 45.0%
!! AAGAGCGTTTATTGCTGGTG+TGG - Chr4:63425119-63425138 MsG0480021719.01.T01:intron 45.0%
!! TCTGGGTGTTGAAGAATCCA+TGG - Chr4:63426397-63426416 MsG0480021719.01.T01:intron 45.0%
!!! ATATAATTTTTTTTTATTCT+TGG - Chr4:63425767-63425786 MsG0480021719.01.T01:CDS 5.0%
AACCCTGGGTGTGACAGATA+TGG - Chr4:63427006-63427025 MsG0480021719.01.T01:CDS 50.0%
AACTCGTGTCTCTTGCTTCC+AGG - Chr4:63427737-63427756 MsG0480021719.01.T01:intron 50.0%
ACCCATATCTGTCACACCCA+GGG + Chr4:63427011-63427030 None:intergenic 50.0%
ACCCCAAAAGCTAGCTCAAG+GGG + Chr4:63427097-63427116 None:intergenic 50.0%
ACCCTGGGTGTGACAGATAT+GGG - Chr4:63427007-63427026 MsG0480021719.01.T01:CDS 50.0%
AGTGTTCTAGCACCCCCTAT+AGG + Chr4:63424886-63424905 None:intergenic 50.0%
ATAGGTGACCAAACCACTGC+TGG - Chr4:63426700-63426719 MsG0480021719.01.T01:intron 50.0%
ATATCTGTCACACCCAGGGT+TGG + Chr4:63427007-63427026 None:intergenic 50.0%
ATCCAGCAAATGGACAGTCC+AGG - Chr4:63425743-63425762 MsG0480021719.01.T01:intron 50.0%
CAACCCCAAAAGCTAGCTCA+AGG + Chr4:63427099-63427118 None:intergenic 50.0%
CATTGGCAAGAGAGTGGACA+AGG + Chr4:63426594-63426613 None:intergenic 50.0%
CCTGTGATAGCCGATGCTAA+AGG + Chr4:63427991-63428010 None:intergenic 50.0%
CTTGTCCACTCTCTTGCCAA+TGG - Chr4:63426592-63426611 MsG0480021719.01.T01:intron 50.0%
GCAAAATCTCTTGCTGCAGC+TGG - Chr4:63425171-63425190 MsG0480021719.01.T01:intron 50.0%
GCATCAGAGAGGATCATTCC+TGG - Chr4:63427225-63427244 MsG0480021719.01.T01:intron 50.0%
GCTATGCTGGATCCAGCAAA+TGG - Chr4:63425733-63425752 MsG0480021719.01.T01:intron 50.0%
GCTGGTGTGGCTGATGATAA+TGG - Chr4:63425132-63425151 MsG0480021719.01.T01:intron 50.0%
GGTGCTTAATGCTGCTCCTT+GGG + Chr4:63428093-63428112 None:intergenic 50.0%
GGTTTGAATGCTATGGGCGT+TGG - Chr4:63428033-63428052 MsG0480021719.01.T01:intron 50.0%
GTGACACCAGACTAGTACCT+TGG + Chr4:63425941-63425960 None:intergenic 50.0%
TACCTGGACTGTCCATTTGC+TGG + Chr4:63425748-63425767 None:intergenic 50.0%
TAGCTACACTCTAACACGCG+CGG + Chr4:63423184-63423203 None:intergenic 50.0%
TGATGATACAGATACGGCGG+TGG - Chr4:63427325-63427344 MsG0480021719.01.T01:intron 50.0%
TGCGTACGAGAGGAAAGCTT+TGG + Chr4:63423273-63423292 None:intergenic 50.0%
TGGTGCTTAATGCTGCTCCT+TGG + Chr4:63428094-63428113 None:intergenic 50.0%
TTACGGTACCTCTGGTCCAT+TGG + Chr4:63426611-63426630 None:intergenic 50.0%
TTGAGTCCAGCTTACGACGT+GGG - Chr4:63425397-63425416 MsG0480021719.01.T01:intron 50.0%
TTGGCTTCTTCCCTGTCACT+GGG - Chr4:63427428-63427447 MsG0480021719.01.T01:intron 50.0%
TTTGAGTCCAGCTTACGACG+TGG - Chr4:63425396-63425415 MsG0480021719.01.T01:intron 50.0%
! GATGTGAGCACTGTGGTTCT+TGG - Chr4:63424501-63424520 MsG0480021719.01.T01:intron 50.0%
! GTCTAAGTTGGGGTGAGACT+TGG + Chr4:63428114-63428133 None:intergenic 50.0%
!! CCTTTAGCATCGGCTATCAC+AGG - Chr4:63427988-63428007 MsG0480021719.01.T01:intron 50.0%
!!! ACCCCTTGAGCTAGCTTTTG+GGG - Chr4:63427093-63427112 MsG0480021719.01.T01:five_prime_UTR 50.0%
!!! CACCCCTTGAGCTAGCTTTT+GGG - Chr4:63427092-63427111 MsG0480021719.01.T01:exon 50.0%
!!! CAGGTGCTTGCTTTTGAAGC+TGG - Chr4:63427483-63427502 MsG0480021719.01.T01:intron 50.0%
!!! TCACCCCTTGAGCTAGCTTT+TGG - Chr4:63427091-63427110 MsG0480021719.01.T01:exon 50.0%
AACCACTGCTGGAGACATCC+CGG - Chr4:63426711-63426730 MsG0480021719.01.T01:intron 55.0%
ACACCCAGGGTTGGACATGT+AGG + Chr4:63426998-63427017 None:intergenic 55.0%
ACACCCTACATGTCCAACCC+TGG - Chr4:63426991-63427010 MsG0480021719.01.T01:CDS 55.0%
AGTTCACTTGCGCGTGAGAC+GGG + Chr4:63423212-63423231 None:intergenic 55.0%
CAAGGGGTGACGATTGCTCA+AGG + Chr4:63427081-63427100 None:intergenic 55.0%
CACCCAGGGTTGGACATGTA+GGG + Chr4:63426997-63427016 None:intergenic 55.0%
CACCCTACATGTCCAACCCT+GGG - Chr4:63426992-63427011 MsG0480021719.01.T01:CDS 55.0%
CAGTTCACTTGCGCGTGAGA+CGG + Chr4:63423213-63423232 None:intergenic 55.0%
CTCTCTTGCCAATGGACCAG+AGG - Chr4:63426600-63426619 MsG0480021719.01.T01:intron 55.0%
CTGGTCCATTGGCAAGAGAG+TGG + Chr4:63426600-63426619 None:intergenic 55.0%
GACCCATATCTGTCACACCC+AGG + Chr4:63427012-63427031 None:intergenic 55.0%
GGATGTCTCCAGCAGTGGTT+TGG + Chr4:63426711-63426730 None:intergenic 55.0%
! GCACGACTTCTTAGTGGACC+TGG + Chr4:63427758-63427777 None:intergenic 55.0%
! GTTGGCTTCTTCCCTGTCAC+TGG - Chr4:63427427-63427446 MsG0480021719.01.T01:intron 55.0%
! GTTTGCCGATGTGAGCACTG+TGG - Chr4:63424494-63424513 MsG0480021719.01.T01:intron 55.0%
!! CTTGGTGCCAAGTCCAAGGT+GGG - Chr4:63424519-63424538 MsG0480021719.01.T01:intron 55.0%
!! GGTTCTTGGTGCCAAGTCCA+AGG - Chr4:63424515-63424534 MsG0480021719.01.T01:intron 55.0%
!! TCTTGGTGCCAAGTCCAAGG+TGG - Chr4:63424518-63424537 MsG0480021719.01.T01:intron 55.0%
CATCCGTGCAGCCCTTCCAA+CGG - Chr4:63424577-63424596 MsG0480021719.01.T01:intron 60.0%
CCAAGTCCAAGGTGGGATCG+TGG - Chr4:63424526-63424545 MsG0480021719.01.T01:intron 60.0%
CCACGATCCCACCTTGGACT+TGG + Chr4:63424529-63424548 None:intergenic 60.0%
CTGCTGGAGACATCCCGGAA+AGG - Chr4:63426716-63426735 MsG0480021719.01.T01:intron 60.0%
TTCCGGGATGTCTCCAGCAG+TGG + Chr4:63426716-63426735 None:intergenic 60.0%
! GGGGGACCAAGGTACTAGTC+TGG - Chr4:63425932-63425951 MsG0480021719.01.T01:CDS 60.0%
GCTCCGTTGGAAGGGCTGCA+CGG + Chr4:63424583-63424602 None:intergenic 65.0%
CGGCTGCTGCTGCGTACGAG+AGG + Chr4:63423283-63423302 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 63423132 63428386 63423132 ID=MsG0480021719.01;Name=MsG0480021719.01
Chr4 mRNA 63423132 63428386 63423132 ID=MsG0480021719.01.T01;Parent=MsG0480021719.01;Name=MsG0480021719.01.T01;_AED=0.34;_eAED=0.34;_QI=265|0.91|0.92|1|0.91|0.84|13|279|375
Chr4 exon 63428153 63428386 63428153 ID=MsG0480021719.01.T01:exon:20763;Parent=MsG0480021719.01.T01
Chr4 exon 63426816 63427123 63426816 ID=MsG0480021719.01.T01:exon:20764;Parent=MsG0480021719.01.T01
Chr4 exon 63426294 63426403 63426294 ID=MsG0480021719.01.T01:exon:20765;Parent=MsG0480021719.01.T01
Chr4 exon 63426079 63426134 63426079 ID=MsG0480021719.01.T01:exon:20766;Parent=MsG0480021719.01.T01
Chr4 exon 63425909 63425993 63425909 ID=MsG0480021719.01.T01:exon:20767;Parent=MsG0480021719.01.T01
Chr4 exon 63425754 63425801 63425754 ID=MsG0480021719.01.T01:exon:20768;Parent=MsG0480021719.01.T01
Chr4 exon 63424897 63424971 63424897 ID=MsG0480021719.01.T01:exon:20769;Parent=MsG0480021719.01.T01
Chr4 exon 63424754 63424814 63424754 ID=MsG0480021719.01.T01:exon:20770;Parent=MsG0480021719.01.T01
Chr4 exon 63424271 63424322 63424271 ID=MsG0480021719.01.T01:exon:20771;Parent=MsG0480021719.01.T01
Chr4 exon 63424131 63424182 63424131 ID=MsG0480021719.01.T01:exon:20772;Parent=MsG0480021719.01.T01
Chr4 exon 63423975 63424032 63423975 ID=MsG0480021719.01.T01:exon:20773;Parent=MsG0480021719.01.T01
Chr4 exon 63423661 63423759 63423661 ID=MsG0480021719.01.T01:exon:20774;Parent=MsG0480021719.01.T01
Chr4 exon 63423132 63423565 63423132 ID=MsG0480021719.01.T01:exon:20775;Parent=MsG0480021719.01.T01
Chr4 five_prime_UTR 63428153 63428386 63428153 ID=MsG0480021719.01.T01:five_prime_utr;Parent=MsG0480021719.01.T01
Chr4 five_prime_UTR 63427093 63427123 63427093 ID=MsG0480021719.01.T01:five_prime_utr;Parent=MsG0480021719.01.T01
Chr4 CDS 63426816 63427092 63426816 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63426294 63426403 63426294 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63426079 63426134 63426079 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63425909 63425993 63425909 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63425754 63425801 63425754 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63424897 63424971 63424897 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63424754 63424814 63424754 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63424271 63424322 63424271 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63424131 63424182 63424131 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63423975 63424032 63423975 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63423661 63423759 63423661 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 CDS 63423411 63423565 63423411 ID=MsG0480021719.01.T01:cds;Parent=MsG0480021719.01.T01
Chr4 three_prime_UTR 63423132 63423410 63423132 ID=MsG0480021719.01.T01:three_prime_utr;Parent=MsG0480021719.01.T01
Gene Sequence

>MsG0480021719.01.T01

ATGGCAGCAACATCTATTTCAAGCTTGCAAATTGCAATGTCAAGATCATGCGTTCCTTCATCACAAAAGTTTGCCGATGTGAGCACTGTGGTTCTTGGTGCCAAGTCCAAGGTGGGATCGTGGAATAAACTTGCAAGTGCATGTCACGTTGCATCCGTGCAGCCCTTCCAACGGAGCTTTACATCATCATCTGTGAAATCTGCCAAAATTGCGACAAAGGCAATGTCTGAGTCTAGCGAAACAAGTCCAATTTCAGGATTGCCAATTAATTTGAAAGGTAAAAGAGCGTTTATTGCTGGTGTGGCTGATGATAATGGATACGGATGGGCAATTGCAAAATCTCTTGCTGCAGCTGGAGCTGAAATTCTTCTTGGCACATGGGTTCCTGCTCTGAACATTTTTGAGTCCAGCTTACGACGTGGGAAATTTGACGAATCACGAGTATTACCTGATGGTTCATTAATGGAAATTACCAAAGTTTATCCCTTGGATGCTGTTTTTGACAATCTTGAGGATGTTCCAGAAGATATAAAAACAAACAAGCGCTATGCTGGATCCAGCAAATGGACAGTCCAGGAAGTTGCTGAATCCGTTAAGGAAGACTTTGGCAGCATAGACATCCTTGTCCACTCTCTTGCCAATGGACCAGAGGTGACCAAACCACTGCTGGAGACATCCCGGAAAGGATATCTTGCTGCAATATCTGCATCTAGTGGATCTTCAATTTCTCTCACATACATCGCATCAGAGAGGATCATTCCTGGATACGGCGGTGGCATGAGTTCTGCAAAAGCTGCACTAGAAAGTGATACACGAGTGCTTGCTTTTGAAGCTGGTAGAAAGCGCAAAATTAGAGTCAACACTATATCTGCTGGTCCACTAAGAAGTCGTGCTGCAAAAGCAATTGGATTCATTGATATGATGATTGATTACTCAATAGCCAATGCACCTCTACAGAAAGAGCTATCAGCAGAGGAGGTGGGCAACGCAGCTGCTTTCTTGTCGTCACCTTTAGCATCGGCTATCACAGGTACCGTTCTATATGTTGACAATGGTTTGAATGCTATGGGCGTTGGAGTTGACAGTCCTATATTTAGTGATCTGGACATTCCCAAGGAGCAGCATTAA
Protein sequence

>MsG0480021719.01.T01

MAATSISSLQIAMSRSCVPSSQKFADVSTVVLGAKSKVGSWNKLASACHVASVQPFQRSFTSSSVKSAKIATKAMSESSETSPISGLPINLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILLGTWVPALNIFESSLRRGKFDESRVLPDGSLMEITKVYPLDAVFDNLEDVPEDIKTNKRYAGSSKWTVQEVAESVKEDFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRKIRVNTISAGPLRSRAAKAIGFIDMMIDYSIANAPLQKELSAEEVGNAAAFLSSPLASAITGTVLYVDNGLNAMGVGVDSPIFSDLDIPKEQH*