AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000275.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000275.01.T01 MTR_1g019280 88.476 269 5 2 9 253 75 341 2.07e-167 475
MsG0180000275.01.T01 MTR_1g019280 88.476 269 5 2 9 253 137 403 1.94e-166 475
MsG0180000275.01.T01 MTR_5g017290 44.595 148 61 8 70 207 2 138 2.78e-22 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000275.01.T01 AT1G45207 44.776 268 101 11 6 249 100 344 7.27e-53 181
MsG0180000275.01.T01 AT1G45207 45.627 263 96 11 11 249 106 345 1.31e-52 180
MsG0180000275.01.T01 AT4G36970 46.789 109 31 6 80 171 12 110 3.30e-13 69.7

Find 126 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCCATGCGCGGTGATTT+TGG 0.184874 1:-3687863 None:intergenic
GGAGAACGTTGCCGTCTAAA+TGG 0.214560 1:+3686104 MsG0180000275.01.T01:CDS
AGCTACCCTCTGGGCTCATC+TGG 0.267123 1:-3687047 None:intergenic
TGTAAGTTATGCAAATTTAA+TGG 0.289573 1:-3689002 None:intergenic
AATGCTAATGCAACTGGAAT+TGG 0.310682 1:+3685848 MsG0180000275.01.T01:CDS
GCATTAACAGCAGCAGAAAA+AGG 0.359752 1:-3686319 None:intergenic
CACCATTACCAACTTGCTTC+CGG 0.360198 1:-3686057 None:intergenic
TGACGATAATTCGGAGTTCC+AGG 0.366291 1:-3685974 None:intergenic
AGAGAAAGAAGTCCTCATAT+TGG 0.380866 1:-3687082 None:intergenic
GGCTTCCTCCCTTTAGCCAT+GGG 0.383806 1:-3687842 None:intergenic
GATGGGTTTACAAATAGTTC+TGG 0.388906 1:+3686349 MsG0180000275.01.T01:CDS
GGAGAAGTTTGATGCTTTCA+AGG 0.390085 1:+3686975 MsG0180000275.01.T01:exon
TCTGGTGGCAATGGTGGTGG+AGG 0.393951 1:+3686367 MsG0180000275.01.T01:CDS
TATGGTTCAGACTAGGAAAT+CGG 0.396156 1:+3685913 MsG0180000275.01.T01:CDS
CTGAACAATGCTAATGCAAC+TGG 0.402251 1:+3685842 MsG0180000275.01.T01:CDS
TCGGGAACGGGTACAGTGAC+GGG 0.403774 1:+3685932 MsG0180000275.01.T01:CDS
ATGGGACAAACAAAATTTAC+TGG 0.405905 1:-3687824 None:intergenic
CTGCGTTGTGTTTAAGTAAT+GGG 0.406242 1:+3686083 MsG0180000275.01.T01:CDS
GAGAAAGAAGTCCTCATATT+GGG 0.411403 1:-3687081 None:intergenic
TTTGTTTGTCCCATGGCTAA+AGG 0.424577 1:+3687833 MsG0180000275.01.T01:three_prime_UTR
GCTGTTAATGCCTCAGCTGA+TGG 0.434402 1:+3686331 MsG0180000275.01.T01:CDS
CCTTGACAATGACGATAATT+CGG 0.435234 1:-3685983 None:intergenic
GGTTCTTCCCCTCGATTAGT+TGG 0.437388 1:+3685875 MsG0180000275.01.T01:CDS
TGGCTTCCTCCCTTTAGCCA+TGG 0.437855 1:-3687843 None:intergenic
TTGTTTGTCCCATGGCTAAA+GGG 0.439068 1:+3687834 MsG0180000275.01.T01:three_prime_UTR
TGGAGCTATGAAGAAGAGTA+TGG 0.441511 1:+3685895 MsG0180000275.01.T01:CDS
GGTGGTGTTGCAATGCAAAA+AGG 0.444448 1:+3686004 MsG0180000275.01.T01:CDS
TATCAACATCACAGTTCAAA+AGG 0.454031 1:+3685555 MsG0180000275.01.T01:CDS
TGAAGACGGAAATCAACTTT+CGG 0.459392 1:+3685597 MsG0180000275.01.T01:CDS
TATTCGTTGTATTCGCCTGC+AGG 0.459546 1:+3686256 MsG0180000275.01.T01:CDS
TCGGCAAATCTGTGACGGGC+AGG 0.462087 1:-3687122 None:intergenic
CAAAACCCATGGATAAGATT+CGG 0.463466 1:-3688937 None:intergenic
CTGTTAATGCCTCAGCTGAT+GGG 0.464443 1:+3686332 MsG0180000275.01.T01:CDS
AATTTAATGGCAAGTAGGTA+AGG 0.468149 1:-3688989 None:intergenic
ACATGGATGCTCTCAGATGC+AGG 0.472253 1:+3686435 MsG0180000275.01.T01:CDS
ACGGGTACAGTGACGGGGAC+TGG 0.473096 1:+3685938 MsG0180000275.01.T01:CDS
GAGGAGCATGAGCTACCCTC+TGG 0.483081 1:-3687057 None:intergenic
AAATCTGTGACGGGCAGGGA+AGG 0.484691 1:-3687117 None:intergenic
CGCATGGGAAAATTTGCAAA+AGG 0.488424 1:+3687875 MsG0180000275.01.T01:three_prime_UTR
AATGCAACTGGAATTGGAAC+TGG 0.488888 1:+3685854 MsG0180000275.01.T01:CDS
GAGAACGTTGCCGTCTAAAT+GGG 0.489634 1:+3686105 MsG0180000275.01.T01:CDS
AGCGGACCACTCTTCGACTT+AGG 0.491435 1:-3686211 None:intergenic
TTAGGTCTCCTCAGTGGCTG+TGG 0.494524 1:-3686193 None:intergenic
GTTTGATGCTTTCAAGGATG+CGG 0.497959 1:+3686981 MsG0180000275.01.T01:three_prime_UTR
ATGCAAATTTAATGGCAAGT+AGG 0.498312 1:-3688994 None:intergenic
ACTGGTACATTTCCGAGTCC+TGG 0.500376 1:+3685956 MsG0180000275.01.T01:CDS
AGTGGTCCGCTTGGTCCACC+TGG 0.500934 1:+3686223 MsG0180000275.01.T01:CDS
TACATCCGAATCTTATCCAT+GGG 0.503558 1:+3688932 MsG0180000275.01.T01:three_prime_UTR
GAAGCCAAAATCACCGCGCA+TGG 0.504615 1:+3687859 MsG0180000275.01.T01:three_prime_UTR
CTGGTGGCAATGGTGGTGGA+GGG 0.506953 1:+3686368 MsG0180000275.01.T01:CDS
AGTTCTGGTGGCAATGGTGG+TGG 0.506963 1:+3686364 MsG0180000275.01.T01:CDS
GGCCGGAAGCAAGTTGGTAA+TGG 0.508505 1:+3686055 MsG0180000275.01.T01:CDS
ATGTCCCTTCTTGAAACAGC+AGG 0.512484 1:-3687018 None:intergenic
TCACAACTCAAAACTAGATA+AGG 0.513916 1:-3686526 None:intergenic
TGCTGTTTCAAGAAGGGACA+TGG 0.513995 1:+3687020 MsG0180000275.01.T01:three_prime_UTR
ACAAATAGTTCTGGTGGCAA+TGG 0.516869 1:+3686358 MsG0180000275.01.T01:CDS
GCTCGCTCAGTTAGTGTACA+TGG 0.518862 1:+3686418 MsG0180000275.01.T01:CDS
AAGATTAGCATAACAACCTC+GGG 0.520916 1:-3686476 None:intergenic
AGTTCTGAGCGAGTTGTAAG+TGG 0.522590 1:+3686031 MsG0180000275.01.T01:CDS
GCTACCCTCTGGGCTCATCT+GGG 0.523399 1:-3687046 None:intergenic
CAGACTAGGAAATCGGGAAC+GGG 0.526664 1:+3685920 MsG0180000275.01.T01:CDS
CATGCTCCTCTCCCAATATG+AGG 0.528342 1:+3687070 MsG0180000275.01.T01:three_prime_UTR
ATGGTTCAGACTAGGAAATC+GGG 0.530303 1:+3685914 MsG0180000275.01.T01:CDS
TTTGATGCTTTCAAGGATGC+GGG 0.530327 1:+3686982 MsG0180000275.01.T01:three_prime_UTR
TTACATCCGAATCTTATCCA+TGG 0.533458 1:+3688931 MsG0180000275.01.T01:three_prime_UTR
ATCGGGAACGGGTACAGTGA+CGG 0.542516 1:+3685931 MsG0180000275.01.T01:CDS
GTTCTGAGCGAGTTGTAAGT+GGG 0.543456 1:+3686032 MsG0180000275.01.T01:CDS
TCTGTGACGGGCAGGGAAGG+TGG 0.550611 1:-3687114 None:intergenic
TATCCCCTGCTGTTTCAAGA+AGG 0.551655 1:+3687013 MsG0180000275.01.T01:three_prime_UTR
GACGGGCAGGGAAGGTGGAG+TGG 0.556016 1:-3687109 None:intergenic
CGGCAAATCTGTGACGGGCA+GGG 0.556288 1:-3687121 None:intergenic
TGAAACAGCAGGGGATACAT+TGG 0.561049 1:-3687007 None:intergenic
TCCGCATCTTCCCATTTAGA+CGG 0.561076 1:-3686115 None:intergenic
ACTGCGTTGTGTTTAAGTAA+TGG 0.567379 1:+3686082 MsG0180000275.01.T01:CDS
CACACGAACGGATCCTTGCA+TGG 0.568343 1:+3686396 MsG0180000275.01.T01:CDS
AGAAGTCCTCATATTGGGAG+AGG 0.571056 1:-3687076 None:intergenic
TCAGACTAGGAAATCGGGAA+CGG 0.573486 1:+3685919 MsG0180000275.01.T01:CDS
CTTGAGGCTATCAAAACCCA+TGG 0.574188 1:-3688948 None:intergenic
AGTGACATTGATTCTGAAGA+CGG 0.574323 1:+3685583 MsG0180000275.01.T01:CDS
TTCATAGCTCCAACTAATCG+AGG 0.574579 1:-3685884 None:intergenic
TAATTCGGAGTTCCAGGACT+CGG 0.576781 1:-3685968 None:intergenic
CATGCAAGGATCCGTTCGTG+TGG 0.580587 1:-3686395 None:intergenic
TAAGATTAGCATAACAACCT+CGG 0.589191 1:-3686477 None:intergenic
AATGGGAAGATGCGGAGAGG+TGG 0.589464 1:+3686122 MsG0180000275.01.T01:CDS
CCGAATTATCGTCATTGTCA+AGG 0.589710 1:+3685983 MsG0180000275.01.T01:CDS
TCATAGCTCCAACTAATCGA+GGG 0.590491 1:-3685883 None:intergenic
TAAGATTCGGATGTAAGAGA+AGG 0.592519 1:-3688924 None:intergenic
AAGCCAAAATCACCGCGCAT+GGG 0.592582 1:+3687860 MsG0180000275.01.T01:three_prime_UTR
GGCACCCAGATGAGCCCAGA+GGG 0.592710 1:+3687042 MsG0180000275.01.T01:three_prime_UTR
ATACTCGGCAAATCTGTGAC+GGG 0.593313 1:-3687126 None:intergenic
AGGAGCATGAGCTACCCTCT+GGG 0.594386 1:-3687056 None:intergenic
ATCCCCTGCTGTTTCAAGAA+GGG 0.596120 1:+3687014 MsG0180000275.01.T01:three_prime_UTR
GGGTTTACAAATAGTTCTGG+TGG 0.601682 1:+3686352 MsG0180000275.01.T01:CDS
ATTTAATGGCAAGTAGGTAA+GGG 0.603397 1:-3688988 None:intergenic
AAGTCGAAGAGTGGTCCGCT+TGG 0.609344 1:+3686214 MsG0180000275.01.T01:CDS
TGTCCCTTCTTGAAACAGCA+GGG 0.612941 1:-3687017 None:intergenic
TGGAGGGCTTCCCACACGAA+CGG 0.615766 1:+3686384 MsG0180000275.01.T01:CDS
AACGAATAATACGCAACACC+AGG 0.618153 1:-3686241 None:intergenic
CTAACTGAGCGAGCCATGCA+AGG 0.618650 1:-3686409 None:intergenic
AGAAGAGTATGGTTCAGACT+AGG 0.619003 1:+3685906 MsG0180000275.01.T01:CDS
TCTTTCTCTCTAGCACTCAA+AGG 0.621209 1:+3685640 MsG0180000275.01.T01:CDS
CGGGAACGGGTACAGTGACG+GGG 0.623331 1:+3685933 MsG0180000275.01.T01:CDS
AATAGTTCTGGTGGCAATGG+TGG 0.623434 1:+3686361 MsG0180000275.01.T01:CDS
TTCTGAGCGAGTTGTAAGTG+GGG 0.623568 1:+3686033 MsG0180000275.01.T01:CDS
GCCGTCTAAATGGGAAGATG+CGG 0.624201 1:+3686114 MsG0180000275.01.T01:CDS
GATACTCGGCAAATCTGTGA+CGG 0.626342 1:-3687127 None:intergenic
GAATAATACGCAACACCAGG+TGG 0.633920 1:-3686238 None:intergenic
GAGCAGCAATACAGAAACAG+AGG 0.636096 1:+3687905 MsG0180000275.01.T01:three_prime_UTR
ATAGTAATTTAGTAAACTTG+AGG 0.638287 1:-3688964 None:intergenic
CAATCGTCGATTCCTTCCCG+AGG 0.641783 1:+3686460 MsG0180000275.01.T01:CDS
CATGGATGCTCTCAGATGCA+GGG 0.641801 1:+3686436 MsG0180000275.01.T01:CDS
TTAGCATAACAACCTCGGGA+AGG 0.645636 1:-3686472 None:intergenic
ATGCAAGGATCCGTTCGTGT+GGG 0.646814 1:-3686394 None:intergenic
ATTTGTAAACCCATCAGCTG+AGG 0.649726 1:-3686341 None:intergenic
TTTGTCCCATGGCTAAAGGG+AGG 0.654755 1:+3687837 MsG0180000275.01.T01:three_prime_UTR
GCAACACCAGGTGGACCAAG+CGG 0.656850 1:-3686229 None:intergenic
TCTGAGCGAGTTGTAAGTGG+GGG 0.659759 1:+3686034 MsG0180000275.01.T01:CDS
AGGAGACCTAAGTCGAAGAG+TGG 0.659853 1:+3686205 MsG0180000275.01.T01:CDS
GTCCCTTCTTGAAACAGCAG+GGG 0.661080 1:-3687016 None:intergenic
CATAGCTCCAACTAATCGAG+GGG 0.663654 1:-3685882 None:intergenic
GCTGTTTCAAGAAGGGACAT+GGG 0.673995 1:+3687021 MsG0180000275.01.T01:three_prime_UTR
AATTATCGTCATTGTCAAGG+TGG 0.691775 1:+3685986 MsG0180000275.01.T01:CDS
TTTCAGTTCCACAGCCACTG+AGG 0.695040 1:+3686185 MsG0180000275.01.T01:CDS
CTAAATGGGAAGATGCGGAG+AGG 0.704130 1:+3686119 MsG0180000275.01.T01:CDS
TTCGACTTAGGTCTCCTCAG+TGG 0.720239 1:-3686199 None:intergenic
GGGCACCCAGATGAGCCCAG+AGG 0.743811 1:+3687041 MsG0180000275.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATCTTAATTTCATTT+TGG + Chr1:3688016-3688035 MsG0180000275.01.T01:intron 10.0%
!!! ATTACTTTCCTTTATTTTTA+AGG - Chr1:3688369-3688388 None:intergenic 15.0%
!!! TAAAGAATTTTCTATTTTCT+AGG - Chr1:3687713-3687732 None:intergenic 15.0%
!!! TACATAATTTAGAATTTGAA+GGG + Chr1:3688775-3688794 MsG0180000275.01.T01:intron 15.0%
!! ATAGTAATTTAGTAAACTTG+AGG - Chr1:3688967-3688986 None:intergenic 20.0%
!! TAAGATAAATATGTGTATGT+AGG - Chr1:3688007-3688026 None:intergenic 20.0%
!! TATGATGAAGTAAAAAAAAG+TGG - Chr1:3688274-3688293 None:intergenic 20.0%
!!! CTACATAATTTAGAATTTGA+AGG + Chr1:3688774-3688793 MsG0180000275.01.T01:intron 20.0%
!!! TCTTTATATGACATTGATTT+CGG - Chr1:3687433-3687452 None:intergenic 20.0%
!!! TTTAGAATTTTAATATGCTC+TGG + Chr1:3686681-3686700 MsG0180000275.01.T01:intron 20.0%
! ACTCCAACATATAAATTTCA+AGG - Chr1:3687539-3687558 None:intergenic 25.0%
! ATTCATTAAATCAGAGTCTT+TGG + Chr1:3686728-3686747 MsG0180000275.01.T01:intron 25.0%
! CCTGAAATAAAAGAAAACAA+GGG - Chr1:3688048-3688067 None:intergenic 25.0%
! CTACCTTGAAATTTATATGT+TGG + Chr1:3687533-3687552 MsG0180000275.01.T01:intron 25.0%
! CTGAAATAAAAGAAAACAAG+GGG - Chr1:3688047-3688066 None:intergenic 25.0%
! GCTTATTTAATAAGCAAGAT+CGG + Chr1:3685798-3685817 MsG0180000275.01.T01:intron 25.0%
! TAATAAAAATCCCTTCAAGT+GGG - Chr1:3687941-3687960 None:intergenic 25.0%
! TTATTACCACCTTTCAAATA+TGG + Chr1:3687659-3687678 MsG0180000275.01.T01:intron 25.0%
! TTTGTTCATAATCTTATCCA+TGG - Chr1:3688461-3688480 None:intergenic 25.0%
!!! AAAACTCATATTACTGACTT+AGG + Chr1:3687770-3687789 MsG0180000275.01.T01:intron 25.0%
!!! CACTAAATTTGCTATGTTAT+TGG + Chr1:3687582-3687601 MsG0180000275.01.T01:intron 25.0%
!!! CCTTGTTTTCTTTTATTTCA+GGG + Chr1:3688046-3688065 MsG0180000275.01.T01:intron 25.0%
!!! GAGTTGTGTTTTTTTGTATT+TGG + Chr1:3685740-3685759 MsG0180000275.01.T01:intron 25.0%
!!! TATGTTTTGAATCTGATTTG+CGG + Chr1:3686781-3686800 MsG0180000275.01.T01:intron 25.0%
!!! TATTGACTTGCTTTACTATT+GGG + Chr1:3688127-3688146 MsG0180000275.01.T01:intron 25.0%
!!! TCCTTTATTTTTAAGGAGAA+GGG - Chr1:3688362-3688381 None:intergenic 25.0%
!!! TTCCTTTATTTTTAAGGAGA+AGG - Chr1:3688363-3688382 None:intergenic 25.0%
!!! TTTCTCTAAAATGGATATCA+GGG + Chr1:3687157-3687176 MsG0180000275.01.T01:intron 25.0%
!!! TTTTCTAGGTTGAATTGAAT+AGG - Chr1:3687699-3687718 None:intergenic 25.0%
AAACTTCTCCTCTGTAAATT+GGG - Chr1:3686965-3686984 None:intergenic 30.0%
AATTTAATGGCAAGTAGGTA+AGG - Chr1:3688992-3689011 None:intergenic 30.0%
AGAGTCTTTGGATGAAAATT+GGG + Chr1:3686740-3686759 MsG0180000275.01.T01:intron 30.0%
ATAAATTTCAAGGTAGCTCA+TGG - Chr1:3687529-3687548 None:intergenic 30.0%
ATGCAAATTTAATGGCAAGT+AGG - Chr1:3688997-3689016 None:intergenic 30.0%
ATGGGACAAACAAAATTTAC+TGG - Chr1:3687827-3687846 None:intergenic 30.0%
ATTTAATGGCAAGTAGGTAA+GGG - Chr1:3688991-3689010 None:intergenic 30.0%
CAATCAGTACCATATTTGAA+AGG - Chr1:3687671-3687690 None:intergenic 30.0%
CCCTGAAATAAAAGAAAACA+AGG - Chr1:3688049-3688068 None:intergenic 30.0%
CTGTATTAACTATTGTGATG+TGG + Chr1:3686610-3686629 MsG0180000275.01.T01:intron 30.0%
CTTCACATAACCTAAAACTA+TGG - Chr1:3688821-3688840 None:intergenic 30.0%
GATTGTATGCTAATTATTCG+TGG + Chr1:3688708-3688727 MsG0180000275.01.T01:intron 30.0%
GTAATAAAAATCCCTTCAAG+TGG - Chr1:3687942-3687961 None:intergenic 30.0%
TAAGATTAGCATAACAACCT+CGG - Chr1:3686480-3686499 None:intergenic 30.0%
TAGCATACAATCATCTTACT+AGG - Chr1:3688700-3688719 None:intergenic 30.0%
TATCAACATCACAGTTCAAA+AGG + Chr1:3685555-3685574 MsG0180000275.01.T01:CDS 30.0%
TCACAACTCAAAACTAGATA+AGG - Chr1:3686529-3686548 None:intergenic 30.0%
TCACATATCTAAACATGACA+TGG - Chr1:3686885-3686904 None:intergenic 30.0%
TCCCTTCTCCTTAAAAATAA+AGG + Chr1:3688358-3688377 MsG0180000275.01.T01:intron 30.0%
TGGATTAAGAATGTCAAGAT+CGG + Chr1:3685760-3685779 MsG0180000275.01.T01:intron 30.0%
! GCATAATAGTTTTCATAACG+TGG - Chr1:3686833-3686852 None:intergenic 30.0%
! TAATATGAGTTTTCTCAGCA+TGG - Chr1:3687763-3687782 None:intergenic 30.0%
! TGTCATTGTACCATAGTTTT+AGG + Chr1:3688808-3688827 MsG0180000275.01.T01:intron 30.0%
! TTTAGGTTATGTGAAGTGTA+AGG + Chr1:3688825-3688844 MsG0180000275.01.T01:intron 30.0%
! TTTTCCCCTAAGTTCAATTT+CGG + Chr1:3688086-3688105 MsG0180000275.01.T01:intron 30.0%
!! AGTAAATTTTGTTTGTCCCA+TGG + Chr1:3687826-3687845 MsG0180000275.01.T01:three_prime_UTR 30.0%
!! CTATTGACTTGCTTTACTAT+TGG + Chr1:3688126-3688145 MsG0180000275.01.T01:intron 30.0%
!! CTTTCTCTAAAATGGATATC+AGG + Chr1:3687156-3687175 MsG0180000275.01.T01:intron 30.0%
!! TTTGCTATTTCAGATGAAGT+TGG + Chr1:3688417-3688436 MsG0180000275.01.T01:intron 30.0%
!!! CCCTTGTTTTCTTTTATTTC+AGG + Chr1:3688045-3688064 MsG0180000275.01.T01:intron 30.0%
AAGATTAGCATAACAACCTC+GGG - Chr1:3686479-3686498 None:intergenic 35.0%
AATGCTAATGCAACTGGAAT+TGG + Chr1:3685848-3685867 MsG0180000275.01.T01:CDS 35.0%
AATTATCGTCATTGTCAAGG+TGG + Chr1:3685986-3686005 MsG0180000275.01.T01:CDS 35.0%
AATTGAACTTAGGGGAAAAG+AGG - Chr1:3688085-3688104 None:intergenic 35.0%
ACAATCATCTTACTAGGACA+AGG - Chr1:3688694-3688713 None:intergenic 35.0%
ACTGAAATTCGCTCAGAAAA+AGG + Chr1:3688480-3688499 MsG0180000275.01.T01:intron 35.0%
ACTGCGTTGTGTTTAAGTAA+TGG + Chr1:3686082-3686101 MsG0180000275.01.T01:CDS 35.0%
AGAGAAAGAAGTCCTCATAT+TGG - Chr1:3687085-3687104 None:intergenic 35.0%
AGTGACCGAAATTGAACTTA+GGG - Chr1:3688094-3688113 None:intergenic 35.0%
ATGTAGGAGCAATAATTGCT+TGG - Chr1:3687991-3688010 None:intergenic 35.0%
ATTACTGTGGTGCTTCTAAT+AGG + Chr1:3688229-3688248 MsG0180000275.01.T01:intron 35.0%
CAAAACCCATGGATAAGATT+CGG - Chr1:3688940-3688959 None:intergenic 35.0%
CAAACTTCTCCTCTGTAAAT+TGG - Chr1:3686966-3686985 None:intergenic 35.0%
CAGAGTCTTTGGATGAAAAT+TGG + Chr1:3686739-3686758 MsG0180000275.01.T01:intron 35.0%
CCTTGACAATGACGATAATT+CGG - Chr1:3685986-3686005 None:intergenic 35.0%
CTGCGTTGTGTTTAAGTAAT+GGG + Chr1:3686083-3686102 MsG0180000275.01.T01:CDS 35.0%
GAATGCTGTAGAAGCTTAAA+AGG - Chr1:3688632-3688651 None:intergenic 35.0%
GAGAAAGAAGTCCTCATATT+GGG - Chr1:3687084-3687103 None:intergenic 35.0%
TAAACAAAGACCCACTTGAA+GGG + Chr1:3687928-3687947 MsG0180000275.01.T01:intron 35.0%
TAAGATTCGGATGTAAGAGA+AGG - Chr1:3688927-3688946 None:intergenic 35.0%
TACATCCGAATCTTATCCAT+GGG + Chr1:3688932-3688951 MsG0180000275.01.T01:three_prime_UTR 35.0%
TAGTGACCGAAATTGAACTT+AGG - Chr1:3688095-3688114 None:intergenic 35.0%
TATATCATGTCGCAGAAGTA+TGG - Chr1:3686915-3686934 None:intergenic 35.0%
TATGGTTCAGACTAGGAAAT+CGG + Chr1:3685913-3685932 MsG0180000275.01.T01:CDS 35.0%
TCAGTACCATATTTGAAAGG+TGG - Chr1:3687668-3687687 None:intergenic 35.0%
TCTGTAAATTGGGCACAAAA+CGG - Chr1:3686955-3686974 None:intergenic 35.0%
TGAAACTCTACCAGTGAATA+GGG - Chr1:3687236-3687255 None:intergenic 35.0%
TGAAGACGGAAATCAACTTT+CGG + Chr1:3685597-3685616 MsG0180000275.01.T01:CDS 35.0%
TTACATCCGAATCTTATCCA+TGG + Chr1:3688931-3688950 MsG0180000275.01.T01:three_prime_UTR 35.0%
TTTCAGAAAATGTTGACAGC+TGG + Chr1:3687251-3687270 MsG0180000275.01.T01:intron 35.0%
! ATGGACTAATGTCATTACTG+TGG + Chr1:3688216-3688235 MsG0180000275.01.T01:intron 35.0%
! CTAGGTTGAATTGAATAGGA+TGG - Chr1:3687695-3687714 None:intergenic 35.0%
! CTCACAAGGTTATGTCATTT+CGG + Chr1:3688559-3688578 MsG0180000275.01.T01:intron 35.0%
! GATGGGTTTACAAATAGTTC+TGG + Chr1:3686349-3686368 MsG0180000275.01.T01:CDS 35.0%
! TAAACCGACAAGACTAGTTA+TGG + Chr1:3688197-3688216 MsG0180000275.01.T01:intron 35.0%
! TCTCGTCTCTTTCTCTAAAA+TGG + Chr1:3687148-3687167 MsG0180000275.01.T01:intron 35.0%
!! AGTGACATTGATTCTGAAGA+CGG + Chr1:3685583-3685602 MsG0180000275.01.T01:CDS 35.0%
!! GTCTTGTCGGTTTAAGATAA+TGG - Chr1:3688191-3688210 None:intergenic 35.0%
!! TAGTCCATAACTAGTCTTGT+CGG - Chr1:3688204-3688223 None:intergenic 35.0%
AACGAATAATACGCAACACC+AGG - Chr1:3686244-3686263 None:intergenic 40.0%
AATGCAACTGGAATTGGAAC+TGG + Chr1:3685854-3685873 MsG0180000275.01.T01:CDS 40.0%
AGAAAAAGGCTCAGGAAATG+AGG + Chr1:3688494-3688513 MsG0180000275.01.T01:intron 40.0%
AGAGAAAGAGACGAGATACT+CGG - Chr1:3687144-3687163 None:intergenic 40.0%
ATGAACGTGTAACCATGACA+AGG + Chr1:3687192-3687211 MsG0180000275.01.T01:intron 40.0%
ATGGTTCAGACTAGGAAATC+GGG + Chr1:3685914-3685933 MsG0180000275.01.T01:CDS 40.0%
ATTTGTAAACCCATCAGCTG+AGG - Chr1:3686344-3686363 None:intergenic 40.0%
CATAACCTTGTGAGAAGTTC+TGG - Chr1:3688553-3688572 None:intergenic 40.0%
CCGAATTATCGTCATTGTCA+AGG + Chr1:3685983-3686002 MsG0180000275.01.T01:CDS 40.0%
CGCATGGGAAAATTTGCAAA+AGG + Chr1:3687875-3687894 MsG0180000275.01.T01:three_prime_UTR 40.0%
CTGAAACTCTACCAGTGAAT+AGG - Chr1:3687237-3687256 None:intergenic 40.0%
CTGAACAATGCTAATGCAAC+TGG + Chr1:3685842-3685861 MsG0180000275.01.T01:CDS 40.0%
GAAGGGATTCTTAATGCATG+CGG - Chr1:3688345-3688364 None:intergenic 40.0%
GATGATCACTTGAGCTAGTA+GGG - Chr1:3687969-3687988 None:intergenic 40.0%
GCATTAACAGCAGCAGAAAA+AGG - Chr1:3686322-3686341 None:intergenic 40.0%
GGAGAAGTTTGATGCTTTCA+AGG + Chr1:3686975-3686994 MsG0180000275.01.T01:exon 40.0%
GGGGAAACTTCACTTCTTAT+TGG - Chr1:3687461-3687480 None:intergenic 40.0%
GTAAACAAAGACCCACTTGA+AGG + Chr1:3687927-3687946 MsG0180000275.01.T01:intron 40.0%
GTGACCGAAATTGAACTTAG+GGG - Chr1:3688093-3688112 None:intergenic 40.0%
GTGTTGCAATGCAAAAAGGT+TGG + Chr1:3686008-3686027 MsG0180000275.01.T01:CDS 40.0%
GTTTGATGCTTTCAAGGATG+CGG + Chr1:3686981-3687000 MsG0180000275.01.T01:three_prime_UTR 40.0%
TCATAGCTCCAACTAATCGA+GGG - Chr1:3685886-3685905 None:intergenic 40.0%
TCTTTCTCTCTAGCACTCAA+AGG + Chr1:3685640-3685659 MsG0180000275.01.T01:CDS 40.0%
TGGAGCTATGAAGAAGAGTA+TGG + Chr1:3685895-3685914 MsG0180000275.01.T01:CDS 40.0%
TTCATAGCTCCAACTAATCG+AGG - Chr1:3685887-3685906 None:intergenic 40.0%
TTGTTCAGATCTAACGAAGC+AGG - Chr1:3685830-3685849 None:intergenic 40.0%
TTGTTTGTCCCATGGCTAAA+GGG + Chr1:3687834-3687853 MsG0180000275.01.T01:three_prime_UTR 40.0%
TTTGATGCTTTCAAGGATGC+GGG + Chr1:3686982-3687001 MsG0180000275.01.T01:three_prime_UTR 40.0%
TTTGTTTGTCCCATGGCTAA+AGG + Chr1:3687833-3687852 MsG0180000275.01.T01:three_prime_UTR 40.0%
! AAGGAATCTGAAGCAGGAAA+TGG - Chr1:3688908-3688927 None:intergenic 40.0%
! AGAAGAGTATGGTTCAGACT+AGG + Chr1:3685906-3685925 MsG0180000275.01.T01:CDS 40.0%
! AGGAATCTGAAGCAGGAAAT+GGG - Chr1:3688907-3688926 None:intergenic 40.0%
! GTTTTGTGCCCAATTTACAG+AGG + Chr1:3686954-3686973 MsG0180000275.01.T01:intron 40.0%
! TAAGAGAAGGAATCTGAAGC+AGG - Chr1:3688914-3688933 None:intergenic 40.0%
! TGTGATGTGGATTGAACTCT+TGG + Chr1:3686623-3686642 MsG0180000275.01.T01:intron 40.0%
! TTTGCAAATTTTCCCATGCG+CGG - Chr1:3687875-3687894 None:intergenic 40.0%
!! ACAAATAGTTCTGGTGGCAA+TGG + Chr1:3686358-3686377 MsG0180000275.01.T01:CDS 40.0%
!! GGGTTTACAAATAGTTCTGG+TGG + Chr1:3686352-3686371 MsG0180000275.01.T01:CDS 40.0%
!! GTAGAAGCTTAAAAGGCATC+AGG - Chr1:3688625-3688644 None:intergenic 40.0%
!! GTGGATTTTGAGTCCTGTTT+CGG + Chr1:3686141-3686160 MsG0180000275.01.T01:CDS 40.0%
!! TGGATTTTGAGTCCTGTTTC+GGG + Chr1:3686142-3686161 MsG0180000275.01.T01:CDS 40.0%
AAACACAAGGCCCTATTCAC+TGG + Chr1:3687223-3687242 MsG0180000275.01.T01:intron 45.0%
AAAGAAGCGAGCATCTTCCA+TGG + Chr1:3688441-3688460 MsG0180000275.01.T01:intron 45.0%
AACGTGTAACCATGACAAGG+TGG + Chr1:3687195-3687214 MsG0180000275.01.T01:intron 45.0%
AATGGATATCAGGGATGTGC+AGG + Chr1:3687166-3687185 MsG0180000275.01.T01:intron 45.0%
ACAACCCTCAAAGAACCATC+TGG - Chr1:3688593-3688612 None:intergenic 45.0%
AGAAGTCCTCATATTGGGAG+AGG - Chr1:3687079-3687098 None:intergenic 45.0%
AGTTGCCAGAACTTCTCACA+AGG + Chr1:3688545-3688564 MsG0180000275.01.T01:intron 45.0%
ATACTCGGCAAATCTGTGAC+GGG - Chr1:3687129-3687148 None:intergenic 45.0%
ATGTCCCTTCTTGAAACAGC+AGG - Chr1:3687021-3687040 None:intergenic 45.0%
ATTCGCTCAGAAAAAGGCTC+AGG + Chr1:3688486-3688505 MsG0180000275.01.T01:intron 45.0%
CAGCACTCGATCTTCATCTT+GGG + Chr1:3687288-3687307 MsG0180000275.01.T01:intron 45.0%
CATAGCTCCAACTAATCGAG+GGG - Chr1:3685885-3685904 None:intergenic 45.0%
CCATCAAAAAAGTGACCTGC+AGG - Chr1:3686274-3686293 None:intergenic 45.0%
CCTAGCTTCACTTGAACAGA+AGG - Chr1:3688654-3688673 None:intergenic 45.0%
CCTTCTGTTCAAGTGAAGCT+AGG + Chr1:3688651-3688670 MsG0180000275.01.T01:intron 45.0%
CTGTTAATGCCTCAGCTGAT+GGG + Chr1:3686332-3686351 MsG0180000275.01.T01:CDS 45.0%
CTTGAGGCTATCAAAACCCA+TGG - Chr1:3688951-3688970 None:intergenic 45.0%
GAATAATACGCAACACCAGG+TGG - Chr1:3686241-3686260 None:intergenic 45.0%
GAGAACGTTGCCGTCTAAAT+GGG + Chr1:3686105-3686124 MsG0180000275.01.T01:CDS 45.0%
GAGCAGCAATACAGAAACAG+AGG + Chr1:3687905-3687924 MsG0180000275.01.T01:three_prime_UTR 45.0%
GATACTCGGCAAATCTGTGA+CGG - Chr1:3687130-3687149 None:intergenic 45.0%
GGATGATCACTTGAGCTAGT+AGG - Chr1:3687970-3687989 None:intergenic 45.0%
TAATTCGGAGTTCCAGGACT+CGG - Chr1:3685971-3685990 None:intergenic 45.0%
TATTCGTTGTATTCGCCTGC+AGG + Chr1:3686256-3686275 MsG0180000275.01.T01:CDS 45.0%
TCAAGGTAGCTCATGGCATT+TGG - Chr1:3687522-3687541 None:intergenic 45.0%
TCAGACTAGGAAATCGGGAA+CGG + Chr1:3685919-3685938 MsG0180000275.01.T01:CDS 45.0%
TCCGCATCTTCCCATTTAGA+CGG - Chr1:3686118-3686137 None:intergenic 45.0%
TGAAACAGCAGGGGATACAT+TGG - Chr1:3687010-3687029 None:intergenic 45.0%
TGACGATAATTCGGAGTTCC+AGG - Chr1:3685977-3685996 None:intergenic 45.0%
TGTCCCTTCTTGAAACAGCA+GGG - Chr1:3687020-3687039 None:intergenic 45.0%
TTAGCATAACAACCTCGGGA+AGG - Chr1:3686475-3686494 None:intergenic 45.0%
TTCTGAGCGAGTTGTAAGTG+GGG + Chr1:3686033-3686052 MsG0180000275.01.T01:CDS 45.0%
! CACCATTACCAACTTGCTTC+CGG - Chr1:3686060-3686079 None:intergenic 45.0%
! GCTGTTTCAAGAAGGGACAT+GGG + Chr1:3687021-3687040 MsG0180000275.01.T01:three_prime_UTR 45.0%
! GGAATCTGAAGCAGGAAATG+GGG - Chr1:3688906-3688925 None:intergenic 45.0%
! GTTATGTCATTTCGGAGAGC+CGG + Chr1:3688567-3688586 MsG0180000275.01.T01:intron 45.0%
! GTTCTGAGCGAGTTGTAAGT+GGG + Chr1:3686032-3686051 MsG0180000275.01.T01:CDS 45.0%
! TGAATAGGGCCTTGTGTTTC+TGG - Chr1:3687222-3687241 None:intergenic 45.0%
!! AATAGTTCTGGTGGCAATGG+TGG + Chr1:3686361-3686380 MsG0180000275.01.T01:CDS 45.0%
!! AGCTTAAAAGGCATCAGGAC+AGG - Chr1:3688620-3688639 None:intergenic 45.0%
!! AGTTCTGAGCGAGTTGTAAG+TGG + Chr1:3686031-3686050 MsG0180000275.01.T01:CDS 45.0%
!! ATCCCCTGCTGTTTCAAGAA+GGG + Chr1:3687014-3687033 MsG0180000275.01.T01:three_prime_UTR 45.0%
!! ATTTTGAGTCCTGTTTCGGG+GGG + Chr1:3686145-3686164 MsG0180000275.01.T01:CDS 45.0%
!! GATTTTGAGTCCTGTTTCGG+GGG + Chr1:3686144-3686163 MsG0180000275.01.T01:CDS 45.0%
!! GGATTTTGAGTCCTGTTTCG+GGG + Chr1:3686143-3686162 MsG0180000275.01.T01:CDS 45.0%
!! GGTGGTGTTGCAATGCAAAA+AGG + Chr1:3686004-3686023 MsG0180000275.01.T01:CDS 45.0%
!! TATCCCCTGCTGTTTCAAGA+AGG + Chr1:3687013-3687032 MsG0180000275.01.T01:three_prime_UTR 45.0%
!! TGCTGTTTCAAGAAGGGACA+TGG + Chr1:3687020-3687039 MsG0180000275.01.T01:three_prime_UTR 45.0%
!!! CCTGCAGGTCACTTTTTTGA+TGG + Chr1:3686271-3686290 MsG0180000275.01.T01:CDS 45.0%
!!! GCAGGTCACTTTTTTGATGG+AGG + Chr1:3686274-3686293 MsG0180000275.01.T01:CDS 45.0%
AAGCCAAAATCACCGCGCAT+GGG + Chr1:3687860-3687879 MsG0180000275.01.T01:three_prime_UTR 50.0%
ACATGGATGCTCTCAGATGC+AGG + Chr1:3686435-3686454 MsG0180000275.01.T01:CDS 50.0%
ACTGGTACATTTCCGAGTCC+TGG + Chr1:3685956-3685975 MsG0180000275.01.T01:CDS 50.0%
AGGAGACCTAAGTCGAAGAG+TGG + Chr1:3686205-3686224 MsG0180000275.01.T01:CDS 50.0%
ATGCAAGGATCCGTTCGTGT+GGG - Chr1:3686397-3686416 None:intergenic 50.0%
CAAGGTGGTCCAGAAACACA+AGG + Chr1:3687210-3687229 MsG0180000275.01.T01:intron 50.0%
CAGACTAGGAAATCGGGAAC+GGG + Chr1:3685920-3685939 MsG0180000275.01.T01:CDS 50.0%
CATGCTCCTCTCCCAATATG+AGG + Chr1:3687070-3687089 MsG0180000275.01.T01:three_prime_UTR 50.0%
CATGGATGCTCTCAGATGCA+GGG + Chr1:3686436-3686455 MsG0180000275.01.T01:CDS 50.0%
CCAAGATGAAGATCGAGTGC+TGG - Chr1:3687290-3687309 None:intergenic 50.0%
CCAGCACTCGATCTTCATCT+TGG + Chr1:3687287-3687306 MsG0180000275.01.T01:intron 50.0%
CTAAATGGGAAGATGCGGAG+AGG + Chr1:3686119-3686138 MsG0180000275.01.T01:CDS 50.0%
GCCGTCTAAATGGGAAGATG+CGG + Chr1:3686114-3686133 MsG0180000275.01.T01:CDS 50.0%
GCTCGCTCAGTTAGTGTACA+TGG + Chr1:3686418-3686437 MsG0180000275.01.T01:CDS 50.0%
GCTGTTAATGCCTCAGCTGA+TGG + Chr1:3686331-3686350 MsG0180000275.01.T01:CDS 50.0%
GGAGAACGTTGCCGTCTAAA+TGG + Chr1:3686104-3686123 MsG0180000275.01.T01:CDS 50.0%
GGTTAAGAGCAGAGCGAGAA+GGG - Chr1:3687501-3687520 None:intergenic 50.0%
GGTTCTTCCCCTCGATTAGT+TGG + Chr1:3685875-3685894 MsG0180000275.01.T01:CDS 50.0%
GTCCCTTCTTGAAACAGCAG+GGG - Chr1:3687019-3687038 None:intergenic 50.0%
GTTAAGAGCAGAGCGAGAAG+GGG - Chr1:3687500-3687519 None:intergenic 50.0%
TCTGAGCGAGTTGTAAGTGG+GGG + Chr1:3686034-3686053 MsG0180000275.01.T01:CDS 50.0%
TGGTTAAGAGCAGAGCGAGA+AGG - Chr1:3687502-3687521 None:intergenic 50.0%
TTAAGAGCAGAGCGAGAAGG+GGG - Chr1:3687499-3687518 None:intergenic 50.0%
TTCGACTTAGGTCTCCTCAG+TGG - Chr1:3686202-3686221 None:intergenic 50.0%
TTCTGGCAACTTGATGAGCC+TGG - Chr1:3688536-3688555 None:intergenic 50.0%
TTTCAGTTCCACAGCCACTG+AGG + Chr1:3686185-3686204 MsG0180000275.01.T01:CDS 50.0%
TTTGTCCCATGGCTAAAGGG+AGG + Chr1:3687837-3687856 MsG0180000275.01.T01:three_prime_UTR 50.0%
! AAGGGGGGAGTTGACTTCAA+CGG - Chr1:3687483-3687502 None:intergenic 50.0%
! GTTTCTGGACCACCTTGTCA+TGG - Chr1:3687207-3687226 None:intergenic 50.0%
! TTTCCCATGCGCGGTGATTT+TGG - Chr1:3687866-3687885 None:intergenic 50.0%
AAGTCGAAGAGTGGTCCGCT+TGG + Chr1:3686214-3686233 MsG0180000275.01.T01:CDS 55.0%
AATGGGAAGATGCGGAGAGG+TGG + Chr1:3686122-3686141 MsG0180000275.01.T01:CDS 55.0%
AGCGGACCACTCTTCGACTT+AGG - Chr1:3686214-3686233 None:intergenic 55.0%
ATCGGGAACGGGTACAGTGA+CGG + Chr1:3685931-3685950 MsG0180000275.01.T01:CDS 55.0%
CACACGAACGGATCCTTGCA+TGG + Chr1:3686396-3686415 MsG0180000275.01.T01:CDS 55.0%
CATGCAAGGATCCGTTCGTG+TGG - Chr1:3686398-3686417 None:intergenic 55.0%
CCCTCAAAGAACCATCTGGC+CGG - Chr1:3688589-3688608 None:intergenic 55.0%
CCGGCCAGATGGTTCTTTGA+GGG + Chr1:3688586-3688605 MsG0180000275.01.T01:intron 55.0%
CTAACTGAGCGAGCCATGCA+AGG - Chr1:3686412-3686431 None:intergenic 55.0%
GAAGCCAAAATCACCGCGCA+TGG + Chr1:3687859-3687878 MsG0180000275.01.T01:three_prime_UTR 55.0%
GGAGTTCAGTTCAGTCGACC+AGG + Chr1:3688515-3688534 MsG0180000275.01.T01:intron 55.0%
GGATATCAGGGATGTGCAGG+TGG + Chr1:3687169-3687188 MsG0180000275.01.T01:intron 55.0%
GGCTTCCTCCCTTTAGCCAT+GGG - Chr1:3687845-3687864 None:intergenic 55.0%
TAAGAGCAGAGCGAGAAGGG+GGG - Chr1:3687498-3687517 None:intergenic 55.0%
TGGCTTCCTCCCTTTAGCCA+TGG - Chr1:3687846-3687865 None:intergenic 55.0%
TTAGGTCTCCTCAGTGGCTG+TGG - Chr1:3686196-3686215 None:intergenic 55.0%
! AGGAGCATGAGCTACCCTCT+GGG - Chr1:3687059-3687078 None:intergenic 55.0%
! AGGGGGGAGTTGACTTCAAC+GGG - Chr1:3687482-3687501 None:intergenic 55.0%
! AGTTCTGGTGGCAATGGTGG+TGG + Chr1:3686364-3686383 MsG0180000275.01.T01:CDS 55.0%
!! AAATCTGTGACGGGCAGGGA+AGG - Chr1:3687120-3687139 None:intergenic 55.0%
!! CAATCGTCGATTCCTTCCCG+AGG + Chr1:3686460-3686479 MsG0180000275.01.T01:CDS 55.0%
!! GGCCGGAAGCAAGTTGGTAA+TGG + Chr1:3686055-3686074 MsG0180000275.01.T01:CDS 55.0%
AGCGAGTTGTAAGTGGGGGC+CGG + Chr1:3686038-3686057 MsG0180000275.01.T01:CDS 60.0%
AGCTACCCTCTGGGCTCATC+TGG - Chr1:3687050-3687069 None:intergenic 60.0%
AGTCCTGTTTCGGGGGGTGA+TGG + Chr1:3686151-3686170 MsG0180000275.01.T01:CDS 60.0%
ATTTCGGAGAGCCGGCCAGA+TGG + Chr1:3688575-3688594 MsG0180000275.01.T01:intron 60.0%
GCAACACCAGGTGGACCAAG+CGG - Chr1:3686232-3686251 None:intergenic 60.0%
GCCGGCCAGATGGTTCTTTG+AGG + Chr1:3688585-3688604 MsG0180000275.01.T01:intron 60.0%
GCTACCCTCTGGGCTCATCT+GGG - Chr1:3687049-3687068 None:intergenic 60.0%
GTTCCATCACCCCCCGAAAC+AGG - Chr1:3686157-3686176 None:intergenic 60.0%
TCGGGAACGGGTACAGTGAC+GGG + Chr1:3685932-3685951 MsG0180000275.01.T01:CDS 60.0%
TGGAGGGCTTCCCACACGAA+CGG + Chr1:3686384-3686403 MsG0180000275.01.T01:CDS 60.0%
! GAGGAGCATGAGCTACCCTC+TGG - Chr1:3687060-3687079 None:intergenic 60.0%
! GGGGGAGTTGACTTCAACGG+GGG - Chr1:3687480-3687499 None:intergenic 60.0%
! GGGGGGAGTTGACTTCAACG+GGG - Chr1:3687481-3687500 None:intergenic 60.0%
!! CGGCAAATCTGTGACGGGCA+GGG - Chr1:3687124-3687143 None:intergenic 60.0%
!! CTGGTGGCAATGGTGGTGGA+GGG + Chr1:3686368-3686387 MsG0180000275.01.T01:CDS 60.0%
!! GGGGGGTGATGGAACTGGAA+GGG + Chr1:3686162-3686181 MsG0180000275.01.T01:CDS 60.0%
!! GTTTCGGGGGGTGATGGAAC+TGG + Chr1:3686157-3686176 MsG0180000275.01.T01:CDS 60.0%
!! TCGGCAAATCTGTGACGGGC+AGG - Chr1:3687125-3687144 None:intergenic 60.0%
!! TCTGGTGGCAATGGTGGTGG+AGG + Chr1:3686367-3686386 MsG0180000275.01.T01:CDS 60.0%
AGTGGGGGCCGGAAGCAAGT+TGG + Chr1:3686049-3686068 MsG0180000275.01.T01:CDS 65.0%
AGTGGTCCGCTTGGTCCACC+TGG + Chr1:3686223-3686242 MsG0180000275.01.T01:CDS 65.0%
CGGGAACGGGTACAGTGACG+GGG + Chr1:3685933-3685952 MsG0180000275.01.T01:CDS 65.0%
GGCACCCAGATGAGCCCAGA+GGG + Chr1:3687042-3687061 MsG0180000275.01.T01:three_prime_UTR 65.0%
! ACGGGTACAGTGACGGGGAC+TGG + Chr1:3685938-3685957 MsG0180000275.01.T01:CDS 65.0%
!! CGGGGGGTGATGGAACTGGA+AGG + Chr1:3686161-3686180 MsG0180000275.01.T01:CDS 65.0%
!! TCTGTGACGGGCAGGGAAGG+TGG - Chr1:3687117-3687136 None:intergenic 65.0%
GACGGGCAGGGAAGGTGGAG+TGG - Chr1:3687112-3687131 None:intergenic 70.0%
GGGCACCCAGATGAGCCCAG+AGG + Chr1:3687041-3687060 MsG0180000275.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 3685544 3689018 3685544 ID=MsG0180000275.01;Name=MsG0180000275.01
Chr1 mRNA 3685544 3689018 3685544 ID=MsG0180000275.01.T01;Parent=MsG0180000275.01;Name=MsG0180000275.01.T01;_AED=0.49;_eAED=0.59;_QI=0|0|0|1|0.75|0.6|5|402|280
Chr1 exon 3685544 3685661 3685544 ID=MsG0180000275.01.T01:exon:5922;Parent=MsG0180000275.01.T01
Chr1 exon 3685840 3686562 3685840 ID=MsG0180000275.01.T01:exon:5921;Parent=MsG0180000275.01.T01
Chr1 exon 3686974 3687144 3686974 ID=MsG0180000275.01.T01:exon:5920;Parent=MsG0180000275.01.T01
Chr1 exon 3687792 3687926 3687792 ID=MsG0180000275.01.T01:exon:5919;Parent=MsG0180000275.01.T01
Chr1 exon 3688921 3689018 3688921 ID=MsG0180000275.01.T01:exon:5918;Parent=MsG0180000275.01.T01
Chr1 CDS 3685544 3685661 3685544 ID=MsG0180000275.01.T01:cds;Parent=MsG0180000275.01.T01
Chr1 CDS 3685840 3686562 3685840 ID=MsG0180000275.01.T01:cds;Parent=MsG0180000275.01.T01
Chr1 CDS 3686974 3686975 3686974 ID=MsG0180000275.01.T01:cds;Parent=MsG0180000275.01.T01
Chr1 three_prime_UTR 3686976 3687144 3686976 ID=MsG0180000275.01.T01:three_prime_utr;Parent=MsG0180000275.01.T01
Chr1 three_prime_UTR 3687792 3687926 3687792 ID=MsG0180000275.01.T01:three_prime_utr;Parent=MsG0180000275.01.T01
Chr1 three_prime_UTR 3688921 3689018 3688921 ID=MsG0180000275.01.T01:three_prime_utr;Parent=MsG0180000275.01.T01
Gene Sequence

>MsG0180000275.01.T01

TTGCATCGCACTATCAACATCACAGTTCAAAAGGAAGATAGTGACATTGATTCTGAAGACGGAAATCAACTTTCGGAGTTTGATTCTGCAAGAAACTCTTTCTCTCTAGCACTCAAAGATCTGAACAATGCTAATGCAACTGGAATTGGAACTGGTTCTTCCCCTCGATTAGTTGGAGCTATGAAGAAGAGTATGGTTCAGACTAGGAAATCGGGAACGGGTACAGTGACGGGGACTGGTACATTTCCGAGTCCTGGAACTCCGAATTATCGTCATTGTCAAGGTGGTGTTGCAATGCAAAAAGGTTGGAGTTCTGAGCGAGTTGTAAGTGGGGGCCGGAAGCAAGTTGGTAATGGTGTGACTGCGTTGTGTTTAAGTAATGGGAGAACGTTGCCGTCTAAATGGGAAGATGCGGAGAGGTGGATTTTGAGTCCTGTTTCGGGGGGTGATGGAACTGGAAGGGTTTCAGTTCCACAGCCACTGAGGAGACCTAAGTCGAAGAGTGGTCCGCTTGGTCCACCTGGTGTTGCGTATTATTCGTTGTATTCGCCTGCAGGTCACTTTTTTGATGGAGGAAATTTTATGACAGCTGCTTCACCTTTTTCTGCTGCTGTTAATGCCTCAGCTGATGGGTTTACAAATAGTTCTGGTGGCAATGGTGGTGGAGGGCTTCCCACACGAACGGATCCTTGCATGGCTCGCTCAGTTAGTGTACATGGATGCTCTCAGATGCAGGGTCAATCGTCGATTCCTTCCCGAGGTTGTTATGCTAATCTTAATATAATATTCATTGATGAAATTTTACCTTATCTAGTTTTGAGTTGTGATTTTGATGTAATTTAG
Protein sequence

>MsG0180000275.01.T01

LHRTINITVQKEDSDIDSEDGNQLSEFDSARNSFSLALKDLNNANATGIGTGSSPRLVGAMKKSMVQTRKSGTGTVTGTGTFPSPGTPNYRHCQGGVAMQKGWSSERVVSGGRKQVGNGVTALCLSNGRTLPSKWEDAERWILSPVSGGDGTGRVSVPQPLRRPKSKSGPLGPPGVAYYSLYSPAGHFFDGGNFMTAASPFSAAVNASADGFTNSSGGNGGGGLPTRTDPCMARSVSVHGCSQMQGQSSIPSRGCYANLNIIFIDEILPYLVLSCDFDVI*