AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004988.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004988.01.T01 MTR_1g090737 58.416 202 57 5 151 325 20 221 8.46e-59 202
MsG0180004988.01.T01 MTR_1g090737 96.610 59 2 0 328 386 439 497 1.77e-29 121
MsG0180004988.01.T01 MTR_1g090733 100.000 49 0 0 86 134 280 328 2.87e-26 112
MsG0180004988.01.T01 MTR_1g090733 87.179 39 5 0 49 87 180 218 1.69e-12 69.7
MsG0180004988.01.T01 MTR_8g039720 72.414 58 16 0 328 385 436 493 5.84e-22 99.0
MsG0180004988.01.T01 MTR_1g026310 68.966 58 18 0 328 385 433 490 3.46e-21 96.7
MsG0180004988.01.T01 MTR_1g073180 66.667 66 22 0 320 385 399 464 4.00e-21 96.3
MsG0180004988.01.T01 MTR_1g073180 66.667 66 22 0 320 385 421 486 4.04e-21 96.3
MsG0180004988.01.T01 MTR_2g095510 41.818 110 51 1 276 385 373 469 1.04e-20 95.1
MsG0180004988.01.T01 MTR_4g057730 70.690 58 17 0 328 385 415 472 4.25e-20 93.2
MsG0180004988.01.T01 MTR_2g105570 71.930 57 16 0 328 384 421 477 6.74e-20 92.8
MsG0180004988.01.T01 MTR_4g057730 71.930 57 16 0 328 384 415 471 9.05e-20 92.0
MsG0180004988.01.T01 MTR_5g007640 68.421 57 18 0 328 384 460 516 1.81e-19 91.7
MsG0180004988.01.T01 MTR_1g063110 68.421 57 18 0 328 384 421 477 2.85e-18 87.8
MsG0180004988.01.T01 MTR_1g063120 68.421 57 18 0 328 384 425 481 3.81e-18 87.4
MsG0180004988.01.T01 MTR_3g460770 67.857 56 18 0 329 384 415 470 8.66e-18 86.3
MsG0180004988.01.T01 MTR_3g088880 63.793 58 21 0 328 385 429 486 1.40e-17 85.5
MsG0180004988.01.T01 MTR_3g088870 63.793 58 21 0 328 385 431 488 1.50e-17 85.5
MsG0180004988.01.T01 MTR_4g057755 64.286 56 20 0 328 383 63 118 1.69e-17 79.0
MsG0180004988.01.T01 MTR_3g110198 32.934 167 44 3 39 137 212 378 3.46e-15 78.2
MsG0180004988.01.T01 MTR_5g027500 56.364 55 24 0 328 382 441 495 4.81e-15 77.8
MsG0180004988.01.T01 MTR_4g077900 54.545 55 25 0 328 382 351 405 9.41e-15 76.6
MsG0180004988.01.T01 MTR_5g027480 54.545 55 25 0 328 382 428 482 5.81e-14 74.3
MsG0180004988.01.T01 MTR_4g128337 66.667 57 19 0 328 384 421 477 5.44e-13 71.2
MsG0180004988.01.T01 MTR_7g103150 57.895 57 19 1 86 137 213 269 1.41e-12 69.7
MsG0180004988.01.T01 MTR_4g005750 64.912 57 20 0 328 384 414 470 1.95e-12 69.7
MsG0180004988.01.T01 MTR_1g006600 54.386 57 21 1 86 137 315 371 7.87e-12 67.8
MsG0180004988.01.T01 MTR_4g100730 59.184 49 19 1 96 144 273 320 4.11e-11 65.5
MsG0180004988.01.T01 MTR_8g102840 53.704 54 20 1 86 134 337 390 5.95e-11 64.7
MsG0180004988.01.T01 MTR_1569s0010 44.262 61 34 0 323 383 403 463 8.16e-11 64.3
MsG0180004988.01.T01 MTR_8g102840 53.704 54 20 1 86 134 337 390 8.39e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004988.01.T01 AT1G20510 74.138 58 15 0 328 385 417 474 8.97e-23 101
MsG0180004988.01.T01 AT1G20510 75.439 57 14 0 328 384 417 473 1.83e-22 100
MsG0180004988.01.T01 AT1G20500 69.492 59 18 0 327 385 422 480 1.48e-21 97.8
MsG0180004988.01.T01 AT5G38120 70.690 58 17 0 328 385 423 480 1.09e-20 95.1
MsG0180004988.01.T01 AT5G38120 70.690 58 17 0 328 385 423 480 1.17e-20 95.1
MsG0180004988.01.T01 AT5G38120 71.930 57 16 0 328 384 423 479 2.64e-20 93.6
MsG0180004988.01.T01 AT5G38120 71.930 57 16 0 328 384 423 479 2.64e-20 93.6
MsG0180004988.01.T01 AT1G20480 66.129 62 21 0 328 389 438 499 6.87e-20 92.8
MsG0180004988.01.T01 AT4G19010 67.273 55 18 0 328 382 435 489 2.67e-19 90.9
MsG0180004988.01.T01 AT4G05160 65.517 58 20 0 328 385 417 474 9.61e-19 89.4
MsG0180004988.01.T01 AT3G21230 64.286 56 20 0 328 383 441 496 7.49e-18 86.7
MsG0180004988.01.T01 AT3G21230 64.286 56 20 0 328 383 441 496 7.77e-18 86.3
MsG0180004988.01.T01 AT3G21230 64.286 56 20 0 328 383 441 496 9.24e-18 86.3
MsG0180004988.01.T01 AT3G21240 62.069 58 22 0 328 385 427 484 3.04e-17 84.3
MsG0180004988.01.T01 AT3G21240 62.069 58 22 0 328 385 427 484 3.04e-17 84.3
MsG0180004988.01.T01 AT1G65060 63.158 57 21 0 328 384 437 493 3.33e-17 84.3
MsG0180004988.01.T01 AT3G21240 62.500 56 21 0 328 383 427 482 1.37e-16 82.8
MsG0180004988.01.T01 AT5G63380 60.345 58 23 0 328 385 431 488 1.96e-16 82.0
MsG0180004988.01.T01 AT5G37000 72.973 37 10 0 98 134 296 332 5.32e-13 71.2
MsG0180004988.01.T01 AT1G62940 66.667 57 19 0 328 384 413 469 5.48e-12 68.2
MsG0180004988.01.T01 AT4G32790 50.877 57 23 1 86 137 321 377 2.34e-11 66.2
MsG0180004988.01.T01 AT4G32790 50.877 57 23 1 86 137 321 377 2.34e-11 66.2
MsG0180004988.01.T01 AT4G32790 50.877 57 23 1 86 137 321 377 2.34e-11 66.2
MsG0180004988.01.T01 AT1G20510 74.286 35 9 0 328 362 417 451 4.04e-11 65.5

Find 97 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAGTATACCTTGAAAATT+TGG 0.156755 1:-85275126 None:intergenic
TTGCTGGAAAATATCGTTTC+TGG 0.161910 1:+85275903 MsG0180004988.01.T01:CDS
AATGGTAAATTCCTGTTTCT+TGG 0.228533 1:-85281073 None:intergenic
TAACTGCTGCATCAACAATA+AGG 0.276654 1:-85282605 None:intergenic
CCTTGCAACAGCTTTGTTCC+AGG 0.293939 1:+85281271 MsG0180004988.01.T01:CDS
GACCATTTGTGTAACTCTTC+TGG 0.303191 1:-85281482 None:intergenic
CTTCTTATTGTCAGAAAGAT+TGG 0.307116 1:-85275846 None:intergenic
CTTTGGTGGGATTTCATGTT+TGG 0.312930 1:-85281114 None:intergenic
AATCAAGCACAAAGGGTATC+AGG 0.343261 1:+85282387 MsG0180004988.01.T01:CDS
GCCGCTATACTTTACTCTTC+AGG 0.344264 1:+85281636 MsG0180004988.01.T01:CDS
CAAGATTCACAAGATGAGTT+TGG 0.348457 1:-85281334 None:intergenic
TTGAAAATTTGGAAACTTCT+CGG 0.359734 1:-85275115 None:intergenic
CATGACAGGCAACGAGAAAA+TGG 0.365148 1:-85275946 None:intergenic
CTACATAGTTGAACGAATAA+AGG 0.367598 1:+85282360 MsG0180004988.01.T01:CDS
AACTGCTGCATCAACAATAA+GGG 0.374049 1:-85282604 None:intergenic
CAGTTTGAAGAGTTAATAGA+AGG 0.375247 1:+85281561 MsG0180004988.01.T01:CDS
TTCTCGTTGCCTGTCATGAT+TGG 0.379877 1:+85275951 MsG0180004988.01.T01:CDS
CAGGCCAGGTAGGCCACTCT+TGG 0.381120 1:+85282800 MsG0180004988.01.T01:CDS
TCAGGTAGCTCCTGCAGAAC+TGG 0.384556 1:+85282560 MsG0180004988.01.T01:intron
TTGGAAACTTCTCGGTAAAC+AGG 0.388967 1:-85275107 None:intergenic
CACGTTGCGAAGACCACTTT+CGG 0.392043 1:-85275010 None:intergenic
AATGTCTTATCGAACTCTTC+AGG 0.393271 1:+85275074 MsG0180004988.01.T01:CDS
TTTCAATCAATTCAAGAGAA+AGG 0.401244 1:+85274527 MsG0180004988.01.T01:CDS
GAATTGTAGGAACTCCAGTT+TGG 0.401561 1:-85281505 None:intergenic
TATCGTTTCTGGAACAGAAC+TGG 0.425913 1:+85275914 MsG0180004988.01.T01:CDS
ACTTTACTCTTCAGGACTAC+TGG 0.431344 1:+85281644 MsG0180004988.01.T01:CDS
GTTCCTACAATTCTCACCTC+TGG 0.439013 1:+85281515 MsG0180004988.01.T01:CDS
CGTTCAGTTCGCAAATGCTA+AGG 0.440479 1:+85275822 MsG0180004988.01.T01:intron
GCATATGTGGTGAGGGCAGC+TGG 0.443236 1:+85282742 MsG0180004988.01.T01:CDS
TTTCAAGCTTAACAAGAGAA+TGG 0.452313 1:-85281091 None:intergenic
GTGGCTACAATCCAAGAAAC+AGG 0.453251 1:+85281062 MsG0180004988.01.T01:CDS
AATTGTAGGAACTCCAGTTT+GGG 0.455522 1:-85281504 None:intergenic
AAATATGTGAATATAATTGC+TGG 0.457652 1:+85275887 MsG0180004988.01.T01:CDS
TCATTCAATTTGTGCAGGCC+AGG 0.459667 1:+85282786 MsG0180004988.01.T01:CDS
AGCACAGATTCCAGTTCTGC+AGG 0.460066 1:-85282570 None:intergenic
AGAGTTGCAGTGTTGAGATC+TGG 0.462977 1:-85281137 None:intergenic
CTCACCTCTGGGACATCTGA+TGG 0.463000 1:+85281527 MsG0180004988.01.T01:CDS
TTACACAAATGGTCCCAAAC+TGG 0.464046 1:+85281491 MsG0180004988.01.T01:CDS
GTCCCAGAGGTGAGAATTGT+AGG 0.467301 1:-85281518 None:intergenic
CTCTCTGTGACTTTCTTATG+TGG 0.468204 1:+85282670 MsG0180004988.01.T01:CDS
TGGTTGAGGACAGGTGATCT+TGG 0.485306 1:+85282313 MsG0180004988.01.T01:CDS
GCAGTGTCTGATTGCTCCAC+AGG 0.486700 1:-85281615 None:intergenic
AGGGTTGAAGATGAAGAAAC+TGG 0.492244 1:+85282707 MsG0180004988.01.T01:CDS
CTTGGTTATATCGATGAGAA+TGG 0.496399 1:+85282331 MsG0180004988.01.T01:CDS
TTCAGAGGTTGGTTGAGGAC+AGG 0.498073 1:+85282304 MsG0180004988.01.T01:intron
GCAGTGTTGAGATCTGGCTT+TGG 0.499142 1:-85281131 None:intergenic
GGAGCCAAGAGTGGCCTACC+TGG 0.499630 1:-85282804 None:intergenic
ATTGATTCAGAGGTTGGTTG+AGG 0.500452 1:+85282299 MsG0180004988.01.T01:intron
GTAGCCACTCTGTTATCAAA+TGG 0.502853 1:-85281047 None:intergenic
GTGTTGAGATCTGGCTTTGG+TGG 0.505365 1:-85281128 None:intergenic
TCATCCGTTGAAGAAGAATC+TGG 0.507710 1:+85281011 MsG0180004988.01.T01:CDS
AGGAGCTAATCAAGCACAAA+GGG 0.511589 1:+85282380 MsG0180004988.01.T01:CDS
CATCAGCAAGATCTCCTTGT+GGG 0.511833 1:-85281175 None:intergenic
TTTGAAAGTAGAGTTTGAAG+TGG 0.517926 1:+85274557 MsG0180004988.01.T01:CDS
TCCAGGACTTGAGATTGAAA+AGG 0.518242 1:+85281288 MsG0180004988.01.T01:CDS
GAGTAACACAGCTAAGCATA+TGG 0.518626 1:-85281364 None:intergenic
TCAAGTCATTCAATTTGTGC+AGG 0.518704 1:+85282781 MsG0180004988.01.T01:CDS
TTCGCCAGATTCTTCTTCAA+CGG 0.524267 1:-85281015 None:intergenic
GCTTAGCTGTGTTACTCAGT+TGG 0.530431 1:+85281370 MsG0180004988.01.T01:CDS
TGTTGAGATCTGGCTTTGGT+GGG 0.536183 1:-85281127 None:intergenic
TTCCTACAATTCTCACCTCT+GGG 0.539856 1:+85281516 MsG0180004988.01.T01:CDS
TCTTTCTGACAATAAGAAGA+TGG 0.558474 1:+85275850 MsG0180004988.01.T01:CDS
GTTCAGTTCGCAAATGCTAA+GGG 0.564890 1:+85275823 MsG0180004988.01.T01:intron
GATTCACAAGATGAGTTTGG+AGG 0.566779 1:-85281331 None:intergenic
CCTGGAACAAAGCTGTTGCA+AGG 0.566869 1:-85281271 None:intergenic
CACCAGAAGAGTTACACAAA+TGG 0.567320 1:+85281480 MsG0180004988.01.T01:CDS
ACCGATGGCATATGTGGTGA+GGG 0.568033 1:+85282735 MsG0180004988.01.T01:CDS
TTATATTCACATATTTGTCA+AGG 0.569332 1:-85275880 None:intergenic
TCAATTTGTGCAGGCCAGGT+AGG 0.576920 1:+85282790 MsG0180004988.01.T01:CDS
AATAGGCGGAGGGGATCGTA+CGG 0.585896 1:-85282630 None:intergenic
AAAGAGTGAAAATAGGCGGA+GGG 0.588432 1:-85282640 None:intergenic
AGAAGCGCACCAATCATGAC+AGG 0.594396 1:-85275960 None:intergenic
TACCGATGGCATATGTGGTG+AGG 0.595660 1:+85282734 MsG0180004988.01.T01:CDS
AAAAGAGTGAAAATAGGCGG+AGG 0.598562 1:-85282641 None:intergenic
ACTGCTGCATCAACAATAAG+GGG 0.600356 1:-85282603 None:intergenic
CTGGAACAAAGCTGTTGCAA+GGG 0.603791 1:-85281270 None:intergenic
TTGATGATAGAAGCCGAAAG+TGG 0.610490 1:+85274997 MsG0180004988.01.T01:intron
GCCCTCACCACATATGCCAT+CGG 0.612252 1:-85282736 None:intergenic
GCAGATACCGATGGCATATG+TGG 0.614552 1:+85282729 MsG0180004988.01.T01:CDS
AAGGAGCTAATCAAGCACAA+AGG 0.617428 1:+85282379 MsG0180004988.01.T01:CDS
CTTCTCGGTAAACAGGTGCA+TGG 0.619780 1:-85275100 None:intergenic
GATTGCTCCACAGGAACATG+TGG 0.623243 1:-85281606 None:intergenic
GCCACTCTGTTATCAAATGG+AGG 0.631334 1:-85281044 None:intergenic
TCTTGATGATCTACACACAA+AGG 0.645322 1:+85274622 MsG0180004988.01.T01:CDS
ACTAATCATAGTGTAACCTA+CGG 0.646523 1:+85281224 MsG0180004988.01.T01:CDS
GTGCTATCACAGTTCCCACA+AGG 0.647014 1:+85281161 MsG0180004988.01.T01:CDS
TCCTGAAGAGTAAAGTATAG+CGG 0.647633 1:-85281637 None:intergenic
AGAGTTGCCACATGTTCCTG+TGG 0.652045 1:+85281599 MsG0180004988.01.T01:CDS
CGTTTCTGGAACAGAACTGG+AGG 0.657497 1:+85275917 MsG0180004988.01.T01:CDS
ATGAAATCAGGAGCCAAGAG+TGG 0.658248 1:-85282813 None:intergenic
AAGAAACTGGCAGATACCGA+TGG 0.659816 1:+85282720 MsG0180004988.01.T01:CDS
AAAATGTCAGGAGAGGGAGT+TGG 0.660081 1:+85280988 MsG0180004988.01.T01:intron
GCATCAGCAAGATCTCCTTG+TGG 0.671856 1:-85281176 None:intergenic
TGATCGACGAATCTCACCGT+AGG 0.690024 1:-85281240 None:intergenic
GCCTCCATTTGATAACAGAG+TGG 0.704841 1:+85281043 MsG0180004988.01.T01:CDS
AAGAGTGAAAATAGGCGGAG+GGG 0.714480 1:-85282639 None:intergenic
CTTTCCATCAGATGTCCCAG+AGG 0.738092 1:-85281531 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTAACTTTC+GGG - Chr1:85277798-85277817 None:intergenic 10.0%
!! AATGTAAAAAAATCTTCAAA+TGG + Chr1:85274732-85274751 MsG0180004988.01.T01:intron 15.0%
!! AATTTCGAAATGATTAATTA+TGG - Chr1:85280353-85280372 None:intergenic 15.0%
!! AGTAAATTACTTTAATTCTA+AGG + Chr1:85282480-85282499 MsG0180004988.01.T01:intron 15.0%
!! ATTATTACATTATGATGATA+TGG - Chr1:85276418-85276437 None:intergenic 15.0%
!! CGCAATATAATAAAAATATA+AGG - Chr1:85279013-85279032 None:intergenic 15.0%
!! TGTTATAAAACGAAAAAAAT+GGG + Chr1:85279981-85280000 MsG0180004988.01.T01:intron 15.0%
!! TTATTACATTATGATGATAT+GGG - Chr1:85276417-85276436 None:intergenic 15.0%
!! TTGTTATAAAACGAAAAAAA+TGG + Chr1:85279980-85279999 MsG0180004988.01.T01:intron 15.0%
!!! AAAAAACAAAAGTTTTCATT+CGG + Chr1:85277464-85277483 MsG0180004988.01.T01:intron 15.0%
!!! ACTTTTTAATTTTCGAAATT+GGG - Chr1:85278807-85278826 None:intergenic 15.0%
!!! ATAGATCTTCATATATTTTA+GGG - Chr1:85278122-85278141 None:intergenic 15.0%
!!! ATGAAAAAGATTTTTATCAA+TGG + Chr1:85279718-85279737 MsG0180004988.01.T01:intron 15.0%
!!! CTAAAATGTAATATTTTGAA+TGG + Chr1:85279172-85279191 MsG0180004988.01.T01:intron 15.0%
!!! TACTTTTTAATTTTCGAAAT+TGG - Chr1:85278808-85278827 None:intergenic 15.0%
!!! TAGTTTTCATTAATACATAT+GGG + Chr1:85282527-85282546 MsG0180004988.01.T01:intron 15.0%
!!! TTAGTTTTCATTAATACATA+TGG + Chr1:85282526-85282545 MsG0180004988.01.T01:intron 15.0%
!!! TTTCTTTTTTATATTTTCCT+CGG - Chr1:85278736-85278755 None:intergenic 15.0%
!!! TTTTTTTTTTTTAACTTTCG+GGG - Chr1:85277797-85277816 None:intergenic 15.0%
!! AAAGTTTATATCTATAGAGA+AGG + Chr1:85275669-85275688 MsG0180004988.01.T01:intron 20.0%
!! AAATAAAAGATTCATTGTGA+AGG + Chr1:85275769-85275788 MsG0180004988.01.T01:intron 20.0%
!! AAATACATAATTTACCAAGT+CGG + Chr1:85276369-85276388 MsG0180004988.01.T01:intron 20.0%
!! AAATATGTGAATATAATTGC+TGG + Chr1:85275887-85275906 MsG0180004988.01.T01:CDS 20.0%
!! AAATTGTGAATAGAATAAGA+GGG + Chr1:85280374-85280393 MsG0180004988.01.T01:intron 20.0%
!! AACCAATGAAAAATTGTATT+AGG + Chr1:85276655-85276674 MsG0180004988.01.T01:intron 20.0%
!! AATAAAATCCAGAAATGAAT+TGG - Chr1:85279697-85279716 None:intergenic 20.0%
!! AATGAAAAAAGAGTGAAAAT+AGG - Chr1:85282650-85282669 None:intergenic 20.0%
!! AGAATATATAGGAAATATTG+AGG + Chr1:85282262-85282281 MsG0180004988.01.T01:intron 20.0%
!! ATAAATAGTTTCAGTTTCAA+TGG + Chr1:85282421-85282440 MsG0180004988.01.T01:intron 20.0%
!! ATCACAATAATTCTAATGTA+CGG - Chr1:85280655-85280674 None:intergenic 20.0%
!! ATTGAAACTGAAACTATTTA+TGG - Chr1:85282422-85282441 None:intergenic 20.0%
!! CATTCATTAAATGATGTATT+TGG + Chr1:85278533-85278552 MsG0180004988.01.T01:intron 20.0%
!! CATTCATTAAATGATGTATT+TGG - Chr1:85278552-85278533 None:intergenic 20.0%
!! CATTTAATTGAGTAAAAGAA+AGG + Chr1:85278308-85278327 MsG0180004988.01.T01:intron 20.0%
!! CTAACACAAAAAAAAAAAAC+AGG - Chr1:85275244-85275263 None:intergenic 20.0%
!! CTTACTATTTATACAACATA+AGG + Chr1:85275997-85276016 MsG0180004988.01.T01:intron 20.0%
!! GCTATTATGAAAGAATATAT+AGG + Chr1:85282251-85282270 MsG0180004988.01.T01:intron 20.0%
!! GTTACAACAAAATACATAAT+AGG + Chr1:85279279-85279298 MsG0180004988.01.T01:intron 20.0%
!! TAAAATAAATGAGCTTTCTT+CGG - Chr1:85275797-85275816 None:intergenic 20.0%
!! TAAGAGTAAGTGATAATATA+AGG + Chr1:85280484-85280503 MsG0180004988.01.T01:intron 20.0%
!! TACATGTAATGTTTAATTGT+GGG - Chr1:85279551-85279570 None:intergenic 20.0%
!! TATTACATTATGATGATATG+GGG - Chr1:85276416-85276435 None:intergenic 20.0%
!! TATTGATCAAACTTAAAACA+AGG + Chr1:85276102-85276121 MsG0180004988.01.T01:intron 20.0%
!! TCATGCATTAAATGTTAATT+AGG - Chr1:85280415-85280434 None:intergenic 20.0%
!! TGGTTTCTATTATTTAGTAA+TGG + Chr1:85277652-85277671 MsG0180004988.01.T01:intron 20.0%
!! TTACATGTAATGTTTAATTG+TGG - Chr1:85279552-85279571 None:intergenic 20.0%
!! TTATATTCACATATTTGTCA+AGG - Chr1:85275883-85275902 None:intergenic 20.0%
!!! AAGCAAATTTGACTTTTTTT+AGG + Chr1:85276476-85276495 MsG0180004988.01.T01:intron 20.0%
!!! AATACCATTATTTTGTTTTC+CGG - Chr1:85277501-85277520 None:intergenic 20.0%
!!! AGCAAATTTGACTTTTTTTA+GGG + Chr1:85276477-85276496 MsG0180004988.01.T01:intron 20.0%
!!! ATTTTCATTTATTTACACCT+TGG + Chr1:85280711-85280730 MsG0180004988.01.T01:intron 20.0%
!!! CAAAACAAAAACAATTGTTT+TGG - Chr1:85278073-85278092 None:intergenic 20.0%
!!! CTTTTTAATTTTCGAAATTG+GGG - Chr1:85278806-85278825 None:intergenic 20.0%
!!! GAAACATTTTAAAACATCAA+AGG + Chr1:85279909-85279928 MsG0180004988.01.T01:intron 20.0%
!!! GATAGATCTTCATATATTTT+AGG - Chr1:85278123-85278142 None:intergenic 20.0%
!!! TAACTACTGTTTTTTTTTTC+AGG - Chr1:85278783-85278802 None:intergenic 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG - Chr1:85278597-85278616 None:intergenic 20.0%
!!! TATTTTCATATAAGCTATCA+TGG - Chr1:85275450-85275469 None:intergenic 20.0%
!!! TTAGTCATTGATTTACTATT+TGG - Chr1:85278459-85278478 None:intergenic 20.0%
!!! TTTTTTTTTTTAACTTTCGG+GGG - Chr1:85277796-85277815 None:intergenic 20.0%
! AAAAAATCTTCAAATGGAAG+TGG + Chr1:85274738-85274757 MsG0180004988.01.T01:intron 25.0%
! AAAAATTGAAAATTGTGCTC+CGG + Chr1:85277814-85277833 MsG0180004988.01.T01:intron 25.0%
! AATACATAATTTACCAAGTC+GGG + Chr1:85276370-85276389 MsG0180004988.01.T01:intron 25.0%
! AATTCTAATGTACGGAAAAT+GGG - Chr1:85280647-85280666 None:intergenic 25.0%
! ACAACAAAATACATAATAGG+AGG + Chr1:85279282-85279301 MsG0180004988.01.T01:intron 25.0%
! ACTTACTCTTAAAGCTTATT+AGG - Chr1:85280475-85280494 None:intergenic 25.0%
! AGAATTGATTGAGTAAATTG+AGG + Chr1:85278882-85278901 MsG0180004988.01.T01:intron 25.0%
! AGTCAATACAATCCATTTAA+TGG - Chr1:85280214-85280233 None:intergenic 25.0%
! ATAATGGTATTTGTTTATCC+AGG + Chr1:85277510-85277529 MsG0180004988.01.T01:intron 25.0%
! ATATGATTCTTCACTCTATT+TGG + Chr1:85277244-85277263 MsG0180004988.01.T01:intron 25.0%
! ATGAAATAGTCATACTTAAC+AGG - Chr1:85277226-85277245 None:intergenic 25.0%
! ATTGTTAATTAGCATTCTGT+GGG + Chr1:85279455-85279474 MsG0180004988.01.T01:intron 25.0%
! ATTTAATGCATGAGTATAGA+GGG + Chr1:85280422-85280441 MsG0180004988.01.T01:intron 25.0%
! CAAAGGAAATAATAATAAGC+CGG + Chr1:85279604-85279623 MsG0180004988.01.T01:intron 25.0%
! CAAATTGTGAATAGAATAAG+AGG + Chr1:85280373-85280392 MsG0180004988.01.T01:intron 25.0%
! GTTTGATCAATACCATTATA+CGG - Chr1:85276094-85276113 None:intergenic 25.0%
! TAAAAATACCAAATTGACCT+TGG - Chr1:85277981-85278000 None:intergenic 25.0%
! TAAACAAATTTAAGCTTCAG+TGG + Chr1:85279051-85279070 MsG0180004988.01.T01:intron 25.0%
! TAATTCTAATGTACGGAAAA+TGG - Chr1:85280648-85280667 None:intergenic 25.0%
! TATTGTTAATTAGCATTCTG+TGG + Chr1:85279454-85279473 MsG0180004988.01.T01:intron 25.0%
! TCAAGTCGTTTGTTTATTTA+GGG + Chr1:85275308-85275327 MsG0180004988.01.T01:intron 25.0%
! TCTTGAGAGTGAAAATTAAA+TGG - Chr1:85278676-85278695 None:intergenic 25.0%
! TGAATCTTGGATATATAAGA+TGG - Chr1:85276263-85276282 None:intergenic 25.0%
! TTCAAGTCGTTTGTTTATTT+AGG + Chr1:85275307-85275326 MsG0180004988.01.T01:intron 25.0%
! TTCTATTATCAGTTCAACAT+AGG + Chr1:85275567-85275586 MsG0180004988.01.T01:intron 25.0%
! TTGAAAATTTGGAAACTTCT+CGG - Chr1:85275118-85275137 None:intergenic 25.0%
! TTGAACTGATAATAGAACAT+AGG - Chr1:85275564-85275583 None:intergenic 25.0%
! TTTCAATCAATTCAAGAGAA+AGG + Chr1:85274527-85274546 MsG0180004988.01.T01:CDS 25.0%
! TTTCATTATGGTTATGAGAT+TGG - Chr1:85281699-85281718 None:intergenic 25.0%
!! AAGGTCAATTTGGTATTTTT+AGG + Chr1:85277980-85277999 MsG0180004988.01.T01:intron 25.0%
!! ACAAAATGCTTTTAAGCTAT+GGG + Chr1:85276038-85276057 MsG0180004988.01.T01:intron 25.0%
!! ATTTTGTCCTGAAATTTTTG+TGG - Chr1:85280792-85280811 None:intergenic 25.0%
!! CTTTTTACTAATGTGTAAGA+CGG + Chr1:85278282-85278301 MsG0180004988.01.T01:intron 25.0%
!! GACCTAATACAATTTTTCAT+TGG - Chr1:85276660-85276679 None:intergenic 25.0%
!! GATATTGTTCATAAAGTACT+AGG - Chr1:85280875-85280894 None:intergenic 25.0%
!! TACAAAATGCTTTTAAGCTA+TGG + Chr1:85276037-85276056 MsG0180004988.01.T01:intron 25.0%
!! TCATTTTCAATGTATTCCTT+TGG - Chr1:85280317-85280336 None:intergenic 25.0%
!! TTTTATCTTGAAAAACGCAA+AGG + Chr1:85279587-85279606 MsG0180004988.01.T01:intron 25.0%
!! TTTTTGCTTATAATTGTGAC+CGG + Chr1:85278607-85278626 MsG0180004988.01.T01:intron 25.0%
!! TTTTTGCTTGTAATAGTGAT+CGG - Chr1:85278498-85278517 None:intergenic 25.0%
!!! AGGTCAATTTGGTATTTTTA+GGG + Chr1:85277981-85278000 MsG0180004988.01.T01:intron 25.0%
!!! CATCACATTGACTTTTTTTT+AGG + Chr1:85276563-85276582 MsG0180004988.01.T01:intron 25.0%
!!! CTTTGATTTTTTAAGTACCA+AGG + Chr1:85277961-85277980 MsG0180004988.01.T01:intron 25.0%
!!! GATGAAGAAGATTGTTTTTT+AGG - Chr1:85278029-85278048 None:intergenic 25.0%
!!! GTATTTTGTTGTAACATTCT+TGG - Chr1:85279274-85279293 None:intergenic 25.0%
!!! TTGATGATCTTCTTTTTCAT+GGG - Chr1:85278350-85278369 None:intergenic 25.0%
!!! TTGTATAAGTATTGAGGTTA+AGG - Chr1:85280829-85280848 None:intergenic 25.0%
!!! TTTTTTTTTTAACTTTCGGG+GGG - Chr1:85277795-85277814 None:intergenic 25.0%
AAAGTCACAAATGTATCGTT+TGG + Chr1:85279230-85279249 MsG0180004988.01.T01:intron 30.0%
AAATATTGCATATGTGCTAG+AGG + Chr1:85276957-85276976 MsG0180004988.01.T01:intron 30.0%
AACAACTAGCATATAGTTTG+AGG + Chr1:85276132-85276151 MsG0180004988.01.T01:intron 30.0%
AAGAAAGGTGATATTCAATG+TGG + Chr1:85278323-85278342 MsG0180004988.01.T01:intron 30.0%
AATAAGCTGAAAACAACTTG+CGG - Chr1:85275415-85275434 None:intergenic 30.0%
AATAGAACATAGGACCATTT+GGG - Chr1:85275554-85275573 None:intergenic 30.0%
AATCCACTAAGAAAAATTGC+AGG + Chr1:85276761-85276780 MsG0180004988.01.T01:intron 30.0%
AATGGCCAAATTTATATGCT+GGG + Chr1:85279736-85279755 MsG0180004988.01.T01:intron 30.0%
AATTCACATCCTACTAATTG+AGG - Chr1:85278836-85278855 None:intergenic 30.0%
ACAAAGGTTAGAGAATTTGA+TGG + Chr1:85274638-85274657 MsG0180004988.01.T01:intron 30.0%
ACAAATTTCTGAATGCAGAT+TGG + Chr1:85274694-85274713 MsG0180004988.01.T01:intron 30.0%
ACTAATCATAGTGTAACCTA+CGG + Chr1:85281224-85281243 MsG0180004988.01.T01:CDS 30.0%
ACTTAAAAAATCAAAGCCTC+CGG - Chr1:85277957-85277976 None:intergenic 30.0%
ACTTAGACTAGAGATTGAAA+AGG + Chr1:85278220-85278239 MsG0180004988.01.T01:intron 30.0%
AGAATAAGAGGGAAAAGATT+AGG + Chr1:85280385-85280404 MsG0180004988.01.T01:intron 30.0%
AGGTATTTGTCATTGCATTT+GGG + Chr1:85277160-85277179 MsG0180004988.01.T01:intron 30.0%
ATACATAATTTACCAAGTCG+GGG + Chr1:85276371-85276390 MsG0180004988.01.T01:intron 30.0%
ATATACTTGACGTTCTACAT+AGG - Chr1:85280737-85280756 None:intergenic 30.0%
ATGGTTTATGAAATTGATGG+AGG + Chr1:85275745-85275764 MsG0180004988.01.T01:intron 30.0%
ATTATGATGATATGGGGATT+TGG - Chr1:85276410-85276429 None:intergenic 30.0%
ATTCACATCCTACTAATTGA+GGG - Chr1:85278835-85278854 None:intergenic 30.0%
ATTCTAATGTACGGAAAATG+GGG - Chr1:85280646-85280665 None:intergenic 30.0%
ATTTCTGACTTAGTATGAGA+GGG - Chr1:85281417-85281436 None:intergenic 30.0%
CAAAAGTTCAAGCATACAAA+AGG + Chr1:85279482-85279501 MsG0180004988.01.T01:intron 30.0%
CAGCATCTATAGTATATACA+AGG - Chr1:85280897-85280916 None:intergenic 30.0%
CAGTTTGAAGAGTTAATAGA+AGG + Chr1:85281561-85281580 MsG0180004988.01.T01:CDS 30.0%
CATAAACGATTGACAGAAAA+TGG + Chr1:85279876-85279895 MsG0180004988.01.T01:intron 30.0%
CATTTAATGCATGAGTATAG+AGG + Chr1:85280421-85280440 MsG0180004988.01.T01:intron 30.0%
CATTTGTACATTTGTTCTTC+AGG + Chr1:85275619-85275638 MsG0180004988.01.T01:intron 30.0%
CCATGCATATCTATATATAG+AGG + Chr1:85280136-85280155 MsG0180004988.01.T01:intron 30.0%
CCTCTATATATAGATATGCA+TGG - Chr1:85280139-85280158 None:intergenic 30.0%
CTACATAGTTGAACGAATAA+AGG + Chr1:85282360-85282379 MsG0180004988.01.T01:CDS 30.0%
CTTAGACTAGAGATTGAAAA+GGG + Chr1:85278221-85278240 MsG0180004988.01.T01:intron 30.0%
CTTCTTATTGTCAGAAAGAT+TGG - Chr1:85275849-85275868 None:intergenic 30.0%
GAAAAAAGAGTGAAAATAGG+CGG - Chr1:85282647-85282666 None:intergenic 30.0%
GAAAAAGAGATTCCTTCAAA+GGG + Chr1:85274670-85274689 MsG0180004988.01.T01:intron 30.0%
GAATAAGAGGGAAAAGATTA+GGG + Chr1:85280386-85280405 MsG0180004988.01.T01:intron 30.0%
GCTCAAATAAGTCATTCAAA+CGG - Chr1:85275335-85275354 None:intergenic 30.0%
GGAAGGTAAAAGAATGTATA+TGG + Chr1:85276917-85276936 MsG0180004988.01.T01:intron 30.0%
GTAATCCCAGCATATAAATT+TGG - Chr1:85279744-85279763 None:intergenic 30.0%
GTCAGTATACCTTGAAAATT+TGG - Chr1:85275129-85275148 None:intergenic 30.0%
GTGTTAGTATGTTCATAGAT+TGG + Chr1:85275257-85275276 MsG0180004988.01.T01:intron 30.0%
TAAAGGATTCCAAATAGGAA+AGG + Chr1:85276701-85276720 MsG0180004988.01.T01:intron 30.0%
TAATAGAACATAGGACCATT+TGG - Chr1:85275555-85275574 None:intergenic 30.0%
TAGCATATAGTTTGAGGAAA+TGG + Chr1:85276138-85276157 MsG0180004988.01.T01:intron 30.0%
TATAAGTGTACTTCTGGATA+GGG - Chr1:85277436-85277455 None:intergenic 30.0%
TATTTCCTTGGTTGAACTAA+GGG + Chr1:85282051-85282070 MsG0180004988.01.T01:intron 30.0%
TATTTGCACAACTATACTAG+TGG - Chr1:85276354-85276373 None:intergenic 30.0%
TCATTGTAATTGCGTTTACT+GGG - Chr1:85279431-85279450 None:intergenic 30.0%
TCTTTCTGACAATAAGAAGA+TGG + Chr1:85275850-85275869 MsG0180004988.01.T01:CDS 30.0%
TGAGTATAGAGGGAAAAATT+AGG + Chr1:85280432-85280451 MsG0180004988.01.T01:intron 30.0%
TGATCAAACTTAAAACAAGG+TGG + Chr1:85276105-85276124 MsG0180004988.01.T01:intron 30.0%
TGATGACTTGACTATATCTA+TGG + Chr1:85280671-85280690 MsG0180004988.01.T01:intron 30.0%
TGGTTTATGAAATTGATGGA+GGG + Chr1:85275746-85275765 MsG0180004988.01.T01:intron 30.0%
TGTCAATCGTTTATGAGTTA+TGG - Chr1:85279871-85279890 None:intergenic 30.0%
TTCATAGTTTCATACCATAG+AGG - Chr1:85274903-85274922 None:intergenic 30.0%
TTCATTGTAATTGCGTTTAC+TGG - Chr1:85279432-85279451 None:intergenic 30.0%
TTTAAGTACCAAGGTCAATT+TGG + Chr1:85277970-85277989 MsG0180004988.01.T01:intron 30.0%
TTTCAAGCTTAACAAGAGAA+TGG - Chr1:85281094-85281113 None:intergenic 30.0%
TTTCTATGGTGATATCATAG+AGG - Chr1:85278408-85278427 None:intergenic 30.0%
TTTGAAAGTAGAGTTTGAAG+TGG + Chr1:85274557-85274576 MsG0180004988.01.T01:CDS 30.0%
! AAAATAGCGTTGAGATTAAG+AGG + Chr1:85280076-85280095 MsG0180004988.01.T01:intron 30.0%
! AATGGTAAATTCCTGTTTCT+TGG - Chr1:85281076-85281095 None:intergenic 30.0%
! ACACAACTTGTTTACATCAT+TGG - Chr1:85277308-85277327 None:intergenic 30.0%
! ACATATTCCATTTGTTGACT+TGG + Chr1:85275525-85275544 MsG0180004988.01.T01:intron 30.0%
! AGAACCTGACATGAAAATTT+TGG + Chr1:85276876-85276895 MsG0180004988.01.T01:intron 30.0%
! AGACAGATTTTACATGCTTT+TGG + Chr1:85278178-85278197 MsG0180004988.01.T01:intron 30.0%
! ATTCCATGTTTTCATGTGTA+CGG + Chr1:85281777-85281796 MsG0180004988.01.T01:intron 30.0%
! CCTTTTACGGAAAATAACAA+CGG + Chr1:85278700-85278719 MsG0180004988.01.T01:intron 30.0%
! GACATATCTATCATTTTGCA+GGG + Chr1:85280963-85280982 MsG0180004988.01.T01:intron 30.0%
! GAGAAGTTTCCAAATTTTCA+AGG + Chr1:85275117-85275136 MsG0180004988.01.T01:CDS 30.0%
! TCATTAGAGGTATAACACAT+AGG + Chr1:85279654-85279673 MsG0180004988.01.T01:intron 30.0%
! TCTAAGGTATCAATTGAGTT+TGG + Chr1:85282496-85282515 MsG0180004988.01.T01:intron 30.0%
! TGACATATCTATCATTTTGC+AGG + Chr1:85280962-85280981 MsG0180004988.01.T01:intron 30.0%
! TGTCAGTTGTATAAGTATTG+AGG - Chr1:85280835-85280854 None:intergenic 30.0%
! TTACCTGCAATTTTTCTTAG+TGG - Chr1:85276767-85276786 None:intergenic 30.0%
! TTTGTTGTAACATTCTTGGT+TGG - Chr1:85279270-85279289 None:intergenic 30.0%
! TTTTCTAACACTTACACTTC+CGG - Chr1:85277850-85277869 None:intergenic 30.0%
!! AGAAGTATGCTTCTAAGATT+AGG - Chr1:85277123-85277142 None:intergenic 30.0%
!! GAAGTATGCTTCTAAGATTA+GGG - Chr1:85277122-85277141 None:intergenic 30.0%
!! TGCTTTACTTTTCATGTCAT+TGG + Chr1:85277632-85277651 MsG0180004988.01.T01:intron 30.0%
!! TGTCATGTTTCTAGAATGAT+TGG + Chr1:85276319-85276338 MsG0180004988.01.T01:intron 30.0%
!!! CATTATTTTGTTTTCCGGAT+GGG - Chr1:85277496-85277515 None:intergenic 30.0%
!!! CTTTCTTGAGGTTTTGAAAT+GGG + Chr1:85277063-85277082 MsG0180004988.01.T01:intron 30.0%
!!! GCTTCAATTTTTTGGCATAA+TGG - Chr1:85277714-85277733 None:intergenic 30.0%
!!! GGTCAATTTGGTATTTTTAG+GGG + Chr1:85277982-85278001 MsG0180004988.01.T01:intron 30.0%
!!! GTCAATTTGGTATTTTTAGG+GGG + Chr1:85277983-85278002 MsG0180004988.01.T01:intron 30.0%
!!! GTTGATGATCTTCTTTTTCA+TGG - Chr1:85278351-85278370 None:intergenic 30.0%
!!! TTTGAAATGGGAAGCATTTT+CGG + Chr1:85277075-85277094 MsG0180004988.01.T01:intron 30.0%
AAACAACAAAGAAAACAGCG+AGG + Chr1:85279786-85279805 MsG0180004988.01.T01:intron 35.0%
AAAGTGGTAGACTTGAAACA+GGG + Chr1:85282180-85282199 MsG0180004988.01.T01:intron 35.0%
AAATACCTCTCTTCTGTGAT+TGG - Chr1:85277148-85277167 None:intergenic 35.0%
AACCCTAACATATGTGCAAA+CGG - Chr1:85277540-85277559 None:intergenic 35.0%
AACTGCTGCATCAACAATAA+GGG - Chr1:85282607-85282626 None:intergenic 35.0%
AAGAAGAAATTCCAAGACCT+TGG + Chr1:85280620-85280639 MsG0180004988.01.T01:intron 35.0%
AAGGTGCAATTCATCAATGA+GGG + Chr1:85277757-85277776 MsG0180004988.01.T01:intron 35.0%
AATGTCTTATCGAACTCTTC+AGG + Chr1:85275074-85275093 MsG0180004988.01.T01:CDS 35.0%
AATTGTAGGAACTCCAGTTT+GGG - Chr1:85281507-85281526 None:intergenic 35.0%
AATTTCTGAATGCAGATTGG+AGG + Chr1:85274697-85274716 MsG0180004988.01.T01:intron 35.0%
ACAGAAGGAAACAACAATCA+AGG + Chr1:85279945-85279964 MsG0180004988.01.T01:intron 35.0%
ACTACTTGACACAGTTACAA+CGG - Chr1:85276169-85276188 None:intergenic 35.0%
ACTCAAGAGTAAAGCAATAC+CGG - Chr1:85279626-85279645 None:intergenic 35.0%
AGCACAAACCAATTCATTTC+TGG + Chr1:85279686-85279705 MsG0180004988.01.T01:intron 35.0%
AGTAGTTACCCTCAATTAGT+AGG + Chr1:85278824-85278843 MsG0180004988.01.T01:intron 35.0%
AGTGACATTTCCTTACTCAA+AGG - Chr1:85282016-85282035 None:intergenic 35.0%
ATGCCAAAAAATTGAAGCAG+TGG + Chr1:85277716-85277735 MsG0180004988.01.T01:intron 35.0%
ATGTCAATGCTAATGTAGTG+TGG - Chr1:85280948-85280967 None:intergenic 35.0%
ATGTGGACAAAAAATGTTGC+AGG + Chr1:85282687-85282706 MsG0180004988.01.T01:CDS 35.0%
ATTGCATTTGGGAGTAAAGA+AGG + Chr1:85277171-85277190 MsG0180004988.01.T01:intron 35.0%
CAAATTTGAAAACCTGCATC+CGG + Chr1:85277871-85277890 MsG0180004988.01.T01:intron 35.0%
CAAGATTCACAAGATGAGTT+TGG - Chr1:85281337-85281356 None:intergenic 35.0%
CAATGGCCAAATTTATATGC+TGG + Chr1:85279735-85279754 MsG0180004988.01.T01:intron 35.0%
CAATGTTTAGTAGGATTGGA+CGG - Chr1:85276847-85276866 None:intergenic 35.0%
CACAGATGTATGTATGTAAC+AGG - Chr1:85276738-85276757 None:intergenic 35.0%
CACATGAAAACATGGAATGA+AGG - Chr1:85281775-85281794 None:intergenic 35.0%
CCATCCGGAAAACAAAATAA+TGG + Chr1:85277494-85277513 MsG0180004988.01.T01:intron 35.0%
CCATTTCAAAACCTCAAGAA+AGG - Chr1:85277065-85277084 None:intergenic 35.0%
CCTTGTCAAATCACTATATG+CGG + Chr1:85276524-85276543 MsG0180004988.01.T01:intron 35.0%
CTAGTATAGTCCTTTCTGAA+GGG - Chr1:85276793-85276812 None:intergenic 35.0%
CTATAAGTGTACTTCTGGAT+AGG - Chr1:85277437-85277456 None:intergenic 35.0%
CTATTTCCTTGGTTGAACTA+AGG + Chr1:85282050-85282069 MsG0180004988.01.T01:intron 35.0%
CTCAATCAATTCTCTCAAAG+AGG - Chr1:85278875-85278894 None:intergenic 35.0%
CTTGGTTATATCGATGAGAA+TGG + Chr1:85282331-85282350 MsG0180004988.01.T01:CDS 35.0%
GACTGATGTTCTTTGGATTT+GGG + Chr1:85281799-85281818 MsG0180004988.01.T01:intron 35.0%
GAGAATTTGATGGAAAAACC+AGG + Chr1:85274648-85274667 MsG0180004988.01.T01:intron 35.0%
GAGTAGTATCCTTTCCTATT+TGG - Chr1:85276713-85276732 None:intergenic 35.0%
GATAATGACTCACACAATGA+TGG + Chr1:85278650-85278669 MsG0180004988.01.T01:intron 35.0%
GATTTCTGACTTAGTATGAG+AGG - Chr1:85281418-85281437 None:intergenic 35.0%
GCTATGGGCATTTATCAATT+AGG + Chr1:85276053-85276072 MsG0180004988.01.T01:intron 35.0%
GGAAAAAGAGATTCCTTCAA+AGG + Chr1:85274669-85274688 MsG0180004988.01.T01:intron 35.0%
GGAATATGAAAATGAACTGC+CGG + Chr1:85277921-85277940 MsG0180004988.01.T01:intron 35.0%
GGCAGAAAGAAGTTGAATAT+AGG + Chr1:85280097-85280116 MsG0180004988.01.T01:intron 35.0%
GGGATGGTTTATGAAATTGA+TGG + Chr1:85275742-85275761 MsG0180004988.01.T01:intron 35.0%
GGTATCAATTGAGTTTGGAA+CGG + Chr1:85282501-85282520 MsG0180004988.01.T01:intron 35.0%
GTCCAATCCTACTAAACATT+GGG + Chr1:85276846-85276865 MsG0180004988.01.T01:intron 35.0%
GTTGCTAAAGGATTCCAAAT+AGG + Chr1:85276696-85276715 MsG0180004988.01.T01:intron 35.0%
TAACTGCTGCATCAACAATA+AGG - Chr1:85282608-85282627 None:intergenic 35.0%
TACCACTTTGCACAAAAAGT+TGG - Chr1:85282169-85282188 None:intergenic 35.0%
TACCGTTTGCACATATGTTA+GGG + Chr1:85277535-85277554 MsG0180004988.01.T01:intron 35.0%
TAGGGTGCATTATATCATAG+AGG - Chr1:85277418-85277437 None:intergenic 35.0%
TCAAGTCATTCAATTTGTGC+AGG + Chr1:85282781-85282800 MsG0180004988.01.T01:CDS 35.0%
TCCTGAAGAGTAAAGTATAG+CGG - Chr1:85281640-85281659 None:intergenic 35.0%
TCGCTAAAATTCTGTATGCT+TGG - Chr1:85280249-85280268 None:intergenic 35.0%
TCTCAAAGAGGATATAGAGA+CGG - Chr1:85278863-85278882 None:intergenic 35.0%
TCTGATCAGTTACCGTATAA+TGG + Chr1:85276079-85276098 MsG0180004988.01.T01:intron 35.0%
TCTTATCGAAATCAATGTCG+AGG + Chr1:85276204-85276223 MsG0180004988.01.T01:intron 35.0%
TGAGTCTCAAATGTCATTAG+AGG + Chr1:85279641-85279660 MsG0180004988.01.T01:intron 35.0%
TGCAATGCTAATGTTGCTAA+AGG + Chr1:85276684-85276703 MsG0180004988.01.T01:intron 35.0%
TGCTAGCAATGAATATGATG+TGG + Chr1:85275502-85275521 MsG0180004988.01.T01:intron 35.0%
TGGAAGTGGAATACAAAGTA+TGG + Chr1:85274752-85274771 MsG0180004988.01.T01:intron 35.0%
TGGCATAATGGTAAGCTAAT+TGG - Chr1:85277702-85277721 None:intergenic 35.0%
TGTGATGCAACATATCATTG+AGG - Chr1:85276550-85276569 None:intergenic 35.0%
TGTGGACAAAAAATGTTGCA+GGG + Chr1:85282688-85282707 MsG0180004988.01.T01:CDS 35.0%
TTAATGGCCACATGGAAAAT+AGG - Chr1:85280198-85280217 None:intergenic 35.0%
TTACCGTTTGCACATATGTT+AGG + Chr1:85277534-85277553 MsG0180004988.01.T01:intron 35.0%
TTCACTCACAAGAATAGTTG+AGG + Chr1:85276988-85277007 MsG0180004988.01.T01:intron 35.0%
TTGAATGTTGTCTAGTCTCA+AGG + Chr1:85280593-85280612 MsG0180004988.01.T01:intron 35.0%
TTGAGTAAGGAAATGTCACT+GGG + Chr1:85282016-85282035 MsG0180004988.01.T01:intron 35.0%
TTGCTGGAAAATATCGTTTC+TGG + Chr1:85275903-85275922 MsG0180004988.01.T01:CDS 35.0%
TTGGCTAATACTATCAACGT+TGG - Chr1:85280298-85280317 None:intergenic 35.0%
TTGTAACTGTGTCAAGTAGT+TGG + Chr1:85276169-85276188 MsG0180004988.01.T01:intron 35.0%
TTGTTCTCCCAATGTTTAGT+AGG - Chr1:85276856-85276875 None:intergenic 35.0%
TTTCAAAACCTCAAGAAAGG+AGG - Chr1:85277062-85277081 None:intergenic 35.0%
TTTCGGTATTTGTCGTGAAA+GGG + Chr1:85277092-85277111 MsG0180004988.01.T01:intron 35.0%
TTTGAGTAAGGAAATGTCAC+TGG + Chr1:85282015-85282034 MsG0180004988.01.T01:intron 35.0%
TTTGCACATATGTTAGGGTT+GGG + Chr1:85277540-85277559 MsG0180004988.01.T01:intron 35.0%
! AAAGTTGCCTATTTTCCATG+TGG + Chr1:85280188-85280207 MsG0180004988.01.T01:intron 35.0%
! AACTGCAACAATTGATTCAG+AGG + Chr1:85282289-85282308 MsG0180004988.01.T01:intron 35.0%
! AGTTCAGAAAGCTATTTCCT+TGG + Chr1:85282039-85282058 MsG0180004988.01.T01:intron 35.0%
! CAGAAATTTGTTCCCTTTGA+AGG - Chr1:85274685-85274704 None:intergenic 35.0%
! CGATTCTGTTGAATTTTGCA+TGG + Chr1:85280266-85280285 MsG0180004988.01.T01:intron 35.0%
! CTCTCAAGAGTAACCTTTTA+CGG + Chr1:85278687-85278706 MsG0180004988.01.T01:intron 35.0%
! GAGGTATTTGTCATTGCATT+TGG + Chr1:85277159-85277178 MsG0180004988.01.T01:intron 35.0%
! GTGATTTTGTCTACCTAAGA+AGG + Chr1:85281973-85281992 MsG0180004988.01.T01:intron 35.0%
! GTTCATAGATTGGCTCAATT+TGG + Chr1:85275267-85275286 MsG0180004988.01.T01:intron 35.0%
! GTTTTGCAGATAAGAGTTCA+CGG - Chr1:85275037-85275056 None:intergenic 35.0%
! TCCAGAAGTACACTTATAGA+CGG + Chr1:85277438-85277457 MsG0180004988.01.T01:intron 35.0%
! TCTTGATGATCTACACACAA+AGG + Chr1:85274622-85274641 MsG0180004988.01.T01:CDS 35.0%
! TTCCAACTTTTTGTGCAAAG+TGG + Chr1:85282164-85282183 MsG0180004988.01.T01:intron 35.0%
! TTGAAGGAATCTCTTTTTCC+TGG - Chr1:85274669-85274688 None:intergenic 35.0%
! TTTTCCATGTGGCCATTAAA+TGG + Chr1:85280199-85280218 MsG0180004988.01.T01:intron 35.0%
! TTTTCGGTATTTGTCGTGAA+AGG + Chr1:85277091-85277110 MsG0180004988.01.T01:intron 35.0%
! TTTTGCAGGGAAAAAATGTC+AGG + Chr1:85280976-85280995 MsG0180004988.01.T01:intron 35.0%
! TTTTGTCTACCTAAGAAGGT+TGG + Chr1:85281977-85281996 MsG0180004988.01.T01:intron 35.0%
!! ACATGAAAATTTTGGCGCAA+TGG + Chr1:85276884-85276903 MsG0180004988.01.T01:intron 35.0%
!! ACGTTGATAGTATTAGCCAA+AGG + Chr1:85280298-85280317 MsG0180004988.01.T01:intron 35.0%
!! ATTGTTGTTTCCTTCTGTTG+AGG - Chr1:85279943-85279962 None:intergenic 35.0%
!! GACATTGATTTCGATAAGAC+AGG - Chr1:85276203-85276222 None:intergenic 35.0%
!! GAGACGAATCGATTTTTCTA+TGG - Chr1:85278422-85278441 None:intergenic 35.0%
!! GGATTGTATTGACTGCATTT+AGG + Chr1:85280220-85280239 MsG0180004988.01.T01:intron 35.0%
!! TATCTATATATAGAGGCGTC+TGG + Chr1:85280143-85280162 MsG0180004988.01.T01:intron 35.0%
!!! AGTCCACTGCTTCAATTTTT+TGG - Chr1:85277722-85277741 None:intergenic 35.0%
!!! CAGTTTTAATTCGTCCTCTA+TGG + Chr1:85274886-85274905 MsG0180004988.01.T01:intron 35.0%
!!! CCATTATTTTGTTTTCCGGA+TGG - Chr1:85277497-85277516 None:intergenic 35.0%
!!! CCGTTGTTATTTTCCGTAAA+AGG - Chr1:85278703-85278722 None:intergenic 35.0%
!!! CCTTTCTTGAGGTTTTGAAA+TGG + Chr1:85277062-85277081 MsG0180004988.01.T01:intron 35.0%
!!! GAATTGCACCTTGTTTTCAA+AGG - Chr1:85277749-85277768 None:intergenic 35.0%
AAAACATGGAATGAAGGCGA+GGG - Chr1:85281769-85281788 None:intergenic 40.0%
AAAAGAGTGAAAATAGGCGG+AGG - Chr1:85282644-85282663 None:intergenic 40.0%
AAAGAAGCTTTCAGTTGCTG+AGG - Chr1:85274806-85274825 None:intergenic 40.0%
AAAGAGTGAAAATAGGCGGA+GGG - Chr1:85282643-85282662 None:intergenic 40.0%
AAATTACCATGTACTCCCTC+CGG - Chr1:85278629-85278648 None:intergenic 40.0%
AAGGAGCTAATCAAGCACAA+AGG + Chr1:85282379-85282398 MsG0180004988.01.T01:CDS 40.0%
AATCAGCTTTCCACATGCTT+TGG - Chr1:85282146-85282165 None:intergenic 40.0%
ACCAGCAGAGAGTTTCATTA+TGG - Chr1:85281711-85281730 None:intergenic 40.0%
ACCATAATGAAACTCTCTGC+TGG + Chr1:85281707-85281726 MsG0180004988.01.T01:intron 40.0%
ACTGCTGCATCAACAATAAG+GGG - Chr1:85282606-85282625 None:intergenic 40.0%
ACTTTACTCTTCAGGACTAC+TGG + Chr1:85281644-85281663 MsG0180004988.01.T01:CDS 40.0%
AGAGAGTTATGGTTGCAAAG+CGG + Chr1:85282227-85282246 MsG0180004988.01.T01:intron 40.0%
AGGAAACAACAATCAAGGTG+AGG + Chr1:85279950-85279969 MsG0180004988.01.T01:intron 40.0%
AGGAGCTAATCAAGCACAAA+GGG + Chr1:85282380-85282399 MsG0180004988.01.T01:CDS 40.0%
AGGGAAAAAATGTCAGGAGA+GGG + Chr1:85280982-85281001 MsG0180004988.01.T01:intron 40.0%
AGGGTTGAAGATGAAGAAAC+TGG + Chr1:85282707-85282726 MsG0180004988.01.T01:CDS 40.0%
AGTCCGTACACATGAAAACA+TGG - Chr1:85281783-85281802 None:intergenic 40.0%
ATATGTGCAAACGGTAAACC+TGG - Chr1:85277531-85277550 None:intergenic 40.0%
ATATGTTAGGGTTGGGACTT+GGG + Chr1:85277547-85277566 MsG0180004988.01.T01:intron 40.0%
ATCCAAGATTCATTACTGCG+TGG + Chr1:85276271-85276290 MsG0180004988.01.T01:intron 40.0%
ATGAACACTTGTGAGACTGT+TGG + Chr1:85275367-85275386 MsG0180004988.01.T01:intron 40.0%
ATGGAACTTGACCCTCAAAA+TGG + Chr1:85274771-85274790 MsG0180004988.01.T01:intron 40.0%
ATTATGTGCCTCCTTTCTTG+AGG + Chr1:85277051-85277070 MsG0180004988.01.T01:intron 40.0%
CAAAGTGGTAGACTTGAAAC+AGG + Chr1:85282179-85282198 MsG0180004988.01.T01:intron 40.0%
CAAGGTGCAATTCATCAATG+AGG + Chr1:85277756-85277775 MsG0180004988.01.T01:intron 40.0%
CAATCCATTTAATGGCCACA+TGG - Chr1:85280206-85280225 None:intergenic 40.0%
CACCAGAAGAGTTACACAAA+TGG + Chr1:85281480-85281499 MsG0180004988.01.T01:CDS 40.0%
CATATGGGATTTCTTGTGTC+AGG + Chr1:85282542-85282561 MsG0180004988.01.T01:intron 40.0%
CATCACACTCAGTCATGTAA+GGG - Chr1:85276448-85276467 None:intergenic 40.0%
CCGCATATAGTGATTTGACA+AGG - Chr1:85276527-85276546 None:intergenic 40.0%
CGTCCAATCCTACTAAACAT+TGG + Chr1:85276845-85276864 MsG0180004988.01.T01:intron 40.0%
CTACTTGACACAGTTACAAC+GGG - Chr1:85276168-85276187 None:intergenic 40.0%
CTCAAAGAGGATATAGAGAC+GGG - Chr1:85278862-85278881 None:intergenic 40.0%
CTCCCAATGTTTAGTAGGAT+TGG - Chr1:85276851-85276870 None:intergenic 40.0%
CTCTCTGTGACTTTCTTATG+TGG + Chr1:85282670-85282689 MsG0180004988.01.T01:CDS 40.0%
CTTAGCATTTGCGAACTGAA+CGG - Chr1:85275824-85275843 None:intergenic 40.0%
CTTCAGGAGTTATGAACTGA+TGG + Chr1:85275635-85275654 MsG0180004988.01.T01:intron 40.0%
CTTTGGTGGGATTTCATGTT+TGG - Chr1:85281117-85281136 None:intergenic 40.0%
GAATTGTAGGAACTCCAGTT+TGG - Chr1:85281508-85281527 None:intergenic 40.0%
GACCATTTGTGTAACTCTTC+TGG - Chr1:85281485-85281504 None:intergenic 40.0%
GAGTAACACAGCTAAGCATA+TGG - Chr1:85281367-85281386 None:intergenic 40.0%
GATTCACAAGATGAGTTTGG+AGG - Chr1:85281334-85281353 None:intergenic 40.0%
GCTAGTATAGTCCTTTCTGA+AGG - Chr1:85276794-85276813 None:intergenic 40.0%
GGAAACAACAATCAAGGTGA+GGG + Chr1:85279951-85279970 MsG0180004988.01.T01:intron 40.0%
GGACTGATGTTCTTTGGATT+TGG + Chr1:85281798-85281817 MsG0180004988.01.T01:intron 40.0%
GGCATAAAGTCTCTCATCTT+TGG - Chr1:85275717-85275736 None:intergenic 40.0%
GTAGCCACTCTGTTATCAAA+TGG - Chr1:85281050-85281069 None:intergenic 40.0%
GTGAAACATGCTAGCAAAGA+TGG + Chr1:85281948-85281967 MsG0180004988.01.T01:intron 40.0%
GTTCAGTTCGCAAATGCTAA+GGG + Chr1:85275823-85275842 MsG0180004988.01.T01:intron 40.0%
GTTTGCACATATGTTAGGGT+TGG + Chr1:85277539-85277558 MsG0180004988.01.T01:intron 40.0%
TAACAGGAACTTTATGCCAC+AGG - Chr1:85277210-85277229 None:intergenic 40.0%
TACACGGGAAACTTTAGTGA+CGG + Chr1:85279352-85279371 MsG0180004988.01.T01:intron 40.0%
TACTTGACACAGTTACAACG+GGG - Chr1:85276167-85276186 None:intergenic 40.0%
TAGCATGTTTCACCAATGAG+TGG - Chr1:85281941-85281960 None:intergenic 40.0%
TCATCCGTTGAAGAAGAATC+TGG + Chr1:85281011-85281030 MsG0180004988.01.T01:CDS 40.0%
TCCAGGACTTGAGATTGAAA+AGG + Chr1:85281288-85281307 MsG0180004988.01.T01:CDS 40.0%
TCTTCATACACGACGTTAGA+CGG + Chr1:85279326-85279345 MsG0180004988.01.T01:intron 40.0%
TGAACACTTGTGAGACTGTT+GGG + Chr1:85275368-85275387 MsG0180004988.01.T01:intron 40.0%
TGCATCCGGTATATACATTC+CGG + Chr1:85277885-85277904 MsG0180004988.01.T01:intron 40.0%
TGCTTATAATTGTGACCGGA+GGG + Chr1:85278611-85278630 MsG0180004988.01.T01:intron 40.0%
TGCTTGTAATAGTGATCGGA+GGG - Chr1:85278494-85278513 None:intergenic 40.0%
TGGAACTTGACCCTCAAAAT+GGG + Chr1:85274772-85274791 MsG0180004988.01.T01:intron 40.0%
TGGGTTTCCAAGTCAACAAA+TGG - Chr1:85275535-85275554 None:intergenic 40.0%
TGTGAAAGATGAGAGTTGCA+AGG - Chr1:85280564-85280583 None:intergenic 40.0%
TTAATGAAGTTGCTGCATCG+TGG - Chr1:85274842-85274861 None:intergenic 40.0%
TTACACAAATGGTCCCAAAC+TGG + Chr1:85281491-85281510 MsG0180004988.01.T01:CDS 40.0%
TTCCACGCAGTAATGAATCT+TGG - Chr1:85276276-85276295 None:intergenic 40.0%
TTCCTACAATTCTCACCTCT+GGG + Chr1:85281516-85281535 MsG0180004988.01.T01:CDS 40.0%
TTCGCCAGATTCTTCTTCAA+CGG - Chr1:85281018-85281037 None:intergenic 40.0%
TTGCTTATAATTGTGACCGG+AGG + Chr1:85278610-85278629 MsG0180004988.01.T01:intron 40.0%
TTGCTTGTAATAGTGATCGG+AGG - Chr1:85278495-85278514 None:intergenic 40.0%
TTGGAAACTTCTCGGTAAAC+AGG - Chr1:85275110-85275129 None:intergenic 40.0%
TTTCATAAACCATCCCTCTG+AGG - Chr1:85275738-85275757 None:intergenic 40.0%
! AACTGCCGGATTTTATGTAC+CGG + Chr1:85277935-85277954 MsG0180004988.01.T01:intron 40.0%
! ATTGATTCAGAGGTTGGTTG+AGG + Chr1:85282299-85282318 MsG0180004988.01.T01:intron 40.0%
! CCAGAAGTACACTTATAGAC+GGG + Chr1:85277439-85277458 MsG0180004988.01.T01:intron 40.0%
! GCAACAATTGATTCAGAGGT+TGG + Chr1:85282293-85282312 MsG0180004988.01.T01:intron 40.0%
! TATGGACTAACAGAAGTGGT+GGG + Chr1:85282079-85282098 MsG0180004988.01.T01:intron 40.0%
! TATTCCACATTTTGCTCCTC+CGG - Chr1:85277907-85277926 None:intergenic 40.0%
! TATTTTCAATCTCCCATGGC+TGG - Chr1:85280062-85280081 None:intergenic 40.0%
! TCATTCGGATTTTACCCATC+CGG + Chr1:85277479-85277498 MsG0180004988.01.T01:intron 40.0%
! TCATTGGTTGCCTAGTGATT+CGG - Chr1:85276644-85276663 None:intergenic 40.0%
! TGCGCCAAAATTTTCATGTC+AGG - Chr1:85276883-85276902 None:intergenic 40.0%
! TGTCCTGAAATTTTTGTGGC+CGG - Chr1:85280788-85280807 None:intergenic 40.0%
! TTATGGACTAACAGAAGTGG+TGG + Chr1:85282078-85282097 MsG0180004988.01.T01:intron 40.0%
! TTGATGATAGAAGCCGAAAG+TGG + Chr1:85274997-85275016 MsG0180004988.01.T01:intron 40.0%
!! AATCAAGCACAAAGGGTATC+AGG + Chr1:85282387-85282406 MsG0180004988.01.T01:CDS 40.0%
!! ACGCTATTTTCAATCTCCCA+TGG - Chr1:85280066-85280085 None:intergenic 40.0%
!! TATCGTTTCTGGAACAGAAC+TGG + Chr1:85275914-85275933 MsG0180004988.01.T01:CDS 40.0%
!! TGTTGACTTGGAAACCCAAA+TGG + Chr1:85275537-85275556 MsG0180004988.01.T01:intron 40.0%
!!! ACTATACTAGCCTTTTTCGC+AGG + Chr1:85276803-85276822 MsG0180004988.01.T01:intron 40.0%
AAAATGTCAGGAGAGGGAGT+TGG + Chr1:85280988-85281007 MsG0180004988.01.T01:intron 45.0%
AACAAAGAAAACAGCGAGGC+TGG + Chr1:85279790-85279809 MsG0180004988.01.T01:intron 45.0%
AACTCTCTTCCTTGAGTGGA+GGG - Chr1:85282215-85282234 None:intergenic 45.0%
AACTTGACCCTCAAAATGGG+GGG + Chr1:85274775-85274794 MsG0180004988.01.T01:intron 45.0%
AAGAAACTGGCAGATACCGA+TGG + Chr1:85282720-85282739 MsG0180004988.01.T01:CDS 45.0%
AAGAGTGAAAATAGGCGGAG+GGG - Chr1:85282642-85282661 None:intergenic 45.0%
ACAACGGACATCTTATTCCG+AGG + Chr1:85278716-85278735 MsG0180004988.01.T01:intron 45.0%
ACACGGGAAACTTTAGTGAC+GGG + Chr1:85279353-85279372 MsG0180004988.01.T01:intron 45.0%
ACTGCGTGGAACTTTAGTGT+AGG + Chr1:85276285-85276304 MsG0180004988.01.T01:intron 45.0%
ACTGTGATGCATGAAACTGC+AGG + Chr1:85276614-85276633 MsG0180004988.01.T01:intron 45.0%
AGCCTCCGGTACATAAAATC+CGG - Chr1:85277943-85277962 None:intergenic 45.0%
AGGACTACTGGAGTAAGCAA+AGG + Chr1:85281656-85281675 MsG0180004988.01.T01:intron 45.0%
AGGGGGCCTAAAGAGATATT+GGG + Chr1:85278000-85278019 MsG0180004988.01.T01:intron 45.0%
ATCCGGTATATACATTCCGG+AGG + Chr1:85277888-85277907 MsG0180004988.01.T01:intron 45.0%
ATGAAATCAGGAGCCAAGAG+TGG - Chr1:85282816-85282835 None:intergenic 45.0%
ATGCTAATGTAGTGTGGCTG+TGG - Chr1:85280942-85280961 None:intergenic 45.0%
CAAGTCGGGGAATACTATTC+AGG + Chr1:85276384-85276403 MsG0180004988.01.T01:intron 45.0%
CAGGGAAAAAATGTCAGGAG+AGG + Chr1:85280981-85281000 MsG0180004988.01.T01:intron 45.0%
CAGGTAAACACCCTTCAGAA+AGG + Chr1:85276780-85276799 MsG0180004988.01.T01:intron 45.0%
CATATGTTAGGGTTGGGACT+TGG + Chr1:85277546-85277565 MsG0180004988.01.T01:intron 45.0%
CATCAGCAAGATCTCCTTGT+GGG - Chr1:85281178-85281197 None:intergenic 45.0%
CATGACAGGCAACGAGAAAA+TGG - Chr1:85275949-85275968 None:intergenic 45.0%
CCACTCAAGGAAGAGAGTTA+TGG + Chr1:85282216-85282235 MsG0180004988.01.T01:intron 45.0%
CCATAACTCTCTTCCTTGAG+TGG - Chr1:85282219-85282238 None:intergenic 45.0%
CCATATTTCCGATGTGTGTG+CGG + Chr1:85277011-85277030 MsG0180004988.01.T01:intron 45.0%
CCCGTCTATAAGTGTACTTC+TGG - Chr1:85277442-85277461 None:intergenic 45.0%
CGTTCAGTTCGCAAATGCTA+AGG + Chr1:85275822-85275841 MsG0180004988.01.T01:intron 45.0%
CTAAGCTCATCCAAAGCATG+TGG + Chr1:85282133-85282152 MsG0180004988.01.T01:intron 45.0%
CTAGCTACGTTTCACTCTCT+TGG + Chr1:85280762-85280781 MsG0180004988.01.T01:intron 45.0%
CTCCTCCGGAATGTATATAC+CGG - Chr1:85277893-85277912 None:intergenic 45.0%
CTGAATAGTATTCCCCGACT+TGG - Chr1:85276386-85276405 None:intergenic 45.0%
CTGACTTAGTATGAGAGGGT+TGG - Chr1:85281413-85281432 None:intergenic 45.0%
CTGCGTGGAACTTTAGTGTA+GGG + Chr1:85276286-85276305 MsG0180004988.01.T01:intron 45.0%
CTGGAACAAAGCTGTTGCAA+GGG - Chr1:85281273-85281292 None:intergenic 45.0%
CTTCATACACGACGTTAGAC+GGG + Chr1:85279327-85279346 MsG0180004988.01.T01:intron 45.0%
GAAAACATGGAATGAAGGCG+AGG - Chr1:85281770-85281789 None:intergenic 45.0%
GAACTTGACCCTCAAAATGG+GGG + Chr1:85274774-85274793 MsG0180004988.01.T01:intron 45.0%
GAGAGACTTTATGCCTCAGA+GGG + Chr1:85275722-85275741 MsG0180004988.01.T01:intron 45.0%
GCATCACACTCAGTCATGTA+AGG - Chr1:85276449-85276468 None:intergenic 45.0%
GCCACTCTGTTATCAAATGG+AGG - Chr1:85281047-85281066 None:intergenic 45.0%
GCCGCTATACTTTACTCTTC+AGG + Chr1:85281636-85281655 MsG0180004988.01.T01:CDS 45.0%
GGAACTTGACCCTCAAAATG+GGG + Chr1:85274773-85274792 MsG0180004988.01.T01:intron 45.0%
GGAATGTATATACCGGATGC+AGG - Chr1:85277886-85277905 None:intergenic 45.0%
GTGGCTACAATCCAAGAAAC+AGG + Chr1:85281062-85281081 MsG0180004988.01.T01:CDS 45.0%
GTTCCTACAATTCTCACCTC+TGG + Chr1:85281515-85281534 MsG0180004988.01.T01:CDS 45.0%
TAACTCTCTTCCTTGAGTGG+AGG - Chr1:85282216-85282235 None:intergenic 45.0%
TAGGGGGCCTAAAGAGATAT+TGG + Chr1:85277999-85278018 MsG0180004988.01.T01:intron 45.0%
TCAATGTTACGTCCAGCCAT+GGG + Chr1:85280047-85280066 MsG0180004988.01.T01:intron 45.0%
TCATTCAATTTGTGCAGGCC+AGG + Chr1:85282786-85282805 MsG0180004988.01.T01:CDS 45.0%
TCTCTCCAATCACAGAAGAG+AGG + Chr1:85277140-85277159 MsG0180004988.01.T01:intron 45.0%
TGAGAGACTTTATGCCTCAG+AGG + Chr1:85275721-85275740 MsG0180004988.01.T01:intron 45.0%
TGCTGGGATTACGTATATGC+AGG + Chr1:85279752-85279771 MsG0180004988.01.T01:intron 45.0%
TGTTGGGAGAGCTTATAGCA+TGG + Chr1:85275384-85275403 MsG0180004988.01.T01:intron 45.0%
TTCACCAATGAGTGGATCAC+TGG - Chr1:85281933-85281952 None:intergenic 45.0%
TTCATACACGACGTTAGACG+GGG + Chr1:85279328-85279347 MsG0180004988.01.T01:intron 45.0%
TTCCTTGGTTGAACTAAGGG+CGG + Chr1:85282054-85282073 MsG0180004988.01.T01:intron 45.0%
TTCTCGTTGCCTGTCATGAT+TGG + Chr1:85275951-85275970 MsG0180004988.01.T01:CDS 45.0%
TTGACGTTCTACATAGGCCA+AGG - Chr1:85280731-85280750 None:intergenic 45.0%
TTTCCTTCTGTTGAGGTCTC+AGG - Chr1:85279936-85279955 None:intergenic 45.0%
! AGAGTTGCAGTGTTGAGATC+TGG - Chr1:85281140-85281159 None:intergenic 45.0%
! CATTGGTTGCCTAGTGATTC+GGG - Chr1:85276643-85276662 None:intergenic 45.0%
! GACTCACGCCTTTGAAAACA+AGG + Chr1:85277738-85277757 MsG0180004988.01.T01:intron 45.0%
! GCCTCCATTTGATAACAGAG+TGG + Chr1:85281043-85281062 MsG0180004988.01.T01:CDS 45.0%
! GCCTTTTCAATCTCAAGTCC+TGG - Chr1:85281292-85281311 None:intergenic 45.0%
! GCTTAGCTGTGTTACTCAGT+TGG + Chr1:85281370-85281389 MsG0180004988.01.T01:CDS 45.0%
! GGGTTATGGACTAACAGAAG+TGG + Chr1:85282075-85282094 MsG0180004988.01.T01:intron 45.0%
! GTGTACGGACTGATGTTCTT+TGG + Chr1:85281792-85281811 MsG0180004988.01.T01:intron 45.0%
!! TGTTGAGATCTGGCTTTGGT+GGG - Chr1:85281130-85281149 None:intergenic 45.0%
!! TTTTTCGCAGGAAGCATGCA+CGG + Chr1:85276815-85276834 MsG0180004988.01.T01:intron 45.0%
!!! TTTTTTTTTTTTTTAACTTT+CGG - Chr1:85277799-85277818 None:intergenic 5.0%
ACCAATGAGTGGATCACTGG+TGG - Chr1:85281930-85281949 None:intergenic 50.0%
ACCGATGGCATATGTGGTGA+GGG + Chr1:85282735-85282754 MsG0180004988.01.T01:CDS 50.0%
ACTTGACCCTCAAAATGGGG+GGG + Chr1:85274776-85274795 MsG0180004988.01.T01:intron 50.0%
AGAGTTGCCACATGTTCCTG+TGG + Chr1:85281599-85281618 MsG0180004988.01.T01:CDS 50.0%
AGCACAGATTCCAGTTCTGC+AGG - Chr1:85282573-85282592 None:intergenic 50.0%
AGGCCCCCCAATATCTCTTT+AGG - Chr1:85278009-85278028 None:intergenic 50.0%
AGGTTCAGCAGCATTTCCTG+TGG + Chr1:85277191-85277210 MsG0180004988.01.T01:intron 50.0%
ATGTACGGAAAATGGGGCCA+AGG - Chr1:85280640-85280659 None:intergenic 50.0%
CACGTTGCGAAGACCACTTT+CGG - Chr1:85275013-85275032 None:intergenic 50.0%
CACTTCCGGTAGATAGAGTC+CGG - Chr1:85277836-85277855 None:intergenic 50.0%
CATTCCGGAGGAGCAAAATG+TGG + Chr1:85277900-85277919 MsG0180004988.01.T01:intron 50.0%
CCGCACACACATCGGAAATA+TGG - Chr1:85277014-85277033 None:intergenic 50.0%
CCTGGAACAAAGCTGTTGCA+AGG - Chr1:85281274-85281293 None:intergenic 50.0%
CGCGAAGCAAGTACATGATC+AGG + Chr1:85281437-85281456 MsG0180004988.01.T01:intron 50.0%
CTACGTTTCACTCTCTTGGC+CGG + Chr1:85280766-85280785 MsG0180004988.01.T01:intron 50.0%
CTCAATGTTACGTCCAGCCA+TGG + Chr1:85280046-85280065 MsG0180004988.01.T01:intron 50.0%
CTTCTCGGTAAACAGGTGCA+TGG - Chr1:85275103-85275122 None:intergenic 50.0%
CTTTCCATCAGATGTCCCAG+AGG - Chr1:85281534-85281553 None:intergenic 50.0%
GACTTTATGCCTCAGAGGGA+TGG + Chr1:85275726-85275745 MsG0180004988.01.T01:intron 50.0%
GATTGCTCCACAGGAACATG+TGG - Chr1:85281609-85281628 None:intergenic 50.0%
GCAGATACCGATGGCATATG+TGG + Chr1:85282729-85282748 MsG0180004988.01.T01:CDS 50.0%
GCATCAGCAAGATCTCCTTG+TGG - Chr1:85281179-85281198 None:intergenic 50.0%
GCATTTGCGAACTGAACGGA+AGG - Chr1:85275820-85275839 None:intergenic 50.0%
GGGCCTAAAGAGATATTGGG+GGG + Chr1:85278003-85278022 MsG0180004988.01.T01:intron 50.0%
GGGGCCTAAAGAGATATTGG+GGG + Chr1:85278002-85278021 MsG0180004988.01.T01:intron 50.0%
GGGGGCCTAAAGAGATATTG+GGG + Chr1:85278001-85278020 MsG0180004988.01.T01:intron 50.0%
GTCCCAGAGGTGAGAATTGT+AGG - Chr1:85281521-85281540 None:intergenic 50.0%
GTGCATGCTTCCTGCGAAAA+AGG - Chr1:85276816-85276835 None:intergenic 50.0%
GTGCTATCACAGTTCCCACA+AGG + Chr1:85281161-85281180 MsG0180004988.01.T01:CDS 50.0%
GTGGGTGTGTAACGACAGTT+TGG + Chr1:85281831-85281850 MsG0180004988.01.T01:intron 50.0%
TACCGATGGCATATGTGGTG+AGG + Chr1:85282734-85282753 MsG0180004988.01.T01:CDS 50.0%
TATTTCCGATGTGTGTGCGG+CGG + Chr1:85277014-85277033 MsG0180004988.01.T01:intron 50.0%
TCAATTTGTGCAGGCCAGGT+AGG + Chr1:85282790-85282809 MsG0180004988.01.T01:CDS 50.0%
TCATACACGACGTTAGACGG+GGG + Chr1:85279329-85279348 MsG0180004988.01.T01:intron 50.0%
TCCTTGGTTGAACTAAGGGC+GGG + Chr1:85282055-85282074 MsG0180004988.01.T01:intron 50.0%
TGATCGACGAATCTCACCGT+AGG - Chr1:85281243-85281262 None:intergenic 50.0%
TGGCCGGCCACAAAAATTTC+AGG + Chr1:85280782-85280801 MsG0180004988.01.T01:intron 50.0%
TGGTTGAGGACAGGTGATCT+TGG + Chr1:85282313-85282332 MsG0180004988.01.T01:CDS 50.0%
TTAAGCGCATAAGACCCGTG+CGG - Chr1:85279137-85279156 None:intergenic 50.0%
! AGAAGCGCACCAATCATGAC+AGG - Chr1:85275963-85275982 None:intergenic 50.0%
! AGGTGCTGCACCTTTGAGTA+AGG + Chr1:85282003-85282022 MsG0180004988.01.T01:intron 50.0%
! AGGTTTTCCCCCCCATTTTG+AGG - Chr1:85274786-85274805 None:intergenic 50.0%
! CTACCTAAGAAGGTTGGCTC+AGG + Chr1:85281983-85282002 MsG0180004988.01.T01:intron 50.0%
! GCAGTGTTGAGATCTGGCTT+TGG - Chr1:85281134-85281153 None:intergenic 50.0%
! GGGAAACTTTAGTGACGGGA+GGG + Chr1:85279357-85279376 MsG0180004988.01.T01:intron 50.0%
! GGTGGGTGAGCTACGTTTTT+CGG + Chr1:85282096-85282115 MsG0180004988.01.T01:intron 50.0%
! GGTTTTCCCCCCCATTTTGA+GGG - Chr1:85274785-85274804 None:intergenic 50.0%
! GTGGGTGAGCTACGTTTTTC+GGG + Chr1:85282097-85282116 MsG0180004988.01.T01:intron 50.0%
! TGCCGGATTTTATGTACCGG+AGG + Chr1:85277938-85277957 MsG0180004988.01.T01:intron 50.0%
! TTCAGAGGTTGGTTGAGGAC+AGG + Chr1:85282304-85282323 MsG0180004988.01.T01:intron 50.0%
!! CCTTGCAACAGCTTTGTTCC+AGG + Chr1:85281271-85281290 MsG0180004988.01.T01:CDS 50.0%
!! CGTTTCTGGAACAGAACTGG+AGG + Chr1:85275917-85275936 MsG0180004988.01.T01:CDS 50.0%
!! GGATTTGGGTTGCTGTGTGT+GGG + Chr1:85281813-85281832 MsG0180004988.01.T01:intron 50.0%
!! GTGTTGAGATCTGGCTTTGG+TGG - Chr1:85281131-85281150 None:intergenic 50.0%
!! GTTGAACTAAGGGCGGGTTA+TGG + Chr1:85282061-85282080 MsG0180004988.01.T01:intron 50.0%
!! TAGTATGAGAGGGTTGGCTG+TGG - Chr1:85281407-85281426 None:intergenic 50.0%
!! TGGATTTGGGTTGCTGTGTG+TGG + Chr1:85281812-85281831 MsG0180004988.01.T01:intron 50.0%
!!! GTGAGCTACGTTTTTCGGGT+CGG + Chr1:85282101-85282120 MsG0180004988.01.T01:intron 50.0%
AAGCCTTTGCCCTCCACTCA+AGG + Chr1:85282203-85282222 MsG0180004988.01.T01:intron 55.0%
AATAGGCGGAGGGGATCGTA+CGG - Chr1:85282633-85282652 None:intergenic 55.0%
ACCCGCCCTTAGTTCAACCA+AGG - Chr1:85282059-85282078 None:intergenic 55.0%
CTTCCTTGAGTGGAGGGCAA+AGG - Chr1:85282209-85282228 None:intergenic 55.0%
GCACCTGAGCCAACCTTCTT+AGG - Chr1:85281989-85282008 None:intergenic 55.0%
GCAGTGTCTGATTGCTCCAC+AGG - Chr1:85281618-85281637 None:intergenic 55.0%
GCCACCAGTGATCCACTCAT+TGG + Chr1:85281926-85281945 MsG0180004988.01.T01:intron 55.0%
GCCCTCACCACATATGCCAT+CGG - Chr1:85282739-85282758 None:intergenic 55.0%
GGAAAATGGGGCCAAGGTCT+TGG - Chr1:85280634-85280653 None:intergenic 55.0%
GGACCTGAGACCTCAACAGA+AGG + Chr1:85279930-85279949 MsG0180004988.01.T01:intron 55.0%
GTGCTCCGGACTCTATCTAC+CGG + Chr1:85277828-85277847 MsG0180004988.01.T01:intron 55.0%
TCAGGTAGCTCCTGCAGAAC+TGG + Chr1:85282560-85282579 MsG0180004988.01.T01:intron 55.0%
TGCAGGCTTCCCGAATCACT+AGG + Chr1:85276631-85276650 MsG0180004988.01.T01:intron 55.0%
! CGGGAAACTTTAGTGACGGG+AGG + Chr1:85279356-85279375 MsG0180004988.01.T01:intron 55.0%
! TTGTGACCGGAGGGAGTACA+TGG + Chr1:85278620-85278639 MsG0180004988.01.T01:intron 55.0%
!! CTCACCTCTGGGACATCTGA+TGG + Chr1:85281527-85281546 MsG0180004988.01.T01:CDS 55.0%
GATCACCGCCGCACACACAT+CGG - Chr1:85277022-85277041 None:intergenic 60.0%
GCAATGGCACGTGATGCGGA+AGG + Chr1:85276900-85276919 MsG0180004988.01.T01:intron 60.0%
GCATATGTGGTGAGGGCAGC+TGG + Chr1:85282742-85282761 MsG0180004988.01.T01:CDS 60.0%
TGGATCACTGGTGGCACTGC+TGG - Chr1:85281921-85281940 None:intergenic 60.0%
TGGCGCAATGGCACGTGATG+CGG + Chr1:85276896-85276915 MsG0180004988.01.T01:intron 60.0%
! CGACGTTAGACGGGGGTACA+CGG + Chr1:85279336-85279355 MsG0180004988.01.T01:intron 60.0%
! GACGTTAGACGGGGGTACAC+GGG + Chr1:85279337-85279356 MsG0180004988.01.T01:intron 60.0%
ATAAGACCCGTGCGGCGCAC+GGG - Chr1:85279129-85279148 None:intergenic 65.0%
CAGGCCAGGTAGGCCACTCT+TGG + Chr1:85282800-85282819 MsG0180004988.01.T01:CDS 65.0%
CATAAGACCCGTGCGGCGCA+CGG - Chr1:85279130-85279149 None:intergenic 65.0%
GGAGCCAAGAGTGGCCTACC+TGG - Chr1:85282807-85282826 None:intergenic 65.0%
! GACCCGTGCGGCGCACGGGT+CGG - Chr1:85279125-85279144 None:intergenic 80.0%
! TCGCCGACCCGTGCGCCGCA+CGG + Chr1:85279119-85279138 MsG0180004988.01.T01:intron 80.0%
! CGCCGACCCGTGCGCCGCAC+GGG + Chr1:85279120-85279139 MsG0180004988.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 85274519 85282842 85274519 ID=MsG0180004988.01;Name=MsG0180004988.01
Chr1 mRNA 85274519 85282842 85274519 ID=MsG0180004988.01.T01;Parent=MsG0180004988.01;Name=MsG0180004988.01.T01;_AED=0.37;_eAED=0.43;_QI=0|0|0|1|1|1|7|0|453
Chr1 exon 85274519 85274643 85274519 ID=MsG0180004988.01.T01:exon:9564;Parent=MsG0180004988.01.T01
Chr1 exon 85275007 85275138 85275007 ID=MsG0180004988.01.T01:exon:9565;Parent=MsG0180004988.01.T01
Chr1 exon 85275829 85275972 85275829 ID=MsG0180004988.01.T01:exon:9566;Parent=MsG0180004988.01.T01
Chr1 exon 85280998 85281391 85280998 ID=MsG0180004988.01.T01:exon:9567;Parent=MsG0180004988.01.T01
Chr1 exon 85281480 85281667 85281480 ID=MsG0180004988.01.T01:exon:9568;Parent=MsG0180004988.01.T01
Chr1 exon 85282309 85282408 85282309 ID=MsG0180004988.01.T01:exon:9569;Parent=MsG0180004988.01.T01
Chr1 exon 85282564 85282842 85282564 ID=MsG0180004988.01.T01:exon:9570;Parent=MsG0180004988.01.T01
Chr1 CDS 85274519 85274643 85274519 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Chr1 CDS 85275007 85275138 85275007 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Chr1 CDS 85275829 85275972 85275829 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Chr1 CDS 85280998 85281391 85280998 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Chr1 CDS 85281480 85281667 85281480 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Chr1 CDS 85282309 85282408 85282309 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Chr1 CDS 85282564 85282842 85282564 ID=MsG0180004988.01.T01:cds;Parent=MsG0180004988.01.T01
Gene Sequence

>MsG0180004988.01.T01

ATGTTACTTTTCAATCAATTCAAGAGAAAGGAGAAATCTTTGAAAGTAGAGTTTGAAGTGGAAAATTATGAAAAACAAATTCACACTTTCAATCAAAAATACTTCTTGATGATCTACACACAAAGAAGCCGAAAGTGGTCTTCGCAACGTGACCGTGAACTCTTATCTGCAAAACTAGAGATTGAAAATGCAAATGTCTTATCGAACTCTTCAGGACTCCATGCACCTGTTTACCGAGAAGTTTCCAAATTTTCAAGTTCGCAAATGCTAAGGGCCAATCTTTCTGACAATAAGAAGATGGAGCAGTACCTTGACAAATATGTGAATATAATTGCTGGAAAATATCGTTTCTGGAACAGAACTGGAGGAGCAGACCATTTTCTCGTTGCCTGTCATGATTGGAGAGGGAGTTGGTCATCCGTTGAAGAAGAATCTGGCGAATCTCTGCCTCCATTTGATAACAGAGTGGCTACAATCCAAGAAACAGGAATTTACCATTCTCTTGTTAAGCTTGAAACCAAACATGAAATCCCACCAAAGCCAGATCTCAACACTGCAACTCTTGTGCTATCACAGTTCCCACAAGGAGATCTTGCTGATGCAAGAATTGCATTCATTGACTTAAATACTAATCATAGTGTAACCTACGGTGAGATTCGTCGATCAGTTTACTCCCTTGCAACAGCTTTGTTCCAGGACTTGAGATTGAAAAGGCGACGTCGTGTTTTTATTGTCCTCCAAACTCATCTTGTGAATCTTGTACTCAACCATATGCTTAGCTGTGTTACTCAGTTGCACCAGAAGAGTTACACAAATGGTCCCAAACTGGAGTTCCTACAATTCTCACCTCTGGGACATCTGATGGAAAGTTTTTATCAGTTTGAAGAGTTAATAGAAGGCTGCTATGATTCACAAGAGTTGCCACATGTTCCTGTGGAGCAATCAGACACTGCCGCTATACTTTACTCTTCAGGACTACTGGAAGGTTGGTTGAGGACAGGTGATCTTGGTTATATCGATGAGAATGGAATTGTCTACATAGTTGAACGAATAAAGGAGCTAATCAAGCACAAAGGGTATCAGGTAGCTCCTGCAGAACTGGAATCTGTGCTGCTAAGTCATCCCCTTATTGTTGATGCAGCAGTTATTCCGTACGATCCCCTCCGCCTATTTTCACTCTTTTTTCATTCTCTCTGTGACTTTCTTATGTGGACAAAAAATGTTGCAGGGTTGAAGATGAAGAAACTGGCAGATACCGATGGCATATGTGGTGAGGGCAGCTGGTTCTCACTACAGAAGATCAAGTCATTCAATTTGTGCAGGCCAGGTAGGCCACTCTTGGCTCCTGATTTCATGCAGTAA

Protein sequence

>MsG0180004988.01.T01

MLLFNQFKRKEKSLKVEFEVENYEKQIHTFNQKYFLMIYTQRSRKWSSQRDRELLSAKLEIENANVLSNSSGLHAPVYREVSKFSSSQMLRANLSDNKKMEQYLDKYVNIIAGKYRFWNRTGGADHFLVACHDWRGSWSSVEEESGESLPPFDNRVATIQETGIYHSLVKLETKHEIPPKPDLNTATLVLSQFPQGDLADARIAFIDLNTNHSVTYGEIRRSVYSLATALFQDLRLKRRRRVFIVLQTHLVNLVLNHMLSCVTQLHQKSYTNGPKLEFLQFSPLGHLMESFYQFEELIEGCYDSQELPHVPVEQSDTAAILYSSGLLEGWLRTGDLGYIDENGIVYIVERIKELIKHKGYQVAPAELESVLLSHPLIVDAAVIPYDPLRLFSLFFHSLCDFLMWTKNVAGLKMKKLADTDGICGEGSWFSLQKIKSFNLCRPGRPLLAPDFMQ*