AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005730.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005730.01.T01 MTR_1g105930 100.000 38 0 0 282 319 56 93 5.84e-18 84.0
MsG0180005730.01.T01 MTR_1g105930 65.909 88 23 3 157 244 1 81 1.13e-14 74.3
MsG0180005730.01.T01 MTR_5g005370 78.947 38 8 0 282 319 2 39 2.74e-13 69.7
MsG0180005730.01.T01 MTR_5g005370 78.947 38 8 0 282 319 9 46 2.85e-13 69.7
MsG0180005730.01.T01 MTR_5g005370 78.947 38 8 0 282 319 37 74 2.89e-13 70.1
MsG0180005730.01.T01 MTR_5g005370 78.947 38 8 0 282 319 37 74 3.44e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005730.01.T01 AT4G33770 64.151 53 11 1 267 319 6 50 5.12e-14 72.0
MsG0180005730.01.T01 AT4G33770 81.081 37 7 0 283 319 107 143 9.83e-14 72.0
MsG0180005730.01.T01 AT4G08170 71.429 42 12 0 282 323 66 107 2.88e-12 67.4

Find 54 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGATTAGATTTATTTAGTT+TGG 0.227085 1:-95389256 MsG0180005730.01.T01:CDS
ATCAAATCGCGTTGGAAAAT+CGG 0.278088 1:-95389456 MsG0180005730.01.T01:CDS
CTTGCAAGAGAAATGAAATT+TGG 0.289856 1:+95382114 None:intergenic
TATCTCTCTATGTGTCTTGT+TGG 0.339115 1:-95383360 MsG0180005730.01.T01:CDS
GATGAGTTTCGAACTGAATC+TGG 0.354988 1:-95389403 MsG0180005730.01.T01:CDS
AGATTAGATTTATTTAGTTT+GGG 0.362125 1:-95389255 MsG0180005730.01.T01:CDS
TTAATTATGCGTTGTCAGTT+GGG 0.373994 1:-95383810 MsG0180005730.01.T01:CDS
ATTTGACATTGTCTTGCATA+AGG 0.382180 1:-95380762 MsG0180005730.01.T01:intron
CTTAATTATGCGTTGTCAGT+TGG 0.383246 1:-95383811 MsG0180005730.01.T01:CDS
CGGAGATGAGGTCAGCACTA+TGG 0.419865 1:-95389341 MsG0180005730.01.T01:CDS
TACCAAGAAACAAACCAGTT+TGG 0.426936 1:+95381685 None:intergenic
GTCGGTCACGAATGGAGCTC+GGG 0.430190 1:+95381732 None:intergenic
TTCTTGTAAACATACCAAAC+TGG 0.431549 1:-95381699 MsG0180005730.01.T01:intron
TTGGTACAATGTTTGTAAAA+CGG 0.440510 1:-95383341 MsG0180005730.01.T01:CDS
AGGTAAAGGCAATGACCATT+TGG 0.447715 1:-95383782 MsG0180005730.01.T01:CDS
GAAAAGTGAAATTGAGAAAG+AGG 0.448780 1:-95389434 MsG0180005730.01.T01:CDS
TGGGTCAGAAAATTGTTGTT+GGG 0.450840 1:-95382176 MsG0180005730.01.T01:CDS
TTGGGTCAGAAAATTGTTGT+TGG 0.460458 1:-95382177 MsG0180005730.01.T01:CDS
ATTTGTTCTTTCCAGTTGTT+AGG 0.472300 1:-95380545 MsG0180005730.01.T01:intron
CAGTAAATGTCATGTCCAAA+TGG 0.473560 1:+95383767 None:intergenic
CAAATTTCATTTCTCTTGCA+AGG 0.481455 1:-95382113 MsG0180005730.01.T01:CDS
CGAACTGAATCTGGCGGCGT+CGG 0.492518 1:-95389394 MsG0180005730.01.T01:CDS
TTATGCAAGACAATGTCAAA+TGG 0.500174 1:+95380764 None:intergenic
AAGTTGCGTGTTCTGACAAT+GGG 0.504150 1:-95389309 MsG0180005730.01.T01:CDS
TCTATGAAGACGGTTAGATC+TGG 0.504422 1:-95383394 MsG0180005730.01.T01:CDS
TCCAGTTGTTAGGCGAGGAA+TGG 0.516509 1:-95380535 MsG0180005730.01.T01:intron
ATTCAGTTCGAAACTCATCC+AGG 0.522643 1:+95389407 None:intergenic
TAATTATGCGTTGTCAGTTG+GGG 0.523875 1:-95383809 MsG0180005730.01.T01:CDS
ACTGACAACGCATAATTAAG+TGG 0.528911 1:+95383814 None:intergenic
TGTCGGTCACGAATGGAGCT+CGG 0.537570 1:+95381731 None:intergenic
GTTTGTAAAACGGAGTTCGA+TGG 0.541154 1:-95383331 MsG0180005730.01.T01:CDS
AATTGAGAAAGAGGAGAACC+TGG 0.546028 1:-95389425 MsG0180005730.01.T01:CDS
TGTTGTTAATCAAATCGCGT+TGG 0.546917 1:-95389464 MsG0180005730.01.T01:CDS
CAAGTTGCGTGTTCTGACAA+TGG 0.547672 1:-95389310 MsG0180005730.01.T01:CDS
TACAAGAAATCTAAAAGTGT+CGG 0.557279 1:+95381714 None:intergenic
CTAAAAGTGTCGGTCACGAA+TGG 0.558524 1:+95381724 None:intergenic
TTCTTTCCAGTTGTTAGGCG+AGG 0.558531 1:-95380540 MsG0180005730.01.T01:intron
TATGTGTAATGCAGGAGCAA+GGG 0.560921 1:-95380836 MsG0180005730.01.T01:intron
TTATGTGTAATGCAGGAGCA+AGG 0.565876 1:-95380837 MsG0180005730.01.T01:intron
TACAAGTACAATGTGAAAGT+AGG 0.575523 1:+95380473 None:intergenic
TGAAAGTAGGCTGAAGTGAG+TGG 0.580145 1:+95380486 None:intergenic
GTTTGCAGCATCTATGAAGA+CGG 0.602980 1:-95383404 MsG0180005730.01.T01:CDS
AACAAGCCACTGTCAGAACA+AGG 0.605835 1:-95380788 MsG0180005730.01.T01:CDS
CGTCAAAACCAAAATCTGAC+CGG 0.607205 1:+95389365 None:intergenic
ACGGAGTTCGATGGAAATCA+CGG 0.610047 1:-95383322 MsG0180005730.01.T01:CDS
ATGTGTAATGCAGGAGCAAG+GGG 0.610801 1:-95380835 MsG0180005730.01.T01:intron
AATTATGCGTTGTCAGTTGG+GGG 0.627727 1:-95383808 MsG0180005730.01.T01:CDS
AGAAGTGATGGCGAAATCTG+AGG 0.629932 1:-95382217 MsG0180005730.01.T01:CDS
AATGGACCTTGTTCTGACAG+TGG 0.636759 1:+95380782 None:intergenic
CTGACAACGCATAATTAAGT+GGG 0.647885 1:+95383815 None:intergenic
TCGGTCACGAATGGAGCTCG+GGG 0.652364 1:+95381733 None:intergenic
GAGTTTCGAACTGAATCTGG+CGG 0.687694 1:-95389400 MsG0180005730.01.T01:CDS
GGAATGGCGAGAGATCATTG+AGG 0.697509 1:-95380519 MsG0180005730.01.T01:CDS
TTGAGCTACAGACATTACAT+CGG 0.700555 1:+95381765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATGCAATAAAAAAAA+TGG + Chr1:95382561-95382580 None:intergenic 10.0%
!! AGTATTATAAAAATATTGAA+AGG + Chr1:95384822-95384841 None:intergenic 10.0%
!! ATATATGCAATAAAAAAAAT+GGG + Chr1:95382560-95382579 None:intergenic 10.0%
!! ATTGTATACAATATATATAA+GGG - Chr1:95381714-95381733 MsG0180005730.01.T01:CDS 10.0%
!! TTCAAAAAAAAAATGATATA+AGG - Chr1:95381388-95381407 MsG0180005730.01.T01:intron 10.0%
!!! CATATTTTATACTTTAATAA+TGG - Chr1:95385235-95385254 MsG0180005730.01.T01:intron 10.0%
!!! CTGTTTTTTTTTTTTTAAAA+AGG - Chr1:95389263-95389282 MsG0180005730.01.T01:CDS 10.0%
!!! TATTTAGTTTTTTAACAAAA+GGG - Chr1:95380782-95380801 MsG0180005730.01.T01:CDS 10.0%
!!! TATTTAGTTTTTTTACAAAA+GGG - Chr1:95380730-95380749 MsG0180005730.01.T01:intron 10.0%
!!! TTATTTAGTTTTTTAACAAA+AGG - Chr1:95380781-95380800 MsG0180005730.01.T01:CDS 10.0%
!!! TTATTTAGTTTTTTTACAAA+AGG - Chr1:95380729-95380748 MsG0180005730.01.T01:intron 10.0%
!!! TTTTTTAATTGATTGAATAA+CGG + Chr1:95386985-95387004 None:intergenic 10.0%
!! AAACAAATAAAATACAGAAA+AGG - Chr1:95387297-95387316 MsG0180005730.01.T01:intron 15.0%
!! AAATATTTAACTGTTGAAAT+TGG - Chr1:95381787-95381806 MsG0180005730.01.T01:CDS 15.0%
!! AAATGTCAATTTAAATTCTT+TGG - Chr1:95386084-95386103 MsG0180005730.01.T01:intron 15.0%
!! AAATTACATTTAATCATAAC+CGG - Chr1:95381469-95381488 MsG0180005730.01.T01:intron 15.0%
!! AACAAATAAAATACAGAAAA+GGG - Chr1:95387298-95387317 MsG0180005730.01.T01:intron 15.0%
!! AATAATAAAGAATAAAGAGA+AGG - Chr1:95381089-95381108 MsG0180005730.01.T01:intron 15.0%
!! AGAAATATTTATTGCTTAAA+AGG - Chr1:95387067-95387086 MsG0180005730.01.T01:intron 15.0%
!! ATATTATATATAAGATACGT+TGG + Chr1:95381277-95381296 None:intergenic 15.0%
!! CATTGTATACAATATATATA+AGG - Chr1:95381713-95381732 MsG0180005730.01.T01:CDS 15.0%
!! GTAAAAAAATAAAGTAATCA+AGG - Chr1:95380809-95380828 MsG0180005730.01.T01:CDS 15.0%
!! GTATATATTGAGATAATAAA+AGG - Chr1:95386410-95386429 MsG0180005730.01.T01:intron 15.0%
!! TAAAATACTAAATGAAAATG+AGG + Chr1:95381147-95381166 None:intergenic 15.0%
!! TAGATTAGATTTATTTAGTT+TGG - Chr1:95380681-95380700 MsG0180005730.01.T01:intron 15.0%
!! TATAAAAATATTGAAAGGAT+CGG + Chr1:95384817-95384836 None:intergenic 15.0%
!! TATTTGTATAACTCTTATAA+CGG - Chr1:95382298-95382317 MsG0180005730.01.T01:intron 15.0%
!! TTCATAATAAAGATAAATTG+CGG + Chr1:95384415-95384434 None:intergenic 15.0%
!!! AACTTAAGCTATATTTTTAT+CGG - Chr1:95388962-95388981 MsG0180005730.01.T01:intron 15.0%
!!! AGATTAGATTTATTTAGTTT+GGG - Chr1:95380682-95380701 MsG0180005730.01.T01:intron 15.0%
!!! ATACATTTATACTTTTTACT+AGG + Chr1:95382885-95382904 None:intergenic 15.0%
!!! ATAGTTTTTCTTGTTATAAT+AGG - Chr1:95387006-95387025 MsG0180005730.01.T01:intron 15.0%
!!! ATTTAGTTTTTTAACAAAAG+GGG - Chr1:95380783-95380802 MsG0180005730.01.T01:CDS 15.0%
!!! ATTTAGTTTTTTTACAAAAG+GGG - Chr1:95380731-95380750 MsG0180005730.01.T01:intron 15.0%
!!! ATTTTTTTTTTTTTTAGTGG+TGG - Chr1:95387928-95387947 MsG0180005730.01.T01:intron 15.0%
!!! CATTTTCATTTAGTATTTTA+GGG - Chr1:95381147-95381166 MsG0180005730.01.T01:intron 15.0%
!!! GAGAAAAAATGATATTTTTT+AGG + Chr1:95383883-95383902 None:intergenic 15.0%
!!! GTGATTTTTTTTTTTTTTAG+TGG - Chr1:95387925-95387944 MsG0180005730.01.T01:intron 15.0%
!!! TCATTTTCATTTAGTATTTT+AGG - Chr1:95381146-95381165 MsG0180005730.01.T01:intron 15.0%
!!! TCTTTTTAAAACATATTCAT+GGG - Chr1:95381315-95381334 MsG0180005730.01.T01:intron 15.0%
!!! TTCTTTTTAAAACATATTCA+TGG - Chr1:95381314-95381333 MsG0180005730.01.T01:intron 15.0%
!!! TTTTAAAAAGGTTTCATTTA+TGG - Chr1:95389275-95389294 MsG0180005730.01.T01:CDS 15.0%
!!! TTTTGACAATTGAATAAAAA+TGG - Chr1:95386047-95386066 MsG0180005730.01.T01:intron 15.0%
!!! TTTTTAATTGATTGAATAAC+GGG + Chr1:95386984-95387003 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTAGTGGT+GGG - Chr1:95387929-95387948 MsG0180005730.01.T01:intron 15.0%
!! AAAACCATAAAAATACAACA+GGG - Chr1:95381219-95381238 MsG0180005730.01.T01:intron 20.0%
!! AAAATAAACCCTTAATCAAT+TGG + Chr1:95384334-95384353 None:intergenic 20.0%
!! AAAGTATAAAATATGTCCTT+TGG + Chr1:95385230-95385249 None:intergenic 20.0%
!! AATAAATAAACCAAAGAACA+AGG - Chr1:95385328-95385347 MsG0180005730.01.T01:intron 20.0%
!! AATATTCTACCAATTGATTA+AGG - Chr1:95384322-95384341 MsG0180005730.01.T01:intron 20.0%
!! AATTACCTTGAAAATAATTG+TGG - Chr1:95381561-95381580 MsG0180005730.01.T01:intron 20.0%
!! AATTCTCCATTATTATATAG+TGG - Chr1:95383164-95383183 MsG0180005730.01.T01:intron 20.0%
!! ACAAATTGACATTAGAATAT+AGG + Chr1:95385918-95385937 None:intergenic 20.0%
!! AGAGAATCTTAAGAAAATAA+AGG - Chr1:95382058-95382077 MsG0180005730.01.T01:intron 20.0%
!! ATAATAATAATTCAGAGAAG+AGG - Chr1:95385113-95385132 MsG0180005730.01.T01:intron 20.0%
!! ATATAATGAACAATATCAGT+TGG - Chr1:95384098-95384117 MsG0180005730.01.T01:intron 20.0%
!! ATATTCTACCAATTGATTAA+GGG - Chr1:95384323-95384342 MsG0180005730.01.T01:intron 20.0%
!! ATGATCAAAAAGAAAATCAT+TGG + Chr1:95387868-95387887 None:intergenic 20.0%
!! CCAAAAAAAAGAAAAAAGAA+TGG - Chr1:95382448-95382467 MsG0180005730.01.T01:intron 20.0%
!! CTTGAAAATAGATAGAAATT+AGG - Chr1:95382235-95382254 MsG0180005730.01.T01:CDS 20.0%
!! GTTATAAGAGTTATACAAAT+AGG + Chr1:95382299-95382318 None:intergenic 20.0%
!! TAAAACCATAAAAATACAAC+AGG - Chr1:95381218-95381237 MsG0180005730.01.T01:intron 20.0%
!! TAAATGTCAAGTTTAAAGAA+TGG - Chr1:95382414-95382433 MsG0180005730.01.T01:intron 20.0%
!! TATACAATATATATAAGGGT+CGG - Chr1:95381718-95381737 MsG0180005730.01.T01:CDS 20.0%
!! TCATAATAAAGATAAATTGC+GGG + Chr1:95384414-95384433 None:intergenic 20.0%
!! TTTCTTCCTATAATAAGTAT+TGG + Chr1:95386907-95386926 None:intergenic 20.0%
!!! AAACTCTGTTTTTCTTTTTT+TGG - Chr1:95388037-95388056 MsG0180005730.01.T01:intron 20.0%
!!! AAATTAATCCTTGAGATTTT+TGG + Chr1:95382390-95382409 None:intergenic 20.0%
!!! AAGTTTTAAGTTTATCTTTG+AGG - Chr1:95383282-95383301 MsG0180005730.01.T01:intron 20.0%
!!! ATAACTATCCTTCTTTTTTT+AGG - Chr1:95385878-95385897 MsG0180005730.01.T01:intron 20.0%
!!! ATATGATACTAGTTTGTTTA+AGG + Chr1:95384947-95384966 None:intergenic 20.0%
!!! ATTAGTTTCCTAAAAAAAGA+AGG + Chr1:95385889-95385908 None:intergenic 20.0%
!!! ATTTTCAAGGTAATTAAAAC+CGG + Chr1:95381556-95381575 None:intergenic 20.0%
!!! CCATTCTTTTTTCTTTTTTT+TGG + Chr1:95382451-95382470 None:intergenic 20.0%
!!! CTTGATTTTTGTAGTAAAAA+AGG + Chr1:95383562-95383581 None:intergenic 20.0%
!!! TATTTTATTTGTAAACACGT+AGG + Chr1:95382652-95382671 None:intergenic 20.0%
!!! TTAATCTTTTTATTGAAGTG+AGG + Chr1:95381760-95381779 None:intergenic 20.0%
!!! TTCAAGTTCTTTGATAAAAA+AGG + Chr1:95381071-95381090 None:intergenic 20.0%
!!! TTTCTTGTTATAATAGGAAT+TGG - Chr1:95387012-95387031 MsG0180005730.01.T01:intron 20.0%
!!! TTTTAGAACACTTGTAATTT+TGG - Chr1:95382683-95382702 MsG0180005730.01.T01:intron 20.0%
!!! TTTTTTTTTTTTTAGTGGTG+GGG - Chr1:95387930-95387949 MsG0180005730.01.T01:intron 20.0%
! AAAACTTACATGACTTTACA+TGG - Chr1:95388529-95388548 MsG0180005730.01.T01:intron 25.0%
! AAAAGAAAAAAGAAGAAGGA+AGG - Chr1:95383112-95383131 MsG0180005730.01.T01:intron 25.0%
! AAAATAAAGGAGGTAACTTT+AGG - Chr1:95382071-95382090 MsG0180005730.01.T01:CDS 25.0%
! AAAATAGAGGAAGAAGTTAA+TGG - Chr1:95383936-95383955 MsG0180005730.01.T01:intron 25.0%
! AAAGATTTGATCTTTGAATC+AGG - Chr1:95387644-95387663 MsG0180005730.01.T01:intron 25.0%
! AAGAAAAACAGAGTTTACAA+TGG + Chr1:95388033-95388052 None:intergenic 25.0%
! AAGAAAATAATGAAGTTGCA+TGG - Chr1:95384637-95384656 MsG0180005730.01.T01:intron 25.0%
! AAGATTTGATCTTTGAATCA+GGG - Chr1:95387645-95387664 MsG0180005730.01.T01:intron 25.0%
! AATGAATTATAGCTGAGAAT+CGG + Chr1:95385068-95385087 None:intergenic 25.0%
! AATTATTAACTATTCAGAGC+AGG - Chr1:95385136-95385155 MsG0180005730.01.T01:intron 25.0%
! AGAAAGTTACCATCAATATT+GGG - Chr1:95383711-95383730 MsG0180005730.01.T01:intron 25.0%
! AGGTGTATATAAATAGAGTA+TGG + Chr1:95384009-95384028 None:intergenic 25.0%
! AGTTCTTTCTCATAAATACA+TGG + Chr1:95384387-95384406 None:intergenic 25.0%
! ATCACTATCATAGTTATAAG+TGG + Chr1:95386245-95386264 None:intergenic 25.0%
! ATCCTTCCAATACTTATTAT+AGG - Chr1:95386898-95386917 MsG0180005730.01.T01:intron 25.0%
! ATTATGGAAATTGAGAATGA+TGG + Chr1:95387567-95387586 None:intergenic 25.0%
! ATTCTAATGTCAATTTGTGA+TGG - Chr1:95385920-95385939 MsG0180005730.01.T01:intron 25.0%
! ATTGTTCATAAGAAAGATAC+CGG - Chr1:95388380-95388399 MsG0180005730.01.T01:intron 25.0%
! CAAACATATATCCAAATCAT+TGG - Chr1:95384175-95384194 MsG0180005730.01.T01:intron 25.0%
! CAAATCAATATTGTCAACTA+TGG + Chr1:95388828-95388847 None:intergenic 25.0%
! CATATAATTTCTTCCGTATT+TGG + Chr1:95386293-95386312 None:intergenic 25.0%
! CTAAAAATTATGTGTAATGC+AGG - Chr1:95389093-95389112 MsG0180005730.01.T01:intron 25.0%
! GAAATGAAATTTATCAATCG+CGG + Chr1:95387595-95387614 None:intergenic 25.0%
! GAAGAAAAGAAAAAAGAAGA+AGG - Chr1:95383108-95383127 MsG0180005730.01.T01:intron 25.0%
! GAATCATGTTAATTGGAATA+TGG + Chr1:95384518-95384537 None:intergenic 25.0%
! GAATCTTAAGAAAATAAAGG+AGG - Chr1:95382061-95382080 MsG0180005730.01.T01:intron 25.0%
! GTAATCAAGGTAATAAAAAC+CGG - Chr1:95380822-95380841 MsG0180005730.01.T01:CDS 25.0%
! GTGGTCCTTATAAAAAAATT+GGG - Chr1:95381580-95381599 MsG0180005730.01.T01:intron 25.0%
! GTTCTTTCTCATAAATACAT+GGG + Chr1:95384386-95384405 None:intergenic 25.0%
! GTTGGCATATGAATTAAAAT+GGG - Chr1:95386021-95386040 MsG0180005730.01.T01:intron 25.0%
! TAGAAAGTTACCATCAATAT+TGG - Chr1:95383710-95383729 MsG0180005730.01.T01:intron 25.0%
! TAGCACACATATTTAGTTAA+GGG - Chr1:95385795-95385814 MsG0180005730.01.T01:intron 25.0%
! TATAGAAAAGAAGAGGAATT+AGG + Chr1:95387484-95387503 None:intergenic 25.0%
! TATTCTGTTGAAGAAGTTAA+TGG - Chr1:95383977-95383996 MsG0180005730.01.T01:intron 25.0%
! TCAATAATGCAGTAATATTG+TGG + Chr1:95386489-95386508 None:intergenic 25.0%
! TCATTCTCAATTTCCATAAT+CGG - Chr1:95387567-95387586 MsG0180005730.01.T01:intron 25.0%
! TGAGTTCCACTATATAATAA+TGG + Chr1:95383173-95383192 None:intergenic 25.0%
! TGGTCCTTATAAAAAAATTG+GGG - Chr1:95381581-95381600 MsG0180005730.01.T01:intron 25.0%
! TGTCACAAAAATATGTATCA+AGG - Chr1:95385032-95385051 MsG0180005730.01.T01:intron 25.0%
! TGTGGTCCTTATAAAAAAAT+TGG - Chr1:95381579-95381598 MsG0180005730.01.T01:intron 25.0%
! TGTGTGTGTGTAATTTATAA+TGG + Chr1:95387510-95387529 None:intergenic 25.0%
! TGTTCTCAAATATGTATTTG+TGG + Chr1:95386464-95386483 None:intergenic 25.0%
! TGTTGGCATATGAATTAAAA+TGG - Chr1:95386020-95386039 MsG0180005730.01.T01:intron 25.0%
! TTAGCACACATATTTAGTTA+AGG - Chr1:95385794-95385813 MsG0180005730.01.T01:intron 25.0%
! TTATGGAAATTGAGAATGAT+GGG + Chr1:95387566-95387585 None:intergenic 25.0%
! TTCTAATGTCAATTTGTGAT+GGG - Chr1:95385921-95385940 MsG0180005730.01.T01:intron 25.0%
! TTGGTACAATGTTTGTAAAA+CGG - Chr1:95386596-95386615 MsG0180005730.01.T01:intron 25.0%
!! AAATATGTGTGCAGATTTTA+TGG + Chr1:95383378-95383397 None:intergenic 25.0%
!! ATGAATCGCTAAACAATTTT+TGG + Chr1:95385651-95385670 None:intergenic 25.0%
!! ATTTGTTAACACCAATGATT+TGG + Chr1:95384189-95384208 None:intergenic 25.0%
!! CAATTACAAATTTTGTTGCA+GGG + Chr1:95384295-95384314 None:intergenic 25.0%
!! CATAGTTGACAATATTGATT+TGG - Chr1:95388826-95388845 MsG0180005730.01.T01:intron 25.0%
!! CTGCATTACACATAATTTTT+AGG + Chr1:95389095-95389114 None:intergenic 25.0%
!! GTCATTATATACATTTTGAG+AGG - Chr1:95384763-95384782 MsG0180005730.01.T01:intron 25.0%
!! TACAAGAAATCTAAAAGTGT+CGG + Chr1:95388226-95388245 None:intergenic 25.0%
!! TATAATTTGTCTTTGTGAGA+TGG - Chr1:95388423-95388442 MsG0180005730.01.T01:intron 25.0%
!! TGATTTGGATATATGTTTGA+AGG + Chr1:95384174-95384193 None:intergenic 25.0%
!! TGGTAATGAAAATACAACAT+TGG + Chr1:95383420-95383439 None:intergenic 25.0%
!! TTCCTTGTAATTTTAAATCC+CGG + Chr1:95388402-95388421 None:intergenic 25.0%
!!! AAATCATTGGTGTTAACAAA+TGG - Chr1:95384188-95384207 MsG0180005730.01.T01:intron 25.0%
!!! AATATTGATTTGGATAGTCA+AGG - Chr1:95388836-95388855 MsG0180005730.01.T01:intron 25.0%
!!! AATCATTGGTGTTAACAAAT+GGG - Chr1:95384189-95384208 MsG0180005730.01.T01:intron 25.0%
!!! AATTGAAGGATGCTTTTTTT+AGG - Chr1:95383199-95383218 MsG0180005730.01.T01:intron 25.0%
!!! AATTTAGCACATTTTTTGTC+TGG - Chr1:95385552-95385571 MsG0180005730.01.T01:intron 25.0%
!!! ATATTTTTTAGGATCAACAC+TGG + Chr1:95383872-95383891 None:intergenic 25.0%
!!! ATGGTTTTATAGAAAAGAAG+AGG + Chr1:95387491-95387510 None:intergenic 25.0%
!!! ATTTTAGGGTTAGGATAAAT+GGG - Chr1:95381161-95381180 MsG0180005730.01.T01:intron 25.0%
!!! ATTTTTATCGGTTCAATGTT+TGG - Chr1:95388974-95388993 MsG0180005730.01.T01:intron 25.0%
!!! CTTTTGTTGTTACTTTTTGT+CGG - Chr1:95388062-95388081 MsG0180005730.01.T01:intron 25.0%
!!! CTTTTTTTTGTTTTTCGCTT+AGG - Chr1:95382191-95382210 MsG0180005730.01.T01:CDS 25.0%
!!! TAAAATTTTAGCCTACATAC+AGG + Chr1:95382344-95382363 None:intergenic 25.0%
!!! TAATTTTTTACGAGAATCAG+AGG - Chr1:95388446-95388465 MsG0180005730.01.T01:intron 25.0%
!!! TATTTAGTTTGGGAGTTTTA+GGG - Chr1:95380692-95380711 MsG0180005730.01.T01:intron 25.0%
!!! TATTTTAGGGTTAGGATAAA+TGG - Chr1:95381160-95381179 MsG0180005730.01.T01:intron 25.0%
!!! TCATTTAGTATTTTAGGGTT+AGG - Chr1:95381152-95381171 MsG0180005730.01.T01:intron 25.0%
!!! TTATTTAGTTTGGGAGTTTT+AGG - Chr1:95380691-95380710 MsG0180005730.01.T01:intron 25.0%
!!! TTCCTATAATAAGTATTGGA+AGG + Chr1:95386903-95386922 None:intergenic 25.0%
!!! TTGTCCCCAATTTTTTTATA+AGG + Chr1:95381588-95381607 None:intergenic 25.0%
!!! TTTGGTTCACACTTTTTTTT+CGG - Chr1:95381873-95381892 MsG0180005730.01.T01:intron 25.0%
!!! TTTTGAGAGGATGTTTTAAA+AGG - Chr1:95384776-95384795 MsG0180005730.01.T01:intron 25.0%
AAAATGCTAGCTACTTACAA+AGG + Chr1:95384725-95384744 None:intergenic 30.0%
AAAGAAAAAAGGAAGGAGAA+GGG - Chr1:95383058-95383077 MsG0180005730.01.T01:intron 30.0%
AAATTATTAACACTCAGCAG+TGG - Chr1:95388915-95388934 MsG0180005730.01.T01:intron 30.0%
AACACGTAGGAAATAAAAAC+AGG + Chr1:95382639-95382658 None:intergenic 30.0%
AACATTATTAGCTAGTACCT+CGG + Chr1:95385624-95385643 None:intergenic 30.0%
AATGAGGAAAGAAAAAAGGA+AGG - Chr1:95383051-95383070 MsG0180005730.01.T01:intron 30.0%
ACACGTAGGAAATAAAAACA+GGG + Chr1:95382638-95382657 None:intergenic 30.0%
AGATTTGATCTTTGAATCAG+GGG - Chr1:95387646-95387665 MsG0180005730.01.T01:intron 30.0%
ATATATGTTTGAAGGATGTG+TGG + Chr1:95384166-95384185 None:intergenic 30.0%
ATGAATTATAGCTGAGAATC+GGG + Chr1:95385067-95385086 None:intergenic 30.0%
ATGATGCAAATATCTGTAGT+GGG - Chr1:95386348-95386367 MsG0180005730.01.T01:intron 30.0%
ATTATATGTATCTGCACATG+AGG - Chr1:95386305-95386324 MsG0180005730.01.T01:intron 30.0%
ATTGTTCACTATCTCAATCT+TGG + Chr1:95383801-95383820 None:intergenic 30.0%
ATTGTTGTGAGTGATGAAAT+TGG + Chr1:95387538-95387557 None:intergenic 30.0%
ATTTGACATTGTCTTGCATA+AGG - Chr1:95389175-95389194 MsG0180005730.01.T01:intron 30.0%
ATTTGTTCTTTCCAGTTGTT+AGG - Chr1:95389392-95389411 MsG0180005730.01.T01:CDS 30.0%
CAAAATTTATGCTCAACCTT+TGG - Chr1:95388319-95388338 MsG0180005730.01.T01:intron 30.0%
CAAATTTCATTTCTCTTGCA+AGG - Chr1:95387824-95387843 MsG0180005730.01.T01:intron 30.0%
CAACAAATGTATTGTGAATG+AGG - Chr1:95383035-95383054 MsG0180005730.01.T01:intron 30.0%
CATTTGACCTATAAAAAGCA+GGG - Chr1:95382478-95382497 MsG0180005730.01.T01:intron 30.0%
CCAAATATGCACATACAATT+TGG + Chr1:95385722-95385741 None:intergenic 30.0%
CCAAATTGTATGTGCATATT+TGG - Chr1:95385719-95385738 MsG0180005730.01.T01:intron 30.0%
CCTGGAAATAAACCAAAAAA+CGG + Chr1:95380976-95380995 None:intergenic 30.0%
CTTGCAAGAGAAATGAAATT+TGG + Chr1:95387826-95387845 None:intergenic 30.0%
GAAAAGTGAAATTGAGAAAG+AGG - Chr1:95380503-95380522 MsG0180005730.01.T01:CDS 30.0%
GAACTTGGAATCATGTTAAT+TGG + Chr1:95384525-95384544 None:intergenic 30.0%
GATACCGATCTTGATTTATT+TGG - Chr1:95386219-95386238 MsG0180005730.01.T01:intron 30.0%
GGAACTCAAAAATGAATTGA+AGG - Chr1:95383185-95383204 MsG0180005730.01.T01:intron 30.0%
TACAAAAATCAAGACCTATC+TGG - Chr1:95383569-95383588 MsG0180005730.01.T01:intron 30.0%
TACAAGTACAATGTGAAAGT+AGG + Chr1:95389467-95389486 None:intergenic 30.0%
TACACAAACACAACCAAATA+CGG - Chr1:95386277-95386296 MsG0180005730.01.T01:intron 30.0%
TATATGTTTGAAGGATGTGT+GGG + Chr1:95384165-95384184 None:intergenic 30.0%
TCAAATTCCACAACACTATT+AGG + Chr1:95388712-95388731 None:intergenic 30.0%
TGAAATCTCATTCAACTTGA+TGG + Chr1:95383143-95383162 None:intergenic 30.0%
TGATTATGTGTTATCCAGAT+AGG + Chr1:95383586-95383605 None:intergenic 30.0%
TGCAAAACATCTCTAATATG+AGG - Chr1:95383440-95383459 MsG0180005730.01.T01:intron 30.0%
TGTGAATGAGGAAAGAAAAA+AGG - Chr1:95383047-95383066 MsG0180005730.01.T01:intron 30.0%
TGTTTGTAAGAGTGATTGTT+TGG + Chr1:95383527-95383546 None:intergenic 30.0%
TTAAGTAATGATTGCATGCA+AGG + Chr1:95383355-95383374 None:intergenic 30.0%
TTAATTATGCGTTGTCAGTT+GGG - Chr1:95386127-95386146 MsG0180005730.01.T01:intron 30.0%
TTACTGCATTATTGACCAAT+TGG - Chr1:95386494-95386513 MsG0180005730.01.T01:intron 30.0%
TTATGCAAGACAATGTCAAA+TGG + Chr1:95389176-95389195 None:intergenic 30.0%
TTCTTACTTATGTTTGCAAC+AGG + Chr1:95384622-95384641 None:intergenic 30.0%
TTCTTGTAAACATACCAAAC+TGG - Chr1:95388238-95388257 MsG0180005730.01.T01:intron 30.0%
TTGTTCATAAGAAAGATACC+GGG - Chr1:95388381-95388400 MsG0180005730.01.T01:intron 30.0%
! AAAAATGGGCACTCAAATTT+TGG + Chr1:95382546-95382565 None:intergenic 30.0%
! AAGGACCACAATTATTTTCA+AGG + Chr1:95381569-95381588 None:intergenic 30.0%
! AATTAGTTTCACGAATACCT+AGG - Chr1:95384468-95384487 MsG0180005730.01.T01:intron 30.0%
! ACAATTTTCTGACCCAAAAA+CGG + Chr1:95387757-95387776 None:intergenic 30.0%
! AGAAAGAAAAAGTGTGGATT+GGG + Chr1:95387443-95387462 None:intergenic 30.0%
! AGTTTTTCTGACTATGAAGT+TGG + Chr1:95383627-95383646 None:intergenic 30.0%
! ATATCAAACAAGAGCACAAA+AGG + Chr1:95388868-95388887 None:intergenic 30.0%
! ATATTGTCAACTATGGATTG+CGG + Chr1:95388821-95388840 None:intergenic 30.0%
! ATTTTCGGTATGAGACTAAA+CGG - Chr1:95387670-95387689 MsG0180005730.01.T01:intron 30.0%
! CAAAGGTTGAGCATAAATTT+TGG + Chr1:95388321-95388340 None:intergenic 30.0%
! CATATTAGAGATGTTTTGCA+TGG + Chr1:95383440-95383459 None:intergenic 30.0%
! GAAATGATGGAATGTAAATG+TGG - Chr1:95387232-95387251 MsG0180005730.01.T01:intron 30.0%
! GCAATTACAAATTTTGTTGC+AGG + Chr1:95384296-95384315 None:intergenic 30.0%
! GTTTGTTACCAAAAATCTCA+AGG - Chr1:95382379-95382398 MsG0180005730.01.T01:intron 30.0%
! TACCGGGATTTAAAATTACA+AGG - Chr1:95388397-95388416 MsG0180005730.01.T01:intron 30.0%
! TGTATAACTCTTATAACGGA+TGG - Chr1:95382302-95382321 MsG0180005730.01.T01:intron 30.0%
! TTGACTCTTGATCTTTTGAT+TGG - Chr1:95388586-95388605 MsG0180005730.01.T01:intron 30.0%
! TTTATTGAAGTGAGGTGTTA+GGG + Chr1:95381752-95381771 None:intergenic 30.0%
!! CACATAATTTTTAGGCATTC+AGG + Chr1:95389087-95389106 None:intergenic 30.0%
!! CCTCTATTTTGTTTGTTACA+GGG + Chr1:95383926-95383945 None:intergenic 30.0%
!! CTCTATTTTGTTTGTTACAG+GGG + Chr1:95383925-95383944 None:intergenic 30.0%
!! CTTTCTTCTTCATTTTTGAG+TGG - Chr1:95382026-95382045 MsG0180005730.01.T01:intron 30.0%
!! GAAACTAATTTAGCTCTGTT+TGG + Chr1:95384458-95384477 None:intergenic 30.0%
!! GGTAACTTTCTAGAAGATTT+TGG + Chr1:95383702-95383721 None:intergenic 30.0%
!! GGTAATCTTGTTATTGTCTT+TGG - Chr1:95388271-95388290 MsG0180005730.01.T01:intron 30.0%
!! TACATGGTTCAAAGTTTTGA+TGG - Chr1:95389044-95389063 MsG0180005730.01.T01:intron 30.0%
!! TAGTAGAGTTTGTTACAAGT+GGG + Chr1:95386843-95386862 None:intergenic 30.0%
!! TCCTCTATTTTGTTTGTTAC+AGG + Chr1:95383927-95383946 None:intergenic 30.0%
!! TTATGGTTTTGCTGAATTTG+TGG - Chr1:95389292-95389311 MsG0180005730.01.T01:CDS 30.0%
!! TTTTATTGAAGTGAGGTGTT+AGG + Chr1:95381753-95381772 None:intergenic 30.0%
!!! AAAAAGCAGGGTCATTTTTT+GGG - Chr1:95382490-95382509 MsG0180005730.01.T01:intron 30.0%
!!! AAAATGACCCTGCTTTTTAT+AGG + Chr1:95382488-95382507 None:intergenic 30.0%
!!! ATTTTTGCTCGTTTTTTTCC+TGG + Chr1:95380994-95381013 None:intergenic 30.0%
!!! CTAGAAGATTTTGGTTGTTT+AGG + Chr1:95383693-95383712 None:intergenic 30.0%
!!! GGATTTTAAAGTTCATCCAA+AGG - Chr1:95385211-95385230 MsG0180005730.01.T01:intron 30.0%
!!! GTGGATTGGGATTTTTTTTT+GGG + Chr1:95387430-95387449 None:intergenic 30.0%
!!! TAAAAAGCAGGGTCATTTTT+TGG - Chr1:95382489-95382508 MsG0180005730.01.T01:intron 30.0%
!!! TGTGGATTGGGATTTTTTTT+TGG + Chr1:95387431-95387450 None:intergenic 30.0%
!!! TTGAATACTTTTTTTAGCCC+AGG + Chr1:95381187-95381206 None:intergenic 30.0%
AAAACCTTGTCGCTAAATGA+GGG + Chr1:95388660-95388679 None:intergenic 35.0%
AAAGTGGATGATAGAATCTC+AGG - Chr1:95385378-95385397 MsG0180005730.01.T01:intron 35.0%
AATATATCATGTGACCCAAG+TGG + Chr1:95385681-95385700 None:intergenic 35.0%
AATTAGGCCGTTAAGTTAGA+CGG - Chr1:95385833-95385852 MsG0180005730.01.T01:intron 35.0%
AATTCATATGCCAACAGTGA+AGG + Chr1:95386016-95386035 None:intergenic 35.0%
ACACTCAAACCCAATATTGA+TGG + Chr1:95383723-95383742 None:intergenic 35.0%
ACACTGGTGTATTCAATATG+TGG + Chr1:95383856-95383875 None:intergenic 35.0%
ACAGATATTTGCATCATGGT+GGG + Chr1:95386345-95386364 None:intergenic 35.0%
ACAGGTTAAATGAGATGGTA+AGG + Chr1:95384604-95384623 None:intergenic 35.0%
ACTGACAACGCATAATTAAG+TGG + Chr1:95386126-95386145 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGTGA+TGG - Chr1:95387708-95387727 MsG0180005730.01.T01:intron 35.0%
AGTAGACTGAGAATATGCTT+AGG + Chr1:95385982-95386001 None:intergenic 35.0%
ATAAGAAATCCCAGACAAAG+TGG - Chr1:95385362-95385381 MsG0180005730.01.T01:intron 35.0%
ATAGATGCTGCAAACTGTAA+GGG + Chr1:95386528-95386547 None:intergenic 35.0%
ATCAAATCGCGTTGGAAAAT+CGG - Chr1:95380481-95380500 MsG0180005730.01.T01:CDS 35.0%
ATCTCAACATTCGTTGCAAA+AGG - Chr1:95385756-95385775 MsG0180005730.01.T01:intron 35.0%
ATGTACGACTTCAATATGTG+TGG + Chr1:95384052-95384071 None:intergenic 35.0%
ATTATTCATACCTGCTCTGT+GGG + Chr1:95387153-95387172 None:intergenic 35.0%
ATTCTATCATCCACTTTGTC+TGG + Chr1:95385375-95385394 None:intergenic 35.0%
CACACATATTTAGTTAAGGG+AGG - Chr1:95385798-95385817 MsG0180005730.01.T01:intron 35.0%
CACTACAGATATTTGCATCA+TGG + Chr1:95386349-95386368 None:intergenic 35.0%
CAGTAAATGTCATGTCCAAA+TGG + Chr1:95386173-95386192 None:intergenic 35.0%
CATGATGCAAATATCTGTAG+TGG - Chr1:95386347-95386366 MsG0180005730.01.T01:intron 35.0%
CATTATTGACCAATTGGACT+TGG - Chr1:95386500-95386519 MsG0180005730.01.T01:intron 35.0%
CCCTGTAACAAACAAAATAG+AGG - Chr1:95383923-95383942 MsG0180005730.01.T01:intron 35.0%
CCTATCTTTACAATAAGAGC+CGG - Chr1:95382836-95382855 MsG0180005730.01.T01:intron 35.0%
CTATCTTTACAATAAGAGCC+GGG - Chr1:95382837-95382856 MsG0180005730.01.T01:intron 35.0%
CTGACAACGCATAATTAAGT+GGG + Chr1:95386125-95386144 None:intergenic 35.0%
CTGGGTTTGAACATTACATA+AGG - Chr1:95382003-95382022 MsG0180005730.01.T01:intron 35.0%
CTTAATTATGCGTTGTCAGT+TGG - Chr1:95386126-95386145 MsG0180005730.01.T01:intron 35.0%
GAAAGAAAAAAGGAAGGAGA+AGG - Chr1:95383057-95383076 MsG0180005730.01.T01:intron 35.0%
GATGGAATGTAAATGTGGAA+TGG - Chr1:95387237-95387256 MsG0180005730.01.T01:intron 35.0%
GATTCATATATCCACCACTT+GGG - Chr1:95385664-95385683 MsG0180005730.01.T01:intron 35.0%
GCATTCGTCATGTAACAAAA+AGG - Chr1:95383821-95383840 MsG0180005730.01.T01:CDS 35.0%
GCATTTGACCTATAAAAAGC+AGG - Chr1:95382477-95382496 MsG0180005730.01.T01:intron 35.0%
GTAGACTGAGAATATGCTTA+GGG + Chr1:95385981-95386000 None:intergenic 35.0%
GTGGCCAAATAAATCAAGAT+CGG + Chr1:95386226-95386245 None:intergenic 35.0%
TAATGAGATCTTACGATCCA+AGG + Chr1:95382149-95382168 None:intergenic 35.0%
TAATTATGCGTTGTCAGTTG+GGG - Chr1:95386128-95386147 MsG0180005730.01.T01:intron 35.0%
TACAGATATTTGCATCATGG+TGG + Chr1:95386346-95386365 None:intergenic 35.0%
TACCAACTGAGATAAGTACA+AGG + Chr1:95381689-95381708 None:intergenic 35.0%
TACCAAGAAACAAACCAGTT+TGG + Chr1:95388255-95388274 None:intergenic 35.0%
TATAATTCATTGCCTCTCAG+TGG - Chr1:95385077-95385096 MsG0180005730.01.T01:intron 35.0%
TATCTCTCTATGTGTCTTGT+TGG - Chr1:95386577-95386596 MsG0180005730.01.T01:intron 35.0%
TATCTTGCCTCTTAGTTCAT+TGG + Chr1:95383764-95383783 None:intergenic 35.0%
TATTATTCATACCTGCTCTG+TGG + Chr1:95387154-95387173 None:intergenic 35.0%
TCACTATCTCAATCTTGGTT+TGG + Chr1:95383796-95383815 None:intergenic 35.0%
TCTATGCAAGAATGCTATAG+AGG + Chr1:95388775-95388794 None:intergenic 35.0%
TGAATTATAGCTGAGAATCG+GGG + Chr1:95385066-95385085 None:intergenic 35.0%
TGCAAATATTCCTTCACTGT+TGG - Chr1:95386003-95386022 MsG0180005730.01.T01:intron 35.0%
TGTGGCATGCAAGAATATAT+TGG + Chr1:95385585-95385604 None:intergenic 35.0%
TGTTGAACCGTCTAACTTAA+CGG + Chr1:95385843-95385862 None:intergenic 35.0%
TGTTGTTAATCAAATCGCGT+TGG - Chr1:95380473-95380492 MsG0180005730.01.T01:CDS 35.0%
TTCTATCATCCACTTTGTCT+GGG + Chr1:95385374-95385393 None:intergenic 35.0%
TTGAACCATGTATTCAACCA+AGG + Chr1:95389036-95389055 None:intergenic 35.0%
TTGAGCTACAGACATTACAT+CGG + Chr1:95388175-95388194 None:intergenic 35.0%
TTGCAACAGGTTAAATGAGA+TGG + Chr1:95384609-95384628 None:intergenic 35.0%
TTGGGTCAGAAAATTGTTGT+TGG - Chr1:95387760-95387779 MsG0180005730.01.T01:intron 35.0%
TTGTACTTATCTCAGTTGGT+AGG - Chr1:95381688-95381707 MsG0180005730.01.T01:intron 35.0%
TTTCTTCTTACTCTGTCTCA+AGG + Chr1:95383095-95383114 None:intergenic 35.0%
! AATGAGGGCATAAATGATTG+CGG + Chr1:95388645-95388664 None:intergenic 35.0%
! ACAAGCTCAATTTTCAGTCA+TGG + Chr1:95385477-95385496 None:intergenic 35.0%
! ACCAATTACACAAGCCTTTT+GGG - Chr1:95386755-95386774 MsG0180005730.01.T01:intron 35.0%
! ATTCACAAAAGCACGTTTAC+AGG + Chr1:95386659-95386678 None:intergenic 35.0%
! GAGAAAGAAAAAGTGTGGAT+TGG + Chr1:95387444-95387463 None:intergenic 35.0%
! TGATGGGTAATGTAACAGTT+TGG - Chr1:95385937-95385956 MsG0180005730.01.T01:intron 35.0%
! TGGGTCAGAAAATTGTTGTT+GGG - Chr1:95387761-95387780 MsG0180005730.01.T01:intron 35.0%
! TGTACTTATCTCAGTTGGTA+GGG - Chr1:95381689-95381708 MsG0180005730.01.T01:intron 35.0%
! TGTGTAATTGGTGTGTTGAT+CGG + Chr1:95386747-95386766 None:intergenic 35.0%
!! AGACTCGTTGATTTGGAATA+TGG + Chr1:95384249-95384268 None:intergenic 35.0%
!! AGCACCCTGTTGTATTTTTA+TGG + Chr1:95381226-95381245 None:intergenic 35.0%
!! CAATGTATGAGTTTTGACCT+CGG + Chr1:95388364-95388383 None:intergenic 35.0%
!! CTTTAGGTTTTGATGGTCTT+TGG - Chr1:95382087-95382106 MsG0180005730.01.T01:CDS 35.0%
!! GAGGTAACTTTAGGTTTTGA+TGG - Chr1:95382080-95382099 MsG0180005730.01.T01:CDS 35.0%
!! GTAGTAGAGTTTGTTACAAG+TGG + Chr1:95386844-95386863 None:intergenic 35.0%
!! TACCAAACTGGTTTGTTTCT+TGG - Chr1:95388250-95388269 MsG0180005730.01.T01:intron 35.0%
!! TTTGACTTGCATGGAAATGA+TGG - Chr1:95387219-95387238 MsG0180005730.01.T01:intron 35.0%
!! TTTTGTTTGTTACAGGGGTA+TGG + Chr1:95383920-95383939 None:intergenic 35.0%
!!! ACACTTTTTTTTCGGCATGA+AGG - Chr1:95381881-95381900 MsG0180005730.01.T01:intron 35.0%
!!! CACTTTTTTTTCGGCATGAA+GGG - Chr1:95381882-95381901 MsG0180005730.01.T01:intron 35.0%
!!! CCGTTTTTTGGTTTATTTCC+AGG - Chr1:95380973-95380992 MsG0180005730.01.T01:intron 35.0%
!!! CTTTGAATCAGGGGTATTTT+CGG - Chr1:95387655-95387674 MsG0180005730.01.T01:intron 35.0%
!!! GATTTTGGTTGTTTAGGTGT+TGG + Chr1:95383687-95383706 None:intergenic 35.0%
!!! TATGAGTCTTTTGACTTGCA+TGG - Chr1:95387210-95387229 MsG0180005730.01.T01:intron 35.0%
!!! TTAGCACATTTTTTGTCTGG+TGG - Chr1:95385555-95385574 MsG0180005730.01.T01:intron 35.0%
AAAAGGAAGGAGAAGGGATA+TGG - Chr1:95383064-95383083 MsG0180005730.01.T01:intron 40.0%
AAAGGAAGGAGAAGGGATAT+GGG - Chr1:95383065-95383084 MsG0180005730.01.T01:intron 40.0%
AAATGGGACCAATTGACAGA+GGG - Chr1:95384205-95384224 MsG0180005730.01.T01:intron 40.0%
AAGTTGCGTGTTCTGACAAT+GGG - Chr1:95380628-95380647 MsG0180005730.01.T01:intron 40.0%
AATTATGCGTTGTCAGTTGG+GGG - Chr1:95386129-95386148 MsG0180005730.01.T01:intron 40.0%
AATTGAGAAAGAGGAGAACC+TGG - Chr1:95380512-95380531 MsG0180005730.01.T01:CDS 40.0%
ACATGGGTAACACGTCTTTA+TGG + Chr1:95384370-95384389 None:intergenic 40.0%
ACATTGGTGCATGTTCTTAG+AGG + Chr1:95383404-95383423 None:intergenic 40.0%
ACCAAAGAACAAGGTGCAAA+TGG - Chr1:95385337-95385356 MsG0180005730.01.T01:intron 40.0%
ACTTAGCGACATGCAAAGAA+AGG + Chr1:95384029-95384048 None:intergenic 40.0%
AGAGACATATAGCGTGTGTT+TGG + Chr1:95386695-95386714 None:intergenic 40.0%
AGCAATGGTTCAACAACGTA+AGG + Chr1:95381653-95381672 None:intergenic 40.0%
AGGTAAAGGCAATGACCATT+TGG - Chr1:95386155-95386174 MsG0180005730.01.T01:intron 40.0%
AGGTATGGGTTCAAGGTTTA+AGG + Chr1:95381513-95381532 None:intergenic 40.0%
AGTCGTACATCCAAGTTACT+AGG - Chr1:95384062-95384081 MsG0180005730.01.T01:intron 40.0%
ATTATTAGCTAGTACCTCGG+AGG + Chr1:95385621-95385640 None:intergenic 40.0%
ATTCAGTTCGAAACTCATCC+AGG + Chr1:95380533-95380552 None:intergenic 40.0%
CAAGGTAATAAAAACCGGAC+CGG - Chr1:95380827-95380846 MsG0180005730.01.T01:intron 40.0%
CAAGGTAATTAAAACCGGAC+CGG + Chr1:95381551-95381570 None:intergenic 40.0%
CACTTCCTTGGTTGAATACA+TGG - Chr1:95389028-95389047 MsG0180005730.01.T01:intron 40.0%
CAGCTCATTGGACTCATATA+AGG - Chr1:95385181-95385200 MsG0180005730.01.T01:intron 40.0%
CATAGATGCTGCAAACTGTA+AGG + Chr1:95386529-95386548 None:intergenic 40.0%
CATGTATTCAACCAAGGAAG+TGG + Chr1:95389030-95389049 None:intergenic 40.0%
CCGGCTCTTATTGTAAAGAT+AGG + Chr1:95382839-95382858 None:intergenic 40.0%
CGATTCATATATCCACCACT+TGG - Chr1:95385663-95385682 MsG0180005730.01.T01:intron 40.0%
CGTCAAAACCAAAATCTGAC+CGG + Chr1:95380575-95380594 None:intergenic 40.0%
CTCAATATGGACAACTCCAA+AGG + Chr1:95388338-95388357 None:intergenic 40.0%
CTGTGCAGTGTATTATTTGC+TGG - Chr1:95387983-95388002 MsG0180005730.01.T01:intron 40.0%
CTTAGGGTTAGACGTGATTT+GGG + Chr1:95385965-95385984 None:intergenic 40.0%
GAAAACCTTGTCGCTAAATG+AGG + Chr1:95388661-95388680 None:intergenic 40.0%
GAATAAAGAGAAGGACTGAG+TGG - Chr1:95381098-95381117 MsG0180005730.01.T01:intron 40.0%
GATGAGTTTCGAACTGAATC+TGG - Chr1:95380534-95380553 MsG0180005730.01.T01:intron 40.0%
GCAGAGAGAAAGAAAAAGTG+TGG + Chr1:95387449-95387468 None:intergenic 40.0%
GCAGTTGACATGATTATTGC+TGG + Chr1:95383502-95383521 None:intergenic 40.0%
GGTATGGGTTCAAGGTTTAA+GGG + Chr1:95381512-95381531 None:intergenic 40.0%
GTCAGTAGCATAAGTGTGAT+AGG - Chr1:95383465-95383484 MsG0180005730.01.T01:intron 40.0%
GTCCTTGTACTTATCTCAGT+TGG - Chr1:95381684-95381703 MsG0180005730.01.T01:intron 40.0%
GTTGTTGAACCATTGCTAGA+AGG - Chr1:95381656-95381675 MsG0180005730.01.T01:intron 40.0%
GTTTGCAGCATCTATGAAGA+CGG - Chr1:95386533-95386552 MsG0180005730.01.T01:intron 40.0%
GTTTGTAAAACGGAGTTCGA+TGG - Chr1:95386606-95386625 MsG0180005730.01.T01:intron 40.0%
TAGTTCTCTCTCCTGTATGT+AGG - Chr1:95382330-95382349 MsG0180005730.01.T01:intron 40.0%
TATGTGTAATGCAGGAGCAA+GGG - Chr1:95389101-95389120 MsG0180005730.01.T01:intron 40.0%
TCAAGGTTTAAGGGTTTGAC+CGG + Chr1:95381503-95381522 None:intergenic 40.0%
TCCATTTGCACCTTGTTCTT+TGG + Chr1:95385341-95385360 None:intergenic 40.0%
TCCCAAAAGGCTTGTGTAAT+TGG + Chr1:95386759-95386778 None:intergenic 40.0%
TCGAAGTTCGTCAAAAATCG+CGG - Chr1:95381823-95381842 MsG0180005730.01.T01:CDS 40.0%
TCTATGAAGACGGTTAGATC+TGG - Chr1:95386543-95386562 MsG0180005730.01.T01:intron 40.0%
TGGACTCATATAAGGTCACA+GGG - Chr1:95385189-95385208 MsG0180005730.01.T01:intron 40.0%
TTAGGGTTAGACGTGATTTG+GGG + Chr1:95385964-95385983 None:intergenic 40.0%
TTATGTGTAATGCAGGAGCA+AGG - Chr1:95389100-95389119 MsG0180005730.01.T01:intron 40.0%
TTATTAGCTAGTACCTCGGA+GGG + Chr1:95385620-95385639 None:intergenic 40.0%
TTATTCATACCTGCTCTGTG+GGG + Chr1:95387152-95387171 None:intergenic 40.0%
TTCCTGTAAAATCAGAGACC+CGG + Chr1:95382858-95382877 None:intergenic 40.0%
TTCGCAATGACAATGGAGAT+TGG + Chr1:95383656-95383675 None:intergenic 40.0%
TTGACCTCGGATTCTCAATA+TGG + Chr1:95388351-95388370 None:intergenic 40.0%
TTGGACTCATATAAGGTCAC+AGG - Chr1:95385188-95385207 MsG0180005730.01.T01:intron 40.0%
TTGTCCATATTGAGAATCCG+AGG - Chr1:95388344-95388363 MsG0180005730.01.T01:intron 40.0%
! ACTATGGATTGCGGAAATAG+AGG + Chr1:95388812-95388831 None:intergenic 40.0%
! ATGTTTGGAGTTACCACTGT+CGG - Chr1:95388989-95389008 MsG0180005730.01.T01:intron 40.0%
! CACCAATTACACAAGCCTTT+TGG - Chr1:95386754-95386773 MsG0180005730.01.T01:intron 40.0%
! CTAGGTCATTAAAGCGTTCA+GGG - Chr1:95384486-95384505 MsG0180005730.01.T01:intron 40.0%
! GCCAAAGTTTTCATCCCAAA+AGG + Chr1:95386772-95386791 None:intergenic 40.0%
! GGTCTCTGATTTTACAGGAA+CGG - Chr1:95382858-95382877 MsG0180005730.01.T01:intron 40.0%
! GTCTTTGGTGAGAGGTTTTT+GGG - Chr1:95382102-95382121 MsG0180005730.01.T01:CDS 40.0%
! GTGTAATTGGTGTGTTGATC+GGG + Chr1:95386746-95386765 None:intergenic 40.0%
! TTGAGTGTACCTTCTAGAGA+GGG - Chr1:95383735-95383754 MsG0180005730.01.T01:intron 40.0%
! TTTGAGTGTACCTTCTAGAG+AGG - Chr1:95383734-95383753 MsG0180005730.01.T01:intron 40.0%
! TTTTAGTCAGTGCAGCTCAT+TGG - Chr1:95385169-95385188 MsG0180005730.01.T01:intron 40.0%
!! ATATTTGCATCATGGTGGGT+AGG + Chr1:95386341-95386360 None:intergenic 40.0%
!! GCACTCAAATTTTGGAAGCT+CGG + Chr1:95382538-95382557 None:intergenic 40.0%
!! TATTTGCATCATGGTGGGTA+GGG + Chr1:95386340-95386359 None:intergenic 40.0%
!! TCTTCTAGCTCCTAGTAACT+TGG + Chr1:95384075-95384094 None:intergenic 40.0%
!! TTTGGTTGTTTAGGTGTTGG+TGG + Chr1:95383684-95383703 None:intergenic 40.0%
!! TTTTGATGGTCTTTGGTGAG+AGG - Chr1:95382094-95382113 MsG0180005730.01.T01:CDS 40.0%
!!! CAGCAGGTTAAACCGTTTTT+TGG - Chr1:95380961-95380980 MsG0180005730.01.T01:intron 40.0%
!!! CGGTCAGATTTTGGTTTTGA+CGG - Chr1:95380573-95380592 MsG0180005730.01.T01:intron 40.0%
!!! CTTCTTCATTTTTGAGTGGC+TGG - Chr1:95382030-95382049 MsG0180005730.01.T01:intron 40.0%
!!! GCCTTTTGGGATGAAAACTT+TGG - Chr1:95386768-95386787 MsG0180005730.01.T01:intron 40.0%
!!! TCAGATTTTGGTTTTGACGG+CGG - Chr1:95380576-95380595 MsG0180005730.01.T01:intron 40.0%
AACAAGCCACTGTCAGAACA+AGG - Chr1:95389149-95389168 MsG0180005730.01.T01:intron 45.0%
AAGGTTTAAGGGTTTGACCG+GGG + Chr1:95381501-95381520 None:intergenic 45.0%
AAGTTGAACCGGTGAAGGTA+TGG + Chr1:95381528-95381547 None:intergenic 45.0%
AATGGACCTTGTTCTGACAG+TGG + Chr1:95389158-95389177 None:intergenic 45.0%
AATGGGACCAATTGACAGAG+GGG - Chr1:95384206-95384225 MsG0180005730.01.T01:intron 45.0%
ACACAATTATGAACCCTCCG+AGG - Chr1:95385604-95385623 MsG0180005730.01.T01:intron 45.0%
ACGGAGTTCGATGGAAATCA+CGG - Chr1:95386615-95386634 MsG0180005730.01.T01:intron 45.0%
AGATGGTAAGGAGTTTCCTG+GGG + Chr1:95384592-95384611 None:intergenic 45.0%
AGGATGAGAGATTTCATGCC+AGG - Chr1:95383302-95383321 MsG0180005730.01.T01:CDS 45.0%
AGGCTACAGCACAGATGATT+TGG + Chr1:95388692-95388711 None:intergenic 45.0%
AGGGGATCCAATGAACTAAG+AGG - Chr1:95383754-95383773 MsG0180005730.01.T01:CDS 45.0%
ATATCATGTGACCCAAGTGG+TGG + Chr1:95385678-95385697 None:intergenic 45.0%
ATCAATCGCGGAACCGATTA+TGG + Chr1:95387583-95387602 None:intergenic 45.0%
ATGATGTCTCTGTAGCCTGT+AGG - Chr1:95381012-95381031 MsG0180005730.01.T01:intron 45.0%
ATGTGTAATGCAGGAGCAAG+GGG - Chr1:95389102-95389121 MsG0180005730.01.T01:intron 45.0%
ATGTTTGAAGGATGTGTGGG+AGG + Chr1:95384162-95384181 None:intergenic 45.0%
ATTCAACCAAGGAAGTGGTC+AGG + Chr1:95389025-95389044 None:intergenic 45.0%
CAAATGGGACCAATTGACAG+AGG - Chr1:95384204-95384223 MsG0180005730.01.T01:intron 45.0%
CAAATTGTAGCGCGATTTCG+AGG - Chr1:95381907-95381926 MsG0180005730.01.T01:intron 45.0%
CAAGGTTTAAGGGTTTGACC+GGG + Chr1:95381502-95381521 None:intergenic 45.0%
CAAGTTGCGTGTTCTGACAA+TGG - Chr1:95380627-95380646 MsG0180005730.01.T01:intron 45.0%
CCTGAACGCTTTAATGACCT+AGG + Chr1:95384488-95384507 None:intergenic 45.0%
CTCTGTTTGGTAAGTCAGTG+TGG + Chr1:95384445-95384464 None:intergenic 45.0%
GAAACACCTCACAAACACCT+TGG - Chr1:95382129-95382148 MsG0180005730.01.T01:CDS 45.0%
GAACCATTGCTAGAAGGATG+TGG - Chr1:95381662-95381681 MsG0180005730.01.T01:intron 45.0%
GAGATGGTAAGGAGTTTCCT+GGG + Chr1:95384593-95384612 None:intergenic 45.0%
GAGCGGTATTTATACGTTGC+CGG + Chr1:95380895-95380914 None:intergenic 45.0%
GAGGCTCTCACATGTCAATT+AGG - Chr1:95385817-95385836 MsG0180005730.01.T01:intron 45.0%
GAGTTTCGAACTGAATCTGG+CGG - Chr1:95380537-95380556 MsG0180005730.01.T01:intron 45.0%
GATGGTAAGTGGAACTTGTG+AGG + Chr1:95384140-95384159 None:intergenic 45.0%
GCTGTAGCCTAATAGTGTTG+TGG - Chr1:95388702-95388721 MsG0180005730.01.T01:intron 45.0%
GCTTAGGGTTAGACGTGATT+TGG + Chr1:95385966-95385985 None:intergenic 45.0%
GGAACAAACTGGAAAACCGA+AGG - Chr1:95380928-95380947 MsG0180005730.01.T01:intron 45.0%
GGACTCATATAAGGTCACAG+GGG - Chr1:95385190-95385209 MsG0180005730.01.T01:intron 45.0%
GGAGGGTTCATAATTGTGTG+TGG + Chr1:95385603-95385622 None:intergenic 45.0%
GGCTACAGCACAGATGATTT+GGG + Chr1:95388691-95388710 None:intergenic 45.0%
GGTAGAGATGCACGAAAAGA+AGG - Chr1:95381033-95381052 MsG0180005730.01.T01:intron 45.0%
GTAAGGGATCCAAGTCCAAT+TGG + Chr1:95386512-95386531 None:intergenic 45.0%
GTAATAAAAACCGGACCGGA+CGG - Chr1:95380831-95380850 MsG0180005730.01.T01:intron 45.0%
GTATTTATACGTTGCCGGAC+CGG + Chr1:95380890-95380909 None:intergenic 45.0%
GTGGTTGATCTCAGTAGAAG+TGG - Chr1:95388934-95388953 MsG0180005730.01.T01:intron 45.0%
TATGCCCTCATTTAGCGACA+AGG - Chr1:95388653-95388672 MsG0180005730.01.T01:intron 45.0%
TGAAAGTAGGCTGAAGTGAG+TGG + Chr1:95389454-95389473 None:intergenic 45.0%
TGAGATGGTAAGGAGTTTCC+TGG + Chr1:95384594-95384613 None:intergenic 45.0%
TTATAGCTGAGAATCGGGGA+AGG + Chr1:95385062-95385081 None:intergenic 45.0%
TTCTTTCCAGTTGTTAGGCG+AGG - Chr1:95389397-95389416 MsG0180005730.01.T01:CDS 45.0%
TTTCGTGCATCTCTACCTAC+AGG + Chr1:95381030-95381049 None:intergenic 45.0%
! AAATCGCGCCACAACTTGTT+TGG + Chr1:95381980-95381999 None:intergenic 45.0%
! AATCGCGCCACAACTTGTTT+GGG + Chr1:95381979-95381998 None:intergenic 45.0%
! AGAAGTGATGGCGAAATCTG+AGG - Chr1:95387720-95387739 MsG0180005730.01.T01:intron 45.0%
! AGTTGAACCGGTGAAGGTAT+GGG + Chr1:95381527-95381546 None:intergenic 45.0%
! CCTAGGTCATTAAAGCGTTC+AGG - Chr1:95384485-95384504 MsG0180005730.01.T01:intron 45.0%
! CTGGAAAACCGAAGGTTTTG+CGG - Chr1:95380936-95380955 MsG0180005730.01.T01:intron 45.0%
! GCTTCAGAGACTCGTTGATT+TGG + Chr1:95384256-95384275 None:intergenic 45.0%
! GGTCTTTGGTGAGAGGTTTT+TGG - Chr1:95382101-95382120 MsG0180005730.01.T01:CDS 45.0%
! GGTTCGATGTTGGAAGGTTT+TGG - Chr1:95381855-95381874 MsG0180005730.01.T01:intron 45.0%
! GTTTTACCTGACCACTTCCT+TGG - Chr1:95389016-95389035 MsG0180005730.01.T01:intron 45.0%
! TACGATCCAAGGTGTTTGTG+AGG + Chr1:95382138-95382157 None:intergenic 45.0%
! TAGGGTTAGACGTGATTTGG+GGG + Chr1:95385963-95385982 None:intergenic 45.0%
! TGAGTGTACCTTCTAGAGAG+GGG - Chr1:95383736-95383755 MsG0180005730.01.T01:intron 45.0%
! TGGATGGACTCTATCGAACT+TGG + Chr1:95384540-95384559 None:intergenic 45.0%
! TGTCGTTTATGTCCACTGAG+AGG + Chr1:95385092-95385111 None:intergenic 45.0%
! TGTTTGGAGTTACCACTGTC+GGG - Chr1:95388990-95389009 MsG0180005730.01.T01:intron 45.0%
! TTACAGGGGTATGGTATGCT+TGG + Chr1:95383911-95383930 None:intergenic 45.0%
!! CTAAAAGTGTCGGTCACGAA+TGG + Chr1:95388216-95388235 None:intergenic 45.0%
!! GGTGTTGTTCGCAATGACAA+TGG + Chr1:95383663-95383682 None:intergenic 45.0%
!! GTGAGTACGACACCGTTTTT+GGG - Chr1:95387742-95387761 MsG0180005730.01.T01:intron 45.0%
!! TCGGTTTTCCAGTTTGTTCC+CGG + Chr1:95380928-95380947 None:intergenic 45.0%
!!! AAGCAGGGTCATTTTTTGGG+AGG - Chr1:95382493-95382512 MsG0180005730.01.T01:intron 45.0%
!!! GCAGGGTATTGTTTTCGTGT+AGG + Chr1:95384278-95384297 None:intergenic 45.0%
!!! GGTTTTGGTTCGATGTTGGA+AGG - Chr1:95381849-95381868 MsG0180005730.01.T01:intron 45.0%
!!! TGGTGAGAGGTTTTTGGGTT+GGG - Chr1:95382107-95382126 MsG0180005730.01.T01:CDS 45.0%
!!! TTGGTGAGAGGTTTTTGGGT+TGG - Chr1:95382106-95382125 MsG0180005730.01.T01:CDS 45.0%
!!! ATTATTTTTTAAATGATATA+AGG - Chr1:95381358-95381377 MsG0180005730.01.T01:intron 5.0%
!!! TTAAATTTAAAGAAATTTTT+TGG - Chr1:95385422-95385441 MsG0180005730.01.T01:intron 5.0%
ACTCTGTCCCCTCTGTCAAT+TGG + Chr1:95384216-95384235 None:intergenic 50.0%
AGAGATTTCATGCCAGGCAG+AGG - Chr1:95383308-95383327 MsG0180005730.01.T01:CDS 50.0%
AGGGTTAGGATAAATGGGCC+TGG - Chr1:95381166-95381185 MsG0180005730.01.T01:intron 50.0%
AGGTTTAAGGGTTTGACCGG+GGG + Chr1:95381500-95381519 None:intergenic 50.0%
ATACCGCTCTGCTACAGAAC+CGG - Chr1:95380906-95380925 MsG0180005730.01.T01:intron 50.0%
ATCATAACCGGTTGAACCCC+CGG - Chr1:95381481-95381500 MsG0180005730.01.T01:intron 50.0%
ATGGTAAGGAGTTTCCTGGG+GGG + Chr1:95384590-95384609 None:intergenic 50.0%
ATGTGTGGGAGGATGGTAAG+TGG + Chr1:95384151-95384170 None:intergenic 50.0%
CATTGGATCCCCTCTCTAGA+AGG + Chr1:95383747-95383766 None:intergenic 50.0%
CCTTGAACCCATACCTTCAC+CGG - Chr1:95381517-95381536 MsG0180005730.01.T01:intron 50.0%
CGTGTACAAGCTCCAAATCG+TGG - Chr1:95381948-95381967 MsG0180005730.01.T01:intron 50.0%
CTACAGAACCGGGAACAAAC+TGG - Chr1:95380917-95380936 MsG0180005730.01.T01:intron 50.0%
CTGCTGAACCGCAAAACCTT+CGG + Chr1:95380947-95380966 None:intergenic 50.0%
GAGATTTCATGCCAGGCAGA+GGG - Chr1:95383309-95383328 MsG0180005730.01.T01:CDS 50.0%
GATGGTAAGGAGTTTCCTGG+GGG + Chr1:95384591-95384610 None:intergenic 50.0%
GGAATGGCGAGAGATCATTG+AGG - Chr1:95389418-95389437 MsG0180005730.01.T01:CDS 50.0%
GGACCACATCCTTCTAGCAA+TGG + Chr1:95381668-95381687 None:intergenic 50.0%
GGGTTAGGATAAATGGGCCT+GGG - Chr1:95381167-95381186 MsG0180005730.01.T01:intron 50.0%
TACTGTAACTACCCTCTGCC+TGG + Chr1:95383323-95383342 None:intergenic 50.0%
TCAGTTGGGGGCAAAGGTAA+AGG - Chr1:95386141-95386160 MsG0180005730.01.T01:intron 50.0%
TCCAGTTGTTAGGCGAGGAA+TGG - Chr1:95389402-95389421 MsG0180005730.01.T01:CDS 50.0%
TGGAGTAGACTGCTGTACTG+AGG - Chr1:95385255-95385274 MsG0180005730.01.T01:intron 50.0%
TTGAAGGATGTGTGGGAGGA+TGG + Chr1:95384158-95384177 None:intergenic 50.0%
! AGCCGGGTCTCTGATTTTAC+AGG - Chr1:95382853-95382872 MsG0180005730.01.T01:intron 50.0%
! GGCGTTTTCCGGTCAGATTT+TGG - Chr1:95380564-95380583 MsG0180005730.01.T01:intron 50.0%
! GGTGAGTACGACACCGTTTT+TGG - Chr1:95387741-95387760 MsG0180005730.01.T01:intron 50.0%
! GTTTGGAGTTACCACTGTCG+GGG - Chr1:95388991-95389010 MsG0180005730.01.T01:intron 50.0%
! TTTGGAGTTACCACTGTCGG+GGG - Chr1:95388992-95389011 MsG0180005730.01.T01:intron 50.0%
!! ACCTTCACCGGTTCAACTTC+CGG - Chr1:95381529-95381548 MsG0180005730.01.T01:intron 50.0%
!! AGTTGTGGCGCGATTTTGAC+TGG - Chr1:95381984-95382003 MsG0180005730.01.T01:intron 50.0%
!! GGGTATGGTATGCTTGGTGT+TGG + Chr1:95383905-95383924 None:intergenic 50.0%
!!! GTTGTGGCGCGATTTTGACT+GGG - Chr1:95381985-95382004 MsG0180005730.01.T01:intron 50.0%
AACCGGACCGGAAGTTGAAC+CGG + Chr1:95381539-95381558 None:intergenic 55.0%
ACCGGAAGTTGAACCGGTGA+AGG + Chr1:95381533-95381552 None:intergenic 55.0%
AGGTAAAACTCCCCCGACAG+TGG + Chr1:95389005-95389024 None:intergenic 55.0%
CATTACCAACCCCACAGAGC+AGG - Chr1:95387140-95387159 MsG0180005730.01.T01:intron 55.0%
CGGAGATGAGGTCAGCACTA+TGG - Chr1:95380596-95380615 MsG0180005730.01.T01:intron 55.0%
GAGAAGGACTGAGTGGCTGA+CGG - Chr1:95381105-95381124 MsG0180005730.01.T01:intron 55.0%
GCCATTCCTCGCCTAACAAC+TGG + Chr1:95389406-95389425 None:intergenic 55.0%
GGCACGACCCAAACAAGTTG+TGG - Chr1:95381969-95381988 MsG0180005730.01.T01:intron 55.0%
GTTCGTCAAAAATCGCGGCG+CGG - Chr1:95381828-95381847 MsG0180005730.01.T01:CDS 55.0%
GTTTGGGTCGTGCCACGATT+TGG + Chr1:95381963-95381982 None:intergenic 55.0%
TACCGCTCTGCTACAGAACC+GGG - Chr1:95380907-95380926 MsG0180005730.01.T01:intron 55.0%
TCATACCTGCTCTGTGGGGT+TGG + Chr1:95387148-95387167 None:intergenic 55.0%
TGGTAAGGAGTTTCCTGGGG+GGG + Chr1:95384589-95384608 None:intergenic 55.0%
TGTCGGTCACGAATGGAGCT+CGG + Chr1:95388209-95388228 None:intergenic 55.0%
TTCCCGGTTCTGTAGCAGAG+CGG + Chr1:95380912-95380931 None:intergenic 55.0%
! CAAAAATCGCGGCGCGGTTT+TGG - Chr1:95381834-95381853 MsG0180005730.01.T01:CDS 55.0%
! CCGGTGAAGGTATGGGTTCA+AGG + Chr1:95381520-95381539 None:intergenic 55.0%
! CGAAGGTTTTGCGGTTCAGC+AGG - Chr1:95380945-95380964 MsG0180005730.01.T01:intron 55.0%
!!! GCGCGGTTTTGGTTCGATGT+TGG - Chr1:95381845-95381864 MsG0180005730.01.T01:intron 55.0%
!!! TGGTTTTGACGGCGGAGATG+AGG - Chr1:95380584-95380603 MsG0180005730.01.T01:intron 55.0%
AACCGGACCAATCTCCGGTC+CGG - Chr1:95380873-95380892 MsG0180005730.01.T01:intron 60.0%
ACGGTCCAACCGGTTGAACC+GGG - Chr1:95380850-95380869 MsG0180005730.01.T01:intron 60.0%
CAACCGGTTGAACCGGGAAC+CGG - Chr1:95380856-95380875 MsG0180005730.01.T01:intron 60.0%
CGAACTGAATCTGGCGGCGT+CGG - Chr1:95380543-95380562 MsG0180005730.01.T01:intron 60.0%
GACGGTCCAACCGGTTGAAC+CGG - Chr1:95380849-95380868 MsG0180005730.01.T01:intron 60.0%
GCGTTGTCAGTTGGGGGCAA+AGG - Chr1:95386135-95386154 MsG0180005730.01.T01:intron 60.0%
GGTAAGGAGTTTCCTGGGGG+GGG + Chr1:95384588-95384607 None:intergenic 60.0%
GGTTTGACCGGGGGTTCAAC+CGG + Chr1:95381491-95381510 None:intergenic 60.0%
GTAAGGAGTTTCCTGGGGGG+GGG + Chr1:95384587-95384606 None:intergenic 60.0%
GTCGGTCACGAATGGAGCTC+GGG + Chr1:95388208-95388227 None:intergenic 60.0%
GTTCAACCGGTTGGACCGTC+CGG + Chr1:95380849-95380868 None:intergenic 60.0%
TAAGGAGTTTCCTGGGGGGG+GGG + Chr1:95384586-95384605 None:intergenic 60.0%
TACGTTGCCGGACCGGAGAT+TGG + Chr1:95380883-95380902 None:intergenic 60.0%
TCGGTCACGAATGGAGCTCG+GGG + Chr1:95388207-95388226 None:intergenic 60.0%
!! CACCGGTTCAACTTCCGGTC+CGG - Chr1:95381534-95381553 MsG0180005730.01.T01:intron 60.0%
AAGGAGTTTCCTGGGGGGGG+GGG + Chr1:95384585-95384604 None:intergenic 65.0%
CCGGGAACCGGACCAATCTC+CGG - Chr1:95380868-95380887 MsG0180005730.01.T01:intron 65.0%
CGGTTCCCGGTTCAACCGGT+TGG + Chr1:95380858-95380877 None:intergenic 65.0%
GGTCCGGTTCCCGGTTCAAC+CGG + Chr1:95380862-95380881 None:intergenic 65.0%
! CCGGAGATTGGTCCGGTTCC+CGG + Chr1:95380871-95380890 None:intergenic 65.0%
! TGCCGGACCGGAGATTGGTC+CGG + Chr1:95380878-95380897 None:intergenic 65.0%
ACCGGACCGGACGGTCCAAC+CGG - Chr1:95380840-95380859 MsG0180005730.01.T01:intron 70.0%
ACCGGTTGGACCGTCCGGTC+CGG + Chr1:95380844-95380863 None:intergenic 70.0%
AGGAGTTTCCTGGGGGGGGG+GGG + Chr1:95384584-95384603 None:intergenic 70.0%
!!! CTGGCGGCGTCGGCGTTTTC+CGG - Chr1:95380553-95380572 MsG0180005730.01.T01:intron 70.0%
AGTTTCCTGGGGGGGGGGGG+GGG + Chr1:95384581-95384600 None:intergenic 75.0%
GAGTTTCCTGGGGGGGGGGG+GGG + Chr1:95384582-95384601 None:intergenic 75.0%
GGAGTTTCCTGGGGGGGGGG+GGG + Chr1:95384583-95384602 None:intergenic 75.0%
GTGGGGTGGGGTGGGGTGGA+TGG + Chr1:95384556-95384575 None:intergenic 75.0%
! GTTTCCTGGGGGGGGGGGGG+GGG + Chr1:95384580-95384599 None:intergenic 80.0%
! TTTCCTGGGGGGGGGGGGGG+GGG + Chr1:95384579-95384598 None:intergenic 80.0%
! GGGGGGGGGTGGGGTGGGGT+GGG + Chr1:95384564-95384583 None:intergenic 85.0%
! GGGGGGGGTGGGGTGGGGTG+GGG + Chr1:95384563-95384582 None:intergenic 85.0%
! GGGGGTGGGGTGGGGTGGGG+TGG + Chr1:95384560-95384579 None:intergenic 85.0%
! TTCCTGGGGGGGGGGGGGGG+GGG + Chr1:95384578-95384597 None:intergenic 85.0%
! GGGGGGGGGGGGGGTGGGGT+GGG + Chr1:95384569-95384588 None:intergenic 90.0%
! GGGGGGGGGGGGGTGGGGTG+GGG + Chr1:95384568-95384587 None:intergenic 90.0%
! GGGGGGGGGGTGGGGTGGGG+TGG + Chr1:95384565-95384584 None:intergenic 90.0%
! TGGGGGGGGGGGGGGGGGGT+GGG + Chr1:95384574-95384593 None:intergenic 90.0%
! CACCCCCCCCCCCCCCCCCC+AGG - Chr1:95384573-95384592 MsG0180005730.01.T01:intron 95.0%
! CTGGGGGGGGGGGGGGGGGG+TGG + Chr1:95384575-95384594 None:intergenic 95.0%
! GGGGGGGGGGGGGGGGGGTG+GGG + Chr1:95384573-95384592 None:intergenic 95.0%
! GGGGGGGGGGGGGGGTGGGG+TGG + Chr1:95384570-95384589 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95380472 95389487 95380472 ID=MsG0180005730.01;Name=MsG0180005730.01
Chr1 mRNA 95380472 95389487 95380472 ID=MsG0180005730.01.T01;Parent=MsG0180005730.01;Name=MsG0180005730.01.T01;_AED=0.70;_eAED=0.84;_QI=0|0.16|0.14|0.57|0.66|0.71|7|0|334
Chr1 exon 95389246 95389487 95389246 ID=MsG0180005730.01.T01:exon:10464;Parent=MsG0180005730.01.T01
Chr1 exon 95383753 95383840 95383753 ID=MsG0180005730.01.T01:exon:10463;Parent=MsG0180005730.01.T01
Chr1 exon 95383301 95383425 95383301 ID=MsG0180005730.01.T01:exon:10462;Parent=MsG0180005730.01.T01
Chr1 exon 95382066 95382293 95382066 ID=MsG0180005730.01.T01:exon:10461;Parent=MsG0180005730.01.T01
Chr1 exon 95381700 95381858 95381700 ID=MsG0180005730.01.T01:exon:10460;Parent=MsG0180005730.01.T01
Chr1 exon 95380763 95380844 95380763 ID=MsG0180005730.01.T01:exon:10459;Parent=MsG0180005730.01.T01
Chr1 exon 95380472 95380552 95380472 ID=MsG0180005730.01.T01:exon:10458;Parent=MsG0180005730.01.T01
Chr1 CDS 95389246 95389487 95389246 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Chr1 CDS 95383753 95383840 95383753 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Chr1 CDS 95383301 95383425 95383301 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Chr1 CDS 95382066 95382293 95382066 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Chr1 CDS 95381700 95381858 95381700 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Chr1 CDS 95380763 95380844 95380763 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Chr1 CDS 95380472 95380552 95380472 ID=MsG0180005730.01.T01:cds;Parent=MsG0180005730.01.T01
Gene Sequence

>MsG0180005730.01.T01

ATGTTGTTAATCAAATCGCGTTGGAAAATCGGAAAAGTGAAATTGAGAAAGAGGAGAACCTGGATGAGTTTCGAACTGAATCTGGCGGCGTCGGCGTTTTCCGGTCAGATTTTGGTTTTGACGGCGGAGATGAGGTCAGCACTATGGACTGAGTACAAGTTGCGTGTTCTGACAATGGGAAAGATAATGACGCTACTGAATTTTAGTGTTAGATTAGATTTATTTAGTTTGGGAGTTTTAGGTTGCCCACTTAATTATGCGTTGTCAGTTGGGGGCAAAGGTAAAGGCAATGACCATTTGGACATGACATTTACTGTGAAGCTTCATCATTTTGCAGCATCTATGAAGACGGTTAGATCTGGCAAGAAATTTGTATCTCTCTATGTGTCTTGTTGGTACAATGTTTGTAAAACGGAGTTCGATGGAAATCACGGTAGAATTGCACTAGATAACCTGGGTATTTTCGGTATGAGACTAAACGGAGAAATCTCAAGCGAAGAAGAAGAAGAAGAAGTGATGGCGAAATCTGAGGTGAGTACGACACCGTTTTTGGGTCAGAAAATTGTTGTTGGGTATGCTTTAACTGCGAAGAAGAAGAAAAGTTTTCTTCAGCCAAATTTCATTTCTCTTGCAAGGTACAATTTTTACTATTTACCAATGATTTTCTTTTTGATCATTTTCATTGCGAGTAAAAGTCTCACTTTTGATGAAAAAGCTGACATAGAACTACATATAAGTGAGATGACTGATATATCCGATGTAATGTCTGTAGCTCAATGTGATGATCCCCGAGCTCCATTCGTGACCGACACTTTTAGATTTCTTGTAAACATACCAAACTGGAGCAAGGGGATATACTTTGTTAACATTGATCTAAACAAGCCACTGTCAGAACAAGGTCCATTTGACATTGTCTTGCATAAGTTGTTAGGCGAGGAATGGCGAGAGATCATTGAGGTTTGTAAACTCCACTCACTTCAGCCTACTTTCACATTGTACTTGTAA

Protein sequence

>MsG0180005730.01.T01

MLLIKSRWKIGKVKLRKRRTWMSFELNLAASAFSGQILVLTAEMRSALWTEYKLRVLTMGKIMTLLNFSVRLDLFSLGVLGCPLNYALSVGGKGKGNDHLDMTFTVKLHHFAASMKTVRSGKKFVSLYVSCWYNVCKTEFDGNHGRIALDNLGIFGMRLNGEISSEEEEEEVMAKSEVSTTPFLGQKIVVGYALTAKKKKSFLQPNFISLARYNFYYLPMIFFLIIFIASKSLTFDEKADIELHISEMTDISDVMSVAQCDDPRAPFVTDTFRFLVNIPNWSKGIYFVNIDLNKPLSEQGPFDIVLHKLLGEEWREIIEVCKLHSLQPTFTLYL*