Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048463.01.T01 | XP_013465620.1 | 99.515 | 206 | 1 | 0 | 3 | 208 | 243 | 448 | 1.04E-145 | 423 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048463.01.T01 | Q9S9N4 | 87.379 | 206 | 23 | 2 | 3 | 208 | 240 | 442 | 2.70E-123 | 358 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048463.01.T01 | G7ZYX9 | 99.515 | 206 | 1 | 0 | 3 | 208 | 243 | 448 | 4.99e-146 | 423 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047944.01 | MsG0080048463.01 | 0.810188 | 1.305123e-50 | 7.815151e-48 |
MsG0080047957.01 | MsG0080048463.01 | 0.804966 | 1.675830e-49 | 8.759573e-47 |
MsG0080048065.01 | MsG0080048463.01 | 0.809064 | 2.275480e-50 | 1.322747e-47 |
MsG0080048404.01 | MsG0080048463.01 | 0.817007 | 4.121835e-52 | 2.966646e-49 |
MsG0080048462.01 | MsG0080048463.01 | 0.812964 | 3.252649e-51 | 2.096871e-48 |
MsG0080048463.01 | MsG0080048464.01 | 0.965369 | 1.626679e-124 | 1.024895e-118 |
MsG0080048463.01 | MsG0080048683.01 | 0.836114 | 1.131306e-56 | 1.411900e-53 |
MsG0080048463.01 | MsG0080048769.01 | 0.820616 | 6.244616e-53 | 4.965102e-50 |
MsG0080048463.01 | MsG0080048826.01 | 0.832006 | 1.209015e-55 | 1.334297e-52 |
MsG0080048463.01 | MsG0080048849.01 | 0.802302 | 5.984410e-49 | 2.921483e-46 |
MsG0080048463.01 | MsG0180000091.01 | 0.803645 | 3.158494e-49 | 1.595651e-46 |
MsG0080048463.01 | MsG0180000114.01 | 0.828104 | 1.082132e-54 | 1.065215e-51 |
MsG0080048463.01 | MsG0180000145.01 | 0.801324 | 9.499270e-49 | 4.523474e-46 |
MsG0080048463.01 | MsG0180000241.01 | 0.819778 | 9.712342e-53 | 7.545540e-50 |
MsG0080048463.01 | MsG0180000470.01 | 0.839235 | 1.788951e-57 | 2.455095e-54 |
MsG0080048463.01 | MsG0180000624.01 | 0.814940 | 1.192618e-51 | 8.111170e-49 |
MsG0080048463.01 | MsG0180000777.01 | 0.820991 | 5.119184e-53 | 4.113711e-50 |
MsG0080048463.01 | MsG0180000814.01 | 0.813166 | 2.937573e-51 | 1.904035e-48 |
MsG0080048463.01 | MsG0180000914.01 | 0.800422 | 1.451859e-48 | 6.757800e-46 |
MsG0080048463.01 | MsG0180001063.01 | 0.830320 | 3.138982e-55 | 3.295731e-52 |
MsG0080048463.01 | MsG0180001088.01 | 0.810578 | 1.075301e-50 | 6.505926e-48 |
MsG0080048463.01 | MsG0180002377.01 | 0.803417 | 3.520817e-49 | 1.768358e-46 |
MsG0080048463.01 | MsG0180003189.01 | 0.810944 | 8.960478e-51 | 5.475198e-48 |
MsG0080048463.01 | MsG0180003673.01 | 0.818184 | 2.238228e-52 | 1.663679e-49 |
MsG0080048463.01 | MsG0180003686.01 | 0.815988 | 6.970238e-52 | 4.878615e-49 |
MsG0080048463.01 | MsG0180003885.01 | 0.815022 | 1.143551e-51 | 7.795097e-49 |
MsG0080048463.01 | MsG0180004025.01 | 0.800119 | 1.673287e-48 | 7.728456e-46 |
MsG0080048463.01 | MsG0180004389.01 | 0.822077 | 2.872140e-53 | 2.379235e-50 |
MsG0080048463.01 | MsG0180004396.01 | 0.839679 | 1.371947e-57 | 1.908562e-54 |
MsG0080048463.01 | MsG0180004465.01 | 0.826155 | 3.168644e-54 | 2.947703e-51 |
MsG0080048463.01 | MsG0180004493.01 | 0.803996 | 2.670240e-49 | 1.361288e-46 |
MsG0080048463.01 | MsG0180004500.01 | 0.818468 | 1.929235e-52 | 1.445436e-49 |
MsG0080048463.01 | MsG0180004765.01 | 0.827751 | 1.315762e-54 | 1.281813e-51 |
MsG0080048463.01 | MsG0180005169.01 | 0.811617 | 6.402015e-51 | 3.981410e-48 |
MsG0080048463.01 | MsG0180005185.01 | 0.802709 | 4.933684e-49 | 2.433495e-46 |
MsG0080048463.01 | MsG0180005730.01 | 0.805899 | 1.068314e-49 | 5.719368e-47 |
MsG0080048463.01 | MsG0180005799.01 | 0.848112 | 7.542149e-60 | 1.369396e-56 |
MsG0080048463.01 | MsG0180005800.01 | 0.809487 | 1.846932e-50 | 1.085770e-47 |
MsG0080048463.01 | MsG0180005990.01 | 0.810883 | 9.237542e-51 | 5.635115e-48 |
MsG0080048463.01 | MsG0180006054.01 | 0.810595 | 1.065908e-50 | 6.452135e-48 |
MsG0080048463.01 | MsG0180006096.01 | 0.824561 | 7.552893e-54 | 6.714024e-51 |
MsG0080048463.01 | MsG0180006134.01 | 0.806506 | 7.958111e-50 | 4.326986e-47 |
MsG0080048463.01 | MsG0180006224.01 | 0.801695 | 7.976228e-49 | 3.833750e-46 |
MsG0080048463.01 | MsG0280006309.01 | 0.858785 | 6.491672e-63 | 1.676270e-59 |
MsG0080048463.01 | MsG0280006324.01 | 0.831930 | 1.262308e-55 | 1.390102e-52 |
MsG0080048463.01 | MsG0280006491.01 | 0.826939 | 2.060172e-54 | 1.960130e-51 |
MsG0080048463.01 | MsG0280006588.01 | 0.809812 | 1.572541e-50 | 9.325060e-48 |
MsG0080048463.01 | MsG0280006593.01 | 0.815948 | 7.116120e-52 | 4.975076e-49 |
MsG0080048463.01 | MsG0280006601.01 | 0.811488 | 6.828387e-51 | 4.232515e-48 |
MsG0080048463.01 | MsG0280006634.01 | 0.820527 | 6.542586e-53 | 5.189419e-50 |
MsG0080048463.01 | MsG0280006669.01 | 0.804034 | 2.622370e-49 | 1.338161e-46 |
MsG0080048463.01 | MsG0280006770.01 | 0.851360 | 9.336270e-61 | 1.885166e-57 |
MsG0080048463.01 | MsG0280006930.01 | 0.804493 | 2.103636e-49 | 1.086146e-46 |
MsG0080048463.01 | MsG0280007023.01 | 0.809424 | 1.905050e-50 | 1.118131e-47 |
MsG0080048463.01 | MsG0280007062.01 | 0.810144 | 1.333582e-50 | 7.976827e-48 |
MsG0080048463.01 | MsG0280007118.01 | 0.854111 | 1.530095e-61 | 3.381171e-58 |
MsG0080048463.01 | MsG0280007307.01 | 0.832810 | 7.644994e-56 | 8.639737e-53 |
MsG0080048463.01 | MsG0280007575.01 | 0.834353 | 3.148313e-56 | 3.726743e-53 |
MsG0080048463.01 | MsG0280007955.01 | 0.843846 | 1.089730e-58 | 1.727106e-55 |
MsG0080048463.01 | MsG0280008076.01 | 0.814712 | 1.339604e-51 | 9.055434e-49 |
MsG0080048463.01 | MsG0280008112.01 | 0.898329 | 5.902781e-77 | 6.943047e-73 |
MsG0080048463.01 | MsG0280008113.01 | 0.850655 | 1.475767e-60 | 2.911311e-57 |
MsG0080048463.01 | MsG0280008377.01 | 0.832815 | 7.620169e-56 | 8.613257e-53 |
MsG0080048463.01 | MsG0280008738.01 | 0.835502 | 1.616319e-56 | 1.980324e-53 |
MsG0080048463.01 | MsG0280008765.01 | 0.828836 | 7.203867e-55 | 7.242918e-52 |
MsG0080048463.01 | MsG0280008894.01 | 0.817645 | 2.962323e-52 | 2.169526e-49 |
MsG0080048463.01 | MsG0280008928.01 | 0.818010 | 2.450230e-52 | 1.812528e-49 |
MsG0080048463.01 | MsG0280009256.01 | 0.826823 | 2.195540e-54 | 2.081804e-51 |
MsG0080048463.01 | MsG0280009383.01 | 0.829978 | 3.802725e-55 | 3.953681e-52 |
MsG0080048463.01 | MsG0280009421.01 | 0.843602 | 1.266762e-58 | 1.992342e-55 |
MsG0080048463.01 | MsG0280010182.01 | 0.809929 | 1.483956e-50 | 8.826673e-48 |
MsG0080048463.01 | MsG0280010184.01 | 0.839968 | 1.153738e-57 | 1.619750e-54 |
MsG0080048463.01 | MsG0280010216.01 | 0.809826 | 1.561694e-50 | 9.264042e-48 |
MsG0080048463.01 | MsG0280010233.01 | 0.802099 | 6.587968e-49 | 3.199332e-46 |
MsG0080048463.01 | MsG0280010288.01 | 0.810848 | 9.396630e-51 | 5.726736e-48 |
MsG0080048463.01 | MsG0280010349.01 | 0.856435 | 3.223970e-62 | 7.694811e-59 |
MsG0080048463.01 | MsG0280010350.01 | 0.821399 | 4.122121e-53 | 3.349927e-50 |
MsG0080048463.01 | MsG0280010366.01 | 0.812442 | 4.230329e-51 | 2.690238e-48 |
MsG0080048463.01 | MsG0280010434.01 | 0.807896 | 4.039681e-50 | 2.276952e-47 |
MsG0080048463.01 | MsG0280010517.01 | 0.873421 | 1.489584e-67 | 6.460970e-64 |
MsG0080048463.01 | MsG0280010586.01 | 0.816655 | 4.945320e-52 | 3.525114e-49 |
MsG0080048463.01 | MsG0280010598.01 | 0.824571 | 7.509684e-54 | 6.677815e-51 |
MsG0080048463.01 | MsG0280010722.01 | 0.862306 | 5.563609e-64 | 1.621736e-60 |
MsG0080048463.01 | MsG0280010753.01 | 0.813323 | 2.712840e-51 | 1.766082e-48 |
MsG0080048463.01 | MsG0280010796.01 | 0.832713 | 8.077024e-56 | 9.102470e-53 |
MsG0080048463.01 | MsG0280010807.01 | 0.853341 | 2.547074e-61 | 5.485818e-58 |
MsG0080048463.01 | MsG0280010916.01 | 0.824941 | 6.145261e-54 | 5.522787e-51 |
MsG0080048463.01 | MsG0280011109.01 | 0.801172 | 1.020654e-48 | 4.841677e-46 |
MsG0080048463.01 | MsG0280011175.01 | 0.801566 | 8.475120e-49 | 4.060450e-46 |
MsG0080048463.01 | MsG0280011272.01 | -0.813699 | 2.243046e-51 | 1.475213e-48 |
MsG0080048463.01 | MsG0380011609.01 | 0.810149 | 1.330520e-50 | 7.959418e-48 |
MsG0080048463.01 | MsG0380011669.01 | 0.842564 | 2.394177e-58 | 3.644567e-55 |
MsG0080048463.01 | MsG0380012005.01 | 0.826653 | 2.410408e-54 | 2.274381e-51 |
MsG0080048463.01 | MsG0380013176.01 | 0.800140 | 1.656940e-48 | 7.657154e-46 |
MsG0080048463.01 | MsG0380014277.01 | 0.802893 | 4.518779e-49 | 2.239367e-46 |
MsG0080048463.01 | MsG0380014537.01 | 0.840043 | 1.102699e-57 | 1.551845e-54 |
MsG0080048463.01 | MsG0380014727.01 | 0.848121 | 7.499999e-60 | 1.362103e-56 |
MsG0080048463.01 | MsG0380014866.01 | 0.828495 | 8.711075e-55 | 8.673012e-52 |
MsG0080048463.01 | MsG0380014876.01 | 0.800788 | 1.222599e-48 | 5.743374e-46 |
MsG0080048463.01 | MsG0380014948.01 | 0.816320 | 5.878020e-52 | 4.151820e-49 |
MsG0080048463.01 | MsG0380015277.01 | 0.829909 | 3.953266e-55 | 4.102324e-52 |
MsG0080048463.01 | MsG0380015497.01 | 0.805489 | 1.302639e-49 | 6.900642e-47 |
MsG0080048463.01 | MsG0380015533.01 | 0.800392 | 1.472329e-48 | 6.847647e-46 |
MsG0080048463.01 | MsG0380015555.01 | 0.832409 | 9.610025e-56 | 1.073260e-52 |
MsG0080048463.01 | MsG0380015778.01 | 0.803285 | 3.749141e-49 | 1.876594e-46 |
MsG0080048463.01 | MsG0380015930.01 | 0.807001 | 6.256049e-50 | 3.445111e-47 |
MsG0080048463.01 | MsG0380016133.01 | 0.824619 | 7.315828e-54 | 6.514935e-51 |
MsG0080048463.01 | MsG0380016163.01 | 0.805312 | 1.418641e-49 | 7.481046e-47 |
MsG0080048463.01 | MsG0380016191.01 | -0.814046 | 1.880314e-51 | 1.248322e-48 |
MsG0080048463.01 | MsG0380016285.01 | 0.861698 | 8.546295e-64 | 2.438802e-60 |
MsG0080048463.01 | MsG0380016347.01 | -0.809061 | 2.278875e-50 | 1.324589e-47 |
MsG0080048463.01 | MsG0380016391.01 | 0.816151 | 6.411529e-52 | 4.507658e-49 |
MsG0080048463.01 | MsG0380016407.01 | 0.817696 | 2.884137e-52 | 2.115288e-49 |
MsG0080048463.01 | MsG0380016529.01 | 0.834111 | 3.620994e-56 | 4.255055e-53 |
MsG0080048463.01 | MsG0380016740.01 | 0.803109 | 4.077768e-49 | 2.031852e-46 |
MsG0080048463.01 | MsG0380016879.01 | 0.810818 | 9.541014e-51 | 5.809896e-48 |
MsG0080048463.01 | MsG0380017048.01 | 0.823928 | 1.063575e-53 | 9.285482e-51 |
MsG0080048463.01 | MsG0380017085.01 | 0.806069 | 9.838914e-50 | 5.290267e-47 |
MsG0080048463.01 | MsG0380017176.01 | 0.804727 | 1.879927e-49 | 9.766232e-47 |
MsG0080048463.01 | MsG0380017198.01 | 0.809518 | 1.818377e-50 | 1.069904e-47 |
MsG0080048463.01 | MsG0380017202.01 | 0.867282 | 1.534927e-65 | 5.329153e-62 |
MsG0080048463.01 | MsG0380017293.01 | 0.884873 | 1.321527e-71 | 8.867934e-68 |
MsG0080048463.01 | MsG0380017461.01 | 0.808764 | 2.638774e-50 | 1.521624e-47 |
MsG0080048463.01 | MsG0380017543.01 | 0.834058 | 3.733175e-56 | 4.379853e-53 |
MsG0080048463.01 | MsG0380017931.01 | 0.838472 | 2.818535e-57 | 3.779154e-54 |
MsG0080048463.01 | MsG0480018218.01 | 0.804910 | 1.722121e-49 | 8.988962e-47 |
MsG0080048463.01 | MsG0480018236.01 | 0.857975 | 1.131350e-62 | 2.843169e-59 |
MsG0080048463.01 | MsG0480018402.01 | 0.809221 | 2.105966e-50 | 1.229375e-47 |
MsG0080048463.01 | MsG0480018465.01 | 0.806147 | 9.473541e-50 | 5.103946e-47 |
MsG0080048463.01 | MsG0480018653.01 | 0.832586 | 8.687372e-56 | 9.753158e-53 |
MsG0080048463.01 | MsG0480018778.01 | 0.805770 | 1.136846e-49 | 6.066343e-47 |
MsG0080048463.01 | MsG0480018779.01 | 0.801342 | 9.420630e-49 | 4.488092e-46 |
MsG0080048463.01 | MsG0480018883.01 | 0.809094 | 2.242884e-50 | 1.304821e-47 |
MsG0080048463.01 | MsG0480018911.01 | 0.832577 | 8.733946e-56 | 9.802559e-53 |
MsG0080048463.01 | MsG0480018985.01 | 0.837977 | 3.779097e-57 | 4.991575e-54 |
MsG0080048463.01 | MsG0480019408.01 | 0.815024 | 1.142727e-51 | 7.789891e-49 |
MsG0080048463.01 | MsG0480019435.01 | 0.816039 | 6.792510e-52 | 4.760944e-49 |
MsG0080048463.01 | MsG0480019711.01 | 0.821078 | 4.888020e-53 | 3.937421e-50 |
MsG0080048463.01 | MsG0480020024.01 | 0.829744 | 4.336297e-55 | 4.478652e-52 |
MsG0080048463.01 | MsG0480020025.01 | 0.812702 | 3.711302e-51 | 2.376212e-48 |
MsG0080048463.01 | MsG0480020283.01 | 0.819221 | 1.301220e-52 | 9.952767e-50 |
MsG0080048463.01 | MsG0480020322.01 | 0.811807 | 5.819214e-51 | 3.637350e-48 |
MsG0080048463.01 | MsG0480020323.01 | 0.801288 | 9.664999e-49 | 4.598234e-46 |
MsG0080048463.01 | MsG0480020447.01 | 0.811187 | 7.936435e-51 | 4.880243e-48 |
MsG0080048463.01 | MsG0480020887.01 | 0.841476 | 4.643687e-58 | 6.831887e-55 |
MsG0080048463.01 | MsG0480020935.01 | -0.824020 | 1.012048e-53 | 8.857787e-51 |
MsG0080048463.01 | MsG0480021056.01 | 0.807662 | 4.530076e-50 | 2.537856e-47 |
MsG0080048463.01 | MsG0480021280.01 | 0.814927 | 1.200675e-51 | 8.162922e-49 |
MsG0080048463.01 | MsG0480021356.01 | 0.807862 | 4.107511e-50 | 2.313130e-47 |
MsG0080048463.01 | MsG0480021561.01 | 0.824533 | 7.667642e-54 | 6.810445e-51 |
MsG0080048463.01 | MsG0480021869.01 | 0.850427 | 1.710282e-60 | 3.349090e-57 |
MsG0080048463.01 | MsG0480021870.01 | 0.813317 | 2.721170e-51 | 1.771185e-48 |
MsG0080048463.01 | MsG0480021917.01 | 0.811662 | 6.258956e-51 | 3.897036e-48 |
MsG0080048463.01 | MsG0480021959.01 | 0.805433 | 1.338239e-49 | 7.079025e-47 |
MsG0080048463.01 | MsG0480022068.01 | 0.872373 | 3.343604e-67 | 1.395928e-63 |
MsG0080048463.01 | MsG0480022178.01 | 0.823599 | 1.269917e-53 | 1.098454e-50 |
MsG0080048463.01 | MsG0480022259.01 | 0.804758 | 1.852599e-49 | 9.631627e-47 |
MsG0080048463.01 | MsG0480022514.01 | 0.804938 | 1.698838e-49 | 8.873551e-47 |
MsG0080048463.01 | MsG0480022589.01 | 0.822588 | 2.186242e-53 | 1.837893e-50 |
MsG0080048463.01 | MsG0480022624.01 | 0.816209 | 6.223199e-52 | 4.382249e-49 |
MsG0080048463.01 | MsG0480023045.01 | 0.815241 | 1.022714e-51 | 7.012613e-49 |
MsG0080048463.01 | MsG0480023251.01 | 0.841046 | 6.023108e-58 | 8.742206e-55 |
MsG0080048463.01 | MsG0480023261.01 | 0.813437 | 2.561331e-51 | 1.672633e-48 |
MsG0080048463.01 | MsG0480023381.01 | 0.823320 | 1.476010e-53 | 1.266604e-50 |
MsG0080048463.01 | MsG0480023489.01 | 0.828963 | 6.712105e-55 | 6.773898e-52 |
MsG0080048463.01 | MsG0480023503.01 | 0.802321 | 5.931120e-49 | 2.896880e-46 |
MsG0080048463.01 | MsG0480023670.01 | 0.802971 | 4.355800e-49 | 2.162741e-46 |
MsG0080048463.01 | MsG0480023867.01 | 0.810301 | 1.233562e-50 | 7.408612e-48 |
MsG0080048463.01 | MsG0480023877.01 | 0.805952 | 1.041323e-49 | 5.582379e-47 |
MsG0080048463.01 | MsG0580024788.01 | 0.819375 | 1.200461e-52 | 9.220777e-50 |
MsG0080048463.01 | MsG0580024790.01 | -0.812168 | 4.854901e-51 | 3.064470e-48 |
MsG0080048463.01 | MsG0580024829.01 | 0.818434 | 1.964467e-52 | 1.470430e-49 |
MsG0080048463.01 | MsG0580024935.01 | 0.800132 | 1.663646e-48 | 7.686406e-46 |
MsG0080048463.01 | MsG0580024997.01 | 0.807535 | 4.821064e-50 | 2.691990e-47 |
MsG0080048463.01 | MsG0580025357.01 | -0.802458 | 5.557220e-49 | 2.723580e-46 |
MsG0080048463.01 | MsG0580025661.01 | 0.841756 | 3.918712e-58 | 5.814859e-55 |
MsG0080048463.01 | MsG0580025827.01 | 0.823484 | 1.351056e-53 | 1.164826e-50 |
MsG0080048463.01 | MsG0580025832.01 | 0.827810 | 1.273419e-54 | 1.242651e-51 |
MsG0080048463.01 | MsG0580025987.01 | 0.846927 | 1.596639e-59 | 2.791616e-56 |
MsG0080048463.01 | MsG0580026086.01 | 0.839948 | 1.167231e-57 | 1.637651e-54 |
MsG0080048463.01 | MsG0580026122.01 | 0.811095 | 8.308201e-51 | 5.096609e-48 |
MsG0080048463.01 | MsG0580026304.01 | 0.827307 | 1.682123e-54 | 1.617805e-51 |
MsG0080048463.01 | MsG0580026340.01 | 0.807583 | 4.709547e-50 | 2.632856e-47 |
MsG0080048463.01 | MsG0580026510.01 | 0.813114 | 3.014860e-51 | 1.951376e-48 |
MsG0080048463.01 | MsG0580027922.01 | 0.808773 | 2.626126e-50 | 1.514694e-47 |
MsG0080048463.01 | MsG0580027937.01 | 0.803235 | 3.840752e-49 | 1.919971e-46 |
MsG0080048463.01 | MsG0580028551.01 | 0.815137 | 1.078342e-51 | 7.373129e-49 |
MsG0080048463.01 | MsG0580028918.01 | 0.801720 | 7.881864e-49 | 3.790873e-46 |
MsG0080048463.01 | MsG0580029236.01 | 0.858047 | 1.077029e-62 | 2.712915e-59 |
MsG0080048463.01 | MsG0580029376.01 | 0.810021 | 1.417811e-50 | 8.453910e-48 |
MsG0080048463.01 | MsG0580029879.01 | 0.843509 | 1.341572e-58 | 2.103709e-55 |
MsG0080048463.01 | MsG0580029925.01 | 0.812081 | 5.072977e-51 | 3.194534e-48 |
MsG0080048463.01 | MsG0580030000.01 | 0.832432 | 9.486673e-56 | 1.060111e-52 |
MsG0080048463.01 | MsG0580030142.01 | 0.812326 | 4.485616e-51 | 2.843488e-48 |
MsG0080048463.01 | MsG0680030413.01 | 0.839330 | 1.690401e-57 | 2.326702e-54 |
MsG0080048463.01 | MsG0680030515.01 | 0.826123 | 3.223281e-54 | 2.995866e-51 |
MsG0080048463.01 | MsG0680030616.01 | 0.834524 | 2.851178e-56 | 3.392573e-53 |
MsG0080048463.01 | MsG0680030880.01 | 0.802222 | 6.216416e-49 | 3.028314e-46 |
MsG0080048463.01 | MsG0680030992.01 | 0.822484 | 2.310793e-53 | 1.936717e-50 |
MsG0080048463.01 | MsG0680031344.01 | 0.824298 | 8.707707e-54 | 7.681428e-51 |
MsG0080048463.01 | MsG0680031621.01 | 0.803146 | 4.006464e-49 | 1.998257e-46 |
MsG0080048463.01 | MsG0680031708.01 | 0.830821 | 2.366234e-55 | 2.521341e-52 |
MsG0080048463.01 | MsG0680031815.01 | 0.803914 | 2.776578e-49 | 1.412582e-46 |
MsG0080048463.01 | MsG0680032157.01 | 0.833337 | 5.651965e-56 | 6.489862e-53 |
MsG0080048463.01 | MsG0680032204.01 | 0.801273 | 9.733359e-49 | 4.629024e-46 |
MsG0080048463.01 | MsG0680032460.01 | -0.810201 | 1.296610e-50 | 7.766979e-48 |
MsG0080048463.01 | MsG0680032827.01 | 0.842257 | 2.888154e-58 | 4.354206e-55 |
MsG0080048463.01 | MsG0680033427.01 | 0.808761 | 2.641998e-50 | 1.523403e-47 |
MsG0080048463.01 | MsG0680033465.01 | 0.824100 | 9.693521e-54 | 8.503466e-51 |
MsG0080048463.01 | MsG0680034230.01 | 0.833918 | 4.046208e-56 | 4.727945e-53 |
MsG0080048463.01 | MsG0680034235.01 | 0.802986 | 4.324581e-49 | 2.148053e-46 |
MsG0080048463.01 | MsG0680035629.01 | 0.817440 | 3.294946e-52 | 2.399723e-49 |
MsG0080048463.01 | MsG0680035676.01 | 0.801278 | 9.709365e-49 | 4.618263e-46 |
MsG0080048463.01 | MsG0680035707.01 | 0.814935 | 1.195463e-51 | 8.129435e-49 |
MsG0080048463.01 | MsG0680035877.01 | 0.803677 | 3.109837e-49 | 1.572336e-46 |
MsG0080048463.01 | MsG0780035957.01 | 0.809098 | 2.238196e-50 | 1.302245e-47 |
MsG0080048463.01 | MsG0780036080.01 | 0.804929 | 1.706478e-49 | 8.911372e-47 |
MsG0080048463.01 | MsG0780036128.01 | 0.816013 | 6.880567e-52 | 4.819291e-49 |
MsG0080048463.01 | MsG0780036183.01 | 0.836821 | 7.474453e-57 | 9.528427e-54 |
MsG0080048463.01 | MsG0780036593.01 | 0.831084 | 2.039092e-55 | 2.189741e-52 |
MsG0080048463.01 | MsG0780036602.01 | 0.821718 | 3.479514e-53 | 2.853167e-50 |
MsG0080048463.01 | MsG0780036659.01 | 0.807997 | 3.844564e-50 | 2.172882e-47 |
MsG0080048463.01 | MsG0780036800.01 | 0.801589 | 8.385952e-49 | 4.019933e-46 |
MsG0080048463.01 | MsG0780036803.01 | 0.811852 | 5.689298e-51 | 3.560443e-48 |
MsG0080048463.01 | MsG0780037141.01 | 0.840914 | 6.526941e-58 | 9.435618e-55 |
MsG0080048463.01 | MsG0780037292.01 | 0.800660 | 1.298768e-48 | 6.081680e-46 |
MsG0080048463.01 | MsG0780037701.01 | 0.815977 | 7.010966e-52 | 4.905571e-49 |
MsG0080048463.01 | MsG0780038378.01 | 0.810284 | 1.244192e-50 | 7.469145e-48 |
MsG0080048463.01 | MsG0780038439.01 | 0.823635 | 1.245585e-53 | 1.078537e-50 |
MsG0080048463.01 | MsG0780038488.01 | 0.813808 | 2.122038e-51 | 1.399793e-48 |
MsG0080048463.01 | MsG0780039143.01 | 0.816564 | 5.182198e-52 | 3.684681e-49 |
MsG0080048463.01 | MsG0780039170.01 | 0.835167 | 1.964045e-56 | 2.382290e-53 |
MsG0080048463.01 | MsG0780039178.01 | 0.808859 | 2.517982e-50 | 1.455646e-47 |
MsG0080048463.01 | MsG0780039443.01 | 0.816775 | 4.648239e-52 | 3.324137e-49 |
MsG0080048463.01 | MsG0780039867.01 | -0.833048 | 6.671234e-56 | 7.594267e-53 |
MsG0080048463.01 | MsG0780040576.01 | -0.832224 | 1.067973e-55 | 1.186080e-52 |
MsG0080048463.01 | MsG0780040763.01 | 0.805684 | 1.185265e-49 | 6.310794e-47 |
MsG0080048463.01 | MsG0780040888.01 | 0.828339 | 9.500858e-55 | 9.415687e-52 |
MsG0080048463.01 | MsG0780041091.01 | 0.814716 | 1.336939e-51 | 9.038407e-49 |
MsG0080048463.01 | MsG0780041187.01 | 0.901772 | 1.909413e-78 | 2.619192e-74 |
MsG0080048463.01 | MsG0780041229.01 | 0.800100 | 1.688354e-48 | 7.794219e-46 |
MsG0080048463.01 | MsG0780041387.01 | 0.833306 | 5.753345e-56 | 6.599772e-53 |
MsG0080048463.01 | MsG0780041416.01 | 0.844188 | 8.827029e-59 | 1.414033e-55 |
MsG0080048463.01 | MsG0780041435.01 | 0.815216 | 1.035588e-51 | 7.095957e-49 |
MsG0080048463.01 | MsG0780041440.01 | 0.802042 | 6.767405e-49 | 3.281689e-46 |
MsG0080048463.01 | MsG0780041468.01 | 0.803881 | 2.820790e-49 | 1.433805e-46 |
MsG0080048463.01 | MsG0780041673.01 | 0.812406 | 4.308553e-51 | 2.737264e-48 |
MsG0080048463.01 | MsG0880041852.01 | 0.806418 | 8.307067e-50 | 4.506434e-47 |
MsG0080048463.01 | MsG0880041854.01 | 0.805106 | 1.566987e-49 | 8.219709e-47 |
MsG0080048463.01 | MsG0880041861.01 | 0.830975 | 2.168852e-55 | 2.321508e-52 |
MsG0080048463.01 | MsG0880041863.01 | 0.812162 | 4.870027e-51 | 3.073587e-48 |
MsG0080048463.01 | MsG0880041864.01 | 0.817697 | 2.883305e-52 | 2.114710e-49 |
MsG0080048463.01 | MsG0880042022.01 | 0.833696 | 4.598344e-56 | 5.336111e-53 |
MsG0080048463.01 | MsG0880042031.01 | 0.827571 | 1.453368e-54 | 1.408391e-51 |
MsG0080048463.01 | MsG0880042520.01 | 0.828850 | 7.148466e-55 | 7.190121e-52 |
MsG0080048463.01 | MsG0880042622.01 | 0.819611 | 1.060279e-52 | 8.198345e-50 |
MsG0080048463.01 | MsG0880042656.01 | 0.803362 | 3.614467e-49 | 1.812702e-46 |
MsG0080048463.01 | MsG0880042700.01 | 0.845492 | 3.926365e-59 | 6.554410e-56 |
MsG0080048463.01 | MsG0880043157.01 | 0.836734 | 7.865841e-57 | 1.000143e-53 |
MsG0080048463.01 | MsG0880043454.01 | 0.829366 | 5.358326e-55 | 5.473084e-52 |
MsG0080048463.01 | MsG0880043509.01 | 0.820106 | 8.172997e-53 | 6.408656e-50 |
MsG0080048463.01 | MsG0880043897.01 | 0.800183 | 1.624277e-48 | 7.514132e-46 |
MsG0080048463.01 | MsG0880044131.01 | 0.809813 | 1.571563e-50 | 9.319567e-48 |
MsG0080048463.01 | MsG0880044145.01 | 0.810639 | 1.042779e-50 | 6.319579e-48 |
MsG0080048463.01 | MsG0880044611.01 | -0.831996 | 1.215965e-55 | 1.341603e-52 |
MsG0080048463.01 | MsG0880044728.01 | 0.818065 | 2.380565e-52 | 1.763643e-49 |
MsG0080048463.01 | MsG0880045111.01 | 0.842929 | 1.914627e-58 | 2.947546e-55 |
MsG0080048463.01 | MsG0880045362.01 | 0.814691 | 1.354113e-51 | 9.148227e-49 |
MsG0080048463.01 | MsG0880045371.01 | 0.817854 | 2.657579e-52 | 1.957599e-49 |
MsG0080048463.01 | MsG0880045387.01 | 0.817573 | 3.075014e-52 | 2.247610e-49 |
MsG0080048463.01 | MsG0880045613.01 | 0.800696 | 1.276986e-48 | 5.984825e-46 |
MsG0080048463.01 | MsG0880045736.01 | 0.814855 | 1.245691e-51 | 8.452754e-49 |
MsG0080048463.01 | MsG0880045765.01 | 0.840577 | 7.997209e-58 | 1.144031e-54 |
MsG0080048463.01 | MsG0880045992.01 | 0.850165 | 2.025700e-60 | 3.932748e-57 |
MsG0080048463.01 | MsG0880046572.01 | 0.812463 | 4.186015e-51 | 2.663515e-48 |
MsG0080048463.01 | MsG0880046724.01 | 0.811471 | 6.886616e-51 | 4.266674e-48 |
MsG0080048463.01 | MsG0880046790.01 | 0.809030 | 2.314529e-50 | 1.344159e-47 |
MsG0080048463.01 | MsG0880046815.01 | 0.807233 | 5.587759e-50 | 3.095703e-47 |
MsG0080048463.01 | MsG0880047046.01 | 0.810033 | 1.409498e-50 | 8.407006e-48 |
MsG0080048463.01 | MsG0880047052.01 | 0.832453 | 9.372495e-56 | 1.048001e-52 |
MsG0080048463.01 | MsG0880047267.01 | 0.870948 | 9.914934e-67 | 3.928891e-63 |
MsG0080048463.01 | MsG0880047306.01 | 0.805464 | 1.318050e-49 | 6.978059e-47 |
MsG0080048463.01 | MsG0880047754.01 | 0.817063 | 4.004939e-52 | 2.886864e-49 |
MsG0080048463.01 | MsG0880047764.01 | 0.819415 | 1.175275e-52 | 9.038367e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048463.01.T01 | MTR_2g105270 | 99.515 | 206 | 1 | 0 | 3 | 208 | 243 | 448 | 1.27e-149 | 423 |
MsG0080048463.01.T01 | MTR_2g105270 | 99.231 | 130 | 1 | 0 | 3 | 132 | 243 | 372 | 2.39e-86 | 261 |
MsG0080048463.01.T01 | MTR_2g105270 | 98.261 | 115 | 2 | 0 | 3 | 117 | 243 | 357 | 5.08e-75 | 230 |
MsG0080048463.01.T01 | MTR_5g045590 | 51.174 | 213 | 88 | 3 | 3 | 207 | 200 | 404 | 2.19e-64 | 204 |
MsG0080048463.01.T01 | MTR_5g005240 | 42.060 | 233 | 105 | 7 | 3 | 206 | 212 | 443 | 1.79e-43 | 151 |
MsG0080048463.01.T01 | MTR_1g040495 | 41.919 | 198 | 81 | 5 | 3 | 197 | 193 | 359 | 6.02e-38 | 135 |
MsG0080048463.01.T01 | MTR_8g088670 | 40.291 | 206 | 98 | 7 | 3 | 206 | 238 | 420 | 1.26e-37 | 135 |
MsG0080048463.01.T01 | MTR_1g093370 | 46.753 | 154 | 78 | 2 | 57 | 206 | 13 | 166 | 4.13e-37 | 127 |
MsG0080048463.01.T01 | MTR_1g076220 | 51.538 | 130 | 62 | 1 | 78 | 206 | 99 | 228 | 2.45e-36 | 127 |
MsG0080048463.01.T01 | MTR_7g096170 | 50.360 | 139 | 65 | 4 | 62 | 198 | 146 | 282 | 3.60e-36 | 128 |
MsG0080048463.01.T01 | MTR_1g076210 | 50.370 | 135 | 62 | 2 | 75 | 206 | 256 | 388 | 4.29e-36 | 130 |
MsG0080048463.01.T01 | MTR_1g093280 | 50.370 | 135 | 62 | 2 | 75 | 206 | 256 | 388 | 4.29e-36 | 130 |
MsG0080048463.01.T01 | MTR_7g096170 | 50.360 | 139 | 65 | 4 | 62 | 198 | 243 | 379 | 1.89e-35 | 129 |
MsG0080048463.01.T01 | MTR_1g106065 | 37.557 | 221 | 116 | 8 | 3 | 205 | 202 | 418 | 3.72e-35 | 128 |
MsG0080048463.01.T01 | MTR_7g096170 | 52.033 | 123 | 56 | 3 | 62 | 183 | 243 | 363 | 7.84e-32 | 119 |
MsG0080048463.01.T01 | MTR_8g094880 | 35.266 | 207 | 106 | 5 | 3 | 207 | 243 | 423 | 2.48e-31 | 118 |
MsG0080048463.01.T01 | MTR_8g094905 | 35.266 | 207 | 106 | 5 | 3 | 207 | 243 | 423 | 2.48e-31 | 118 |
MsG0080048463.01.T01 | MTR_8g098970 | 71.154 | 52 | 15 | 0 | 1 | 52 | 1 | 52 | 6.83e-19 | 77.4 |
MsG0080048463.01.T01 | MTR_1g040455 | 45.349 | 86 | 42 | 2 | 111 | 193 | 1 | 84 | 1.42e-17 | 75.1 |
MsG0080048463.01.T01 | MTR_7g096170 | 63.636 | 55 | 17 | 1 | 80 | 131 | 256 | 310 | 4.74e-15 | 72.8 |
MsG0080048463.01.T01 | MTR_3g020210 | 80.556 | 36 | 7 | 0 | 25 | 60 | 51 | 86 | 2.30e-13 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048463.01.T01 | AT1G16010 | 87.379 | 206 | 23 | 2 | 3 | 208 | 240 | 442 | 2.75e-124 | 358 |
MsG0080048463.01.T01 | AT1G16010 | 87.379 | 206 | 23 | 2 | 3 | 208 | 240 | 442 | 2.75e-124 | 358 |
MsG0080048463.01.T01 | AT1G16010 | 87.379 | 206 | 23 | 2 | 3 | 208 | 240 | 442 | 2.75e-124 | 358 |
MsG0080048463.01.T01 | AT1G80900 | 82.039 | 206 | 35 | 1 | 3 | 208 | 240 | 443 | 3.25e-117 | 340 |
MsG0080048463.01.T01 | AT1G80900 | 82.039 | 206 | 35 | 1 | 3 | 208 | 240 | 443 | 3.25e-117 | 340 |
MsG0080048463.01.T01 | AT2G03620 | 54.762 | 210 | 89 | 5 | 3 | 208 | 214 | 421 | 6.37e-58 | 188 |
MsG0080048463.01.T01 | AT2G03620 | 54.762 | 210 | 89 | 5 | 3 | 208 | 214 | 421 | 6.37e-58 | 188 |
MsG0080048463.01.T01 | AT3G19640 | 41.126 | 231 | 104 | 6 | 3 | 206 | 258 | 483 | 2.01e-47 | 162 |
MsG0080048463.01.T01 | AT5G09690 | 45.411 | 207 | 87 | 5 | 3 | 206 | 201 | 384 | 4.08e-46 | 157 |
MsG0080048463.01.T01 | AT5G09690 | 45.411 | 207 | 87 | 5 | 3 | 206 | 212 | 395 | 5.42e-46 | 156 |
MsG0080048463.01.T01 | AT5G09690 | 48.370 | 184 | 69 | 5 | 3 | 183 | 212 | 372 | 5.72e-42 | 145 |
MsG0080048463.01.T01 | AT3G58970 | 37.981 | 208 | 104 | 6 | 3 | 206 | 248 | 434 | 6.94e-40 | 141 |
MsG0080048463.01.T01 | AT5G64560 | 48.872 | 133 | 67 | 1 | 75 | 206 | 260 | 392 | 6.93e-37 | 132 |
MsG0080048463.01.T01 | AT5G64560 | 60.215 | 93 | 37 | 0 | 75 | 167 | 260 | 352 | 4.97e-33 | 122 |
MsG0080048463.01.T01 | AT5G09690 | 50.704 | 142 | 49 | 3 | 3 | 144 | 201 | 321 | 9.94e-31 | 115 |
MsG0080048463.01.T01 | AT5G09690 | 51.408 | 142 | 42 | 4 | 3 | 141 | 201 | 318 | 1.80e-30 | 114 |
MsG0080048463.01.T01 | AT5G09690 | 51.079 | 139 | 47 | 3 | 3 | 141 | 201 | 318 | 1.81e-30 | 114 |
MsG0080048463.01.T01 | AT5G09690 | 51.079 | 139 | 47 | 3 | 3 | 141 | 212 | 329 | 1.88e-30 | 114 |
MsG0080048463.01.T01 | AT5G09690 | 51.408 | 142 | 42 | 4 | 3 | 141 | 212 | 329 | 1.94e-30 | 114 |
MsG0080048463.01.T01 | AT5G09690 | 51.408 | 142 | 42 | 4 | 3 | 141 | 212 | 329 | 1.94e-30 | 114 |
MsG0080048463.01.T01 | AT5G09690 | 36.232 | 207 | 91 | 5 | 3 | 206 | 201 | 369 | 1.73e-25 | 102 |
MsG0080048463.01.T01 | AT4G28580 | 32.057 | 209 | 104 | 6 | 3 | 206 | 232 | 407 | 4.84e-24 | 98.6 |
Find 63 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTAAAATATAAATTTAA+AGG | 0.145793 | contig326end:-29506 | MsG0080048463.01.T01:three_prime_UTR |
GGAGTGGTGGCAGGAATATT+TGG | 0.196891 | contig326end:-30251 | MsG0080048463.01.T01:CDS |
ATGTTGGTGTAGCTTCTTAT+AGG | 0.278819 | contig326end:+30099 | None:intergenic |
AGTGAGACTAAATTAATAAT+TGG | 0.292742 | contig326end:-29836 | MsG0080048463.01.T01:three_prime_UTR |
ACATTTGTGGTTGCAATCTT+TGG | 0.293975 | contig326end:-30272 | MsG0080048463.01.T01:CDS |
CGCAAACTCCTGTTATTATA+AGG | 0.306482 | contig326end:+30177 | None:intergenic |
CAGTGGGTCCTTATAATAAC+AGG | 0.314280 | contig326end:-30185 | MsG0080048463.01.T01:CDS |
GAGTGGTGGCAGGAATATTT+GGG | 0.321680 | contig326end:-30250 | MsG0080048463.01.T01:CDS |
GTCTTAATCATCTGGTTCTC+AGG | 0.323006 | contig326end:-30022 | MsG0080048463.01.T01:three_prime_UTR |
TGTTGGTGTAGCTTCTTATA+GGG | 0.330077 | contig326end:+30100 | None:intergenic |
GAACATGATTAAACAATTGC+AGG | 0.381962 | contig326end:-30076 | MsG0080048463.01.T01:three_prime_UTR |
GCAGATGGGACATCAAATAA+TGG | 0.395904 | contig326end:+30212 | None:intergenic |
GAAAAGGGACCCTGGTAATT+CGG | 0.411419 | contig326end:-29999 | MsG0080048463.01.T01:three_prime_UTR |
ACTCACAACTGCAACATTTG+TGG | 0.415751 | contig326end:-30285 | MsG0080048463.01.T01:CDS |
TCATCTGGTTCTCAGGGAAA+AGG | 0.419081 | contig326end:-30015 | MsG0080048463.01.T01:three_prime_UTR |
TATGGATGATGATGGTGATA+TGG | 0.419241 | contig326end:-30987 | MsG0080048463.01.T01:CDS |
AGATGAAATAGAGCAGCTTA+TGG | 0.421927 | contig326end:-31005 | MsG0080048463.01.T01:CDS |
TACTTGAAAATAATCAATCA+TGG | 0.439863 | contig326end:+29665 | None:intergenic |
AGCCTCCGAGAGTGAGAGTC+AGG | 0.448161 | contig326end:+30836 | None:intergenic |
AGATTTCATCAACATTCAAC+TGG | 0.455223 | contig326end:-30556 | MsG0080048463.01.T01:intron |
ATAAAATTCAAATGCAAAGA+TGG | 0.459499 | contig326end:-29946 | MsG0080048463.01.T01:three_prime_UTR |
GAGTCAGGTGGTGATGAAAC+AGG | 0.460932 | contig326end:+30851 | None:intergenic |
AGACTAAATTAATAATTGGT+TGG | 0.463489 | contig326end:-29832 | MsG0080048463.01.T01:three_prime_UTR |
CATCTGGTTCTCAGGGAAAA+GGG | 0.465282 | contig326end:-30014 | MsG0080048463.01.T01:three_prime_UTR |
GCAATCTTTGGAGTGGTGGC+AGG | 0.465654 | contig326end:-30260 | MsG0080048463.01.T01:CDS |
TTGTGAGTAAAAGCTCAAAC+TGG | 0.470435 | contig326end:+30300 | None:intergenic |
GCTAATATTGTGGATGTGTC+AGG | 0.487693 | contig326end:-31032 | None:intergenic |
ACATCATACTCCGAATTACC+AGG | 0.489346 | contig326end:+29989 | None:intergenic |
TATGGAGATCAGTCTATGGT+TGG | 0.502971 | contig326end:-30917 | MsG0080048463.01.T01:CDS |
GGTGATGAAACAGGAGAGAC+TGG | 0.503084 | contig326end:+30860 | None:intergenic |
GAGATGGATGCACCATCAAC+CGG | 0.513341 | contig326end:+30887 | None:intergenic |
TCTTAATCATCTGGTTCTCA+GGG | 0.513823 | contig326end:-30021 | MsG0080048463.01.T01:three_prime_UTR |
AGAAGAGCTTGAGCATTGCT+AGG | 0.517888 | contig326end:-30811 | MsG0080048463.01.T01:CDS |
CAATAGAACTTCACATGGCA+TGG | 0.518855 | contig326end:-29704 | MsG0080048463.01.T01:three_prime_UTR |
ATGTCCCATCTGCATTTCAG+TGG | 0.522155 | contig326end:-30202 | MsG0080048463.01.T01:CDS |
AATTGCAGGGTGGCATATGA+TGG | 0.531462 | contig326end:-30062 | MsG0080048463.01.T01:three_prime_UTR |
GTTGGATATAGACCGGTTGA+TGG | 0.535505 | contig326end:-30899 | MsG0080048463.01.T01:CDS |
GTCTATGGTTGGATATAGAC+CGG | 0.535718 | contig326end:-30906 | MsG0080048463.01.T01:CDS |
TGTGGTTCTTCAAGTACAGA+AGG | 0.542985 | contig326end:-30130 | MsG0080048463.01.T01:CDS |
TGTCCCATCTGCATTTCAGT+GGG | 0.554672 | contig326end:-30201 | MsG0080048463.01.T01:CDS |
CTTATAATAACAGGAGTTTG+CGG | 0.555411 | contig326end:-30176 | MsG0080048463.01.T01:CDS |
CACCACCTGACTCTCACTCT+CGG | 0.557224 | contig326end:-30841 | MsG0080048463.01.T01:CDS |
AGGAGAGACTGGAAGAGAGA+TGG | 0.565175 | contig326end:+30871 | None:intergenic |
GGAGTCGACACGAGAGCATG+AGG | 0.579329 | contig326end:-30790 | MsG0080048463.01.T01:CDS |
GGTTGCAATCTTTGGAGTGG+TGG | 0.579624 | contig326end:-30264 | MsG0080048463.01.T01:CDS |
TTGTTTAATCATGTTCATGT+TGG | 0.580705 | contig326end:+30083 | None:intergenic |
GTTGGTGTAGCTTCTTATAG+GGG | 0.584463 | contig326end:+30101 | None:intergenic |
AGGACCCACTGAAATGCAGA+TGG | 0.588506 | contig326end:+30197 | None:intergenic |
TACCGAGAAGAAAAGACGAA+TGG | 0.590299 | contig326end:-30951 | MsG0080048463.01.T01:CDS |
AACATGATTAAACAATTGCA+GGG | 0.598115 | contig326end:-30075 | MsG0080048463.01.T01:three_prime_UTR |
TGTGGTTGCAATCTTTGGAG+TGG | 0.599940 | contig326end:-30267 | MsG0080048463.01.T01:CDS |
ATTAAAACATACATTTCATG+CGG | 0.603700 | contig326end:+29749 | None:intergenic |
TTCTCAGGGAAAAGGGACCC+TGG | 0.618214 | contig326end:-30007 | MsG0080048463.01.T01:three_prime_UTR |
GAGCAGCTTATGGATGATGA+TGG | 0.627314 | contig326end:-30995 | MsG0080048463.01.T01:CDS |
CACTCTAAACAAGTTGACAT+CGG | 0.643907 | contig326end:-30693 | MsG0080048463.01.T01:intron |
CTCCGAGAGTGAGAGTCAGG+TGG | 0.667939 | contig326end:+30839 | None:intergenic |
TATTATTACAGGATAATGTG+CGG | 0.676578 | contig326end:-30334 | MsG0080048463.01.T01:intron |
GGACCCACTGAAATGCAGAT+GGG | 0.678111 | contig326end:+30198 | None:intergenic |
AGTTTCAATAGAACTTCACA+TGG | 0.681047 | contig326end:-29709 | MsG0080048463.01.T01:three_prime_UTR |
CATCATACTCCGAATTACCA+GGG | 0.694799 | contig326end:+29990 | None:intergenic |
CACCTGACTCTCACTCTCGG+AGG | 0.701741 | contig326end:-30838 | MsG0080048463.01.T01:CDS |
TGCTGAATCAGAATACCATG+AGG | 0.735224 | contig326end:+29869 | None:intergenic |
ATGATTAAACAATTGCAGGG+TGG | 0.751888 | contig326end:-30072 | MsG0080048463.01.T01:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAAATATATTATTTTTT+TGG | - | contig326end:30862-30881 | MsG0080048463.01.T01:CDS | 0.0% |
!!! | TATTTAAAATATAAATTTAA+AGG | - | contig326end:30999-31018 | MsG0080048463.01.T01:CDS | 0.0% |
!! | ATCTTGAAAGAAATAAAAAT+AGG | + | contig326end:30718-30737 | None:intergenic | 15.0% |
!!! | AATATATTATTTTTTTGGAG+AGG | - | contig326end:30867-30886 | MsG0080048463.01.T01:CDS | 15.0% |
!!! | ATGAAATGTATGTTTTAATA+AGG | - | contig326end:30760-30779 | MsG0080048463.01.T01:CDS | 15.0% |
!! | ACTAATAACCAAAATACAAT+AGG | + | contig326end:30022-30041 | None:intergenic | 20.0% |
!! | AGACTAAATTAATAATTGGT+TGG | - | contig326end:30673-30692 | MsG0080048463.01.T01:intron | 20.0% |
!! | AGTGAGACTAAATTAATAAT+TGG | - | contig326end:30669-30688 | MsG0080048463.01.T01:intron | 20.0% |
!! | ATAAAATTCAAATGCAAAGA+TGG | - | contig326end:30559-30578 | MsG0080048463.01.T01:CDS | 20.0% |
!! | ATTAAAACATACATTTCATG+CGG | + | contig326end:30759-30778 | None:intergenic | 20.0% |
!! | TACAATGTATGTATTATTAC+AGG | - | contig326end:30160-30179 | MsG0080048463.01.T01:CDS | 20.0% |
!! | TACTTGAAAATAATCAATCA+TGG | + | contig326end:30843-30862 | None:intergenic | 20.0% |
!!! | ATTCAATTTTGCATCAATTT+TGG | - | contig326end:30607-30626 | MsG0080048463.01.T01:intron | 20.0% |
!!! | TTTTAACTGAAACAAGAAAA+TGG | + | contig326end:29909-29928 | None:intergenic | 20.0% |
!!! | TTTTTTTTGTCTTAATCATC+TGG | - | contig326end:30475-30494 | MsG0080048463.01.T01:intron | 20.0% |
! | AAAATACAATAGGATAACCT+TGG | + | contig326end:30012-30031 | None:intergenic | 25.0% |
! | AACATGATTAAACAATTGCA+GGG | - | contig326end:30430-30449 | MsG0080048463.01.T01:intron | 25.0% |
! | AGTTAATATAGATAACAGTG+TGG | + | contig326end:29845-29864 | None:intergenic | 25.0% |
! | GTTAATATAGATAACAGTGT+GGG | + | contig326end:29844-29863 | None:intergenic | 25.0% |
! | TATTATTACAGGATAATGTG+CGG | - | contig326end:30171-30190 | MsG0080048463.01.T01:CDS | 25.0% |
! | TTGTTTAATCATGTTCATGT+TGG | + | contig326end:30425-30444 | None:intergenic | 25.0% |
!! | AAGGTTATCCTATTGTATTT+TGG | - | contig326end:30011-30030 | MsG0080048463.01.T01:three_prime_UTR | 25.0% |
AAACGGTGATAGATAAATTG+CGG | + | contig326end:29886-29905 | None:intergenic | 30.0% | |
AGATTTCATCAACATTCAAC+TGG | - | contig326end:29949-29968 | MsG0080048463.01.T01:three_prime_UTR | 30.0% | |
AGTTTCAATAGAACTTCACA+TGG | - | contig326end:30796-30815 | MsG0080048463.01.T01:CDS | 30.0% | |
CTGAAACAAGAAAATGGAAA+CGG | + | contig326end:29903-29922 | None:intergenic | 30.0% | |
CTTATAATAACAGGAGTTTG+CGG | - | contig326end:30329-30348 | MsG0080048463.01.T01:intron | 30.0% | |
GAACATGATTAAACAATTGC+AGG | - | contig326end:30429-30448 | MsG0080048463.01.T01:intron | 30.0% | |
! | ATTTTATGGAGATCAGTCTA+TGG | - | contig326end:29584-29603 | MsG0080048463.01.T01:three_prime_UTR | 30.0% |
! | GTATATTTTCTGCATTTGTG+TGG | - | contig326end:30357-30376 | MsG0080048463.01.T01:intron | 30.0% |
!!! | CAATTTTGGAATATTCCTCA+TGG | - | contig326end:30621-30640 | MsG0080048463.01.T01:intron | 30.0% |
!!! | CGAATGGAATTGTCATTTTA+TGG | - | contig326end:29570-29589 | MsG0080048463.01.T01:three_prime_UTR | 30.0% |
ACATTTGTGGTTGCAATCTT+TGG | - | contig326end:30233-30252 | MsG0080048463.01.T01:CDS | 35.0% | |
AGATGAAATAGAGCAGCTTA+TGG | - | contig326end:29500-29519 | MsG0080048463.01.T01:three_prime_UTR | 35.0% | |
ATGATTAAACAATTGCAGGG+TGG | - | contig326end:30433-30452 | MsG0080048463.01.T01:intron | 35.0% | |
ATGTTGGTGTAGCTTCTTAT+AGG | + | contig326end:30409-30428 | None:intergenic | 35.0% | |
CATACAGACAACGCATAATT+GGG | - | contig326end:30084-30103 | MsG0080048463.01.T01:three_prime_UTR | 35.0% | |
CGCAAACTCCTGTTATTATA+AGG | + | contig326end:30331-30350 | None:intergenic | 35.0% | |
CTTTCTCATATTAGTCACCA+AGG | - | contig326end:29992-30011 | MsG0080048463.01.T01:three_prime_UTR | 35.0% | |
GGTGACTAATATGAGAAAGA+AGG | + | contig326end:29991-30010 | None:intergenic | 35.0% | |
TAGATAAATTGCGGTGAAGT+TGG | + | contig326end:29877-29896 | None:intergenic | 35.0% | |
TCATACAGACAACGCATAAT+TGG | - | contig326end:30083-30102 | MsG0080048463.01.T01:three_prime_UTR | 35.0% | |
TGTTGGTGTAGCTTCTTATA+GGG | + | contig326end:30408-30427 | None:intergenic | 35.0% | |
TTGTGAGTAAAAGCTCAAAC+TGG | + | contig326end:30208-30227 | None:intergenic | 35.0% | |
! | CACTCTAAACAAGTTGACAT+CGG | - | contig326end:29812-29831 | MsG0080048463.01.T01:three_prime_UTR | 35.0% |
! | TTCCATTCGTCTTTTCTTCT+CGG | + | contig326end:29559-29578 | None:intergenic | 35.0% |
!! | GTTTTAATAAGGCTGAGACA+AGG | - | contig326end:30771-30790 | MsG0080048463.01.T01:CDS | 35.0% |
!! | TATGGATGATGATGGTGATA+TGG | - | contig326end:29518-29537 | MsG0080048463.01.T01:three_prime_UTR | 35.0% |
!! | TCTTAATCATCTGGTTCTCA+GGG | - | contig326end:30484-30503 | MsG0080048463.01.T01:intron | 35.0% |
ACATCATACTCCGAATTACC+AGG | + | contig326end:30519-30538 | None:intergenic | 40.0% | |
ACTCACAACTGCAACATTTG+TGG | - | contig326end:30220-30239 | MsG0080048463.01.T01:CDS | 40.0% | |
CAATAGAACTTCACATGGCA+TGG | - | contig326end:30801-30820 | MsG0080048463.01.T01:CDS | 40.0% | |
CAGTGGGTCCTTATAATAAC+AGG | - | contig326end:30320-30339 | MsG0080048463.01.T01:CDS | 40.0% | |
CATCATACTCCGAATTACCA+GGG | + | contig326end:30518-30537 | None:intergenic | 40.0% | |
GCAGATGGGACATCAAATAA+TGG | + | contig326end:30296-30315 | None:intergenic | 40.0% | |
GTCTATGGTTGGATATAGAC+CGG | - | contig326end:29599-29618 | MsG0080048463.01.T01:three_prime_UTR | 40.0% | |
GTTGGTGTAGCTTCTTATAG+GGG | + | contig326end:30407-30426 | None:intergenic | 40.0% | |
GTTGTCTGTATGAGTATGTG+TGG | + | contig326end:30076-30095 | None:intergenic | 40.0% | |
TACCGAGAAGAAAAGACGAA+TGG | - | contig326end:29554-29573 | MsG0080048463.01.T01:three_prime_UTR | 40.0% | |
TATGGAGATCAGTCTATGGT+TGG | - | contig326end:29588-29607 | MsG0080048463.01.T01:three_prime_UTR | 40.0% | |
TGCTGAATCAGAATACCATG+AGG | + | contig326end:30639-30658 | None:intergenic | 40.0% | |
TGTGGTTCTTCAAGTACAGA+AGG | - | contig326end:30375-30394 | MsG0080048463.01.T01:intron | 40.0% | |
! | TTCGTCTTTTCTTCTCGGTA+AGG | + | contig326end:29554-29573 | None:intergenic | 40.0% |
!! | GTCTTAATCATCTGGTTCTC+AGG | - | contig326end:30483-30502 | MsG0080048463.01.T01:intron | 40.0% |
AATTGCAGGGTGGCATATGA+TGG | - | contig326end:30443-30462 | MsG0080048463.01.T01:intron | 45.0% | |
ACAGACAACGCATAATTGGG+AGG | - | contig326end:30087-30106 | MsG0080048463.01.T01:three_prime_UTR | 45.0% | |
AGACAACGCATAATTGGGAG+GGG | - | contig326end:30089-30108 | MsG0080048463.01.T01:three_prime_UTR | 45.0% | |
ATGTCCCATCTGCATTTCAG+TGG | - | contig326end:30303-30322 | MsG0080048463.01.T01:CDS | 45.0% | |
CAGACAACGCATAATTGGGA+GGG | - | contig326end:30088-30107 | MsG0080048463.01.T01:three_prime_UTR | 45.0% | |
GAAAAGGGACCCTGGTAATT+CGG | - | contig326end:30506-30525 | MsG0080048463.01.T01:intron | 45.0% | |
GAGCAGCTTATGGATGATGA+TGG | - | contig326end:29510-29529 | MsG0080048463.01.T01:three_prime_UTR | 45.0% | |
GAGTGGTGGCAGGAATATTT+GGG | - | contig326end:30255-30274 | MsG0080048463.01.T01:CDS | 45.0% | |
GTTGGATATAGACCGGTTGA+TGG | - | contig326end:29606-29625 | MsG0080048463.01.T01:three_prime_UTR | 45.0% | |
TGTCCCATCTGCATTTCAGT+GGG | - | contig326end:30304-30323 | MsG0080048463.01.T01:CDS | 45.0% | |
! | AGAAGAGCTTGAGCATTGCT+AGG | - | contig326end:29694-29713 | MsG0080048463.01.T01:three_prime_UTR | 45.0% |
! | TGTGGTTGCAATCTTTGGAG+TGG | - | contig326end:30238-30257 | MsG0080048463.01.T01:CDS | 45.0% |
!! | CATCTGGTTCTCAGGGAAAA+GGG | - | contig326end:30491-30510 | MsG0080048463.01.T01:intron | 45.0% |
!! | TCATCTGGTTCTCAGGGAAA+AGG | - | contig326end:30490-30509 | MsG0080048463.01.T01:intron | 45.0% |
AACGCATAATTGGGAGGGGA+GGG | - | contig326end:30093-30112 | MsG0080048463.01.T01:three_prime_UTR | 50.0% | |
AGGACCCACTGAAATGCAGA+TGG | + | contig326end:30311-30330 | None:intergenic | 50.0% | |
AGGAGAGACTGGAAGAGAGA+TGG | + | contig326end:29637-29656 | None:intergenic | 50.0% | |
GAGATGGATGCACCATCAAC+CGG | + | contig326end:29621-29640 | None:intergenic | 50.0% | |
GGACCCACTGAAATGCAGAT+GGG | + | contig326end:30310-30329 | None:intergenic | 50.0% | |
GGAGTGGTGGCAGGAATATT+TGG | - | contig326end:30254-30273 | MsG0080048463.01.T01:CDS | 50.0% | |
GGTGATGAAACAGGAGAGAC+TGG | + | contig326end:29648-29667 | None:intergenic | 50.0% | |
! | GAGTCAGGTGGTGATGAAAC+AGG | + | contig326end:29657-29676 | None:intergenic | 50.0% |
!! | GGTTGCAATCTTTGGAGTGG+TGG | - | contig326end:30241-30260 | MsG0080048463.01.T01:CDS | 50.0% |
CAACGCATAATTGGGAGGGG+AGG | - | contig326end:30092-30111 | MsG0080048463.01.T01:three_prime_UTR | 55.0% | |
CACCACCTGACTCTCACTCT+CGG | - | contig326end:29664-29683 | MsG0080048463.01.T01:three_prime_UTR | 55.0% | |
TTCTCAGGGAAAAGGGACCC+TGG | - | contig326end:30498-30517 | MsG0080048463.01.T01:intron | 55.0% | |
!! | GCAATCTTTGGAGTGGTGGC+AGG | - | contig326end:30245-30264 | MsG0080048463.01.T01:CDS | 55.0% |
AGCCTCCGAGAGTGAGAGTC+AGG | + | contig326end:29672-29691 | None:intergenic | 60.0% | |
CACCTGACTCTCACTCTCGG+AGG | - | contig326end:29667-29686 | MsG0080048463.01.T01:three_prime_UTR | 60.0% | |
CTCCGAGAGTGAGAGTCAGG+TGG | + | contig326end:29669-29688 | None:intergenic | 60.0% | |
! | GGAGTCGACACGAGAGCATG+AGG | - | contig326end:29715-29734 | MsG0080048463.01.T01:three_prime_UTR | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
contig326end | gene | 29486 | 31041 | 29486 | ID=MsG0080048463.01;Name=MsG0080048463.01 |
contig326end | mRNA | 29486 | 31041 | 29486 | ID=MsG0080048463.01.T01;Parent=MsG0080048463.01;Name=MsG0080048463.01.T01;_AED=0.38;_eAED=0.38;_QI=0|1|0.66|1|1|1|3|629|208 |
contig326end | exon | 29486 | 30345 | 29486 | ID=MsG0080048463.01.T01:exon:25203;Parent=MsG0080048463.01.T01 |
contig326end | exon | 30557 | 30604 | 30557 | ID=MsG0080048463.01.T01:exon:25202;Parent=MsG0080048463.01.T01 |
contig326end | exon | 30694 | 31041 | 30694 | ID=MsG0080048463.01.T01:exon:25201;Parent=MsG0080048463.01.T01 |
contig326end | CDS | 30694 | 31041 | 30694 | ID=MsG0080048463.01.T01:cds;Parent=MsG0080048463.01.T01 |
contig326end | CDS | 30557 | 30604 | 30557 | ID=MsG0080048463.01.T01:cds;Parent=MsG0080048463.01.T01 |
contig326end | CDS | 30115 | 30345 | 30115 | ID=MsG0080048463.01.T01:cds;Parent=MsG0080048463.01.T01 |
contig326end | three_prime_UTR | 29486 | 30114 | 29486 | ID=MsG0080048463.01.T01:three_prime_utr;Parent=MsG0080048463.01.T01 |
Gene Sequence |
Protein sequence |