AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006347.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006347.01.T01 MTR_2g006820 98.367 245 4 0 98 342 14 258 1.45e-174 492
MsG0280006347.01.T01 MTR_5g093300 95.102 245 11 1 98 342 17 260 9.58e-168 475
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006347.01.T01 AT4G26910 60.406 197 70 2 151 342 75 268 1.26e-71 230
MsG0280006347.01.T01 AT4G26910 60.406 197 70 2 151 342 76 269 1.35e-71 230
MsG0280006347.01.T01 AT5G55070 66.837 196 64 1 148 342 74 269 1.42e-70 227
MsG0280006347.01.T01 AT5G55070 66.837 196 64 1 148 342 74 269 1.42e-70 227
MsG0280006347.01.T01 AT4G26910 62.428 173 57 2 175 342 1 170 1.45e-62 204

Find 95 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCAGCAACATTATTAA+TGG 0.156695 2:+717365 None:intergenic
AACTAGAGTTTCTTCCATTT+TGG 0.159254 2:-717108 MsG0280006347.01.T01:CDS
TTTGCTCGATGCCTCCTAAC+TGG 0.196915 2:+717625 None:intergenic
CCTCTGGCTCACTAGCCTTT+GGG 0.240397 2:+711059 None:intergenic
TCAACATAGCAAATGTGTTT+TGG 0.245902 2:+710791 None:intergenic
CTTTGTGGAGTAGGTGCTTT+AGG 0.247457 2:+710995 None:intergenic
CTATTCTTAGTGGGCTGGGC+TGG 0.256674 2:+717596 None:intergenic
TGGGAGCAGGGCCTGGTGAC+AGG 0.273429 2:-711532 MsG0280006347.01.T01:intron
TCCTCTGGCTCACTAGCCTT+TGG 0.280514 2:+711058 None:intergenic
AAAGGAACCACTAACCTTAT+AGG 0.311042 2:+713519 None:intergenic
GTTGTAGTAGTTTCAACTTT+AGG 0.318631 2:+711025 None:intergenic
TCTGTTTCAATTTGAGCAAT+TGG 0.327060 2:+711494 None:intergenic
CTAGCCTTTGGGGTTGGCTT+AGG 0.329683 2:+711070 None:intergenic
TATTCTTAGTGGGCTGGGCT+GGG 0.350811 2:+717597 None:intergenic
GGCTTAGGAGCAGGTTTCTC+AGG 0.366745 2:+711085 None:intergenic
GTGTTATATGACAGAAATTC+CGG 0.378793 2:+713671 None:intergenic
TATGACAAGGCTTCGGAAAC+GGG 0.382455 2:-710836 MsG0280006347.01.T01:CDS
ATTGACTATTCTTAGTGGGC+TGG 0.382805 2:+717591 None:intergenic
GGATTAGTTCAAAGCCTATA+AGG 0.387008 2:-713533 MsG0280006347.01.T01:intron
GGCTCAGTTGGAGAGCTTTG+TGG 0.393131 2:+710980 None:intergenic
TTACATATCAACTTCATTGA+AGG 0.400847 2:+710765 None:intergenic
CAGGAGGATGTGGGAATATC+CGG 0.408123 2:-713690 MsG0280006347.01.T01:CDS
TACTTCAGTTGTTGAAAATC+CGG 0.412989 2:-717139 MsG0280006347.01.T01:CDS
TCACTACTTATGGCCCAGTT+AGG 0.413106 2:-717639 MsG0280006347.01.T01:CDS
ACTCGTCTTTCTCTTTCCTT+AGG 0.413435 2:+710947 None:intergenic
CGTTTCCGAAGCCTTGTCAT+AGG 0.415332 2:+710838 None:intergenic
AGTAGGTGCTTTAGGCTTCT+CGG 0.417497 2:+711003 None:intergenic
TTTGGGGTTGGCTTAGGAGC+AGG 0.418588 2:+711076 None:intergenic
CTATGACAAGGCTTCGGAAA+CGG 0.424020 2:-710837 MsG0280006347.01.T01:CDS
GGCTCACTAGCCTTTGGGGT+TGG 0.425562 2:+711064 None:intergenic
GTTGGAGAGCTTTGTGGAGT+AGG 0.431456 2:+710986 None:intergenic
TTGACTATTCTTAGTGGGCT+GGG 0.433754 2:+717592 None:intergenic
TAGGACCGAGCAAAACTTGT+TGG 0.441898 2:-717683 MsG0280006347.01.T01:CDS
CTCTGGCTCACTAGCCTTTG+GGG 0.450388 2:+711060 None:intergenic
CTCACCATTATCCGAAGAAA+AGG 0.456162 2:+712522 None:intergenic
GCATTAAGCTCAGGAGGATG+TGG 0.470710 2:-713700 MsG0280006347.01.T01:CDS
GGAACGCTTCCATGTTTGAA+TGG 0.475116 2:+712543 None:intergenic
ATCACACCCGACTCAGGACT+TGG 0.476153 2:+711334 None:intergenic
TGCGTGACTTTAACTCATGC+TGG 0.478035 2:-717757 MsG0280006347.01.T01:CDS
AGGACCGAGCAAAACTTGTT+GGG 0.482094 2:-717682 MsG0280006347.01.T01:CDS
TGATGTTGTTGTCCCTCCAT+TGG 0.485369 2:-711692 MsG0280006347.01.T01:CDS
CCTCGATTGACTATTCTTAG+TGG 0.486380 2:+717586 None:intergenic
ACAAGATTGCAATCATTTCA+AGG 0.487407 2:-711150 MsG0280006347.01.T01:CDS
TTGCTCGATGCCTCCTAACT+GGG 0.492011 2:+717626 None:intergenic
TAACAGATTGCATTAAGCTC+AGG 0.493291 2:-713709 MsG0280006347.01.T01:intron
GGAGGAAGCTGTGGCTCAGT+TGG 0.493329 2:+710968 None:intergenic
AAATTCCCCAGTGTAAGTTA+AGG 0.495193 2:+717719 None:intergenic
ATGCGTGCCTTAACTTACAC+TGG 0.497089 2:-717726 MsG0280006347.01.T01:CDS
CGTCTTTCTCTTTCCTTAGG+AGG 0.498109 2:+710950 None:intergenic
TGCGACGGTATCCCCTTCAT+TGG 0.502959 2:+711180 None:intergenic
AAACTCTAGTTGTGCCGGAC+CGG 0.504383 2:+717120 None:intergenic
AGGTTCCTATGACAAGGCTT+CGG 0.505128 2:-710843 MsG0280006347.01.T01:CDS
CTCGATTGACTATTCTTAGT+GGG 0.517493 2:+717587 None:intergenic
TGAGCCACAGCTTCCTCCTA+AGG 0.520051 2:-710963 MsG0280006347.01.T01:CDS
TGATGTTCCAAGTCCTGAGT+CGG 0.522578 2:-711341 MsG0280006347.01.T01:CDS
GTGCAGCTTCTAGCCAATGA+AGG 0.523506 2:-711193 MsG0280006347.01.T01:intron
ACGGGTTGCTCAACGGTTGA+AGG 0.526760 2:-710818 MsG0280006347.01.T01:CDS
TTCTCAGGTGCATTCTCAGA+TGG 0.530694 2:+711100 None:intergenic
TTGGCTGAATCCATCGAGGA+TGG 0.531002 2:-711673 MsG0280006347.01.T01:CDS
TTCAGAATCACACCCGACTC+AGG 0.531391 2:+711328 None:intergenic
CTACTTATGGCCCAGTTAGG+AGG 0.534294 2:-717636 MsG0280006347.01.T01:CDS
GGAAGAAACTCTAGTTGTGC+CGG 0.537367 2:+717115 None:intergenic
TGCTCAAATTGAAACAGATA+AGG 0.537580 2:-711489 MsG0280006347.01.T01:intron
GGGAGCAGGGCCTGGTGACA+GGG 0.540015 2:-711531 MsG0280006347.01.T01:intron
TGCTAGAGTCCCATCCTCGA+TGG 0.542822 2:+711663 None:intergenic
TCCTCGATGGATTCAGCCAA+TGG 0.546717 2:+711676 None:intergenic
TGCGTGCCTTAACTTACACT+GGG 0.552026 2:-717725 MsG0280006347.01.T01:CDS
GAAGGGGATACCGTCGCACC+AGG 0.558257 2:-711175 MsG0280006347.01.T01:CDS
CAGATTGCATTAAGCTCAGG+AGG 0.559164 2:-713706 MsG0280006347.01.T01:CDS
CAGTTGTTGAAAATCCGGTC+CGG 0.559930 2:-717134 MsG0280006347.01.T01:CDS
GATGTTCCAAGTCCTGAGTC+GGG 0.559994 2:-711340 MsG0280006347.01.T01:CDS
CACTAAGAATAGTCAATCGA+GGG 0.562865 2:-717585 MsG0280006347.01.T01:CDS
TGCAGCTTCTAGCCAATGAA+GGG 0.566756 2:-711192 MsG0280006347.01.T01:intron
CTTTCCTTAGGAGGAAGCTG+TGG 0.571886 2:+710959 None:intergenic
TTCGGAAACGGGTTGCTCAA+CGG 0.579901 2:-710825 MsG0280006347.01.T01:CDS
CCCAAAGGCTAGTGAGCCAG+AGG 0.580189 2:-711059 MsG0280006347.01.T01:CDS
TGGCTGAATCCATCGAGGAT+GGG 0.587628 2:-711672 MsG0280006347.01.T01:CDS
CGATGGATTCAGCCAATGGA+GGG 0.590845 2:+711680 None:intergenic
CATTCTCAGATGGCGCAACG+TGG 0.597846 2:+711110 None:intergenic
TCAACATTAACCCTGTCACC+AGG 0.604669 2:+711521 None:intergenic
TGCTCCTAAGCCAACCCCAA+AGG 0.604971 2:-711074 MsG0280006347.01.T01:CDS
AATCTTGTTACCTGGTGCGA+CGG 0.611238 2:+711165 None:intergenic
CATTAAGCTCAGGAGGATGT+GGG 0.618120 2:-713699 MsG0280006347.01.T01:CDS
ACGCTTCCATGTTTGAATGG+AGG 0.618217 2:+712546 None:intergenic
TCGATGGATTCAGCCAATGG+AGG 0.624022 2:+711679 None:intergenic
AATTTCTGTCATATAACACC+TGG 0.627152 2:-713667 MsG0280006347.01.T01:intron
ATGATTGCAATCTTGTTACC+TGG 0.627818 2:+711157 None:intergenic
ATTCTCAGATGGCGCAACGT+GGG 0.629520 2:+711111 None:intergenic
TGAGTCGGGTGTGATTCTGA+AGG 0.643094 2:-711326 MsG0280006347.01.T01:intron
AAGAGGCCTCCATTCAAACA+TGG 0.650484 2:-712552 MsG0280006347.01.T01:CDS
CCACTAAGAATAGTCAATCG+AGG 0.652546 2:-717586 MsG0280006347.01.T01:CDS
GCAGCTTCTAGCCAATGAAG+GGG 0.691382 2:-711191 MsG0280006347.01.T01:intron
TCCATTGGCTGAATCCATCG+AGG 0.719719 2:-711677 MsG0280006347.01.T01:CDS
ACTAAGAATAGTCAATCGAG+GGG 0.723656 2:-717584 MsG0280006347.01.T01:intron
GCGTGCCTTAACTTACACTG+GGG 0.789237 2:-717724 MsG0280006347.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATTATCATTTATTAA+TGG - Chr2:712824-712843 MsG0280006347.01.T01:intron 10.0%
!! ATTCATAATATGAAATAAAA+GGG + Chr2:713851-713870 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG + Chr2:713852-713871 None:intergenic 10.0%
!!! AAAAATTATTTTTATTGGAA+TGG - Chr2:714542-714561 MsG0280006347.01.T01:intron 10.0%
!!! AATTTTAACTTTTATTAAAG+AGG - Chr2:716318-716337 MsG0280006347.01.T01:intron 10.0%
!!! TATTATTTTATTTGTGATAA+AGG - Chr2:716810-716829 MsG0280006347.01.T01:intron 10.0%
!!! TATTTAATTTATAAACATGT+TGG - Chr2:715070-715089 MsG0280006347.01.T01:intron 10.0%
!!! TTTAAAGTAACTTATAATTT+GGG - Chr2:712940-712959 MsG0280006347.01.T01:intron 10.0%
!!! TTTTAAAGTAACTTATAATT+TGG - Chr2:712939-712958 MsG0280006347.01.T01:intron 10.0%
!!! TTTTTTTTTTTGTTGATTTA+TGG - Chr2:711322-711341 MsG0280006347.01.T01:intron 10.0%
!! AAAATAATCTTGAACTATAT+AGG + Chr2:716076-716095 None:intergenic 15.0%
!! AAGATAAAATATTGTCAAAA+TGG - Chr2:712459-712478 MsG0280006347.01.T01:intron 15.0%
!! AGATAAATTAAAGAATTGAA+AGG - Chr2:712855-712874 MsG0280006347.01.T01:intron 15.0%
!! ATTGAAAAATCTATAATCAT+AGG + Chr2:714191-714210 None:intergenic 15.0%
!! ATTGTTAGAAAATGAAATAA+TGG - Chr2:715385-715404 MsG0280006347.01.T01:intron 15.0%
!! CAGACATTAAAATAAAAAAT+TGG + Chr2:717659-717678 None:intergenic 15.0%
!! CGTAATAATTTGAAAATATA+TGG - Chr2:715822-715841 MsG0280006347.01.T01:intron 15.0%
!! CTTTATAGTAATATTTAAGT+TGG - Chr2:715158-715177 MsG0280006347.01.T01:intron 15.0%
!! TATAAGATTAGAAGAAAAAT+CGG + Chr2:711090-711109 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG - Chr2:713933-713952 MsG0280006347.01.T01:intron 15.0%
!!! ATATTTTTTGTTTTGATGTA+TGG - Chr2:716982-717001 MsG0280006347.01.T01:intron 15.0%
!!! ATTACTAGAGTATTATTTTT+GGG - Chr2:711579-711598 MsG0280006347.01.T01:intron 15.0%
!!! CTAATACTTTAAAACTTTTA+TGG - Chr2:711780-711799 MsG0280006347.01.T01:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG + Chr2:713780-713799 None:intergenic 15.0%
!!! TATGATTATAGATTTTTCAA+TGG - Chr2:714190-714209 MsG0280006347.01.T01:intron 15.0%
!!! TATTTTTTGTTTTGATGTAT+GGG - Chr2:716983-717002 MsG0280006347.01.T01:intron 15.0%
!!! TTATTTCTTTTTGAATAGTA+TGG - Chr2:713908-713927 MsG0280006347.01.T01:intron 15.0%
!! AAAAAAAGGTTTACATCAAT+TGG + Chr2:714389-714408 None:intergenic 20.0%
!! AAAATAAATAAATGCTGCAT+TGG + Chr2:711935-711954 None:intergenic 20.0%
!! AAAATCGGTGTATAAAAAAT+AGG + Chr2:711075-711094 None:intergenic 20.0%
!! AAAATTGGTAAACATAATTC+AGG + Chr2:717644-717663 None:intergenic 20.0%
!! AAATAACATTAATGCTTCAT+TGG - Chr2:712914-712933 MsG0280006347.01.T01:intron 20.0%
!! AACAGTGTTAATGATAATTT+AGG + Chr2:717146-717165 None:intergenic 20.0%
!! AAGGAAAAAATATAAAACTC+TGG + Chr2:713302-713321 None:intergenic 20.0%
!! AAGGAAAGATACTAATAAAT+AGG - Chr2:712874-712893 MsG0280006347.01.T01:intron 20.0%
!! AATAACTTCAATTAAGTAAG+AGG + Chr2:714351-714370 None:intergenic 20.0%
!! ACATACAATTGACAAAAATA+TGG - Chr2:713619-713638 MsG0280006347.01.T01:intron 20.0%
!! ACTACACAATACAAATTTAT+TGG - Chr2:714456-714475 MsG0280006347.01.T01:intron 20.0%
!! AGGAAAAAATATAAAACTCT+GGG + Chr2:713301-713320 None:intergenic 20.0%
!! AGTGTATATGTTTAATATCA+CGG - Chr2:713332-713351 MsG0280006347.01.T01:intron 20.0%
!! ATAACTTCAATTAAGTAAGA+GGG + Chr2:714350-714369 None:intergenic 20.0%
!! ATAATATGAAATAAAAGGGA+TGG + Chr2:713847-713866 None:intergenic 20.0%
!! CTACACAATACAAATTTATT+GGG - Chr2:714457-714476 MsG0280006347.01.T01:intron 20.0%
!! GATAGCTTATTAAAATAACT+TGG + Chr2:712498-712517 None:intergenic 20.0%
!! TAAAAAAAAACACAATTACC+AGG + Chr2:714888-714907 None:intergenic 20.0%
!! TAACTTCTCACATATAATTT+GGG - Chr2:715733-715752 MsG0280006347.01.T01:intron 20.0%
!! TAATCATTTGAATGTAAGTT+TGG + Chr2:713408-713427 None:intergenic 20.0%
!! TTGAATGTTAAAATCACATT+TGG - Chr2:715222-715241 MsG0280006347.01.T01:intron 20.0%
!! TTGTACTAGTTGTATATAAT+TGG - Chr2:713800-713819 MsG0280006347.01.T01:intron 20.0%
!! TTTATCTTGTGTTATAGAAA+TGG + Chr2:712447-712466 None:intergenic 20.0%
!!! AAATGGAATTAATTTTGTAC+AGG - Chr2:712778-712797 MsG0280006347.01.T01:intron 20.0%
!!! AGAAAAGCTTTTAAATTTAG+TGG - Chr2:715580-715599 MsG0280006347.01.T01:intron 20.0%
!!! AGCAATAATTTTAGTATTCA+TGG + Chr2:717278-717297 None:intergenic 20.0%
!!! ATTAATTGTGTTGATTTCAA+TGG + Chr2:712057-712076 None:intergenic 20.0%
!!! ATTTTTTAATACTTTCACAC+GGG + Chr2:711666-711685 None:intergenic 20.0%
!!! CATTTTTTAATACTTTCACA+CGG + Chr2:711667-711686 None:intergenic 20.0%
!!! GAAATTTTGAGTAATGTTTA+AGG - Chr2:713878-713897 MsG0280006347.01.T01:intron 20.0%
!!! GATTACTAGAGTATTATTTT+TGG - Chr2:711578-711597 MsG0280006347.01.T01:intron 20.0%
!!! GCAATAATTTTAGTATTCAT+GGG + Chr2:717277-717296 None:intergenic 20.0%
!!! TATAGTAATATTTAAGTTGG+CGG - Chr2:715161-715180 MsG0280006347.01.T01:intron 20.0%
!!! TCAAGATTATTTTGTGTTTA+GGG - Chr2:716083-716102 MsG0280006347.01.T01:intron 20.0%
!!! TGTTTAGTATAACTTTTTTC+TGG - Chr2:716709-716728 MsG0280006347.01.T01:intron 20.0%
!!! TTCAAGATTATTTTGTGTTT+AGG - Chr2:716082-716101 MsG0280006347.01.T01:intron 20.0%
!!! TTTTAACATTCAAAGCTTAT+TGG + Chr2:715215-715234 None:intergenic 20.0%
!!! TTTTTTATATTGTTTGTGAC+TGG - Chr2:713013-713032 MsG0280006347.01.T01:intron 20.0%
! AAAAAACAAAATTCGTTAGC+TGG - Chr2:714912-714931 MsG0280006347.01.T01:intron 25.0%
! AAAACAACATAATTTAGGAG+AGG + Chr2:712736-712755 None:intergenic 25.0%
! AAACAAATATTAGCAATCAC+AGG + Chr2:716694-716713 None:intergenic 25.0%
! AAACAACATAATTTAGGAGA+GGG + Chr2:712735-712754 None:intergenic 25.0%
! AAACCATAAAAAGGATTTAG+AGG + Chr2:712206-712225 None:intergenic 25.0%
! AAATCCGAACTTTAAGTAAT+TGG - Chr2:713522-713541 MsG0280006347.01.T01:intron 25.0%
! AACAGAAAAATAACAGCAAT+AGG + Chr2:713277-713296 None:intergenic 25.0%
! AACTTCTCACATATAATTTG+GGG - Chr2:715734-715753 MsG0280006347.01.T01:intron 25.0%
! AATTAAAATCACATGATCAC+AGG + Chr2:712698-712717 None:intergenic 25.0%
! AATTTAGGAACAAAGAAAAC+TGG + Chr2:717131-717150 None:intergenic 25.0%
! ACTTCAATAACATGCATATA+TGG - Chr2:715254-715273 MsG0280006347.01.T01:intron 25.0%
! ATAAAGCCTATGACTAATAA+AGG + Chr2:715036-715055 None:intergenic 25.0%
! ATAAGTTGTTTATCCAAACA+TGG + Chr2:711812-711831 None:intergenic 25.0%
! GATTCTTATCTATCAAATAC+AGG + Chr2:712647-712666 None:intergenic 25.0%
! GGATGAAATTCAAGAAATAA+GGG + Chr2:711974-711993 None:intergenic 25.0%
! GGATTACTAAAATACACAAA+GGG + Chr2:714060-714079 None:intergenic 25.0%
! GGGTAGTTCATAAAAAAAAA+AGG + Chr2:714403-714422 None:intergenic 25.0%
! GTAACTTCTCACATATAATT+TGG - Chr2:715732-715751 MsG0280006347.01.T01:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - Chr2:712166-712185 MsG0280006347.01.T01:intron 25.0%
! TAAAATGTGTTTGTACAGTT+CGG + Chr2:716252-716271 None:intergenic 25.0%
! TCAATGGTTTGAAAAGAAAT+TGG - Chr2:714206-714225 MsG0280006347.01.T01:intron 25.0%
! TCATAAAAGTTTAGCAAGAT+TGG + Chr2:713490-713509 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG - Chr2:712005-712024 MsG0280006347.01.T01:intron 25.0%
! TCCTTATTAATTGTAGTTAG+TGG + Chr2:712009-712028 None:intergenic 25.0%
! TCTTCCAATTACTTAAAGTT+CGG + Chr2:713529-713548 None:intergenic 25.0%
! TGATTAGAGAAACCATAAAA+AGG + Chr2:712215-712234 None:intergenic 25.0%
! TGGATGAAATTCAAGAAATA+AGG + Chr2:711975-711994 None:intergenic 25.0%
! TGGATTACTAAAATACACAA+AGG + Chr2:714061-714080 None:intergenic 25.0%
! TGGTCAAAACAACATAATTT+AGG + Chr2:712741-712760 None:intergenic 25.0%
! TTAAAATCACATTTGGACTT+TGG - Chr2:715229-715248 MsG0280006347.01.T01:intron 25.0%
! TTACATATCAACTTCATTGA+AGG + Chr2:717772-717791 None:intergenic 25.0%
! TTACTTATTAGTCATTTCCT+TGG - Chr2:714771-714790 MsG0280006347.01.T01:intron 25.0%
! TTGATCAGCAACATTATTAA+TGG + Chr2:711172-711191 None:intergenic 25.0%
! TTTGCACACAAATTAAGAAA+TGG - Chr2:712761-712780 MsG0280006347.01.T01:intron 25.0%
!! AAATACCTCTTTTTCCAAAA+TGG + Chr2:711443-711462 None:intergenic 25.0%
!! AAATTAGCTGACATTTTCTT+TGG - Chr2:715643-715662 MsG0280006347.01.T01:intron 25.0%
!! AATTACACAAGTTCATTTTC+TGG - Chr2:716277-716296 MsG0280006347.01.T01:intron 25.0%
!! ATATGTCCTCATATTTTCAT+TGG - Chr2:714713-714732 MsG0280006347.01.T01:intron 25.0%
!! TATGCTCAAACAAATTTTGT+TGG - Chr2:715710-715729 MsG0280006347.01.T01:intron 25.0%
!! TCAGGTGTTTGAATTTTATT+TGG - Chr2:714260-714279 MsG0280006347.01.T01:intron 25.0%
!! TTGTTGTTGTTGTTGTATTA+AGG + Chr2:712085-712104 None:intergenic 25.0%
!!! AATTGTTTCTATGAAGGATT+TGG - Chr2:717089-717108 MsG0280006347.01.T01:intron 25.0%
!!! ATTACGAGAGTATTATTCTT+GGG - Chr2:713424-713443 MsG0280006347.01.T01:intron 25.0%
!!! CAGGTGTTTGAATTTTATTT+GGG - Chr2:714261-714280 MsG0280006347.01.T01:intron 25.0%
!!! CTGTTACTTGTTATTTTTAG+TGG - Chr2:716941-716960 MsG0280006347.01.T01:intron 25.0%
!!! GTTATTTTAATAAGCTATCC+TGG - Chr2:712499-712518 MsG0280006347.01.T01:intron 25.0%
!!! TAATTTTAGTATTCATGGGA+TGG + Chr2:717273-717292 None:intergenic 25.0%
!!! TGTGCAATTTTAATATGGTT+GGG - Chr2:713096-713115 MsG0280006347.01.T01:intron 25.0%
!!! TTGTGCAATTTTAATATGGT+TGG - Chr2:713095-713114 MsG0280006347.01.T01:intron 25.0%
!!! TTTCTTAATTTGTGTGCAAA+TGG + Chr2:712761-712780 None:intergenic 25.0%
!!! TTTTCAAGTTTCACTACTTA+TGG - Chr2:710885-710904 MsG0280006347.01.T01:intron 25.0%
AAGTGACAATAATTGTGAGA+CGG + Chr2:711867-711886 None:intergenic 30.0%
AATTTCTGTCATATAACACC+TGG - Chr2:714867-714886 MsG0280006347.01.T01:intron 30.0%
ACAAGATTGCAATCATTTCA+AGG - Chr2:717384-717403 MsG0280006347.01.T01:CDS 30.0%
AGAAAACTACTTGCAAATCA+TGG + Chr2:716187-716206 None:intergenic 30.0%
AGGGGAAGAAAATGAAAAAA+TGG - Chr2:715350-715369 MsG0280006347.01.T01:intron 30.0%
ATAAATAGGCAGAGTTATCA+TGG - Chr2:712888-712907 MsG0280006347.01.T01:intron 30.0%
ATACTCTATCATCATAACCA+TGG + Chr2:716359-716378 None:intergenic 30.0%
ATAGAAGAATGACAATCCTT+GGG - Chr2:716487-716506 MsG0280006347.01.T01:intron 30.0%
ATATACACTGCATCTTATGA+AGG + Chr2:713321-713340 None:intergenic 30.0%
ATTGCCACCAATTAATTAGT+TGG - Chr2:715869-715888 MsG0280006347.01.T01:intron 30.0%
CGTAAGTAATCAATCATGTT+TGG - Chr2:711225-711244 MsG0280006347.01.T01:intron 30.0%
CTAAACCAAACCATTTCTTT+CGG - Chr2:716147-716166 MsG0280006347.01.T01:intron 30.0%
CTCACAATATTAGTCGTTTA+AGG + Chr2:712389-712408 None:intergenic 30.0%
CTGTTCACCAACTAATTAAT+TGG + Chr2:715879-715898 None:intergenic 30.0%
GAAAAAGTTATAGATAGCGA+TGG - Chr2:714093-714112 MsG0280006347.01.T01:intron 30.0%
GAATTTATCATGTTTGTGAC+TGG - Chr2:714232-714251 MsG0280006347.01.T01:intron 30.0%
GGAATATTTCACAATATCCA+TGG - Chr2:716339-716358 MsG0280006347.01.T01:intron 30.0%
GTAGATCGAAATTGAATGAA+TGG + Chr2:711034-711053 None:intergenic 30.0%
GTGTTATATGACAGAAATTC+CGG + Chr2:714866-714885 None:intergenic 30.0%
GTTAGCTGGTACAAATTAAA+TGG - Chr2:714926-714945 MsG0280006347.01.T01:intron 30.0%
GTTGTAGTAGTTTCAACTTT+AGG + Chr2:717512-717531 None:intergenic 30.0%
TAATCATCTGCTTGTATGTT+TGG + Chr2:711563-711582 None:intergenic 30.0%
TACTATTTATAGGTCTGCTT+TGG + Chr2:713770-713789 None:intergenic 30.0%
TACTTCAGTTGTTGAAAATC+CGG - Chr2:711395-711414 MsG0280006347.01.T01:intron 30.0%
TATAGAAGAATGACAATCCT+TGG - Chr2:716486-716505 MsG0280006347.01.T01:intron 30.0%
TCTGTTTCAATTTGAGCAAT+TGG + Chr2:717043-717062 None:intergenic 30.0%
TGCTCAAATTGAAACAGATA+AGG - Chr2:717045-717064 MsG0280006347.01.T01:intron 30.0%
TGGTTATCTAATGTTTGGTT+TGG + Chr2:716212-716231 None:intergenic 30.0%
TTAATAATCGTGCACTAAGT+GGG - Chr2:712240-712259 MsG0280006347.01.T01:intron 30.0%
TTAGCAATCACAGGATAATT+CGG + Chr2:716685-716704 None:intergenic 30.0%
TTATTAGTCATTTCCTTGGT+GGG - Chr2:714775-714794 MsG0280006347.01.T01:intron 30.0%
TTCACCAACTAATTAATTGG+TGG + Chr2:715876-715895 None:intergenic 30.0%
TTTATTGGAATGGTTAGCAT+TGG - Chr2:714552-714571 MsG0280006347.01.T01:intron 30.0%
! AACTAGAGTTTCTTCCATTT+TGG - Chr2:711426-711445 MsG0280006347.01.T01:intron 30.0%
! AAGAAATAAGGGTGTAATAG+TGG + Chr2:711963-711982 None:intergenic 30.0%
! AGGTTTGGTTATCTAATGTT+TGG + Chr2:716217-716236 None:intergenic 30.0%
! ATGTATTCCATCAGAAGTAT+CGG - Chr2:711736-711755 MsG0280006347.01.T01:intron 30.0%
! CAACATAGCAAATGTGTTTT+GGG + Chr2:717745-717764 None:intergenic 30.0%
! GGTTATCTAATGTTTGGTTT+GGG + Chr2:716211-716230 None:intergenic 30.0%
! TAACTTATAATTTGGGACGT+AGG - Chr2:712947-712966 MsG0280006347.01.T01:intron 30.0%
! TCAACATAGCAAATGTGTTT+TGG + Chr2:717746-717765 None:intergenic 30.0%
! TGACCTCTAAATCCTTTTTA+TGG - Chr2:712200-712219 MsG0280006347.01.T01:intron 30.0%
! TGCTTAAATCTTATTTGTCC+CGG + Chr2:715190-715209 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - Chr2:714572-714591 MsG0280006347.01.T01:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + Chr2:714591-714572 None:intergenic 30.0%
! TTACTGTTTCTTATTGTCAG+TGG - Chr2:715913-715932 MsG0280006347.01.T01:intron 30.0%
!! AAGTTCATTTTCTGGTGTTA+TGG - Chr2:716285-716304 MsG0280006347.01.T01:intron 30.0%
!! ACATGCAATTGTTTCTATGA+AGG - Chr2:717083-717102 MsG0280006347.01.T01:intron 30.0%
!! GATTACGAGAGTATTATTCT+TGG - Chr2:713423-713442 MsG0280006347.01.T01:intron 30.0%
!! GCGATTGTGCAATTTTAATA+TGG - Chr2:713091-713110 MsG0280006347.01.T01:intron 30.0%
!! TAATTAGTTGGTGAACAGAA+TGG - Chr2:715881-715900 MsG0280006347.01.T01:intron 30.0%
!! TGGTTTTACAGTGTTAGTAA+GGG - Chr2:715600-715619 MsG0280006347.01.T01:intron 30.0%
!! TTCTTCCATTTTGGAAAAAG+AGG - Chr2:711435-711454 MsG0280006347.01.T01:intron 30.0%
!!! ACTTTTTCATACTGCTTACA+TGG + Chr2:714081-714100 None:intergenic 30.0%
AAAGGAACCACTAACCTTAT+AGG + Chr2:715018-715037 None:intergenic 35.0%
AAATTCCCCAGTGTAAGTTA+AGG + Chr2:710818-710837 None:intergenic 35.0%
AACTTCTTGTTCTGTGATTC+TGG - Chr2:712990-713009 MsG0280006347.01.T01:intron 35.0%
ACATACACTGCATATTCGTA+AGG + Chr2:711483-711502 None:intergenic 35.0%
ACTAAGAATAGTCAATCGAG+GGG - Chr2:710950-710969 MsG0280006347.01.T01:CDS 35.0%
AGGAAGAAAGAAAGGAAAGA+AGG + Chr2:710988-711007 None:intergenic 35.0%
AGGTTTGTGCACGATTATTA+AGG + Chr2:712369-712388 None:intergenic 35.0%
ATAATTTAGGAGAGGGATGA+GGG + Chr2:712728-712747 None:intergenic 35.0%
ATGATTGCAATCTTGTTACC+TGG + Chr2:717380-717399 None:intergenic 35.0%
CACTAAGAATAGTCAATCGA+GGG - Chr2:710949-710968 MsG0280006347.01.T01:CDS 35.0%
CACTTAGTGCACGATTATTA+AGG + Chr2:712241-712260 None:intergenic 35.0%
CAGAGATAAAACAGATTAGC+AGG + Chr2:714674-714693 None:intergenic 35.0%
CAGCAATCAAAAGAAAGAAC+AGG + Chr2:716778-716797 None:intergenic 35.0%
CATAGGAACCTTGAAAATGA+AGG + Chr2:717682-717701 None:intergenic 35.0%
CTCGATTGACTATTCTTAGT+GGG + Chr2:710950-710969 None:intergenic 35.0%
CTGACAGCAAAAAACATAGA+AGG + Chr2:715483-715502 None:intergenic 35.0%
CTTAATAATCGTGCACTAAG+TGG - Chr2:712239-712258 MsG0280006347.01.T01:intron 35.0%
CTTATTAGTCATTTCCTTGG+TGG - Chr2:714774-714793 MsG0280006347.01.T01:intron 35.0%
CTTCTGATGGAATACATGTT+TGG + Chr2:711733-711752 None:intergenic 35.0%
GAACGAATGAATTTAGTGGA+AGG + Chr2:711008-711027 None:intergenic 35.0%
GACTAATATTGTGAGACAGA+GGG - Chr2:712394-712413 MsG0280006347.01.T01:intron 35.0%
GAGAGAACGAATGAATTTAG+TGG + Chr2:711012-711031 None:intergenic 35.0%
GATAACCTTATTGCTATGCA+GGG - Chr2:715947-715966 MsG0280006347.01.T01:intron 35.0%
GTGGTTCCTTTATTAGTCAT+AGG - Chr2:715027-715046 MsG0280006347.01.T01:intron 35.0%
TAACAGATTGCATTAAGCTC+AGG - Chr2:714825-714844 MsG0280006347.01.T01:intron 35.0%
TAGAACACTATGGTATCGTT+TGG - Chr2:714582-714601 MsG0280006347.01.T01:intron 35.0%
TAGACTGTATGAGCAAATGT+AGG + Chr2:713208-713227 None:intergenic 35.0%
TCTGTGCCAATGAAAATATG+AGG + Chr2:714722-714741 None:intergenic 35.0%
TGAGGACATATACTCAATAG+AGG + Chr2:714704-714723 None:intergenic 35.0%
TGATAACCTTATTGCTATGC+AGG - Chr2:715946-715965 MsG0280006347.01.T01:intron 35.0%
TGCAATAATCTTGTTCTGTG+TGG - Chr2:713244-713263 MsG0280006347.01.T01:intron 35.0%
TGTATGTTTGATCTCACAGT+GGG - Chr2:711496-711515 MsG0280006347.01.T01:CDS 35.0%
TTAGTGGAAGGAAGAAAGAA+AGG + Chr2:710996-711015 None:intergenic 35.0%
TTCAAAGCCTATAAGGTTAG+TGG - Chr2:715008-715027 MsG0280006347.01.T01:intron 35.0%
TTGAACCGAAAGAAATGGTT+TGG + Chr2:716155-716174 None:intergenic 35.0%
TTTATGGTTGTGACCATGTT+TGG - Chr2:711796-711815 MsG0280006347.01.T01:intron 35.0%
! AACTTACACTGGGGAATTTT+CGG - Chr2:710819-710838 MsG0280006347.01.T01:CDS 35.0%
! AATGTCTGCCTTCATTTTCA+AGG - Chr2:717671-717690 MsG0280006347.01.T01:CDS 35.0%
! ACGTAGGTAGTAACTTCTTT+TGG - Chr2:712963-712982 MsG0280006347.01.T01:intron 35.0%
! AGTTAGTGGAGTACTTAAGT+TGG + Chr2:711995-712014 None:intergenic 35.0%
! ATGTAAGTTTGGTAACACAG+TGG + Chr2:713397-713416 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG + Chr2:712182-712201 None:intergenic 35.0%
! CTACTTGCAAATCATGGTTT+TGG + Chr2:716181-716200 None:intergenic 35.0%
! CTGCTAATCTGTTTTATCTC+TGG - Chr2:714672-714691 MsG0280006347.01.T01:intron 35.0%
! CTGGTGTTTGACTTCTATTT+GGG - Chr2:713042-713061 MsG0280006347.01.T01:intron 35.0%
! GAATTTTCGGAAGTTTGGTT+AGG - Chr2:710832-710851 MsG0280006347.01.T01:CDS 35.0%
! TAGCTGACATTTTCTTTGGA+AGG - Chr2:715647-715666 MsG0280006347.01.T01:intron 35.0%
! TCTGGTGTTTGACTTCTATT+TGG - Chr2:713041-713060 MsG0280006347.01.T01:intron 35.0%
! TGTAAGTTTGGTAACACAGT+GGG + Chr2:713396-713415 None:intergenic 35.0%
! TTAGCAAGAGTTTAGAGTCT+TGG - Chr2:716651-716670 MsG0280006347.01.T01:intron 35.0%
!! GGATTAGTTCAAAGCCTATA+AGG - Chr2:715001-715020 MsG0280006347.01.T01:intron 35.0%
!! GTGGTTTTACAGTGTTAGTA+AGG - Chr2:715599-715618 MsG0280006347.01.T01:intron 35.0%
!! TTTTCAAGGTTCCTATGACA+AGG - Chr2:717685-717704 MsG0280006347.01.T01:CDS 35.0%
!!! GTTTGGTTTTCCAGTTCTTT+TGG + Chr2:716113-716132 None:intergenic 35.0%
AAATATGGCATCCCTTTCTC+TGG - Chr2:713634-713653 MsG0280006347.01.T01:intron 40.0%
AAATCACATGATCACAGGAC+AGG + Chr2:712693-712712 None:intergenic 40.0%
AACTAGACGAACACATGAAG+GGG + Chr2:713553-713572 None:intergenic 40.0%
AAGTTGTAAAGAACCCACCA+AGG + Chr2:714791-714810 None:intergenic 40.0%
AATGACAATCCTTGGGAGTT+GGG - Chr2:716494-716513 MsG0280006347.01.T01:intron 40.0%
AATGTCCCTGCATAGCAATA+AGG + Chr2:715955-715974 None:intergenic 40.0%
AATTTCAACGTGGTAGGGTA+AGG - Chr2:714320-714339 MsG0280006347.01.T01:intron 40.0%
ACAACTAGACGAACACATGA+AGG + Chr2:713555-713574 None:intergenic 40.0%
ACTCGTCTTTCTCTTTCCTT+AGG + Chr2:717590-717609 None:intergenic 40.0%
AGGGATGGCAAAATCGAAAA+TGG + Chr2:713832-713851 None:intergenic 40.0%
CAACTAGACGAACACATGAA+GGG + Chr2:713554-713573 None:intergenic 40.0%
CATAATTTAGGAGAGGGATG+AGG + Chr2:712729-712748 None:intergenic 40.0%
CATTTCCGCATTGAAAACAG+AGG - Chr2:714033-714052 MsG0280006347.01.T01:intron 40.0%
CCACTAAGAATAGTCAATCG+AGG - Chr2:710948-710967 MsG0280006347.01.T01:intron 40.0%
CCTCGATTGACTATTCTTAG+TGG + Chr2:710951-710970 None:intergenic 40.0%
CGACTAATATTGTGAGACAG+AGG - Chr2:712393-712412 MsG0280006347.01.T01:intron 40.0%
CTAACCTAACAGGCTATTCA+GGG - Chr2:715331-715350 MsG0280006347.01.T01:intron 40.0%
CTCACCATTATCCGAAGAAA+AGG + Chr2:716015-716034 None:intergenic 40.0%
GACAATAATTGTGAGACGGA+GGG + Chr2:711863-711882 None:intergenic 40.0%
GGATTTAGAGGTCAATGAGT+TGG + Chr2:712194-712213 None:intergenic 40.0%
GGTAAGTTGCAATTTCATGC+AGG + Chr2:713469-713488 None:intergenic 40.0%
GGTTCTTGAACCGAAAGAAA+TGG + Chr2:716160-716179 None:intergenic 40.0%
GTGATTGTGCAATTTCAACG+TGG - Chr2:714310-714329 MsG0280006347.01.T01:intron 40.0%
GTGTATGTTTGATCTCACAG+TGG - Chr2:711495-711514 MsG0280006347.01.T01:CDS 40.0%
TAACCTAACAGGCTATTCAG+GGG - Chr2:715332-715351 MsG0280006347.01.T01:intron 40.0%
TAGATAGCGATGGAGCTATA+CGG - Chr2:714103-714122 MsG0280006347.01.T01:intron 40.0%
TAGCCTGTTAGGTTAGGAAA+CGG + Chr2:715327-715346 None:intergenic 40.0%
TGACAATAATTGTGAGACGG+AGG + Chr2:711864-711883 None:intergenic 40.0%
TGAGTTTGTCAGAATCACTG+TGG - Chr2:713355-713374 MsG0280006347.01.T01:intron 40.0%
TGGTTTAGTTAAGCGTGGTT+CGG + Chr2:716135-716154 None:intergenic 40.0%
TGTGCAATTTCAACGTGGTA+GGG - Chr2:714315-714334 MsG0280006347.01.T01:intron 40.0%
TTGTGCAATTTCAACGTGGT+AGG - Chr2:714314-714333 MsG0280006347.01.T01:intron 40.0%
! AGAATCTCAGCTTTATGCCA+TGG - Chr2:712661-712680 MsG0280006347.01.T01:intron 40.0%
! ATTGACTATTCTTAGTGGGC+TGG + Chr2:710946-710965 None:intergenic 40.0%
! CAGGGACATTTTTCATCAAG+AGG - Chr2:715965-715984 MsG0280006347.01.T01:intron 40.0%
! CGTTCCTTTTCTTCGGATAA+TGG - Chr2:716008-716027 MsG0280006347.01.T01:intron 40.0%
! CTGTTTTCAATGCGGAAATG+CGG + Chr2:714033-714052 None:intergenic 40.0%
! GTTTTCCTTACTGCTGTATC+AGG - Chr2:717163-717182 MsG0280006347.01.T01:CDS 40.0%
! TACAGTGTTAGTAAGGGCAT+TGG - Chr2:715606-715625 MsG0280006347.01.T01:intron 40.0%
! TAGTGTATTTCTATCCAGCG+TGG - Chr2:716463-716482 MsG0280006347.01.T01:intron 40.0%
! TGGTTGTTGTTGCATTGGAA+TGG - Chr2:714640-714659 MsG0280006347.01.T01:intron 40.0%
! TTAGGAGTTTTCTTCTCCTC+TGG + Chr2:717494-717513 None:intergenic 40.0%
! TTCTCCCAACAAGTTTTGCT+CGG + Chr2:710859-710878 None:intergenic 40.0%
!! ATATTTAAGTTGGCGGAAGC+CGG - Chr2:715168-715187 MsG0280006347.01.T01:intron 40.0%
!! GTTTGGTGTTGTTAGACGAA+GGG - Chr2:711242-711261 MsG0280006347.01.T01:intron 40.0%
!! TGGTTTGGTTTAGTTAAGCG+TGG + Chr2:716140-716159 None:intergenic 40.0%
!! TGTTTGGTGTTGTTAGACGA+AGG - Chr2:711241-711260 MsG0280006347.01.T01:intron 40.0%
!! TTGACTATTCTTAGTGGGCT+GGG + Chr2:710945-710964 None:intergenic 40.0%
!! TTTAGCACCGATACTTCTGA+TGG + Chr2:711746-711765 None:intergenic 40.0%
!!! ATGGAAGCGTTCCTTTTCTT+CGG - Chr2:716001-716020 MsG0280006347.01.T01:intron 40.0%
!!! TGTTTTGATGTATGGGAGCA+GGG - Chr2:716990-717009 MsG0280006347.01.T01:intron 40.0%
!!! TTGTTTTGATGTATGGGAGC+AGG - Chr2:716989-717008 MsG0280006347.01.T01:intron 40.0%
AAGAGGCCTCCATTCAAACA+TGG - Chr2:715982-716001 MsG0280006347.01.T01:intron 45.0%
AAGCTATCCTGGAGAGCTTA+TGG - Chr2:712510-712529 MsG0280006347.01.T01:intron 45.0%
AATCTTGTTACCTGGTGCGA+CGG + Chr2:717372-717391 None:intergenic 45.0%
ACGAAGGGTTGCTTCATCTT+CGG - Chr2:711257-711276 MsG0280006347.01.T01:intron 45.0%
ACGCTTCCATGTTTGAATGG+AGG + Chr2:715991-716010 None:intergenic 45.0%
AGCCTGTTAGGTTAGGAAAC+GGG + Chr2:715326-715345 None:intergenic 45.0%
AGGTTCCTATGACAAGGCTT+CGG - Chr2:717691-717710 MsG0280006347.01.T01:CDS 45.0%
AGTATTCATGGGATGGCTTG+TGG + Chr2:717266-717285 None:intergenic 45.0%
AGTGACCTGATACAGCAGTA+AGG + Chr2:717171-717190 None:intergenic 45.0%
ATGCGTGCCTTAACTTACAC+TGG - Chr2:710808-710827 MsG0280006347.01.T01:CDS 45.0%
ATTTGGGGAGCAACAGCAAT+AGG - Chr2:715749-715768 MsG0280006347.01.T01:intron 45.0%
CACAGGATAATTCGGTCCAA+TGG + Chr2:716677-716696 None:intergenic 45.0%
CAGATTGCATTAAGCTCAGG+AGG - Chr2:714828-714847 MsG0280006347.01.T01:intron 45.0%
CAGCGTCCTGCAATAGAAAA+AGG + Chr2:714982-715001 None:intergenic 45.0%
CAGTTGTTGAAAATCCGGTC+CGG - Chr2:711400-711419 MsG0280006347.01.T01:intron 45.0%
CATTAAGCTCAGGAGGATGT+GGG - Chr2:714835-714854 MsG0280006347.01.T01:intron 45.0%
CCACATTTGCTCATCAGACA+CGG - Chr2:714421-714440 MsG0280006347.01.T01:intron 45.0%
CCTAACCTAACAGGCTATTC+AGG - Chr2:715330-715349 MsG0280006347.01.T01:intron 45.0%
CCTGAATAGCCTGTTAGGTT+AGG + Chr2:715333-715352 None:intergenic 45.0%
CGCTATTGACACCAGAGAAA+GGG + Chr2:713648-713667 None:intergenic 45.0%
CGTCTTTCTCTTTCCTTAGG+AGG + Chr2:717587-717606 None:intergenic 45.0%
CGTGTCTGATGAGCAAATGT+GGG + Chr2:714423-714442 None:intergenic 45.0%
CTATGACAAGGCTTCGGAAA+CGG - Chr2:717697-717716 MsG0280006347.01.T01:CDS 45.0%
CTTAGTTCCATAAGCTCTCC+AGG + Chr2:712520-712539 None:intergenic 45.0%
CTTATCCCACTAAGTGGAGT+CGG + Chr2:714617-714636 None:intergenic 45.0%
CTTTGTGGAGTAGGTGCTTT+AGG + Chr2:717542-717561 None:intergenic 45.0%
GAATGACAATCCTTGGGAGT+TGG - Chr2:716493-716512 MsG0280006347.01.T01:intron 45.0%
GATCAATTACCCAACTCCCA+AGG + Chr2:716506-716525 None:intergenic 45.0%
GGAACGCTTCCATGTTTGAA+TGG + Chr2:715994-716013 None:intergenic 45.0%
GGAAGAAACTCTAGTTGTGC+CGG + Chr2:711422-711441 None:intergenic 45.0%
GTCATTCTTCTATACCACGC+TGG + Chr2:716480-716499 None:intergenic 45.0%
GTCCTGCAATAGAAAAAGGC+TGG + Chr2:714978-714997 None:intergenic 45.0%
GTTTGGTATCCAGCATGTGT+CGG + Chr2:711716-711735 None:intergenic 45.0%
TAGGACCGAGCAAAACTTGT+TGG - Chr2:710851-710870 MsG0280006347.01.T01:intron 45.0%
TATGACAAGGCTTCGGAAAC+GGG - Chr2:717698-717717 MsG0280006347.01.T01:CDS 45.0%
TCAACATTAACCCTGTCACC+AGG + Chr2:717016-717035 None:intergenic 45.0%
TCACTACTTATGGCCCAGTT+AGG - Chr2:710895-710914 MsG0280006347.01.T01:intron 45.0%
TCGATCTACGTTTCTCACTC+AGG - Chr2:711045-711064 MsG0280006347.01.T01:CDS 45.0%
TGATGTTCCAAGTCCTGAGT+CGG - Chr2:717193-717212 MsG0280006347.01.T01:intron 45.0%
TGATGTTGTTGTCCCTCCAT+TGG - Chr2:716842-716861 MsG0280006347.01.T01:intron 45.0%
TGCAGCTTCTAGCCAATGAA+GGG - Chr2:717342-717361 MsG0280006347.01.T01:intron 45.0%
TGCGTGACTTTAACTCATGC+TGG - Chr2:710777-710796 MsG0280006347.01.T01:CDS 45.0%
TGCGTGCCTTAACTTACACT+GGG - Chr2:710809-710828 MsG0280006347.01.T01:CDS 45.0%
TTAGGGCTGTCCAAAAGAAC+TGG - Chr2:716100-716119 MsG0280006347.01.T01:intron 45.0%
TTCCCGTTTCCTAACCTAAC+AGG - Chr2:715321-715340 MsG0280006347.01.T01:intron 45.0%
TTCTCAGGTGCATTCTCAGA+TGG + Chr2:717437-717456 None:intergenic 45.0%
! AGGACCGAGCAAAACTTGTT+GGG - Chr2:710852-710871 MsG0280006347.01.T01:intron 45.0%
! AGGCTTGGTTGTTGTTGCAT+TGG - Chr2:714635-714654 MsG0280006347.01.T01:intron 45.0%
! AGGGACCTCTGTTTTCAATG+CGG + Chr2:714041-714060 None:intergenic 45.0%
! AGTAGGTGCTTTAGGCTTCT+CGG + Chr2:717534-717553 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr2:712112-712131 MsG0280006347.01.T01:intron 45.0%
! CAGTTCGGTTGTTTCAGTTC+AGG + Chr2:716237-716256 None:intergenic 45.0%
! CCTTTCTCTGGTGTCAATAG+CGG - Chr2:713646-713665 MsG0280006347.01.T01:intron 45.0%
! CGGTTGTTTCAGTTCAGGTT+TGG + Chr2:716232-716251 None:intergenic 45.0%
! CTGGGGAATTTTCGGAAGTT+TGG - Chr2:710827-710846 MsG0280006347.01.T01:CDS 45.0%
! CTTTTTCTATTGCAGGACGC+TGG - Chr2:714980-714999 MsG0280006347.01.T01:intron 45.0%
! GACCAGCCTTTTTCTATTGC+AGG - Chr2:714973-714992 MsG0280006347.01.T01:intron 45.0%
! GAGTTTAGAGTCTTGGCCAT+TGG - Chr2:716658-716677 MsG0280006347.01.T01:intron 45.0%
! GTATTCATGGGATGGCTTGT+GGG + Chr2:717265-717284 None:intergenic 45.0%
! TATTCATGGGATGGCTTGTG+GGG + Chr2:717264-717283 None:intergenic 45.0%
! TCACAGTGGGTTTGTTTGTC+AGG - Chr2:711509-711528 MsG0280006347.01.T01:CDS 45.0%
! TGTTTGTGACTGGTTCACTC+AGG - Chr2:713023-713042 MsG0280006347.01.T01:intron 45.0%
! TGTTTGTGACTGGTTCACTC+TGG - Chr2:713023-713042 MsG0280006347.01.T01:intron 45.0%
! TTGGTGGCAATCACAGAGTA+AGG + Chr2:715860-715879 None:intergenic 45.0%
!! CAGAAGTATCGGTGCTAAAG+AGG - Chr2:711747-711766 MsG0280006347.01.T01:intron 45.0%
!! TAGTTAAGCGTGGTTCGGTT+TGG + Chr2:716130-716149 None:intergenic 45.0%
!! TATTTAAGTTGGCGGAAGCC+GGG - Chr2:715169-715188 MsG0280006347.01.T01:intron 45.0%
!!! AAATTATTATTTGTTAAATT+AGG - Chr2:711190-711209 MsG0280006347.01.T01:CDS 5.0%
!!! TCTAAAAAAATTATTTTTAT+TGG - Chr2:714537-714556 MsG0280006347.01.T01:intron 5.0%
AAACTCTAGTTGTGCCGGAC+CGG + Chr2:711417-711436 None:intergenic 50.0%
ACTCAATAATTGGCGCGGTG+CGG + Chr2:713997-714016 None:intergenic 50.0%
AGCGCGGCCAACTCAATAAT+TGG + Chr2:714007-714026 None:intergenic 50.0%
ATTCTCAGATGGCGCAACGT+GGG + Chr2:717426-717445 None:intergenic 50.0%
CACATTTGTCCGACACATGC+TGG - Chr2:711704-711723 MsG0280006347.01.T01:CDS 50.0%
CACCGCGCCAATTATTGAGT+TGG - Chr2:713997-714016 MsG0280006347.01.T01:intron 50.0%
CAGGAGGATGTGGGAATATC+CGG - Chr2:714844-714863 MsG0280006347.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr2:714620-714639 MsG0280006347.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr2:714639-714620 None:intergenic 50.0%
CCGCTATTGACACCAGAGAA+AGG + Chr2:713649-713668 None:intergenic 50.0%
CCGTGTCTGATGAGCAAATG+TGG + Chr2:714424-714443 None:intergenic 50.0%
CGACTCCACTTAGTGGGATA+AGG - Chr2:714615-714634 MsG0280006347.01.T01:intron 50.0%
CTACTTATGGCCCAGTTAGG+AGG - Chr2:710898-710917 MsG0280006347.01.T01:intron 50.0%
CTTCCCCTGAATAGCCTGTT+AGG + Chr2:715338-715357 None:intergenic 50.0%
CTTTCCTTAGGAGGAAGCTG+TGG + Chr2:717578-717597 None:intergenic 50.0%
GATGTTCCAAGTCCTGAGTC+GGG - Chr2:717194-717213 MsG0280006347.01.T01:intron 50.0%
GCAGCTTCTAGCCAATGAAG+GGG - Chr2:717343-717362 MsG0280006347.01.T01:intron 50.0%
GCATTAAGCTCAGGAGGATG+TGG - Chr2:714834-714853 MsG0280006347.01.T01:intron 50.0%
GCGTGCCTTAACTTACACTG+GGG - Chr2:710810-710829 MsG0280006347.01.T01:CDS 50.0%
GGCCAACTCAATAATTGGCG+CGG + Chr2:714002-714021 None:intergenic 50.0%
GTGCAGCTTCTAGCCAATGA+AGG - Chr2:717341-717360 MsG0280006347.01.T01:intron 50.0%
TGAGTCGGGTGTGATTCTGA+AGG - Chr2:717208-717227 MsG0280006347.01.T01:intron 50.0%
TGGCTGAATCCATCGAGGAT+GGG - Chr2:716862-716881 MsG0280006347.01.T01:intron 50.0%
TTCAGAATCACACCCGACTC+AGG + Chr2:717209-717228 None:intergenic 50.0%
TTGCTCGATGCCTCCTAACT+GGG + Chr2:710911-710930 None:intergenic 50.0%
TTGGCTGAATCCATCGAGGA+TGG - Chr2:716861-716880 MsG0280006347.01.T01:intron 50.0%
TTTGCTCGATGCCTCCTAAC+TGG + Chr2:710912-710931 None:intergenic 50.0%
! AATAGTCAATCGAGGGGTGC+TGG - Chr2:710956-710975 MsG0280006347.01.T01:CDS 50.0%
! AATCGTGCACTAAGTGGGCT+CGG - Chr2:712245-712264 MsG0280006347.01.T01:intron 50.0%
! AGACACACACAAAAGCGCAG+AGG + Chr2:715797-715816 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG - Chr2:714608-714627 MsG0280006347.01.T01:intron 50.0%
! ATTCATGGGATGGCTTGTGG+GGG + Chr2:717263-717282 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr2:712111-712130 MsG0280006347.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr2:712130-712111 None:intergenic 50.0%
! CGATGGATTCAGCCAATGGA+GGG + Chr2:716857-716876 None:intergenic 50.0%
! CGTTTCCGAAGCCTTGTCAT+AGG + Chr2:717699-717718 None:intergenic 50.0%
! CTTATCCCACTAAGTGGGCT+CGG - Chr2:712117-712136 MsG0280006347.01.T01:intron 50.0%
! GTTGGAGAGCTTTGTGGAGT+AGG + Chr2:717551-717570 None:intergenic 50.0%
! TCCATTGGCTGAATCCATCG+AGG - Chr2:716857-716876 MsG0280006347.01.T01:intron 50.0%
! TCCTCGATGGATTCAGCCAA+TGG + Chr2:716861-716880 None:intergenic 50.0%
! TCGATGGATTCAGCCAATGG+AGG + Chr2:716858-716877 None:intergenic 50.0%
! TGTAGCCGACTCCACTTAGT+GGG - Chr2:714609-714628 MsG0280006347.01.T01:intron 50.0%
!! ACTTTTGACACGCGTTGACG+CGG + Chr2:713738-713757 None:intergenic 50.0%
!! TATTCTTAGTGGGCTGGGCT+GGG + Chr2:710940-710959 None:intergenic 50.0%
!! TTCGGAAACGGGTTGCTCAA+CGG - Chr2:717709-717728 MsG0280006347.01.T01:CDS 50.0%
AAAATCAGGACCACCGCACC+AGG - Chr2:713700-713719 MsG0280006347.01.T01:CDS 55.0%
AAATCAGGACCACCGCACCA+GGG - Chr2:713701-713720 MsG0280006347.01.T01:CDS 55.0%
ATCACACCCGACTCAGGACT+TGG + Chr2:717203-717222 None:intergenic 55.0%
ATGTAGCCGAGCCCACTTAG+TGG + Chr2:712126-712145 None:intergenic 55.0%
CACAGGACAGGAGTCTACCA+TGG + Chr2:712681-712700 None:intergenic 55.0%
CATTCTCAGATGGCGCAACG+TGG + Chr2:717427-717446 None:intergenic 55.0%
CGAGCCCACTTAGTGGGATA+AGG + Chr2:712119-712138 None:intergenic 55.0%
CTCAATAATTGGCGCGGTGC+GGG + Chr2:713996-714015 None:intergenic 55.0%
GGCTCAGTTGGAGAGCTTTG+TGG + Chr2:717557-717576 None:intergenic 55.0%
GGCTTAGGAGCAGGTTTCTC+AGG + Chr2:717452-717471 None:intergenic 55.0%
TGAGCCACAGCTTCCTCCTA+AGG - Chr2:717571-717590 MsG0280006347.01.T01:intron 55.0%
TGCGACGGTATCCCCTTCAT+TGG + Chr2:717357-717376 None:intergenic 55.0%
TGCTAGAGTCCCATCCTCGA+TGG + Chr2:716874-716893 None:intergenic 55.0%
TGCTCCTAAGCCAACCCCAA+AGG - Chr2:717460-717479 MsG0280006347.01.T01:intron 55.0%
TGTAGCCGAGCCCACTTAGT+GGG + Chr2:712125-712144 None:intergenic 55.0%
! ACACACAAAAGCGCAGAGGC+AGG + Chr2:715793-715812 None:intergenic 55.0%
! ACGGGTTGCTCAACGGTTGA+AGG - Chr2:717716-717735 MsG0280006347.01.T01:CDS 55.0%
! ACTAAGTGGGCTCGGCTACA+TGG - Chr2:712125-712144 MsG0280006347.01.T01:intron 55.0%
!! CCTCTGGCTCACTAGCCTTT+GGG + Chr2:717478-717497 None:intergenic 55.0%
!! CTAGCCTTTGGGGTTGGCTT+AGG + Chr2:717467-717486 None:intergenic 55.0%
!! CTATTCTTAGTGGGCTGGGC+TGG + Chr2:710941-710960 None:intergenic 55.0%
!! CTCTGGCTCACTAGCCTTTG+GGG + Chr2:717477-717496 None:intergenic 55.0%
!! TCCTCTGGCTCACTAGCCTT+TGG + Chr2:717479-717498 None:intergenic 55.0%
!! TTTGGGGTTGGCTTAGGAGC+AGG + Chr2:717461-717480 None:intergenic 55.0%
CCCAAAGGCTAGTGAGCCAG+AGG - Chr2:717475-717494 MsG0280006347.01.T01:intron 60.0%
GGAGGAAGCTGTGGCTCAGT+TGG + Chr2:717569-717588 None:intergenic 60.0%
TGATGTATGGGAGCAGGGCC+TGG - Chr2:716995-717014 MsG0280006347.01.T01:intron 60.0%
! CGGGCGCTATTTCGGTAGTG+CGG + Chr2:713959-713978 None:intergenic 60.0%
!! GGCTCACTAGCCTTTGGGGT+TGG + Chr2:717473-717492 None:intergenic 60.0%
CTCCGCTCCGCTATAGCGGT+CGG + Chr2:713677-713696 None:intergenic 65.0%
GAAGGGGATACCGTCGCACC+AGG - Chr2:717359-717378 MsG0280006347.01.T01:CDS 65.0%
GCGGAGCGGAGCGGAAAATC+AGG - Chr2:713686-713705 MsG0280006347.01.T01:CDS 65.0%
TAATTGGCGCGGTGCGGGAG+CGG + Chr2:713991-714010 None:intergenic 65.0%
TCCGCTCCGCTCCGCTATAG+CGG + Chr2:713681-713700 None:intergenic 65.0%
! ACCGCTATAGCGGAGCGGAG+CGG - Chr2:713677-713696 MsG0280006347.01.T01:CDS 65.0%
!! GCGCGTAGCGGGCGCTATTT+CGG + Chr2:713967-713986 None:intergenic 65.0%
AATTGGCGCGGTGCGGGAGC+GGG + Chr2:713990-714009 None:intergenic 70.0%
CTCCGCTATAGCGGTCGGCG+TGG + Chr2:713672-713691 None:intergenic 70.0%
GGCCACGCCGACCGCTATAG+CGG - Chr2:713667-713686 MsG0280006347.01.T01:intron 70.0%
GGGAGCAGGGCCTGGTGACA+GGG - Chr2:717003-717022 MsG0280006347.01.T01:intron 70.0%
TGCGGAAATGCGGCGCAGCG+CGG + Chr2:714023-714042 None:intergenic 70.0%
TGGGAGCAGGGCCTGGTGAC+AGG - Chr2:717002-717021 MsG0280006347.01.T01:intron 70.0%
! CGCCGACCGCTATAGCGGAG+CGG - Chr2:713672-713691 MsG0280006347.01.T01:CDS 70.0%
ACCGCACCAGGGCGCGTCTC+AGG - Chr2:713712-713731 MsG0280006347.01.T01:intron 75.0%
ATTGGCGCGGTGCGGGAGCG+GGG + Chr2:713989-714008 None:intergenic 75.0%
GCCTGAGACGCGCCCTGGTG+CGG + Chr2:713716-713735 None:intergenic 75.0%
TGAGACGCGCCCTGGTGCGG+TGG + Chr2:713713-713732 None:intergenic 75.0%
! ACGCGGCCTGAGACGCGCCC+TGG + Chr2:713721-713740 None:intergenic 80.0%
! TGCGGGAGCGGGGCGCGTAG+CGG + Chr2:713979-713998 None:intergenic 80.0%
! GCGGGAGCGGGGCGCGTAGC+GGG + Chr2:713978-713997 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr2 gene 710765 717791 710765 ID=MsG0280006347.01;Name=MsG0280006347.01
Chr2 mRNA 710765 717791 710765 ID=MsG0280006347.01.T01;Parent=MsG0280006347.01;Name=MsG0280006347.01.T01;_AED=0.52;_eAED=0.61;_QI=0|0.8|0.63|1|0.7|0.81|11|0|342
Chr2 exon 717585 717791 717585 ID=MsG0280006347.01.T01:exon:833;Parent=MsG0280006347.01.T01
Chr2 exon 717355 717403 717355 ID=MsG0280006347.01.T01:exon:832;Parent=MsG0280006347.01.T01
Chr2 exon 717100 717188 717100 ID=MsG0280006347.01.T01:exon:831;Parent=MsG0280006347.01.T01
Chr2 exon 713668 713725 713668 ID=MsG0280006347.01.T01:exon:830;Parent=MsG0280006347.01.T01
Chr2 exon 713534 713561 713534 ID=MsG0280006347.01.T01:exon:829;Parent=MsG0280006347.01.T01
Chr2 exon 712527 712588 712527 ID=MsG0280006347.01.T01:exon:828;Parent=MsG0280006347.01.T01
Chr2 exon 711650 711724 711650 ID=MsG0280006347.01.T01:exon:827;Parent=MsG0280006347.01.T01
Chr2 exon 711490 711545 711490 ID=MsG0280006347.01.T01:exon:826;Parent=MsG0280006347.01.T01
Chr2 exon 711327 711371 711327 ID=MsG0280006347.01.T01:exon:825;Parent=MsG0280006347.01.T01
Chr2 exon 710949 711209 710949 ID=MsG0280006347.01.T01:exon:824;Parent=MsG0280006347.01.T01
Chr2 exon 710765 710863 710765 ID=MsG0280006347.01.T01:exon:823;Parent=MsG0280006347.01.T01
Chr2 CDS 717585 717791 717585 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 717355 717403 717355 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 717100 717188 717100 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 713668 713725 713668 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 713534 713561 713534 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 712527 712588 712527 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 711650 711724 711650 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 711490 711545 711490 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 711327 711371 711327 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 710949 711209 710949 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Chr2 CDS 710765 710863 710765 ID=MsG0280006347.01.T01:cds;Parent=MsG0280006347.01.T01
Gene Sequence

>MsG0280006347.01.T01

ATGTTTAACACATGCGTGACTTTAACTCATGCTGGTTTAACACATGCGTGCCTTAACTTACACTGGGGAATTTTCGGAAGTTTGGTTAGGACCGAGCAAAACTTGTTGGGAGAAGAGCATTTTTCAAGTTTCACTACTTATGGCCCAGTTAGGAGGCATCGAGCAAACAAAGCCCAGCCCAGCCCACTAAGAATAGTCAATCGAGGGAATCGATTGATTTATTCCATTAATAATGTTGCTGATCAAATTATTATTTTGAAAGCTGATACTTTTCTTGTATATATACTTCAGTTGTTGAAAATCCGGTCCGGCACAACTAGAGTTTCTTCCATTTTGGAAAAAGAGATTGCATTAAGCTCAGGAGGATGTGGGAATATCCGGAATTTCTGTCATATAACACCTGGACGCTGGATTAGTTCAAAGCCTATAAGGGACATTTTTCATCAAGAGGCCTCCATTCAAACATGGAAGCGTTCCTTTTCTTCGGATAATGGAGACAATGTTGATGTTGTTGTCCCTCCATTGGCTGAATCCATCGAGGATGGGACTCTAGCAAAATTTCTGAAGAGGCCTGGTGACAGGGTTAATGTTGATGAACCAATTGCTCAAATTGAAACAGATAAGGTCACTATTGATGTTCCAAGTCCTGAGTCGGGTGTGATTCTGAAGCTTCTAGCCAATGAAGGGGATACCGTCGCACCAGGTAACAAGATTGCAATCATTTCAAGGTCTGCTGATGCTACAACCCACGTTGCGCCATCTGAGAATGCACCTGAGAAACCTGCTCCTAAGCCAACCCCAAAGGCTAGTGAGCCAGAGGAGAAGAAAACTCCTAAAGTTGAAACTACTACAACCGAGAAGCCTAAAGCACCTACTCCACAAAGCTCTCCAACTGAGCCACAGCTTCCTCCTAAGGAAAGAGAAAGACGAGTTCCTATGACAAGGCTTCGGAAACGGGTTGCTCAACGGTTGAAGGATTCCCAAAACACATTTGCTATGTTGACAACCTTCAATGAAGTTGATATGTAA
Protein sequence

>MsG0280006347.01.T01

MFNTCVTLTHAGLTHACLNLHWGIFGSLVRTEQNLLGEEHFSSFTTYGPVRRHRANKAQPSPLRIVNRGNRLIYSINNVADQIIILKADTFLVYILQLLKIRSGTTRVSSILEKEIALSSGGCGNIRNFCHITPGRWISSKPIRDIFHQEASIQTWKRSFSSDNGDNVDVVVPPLAESIEDGTLAKFLKRPGDRVNVDEPIAQIETDKVTIDVPSPESGVILKLLANEGDTVAPGNKIAIISRSADATTHVAPSENAPEKPAPKPTPKASEPEEKKTPKVETTTTEKPKAPTPQSSPTEPQLPPKERERRVPMTRLRKRVAQRLKDSQNTFAMLTTFNEVDM*