AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006618.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006618.01.T01 MTR_2g011820 89.199 537 5 3 1 537 1 484 0.0 959
MsG0280006618.01.T01 MTR_6g004070 33.971 209 108 9 106 310 268 450 6.98e-16 81.3
MsG0280006618.01.T01 MTR_6g004070 33.971 209 108 9 106 310 268 450 8.10e-16 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006618.01.T01 AT4G21540 58.271 532 158 6 5 536 17 484 0.0 615
MsG0280006618.01.T01 AT4G21534 54.442 529 173 8 10 536 17 479 0.0 569
MsG0280006618.01.T01 AT4G21534 54.442 529 173 8 10 536 17 479 0.0 569
MsG0280006618.01.T01 AT4G21540 54.779 429 130 6 5 433 17 381 2.14e-157 454
MsG0280006618.01.T01 AT4G21540 56.325 332 87 5 205 536 1 274 2.51e-126 370
MsG0280006618.01.T01 AT5G23450 32.883 222 118 10 108 324 249 444 8.03e-19 90.9
MsG0280006618.01.T01 AT5G23450 32.883 222 118 10 108 324 249 444 8.03e-19 90.9
MsG0280006618.01.T01 AT5G23450 32.883 222 118 10 108 324 249 444 8.03e-19 90.9
MsG0280006618.01.T01 AT5G23450 32.883 222 118 10 108 324 249 444 8.07e-19 90.9
MsG0280006618.01.T01 AT5G23450 32.035 231 123 10 108 324 249 459 2.75e-18 89.0

Find 157 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGGTGGGGTCCACTTTC+CGG 0.221113 2:+4133572 MsG0280006618.01.T01:five_prime_UTR
CATTTACTGAACCGGGTTTC+CGG 0.236823 2:+4133545 MsG0280006618.01.T01:five_prime_UTR
AGATTCAGATGGTGAGGTTT+TGG 0.263213 2:+4137674 MsG0280006618.01.T01:CDS
ATACTATAGATTATAGAATA+TGG 0.264627 2:-4133454 None:intergenic
AAATTTAACCGCCAACAATT+TGG 0.269751 2:-4137943 None:intergenic
GCAGTTCTCCGACGGTTATC+TGG 0.285599 2:+4137360 MsG0280006618.01.T01:intron
TATTAGTGGAGATGGAATTT+TGG 0.307587 2:+4134342 MsG0280006618.01.T01:CDS
CCACATCAAGCTGTCGCTTA+TGG 0.316805 2:-4135510 None:intergenic
ATGAATTGGAGAGTTATAAA+TGG 0.319462 2:+4136800 MsG0280006618.01.T01:CDS
AATGATGTCAGAGCTGAATA+AGG 0.325937 2:+4137426 MsG0280006618.01.T01:CDS
CCGGATTTCATTTACTGAAC+CGG 0.341892 2:+4133537 MsG0280006618.01.T01:five_prime_UTR
TGATTTCTTCGGATTACTTA+AGG 0.342387 2:+4136076 MsG0280006618.01.T01:CDS
CACCTGGGTTTGAGTCTTAC+GGG 0.346554 2:+4136657 MsG0280006618.01.T01:CDS
CCAGGCAAATCTACTATTAG+AGG 0.349615 2:+4136695 MsG0280006618.01.T01:CDS
GATGGAATTGTTTGTATTAG+TGG 0.356981 2:+4134328 MsG0280006618.01.T01:CDS
CAATAAATTCATGAAGCTTC+AGG 0.363216 2:-4133875 None:intergenic
AAATGTACGTTTGATTTCTT+CGG 0.368806 2:+4136065 MsG0280006618.01.T01:CDS
ATGGACCCTTTATTAGTGTC+TGG 0.370216 2:+4136819 MsG0280006618.01.T01:CDS
TTGCAGATAACAGTGGATAA+AGG 0.371104 2:+4137753 MsG0280006618.01.T01:CDS
TGTTATCTGCAATTTATCAT+AGG 0.373214 2:-4137742 None:intergenic
GTTACTCGGTCCGAAAATAA+AGG 0.379470 2:-4133606 None:intergenic
TAAACTTGGAAAATATGAAT+TGG 0.383486 2:+4136786 MsG0280006618.01.T01:CDS
GTGAACCCAGACACTAATAA+AGG 0.387070 2:-4136825 None:intergenic
CTGGGTTCACAATGTACCTT+GGG 0.390540 2:+4136838 MsG0280006618.01.T01:CDS
CCTCGTCGGAGGAAAATCTT+AGG 0.394221 2:+4133844 MsG0280006618.01.T01:CDS
TTGCAAACACTTTGTTATCA+AGG 0.400837 2:+4136755 MsG0280006618.01.T01:CDS
GCACCTGGGTTTGAGTCTTA+CGG 0.401683 2:+4136656 MsG0280006618.01.T01:CDS
ACCGGGTTTCCGGCTGAGAT+TGG 0.404929 2:+4133555 MsG0280006618.01.T01:five_prime_UTR
CGGAGGAAAATCTTAGGCTT+TGG 0.405855 2:+4133850 MsG0280006618.01.T01:CDS
CAAGGAACGAGCAACCTCTT+TGG 0.408410 2:-4134290 None:intergenic
GGTTTCCGGCTGAGATTGGT+GGG 0.408630 2:+4133559 MsG0280006618.01.T01:five_prime_UTR
GTGTGAGCAGAAGGCTTTGA+TGG 0.409544 2:+4137719 MsG0280006618.01.T01:CDS
TGCTGCTCCACCGGTGAAGC+TGG 0.410734 2:+4133789 MsG0280006618.01.T01:CDS
AGGTCCTTGGTGCGTGTACC+AGG 0.410998 2:-4137633 None:intergenic
AGCCTTCTGCTCACACTTGT+AGG 0.411998 2:-4137712 None:intergenic
CTTAAAATCACAAACAAACT+TGG 0.416805 2:-4136012 None:intergenic
TTGAATGCTTTGGATTACTT+AGG 0.418545 2:+4136035 MsG0280006618.01.T01:CDS
GCCGTTCTTGCCATCATTCG+AGG 0.424674 2:+4135380 MsG0280006618.01.T01:CDS
TGGGGTCCACTTTCCGGAGA+TGG 0.427437 2:+4133578 MsG0280006618.01.T01:exon
TCTGCCAACTCTTCAATTTG+AGG 0.427553 2:+4136603 MsG0280006618.01.T01:CDS
ACTTTGTAAGGTACTGGAAA+TGG 0.432146 2:+4135305 MsG0280006618.01.T01:intron
GCACATTTCTTCCCACCAAA+TGG 0.437130 2:-4134094 None:intergenic
GGGTTTCCGGCTGAGATTGG+TGG 0.438428 2:+4133558 MsG0280006618.01.T01:five_prime_UTR
CCTTTGTAACACCAAATTGT+TGG 0.444550 2:+4137932 MsG0280006618.01.T01:three_prime_UTR
CCTCTAATAGTAGATTTGCC+TGG 0.445558 2:-4136695 None:intergenic
GCTTCTTCAAAGAGAGGATT+GGG 0.446128 2:+4134810 MsG0280006618.01.T01:CDS
CCGTGCCGTTGACGGTTACT+CGG 0.447055 2:-4133620 None:intergenic
CAATATATTTGATGCTGTAC+AGG 0.447490 2:-4137897 None:intergenic
TCAGTATATTGATGTTGGCA+TGG 0.447673 2:+4135563 MsG0280006618.01.T01:CDS
CGGATTTCATTTACTGAACC+GGG 0.449349 2:+4133538 MsG0280006618.01.T01:five_prime_UTR
TATCTCCGAGACGTGAAAAC+CGG 0.452293 2:+4133518 MsG0280006618.01.T01:five_prime_UTR
CAGTATATTGATGTTGGCAT+GGG 0.452709 2:+4135564 MsG0280006618.01.T01:CDS
CGGCGTTACCGTGCCGTTGA+CGG 0.456879 2:-4133628 None:intergenic
ACAAAACTGACCTTTGCATC+TGG 0.460288 2:-4136884 None:intergenic
TGAATGCTTTGGATTACTTA+GGG 0.461393 2:+4136036 MsG0280006618.01.T01:CDS
GGCTTCTTCAAAGAGAGGAT+TGG 0.462592 2:+4134809 MsG0280006618.01.T01:CDS
TGGACCCTTTATTAGTGTCT+GGG 0.462795 2:+4136820 MsG0280006618.01.T01:CDS
CAAAGAGGTTGCTCGTTCCT+TGG 0.463356 2:+4134291 MsG0280006618.01.T01:CDS
TTAACATGTTCCCCTTCACT+TGG 0.470645 2:-4136731 None:intergenic
CCGGTTCAGTAAATGAAATC+CGG 0.473779 2:-4133537 None:intergenic
ATTGTTTGTATTAGTGGAGA+TGG 0.474601 2:+4134334 MsG0280006618.01.T01:CDS
CCCCTTGGAATAGTTCCTGC+AGG 0.474665 2:+4134850 MsG0280006618.01.T01:CDS
TTACCCCTATGTAATACTCT+TGG 0.481543 2:+4137790 MsG0280006618.01.T01:exon
CTCTAATAGTAGATTTGCCT+GGG 0.487949 2:-4136694 None:intergenic
AATAAAGGACGATCCATCTC+CGG 0.494389 2:-4133591 None:intergenic
TGAACCCAGACACTAATAAA+GGG 0.495010 2:-4136824 None:intergenic
TCAAGGACCTGAAATAAACT+TGG 0.497607 2:+4136772 MsG0280006618.01.T01:CDS
TTCTCACCGACGGTAGGCTA+TGG 0.502494 2:+4133658 MsG0280006618.01.T01:CDS
ATTAACCAAGAGTATTACAT+AGG 0.504287 2:-4137795 None:intergenic
TTGACAACAAATGTAACTTC+GGG 0.505763 2:-4137405 None:intergenic
CGTGACGGTTGCTGCTCCAC+CGG 0.506961 2:+4133780 MsG0280006618.01.T01:CDS
ATTGACAACAAATGTAACTT+CGG 0.507378 2:-4137406 None:intergenic
ACCAATCTCAGCCGGAAACC+CGG 0.507435 2:-4133556 None:intergenic
AGATTTGCCTGGGTAACTGC+TGG 0.509934 2:-4136684 None:intergenic
CATGAATTTATTGATTCTCT+CGG 0.510453 2:+4133885 MsG0280006618.01.T01:CDS
GTCTGAAAAGTATCGGTGGA+TGG 0.510582 2:+4135717 MsG0280006618.01.T01:CDS
TCCGTATGTCACGTACCTAA+AGG 0.512712 2:+4137465 MsG0280006618.01.T01:CDS
ACCTCGAATGATGGCAAGAA+CGG 0.516893 2:-4135381 None:intergenic
TCTGGGTTCACAATGTACCT+TGG 0.516933 2:+4136837 MsG0280006618.01.T01:CDS
CAAATTCAACTCACTATACA+AGG 0.517431 2:+4134163 MsG0280006618.01.T01:CDS
AATGATGGCAAGAACGGCAT+TGG 0.517676 2:-4135375 None:intergenic
AAATCTCTGCTTGATTCAGT+TGG 0.518177 2:+4135335 MsG0280006618.01.T01:CDS
AACGAGTCTACCAGCTTCAC+CGG 0.520838 2:-4133799 None:intergenic
TTAACCAAGAGTATTACATA+GGG 0.530522 2:-4137794 None:intergenic
TGGACTGAAACCTCGAATGA+TGG 0.530669 2:-4135390 None:intergenic
ATAGCCTCAAATTGAAGAGT+TGG 0.533156 2:-4136607 None:intergenic
GACGATCCATCTCCGGAAAG+TGG 0.536077 2:-4133584 None:intergenic
TTGTAACACCAAATTGTTGG+CGG 0.541853 2:+4137935 MsG0280006618.01.T01:three_prime_UTR
ACGCACCAAGGACCTAGAAA+AGG 0.542258 2:+4137641 MsG0280006618.01.T01:CDS
ATGATGTCAGAGCTGAATAA+GGG 0.543037 2:+4137427 MsG0280006618.01.T01:CDS
CATCAAACTCAAGACTCTTG+TGG 0.543663 2:+4133752 MsG0280006618.01.T01:CDS
TAAGACTCAAACCCAGGTGC+AGG 0.544026 2:-4136653 None:intergenic
ACAGCAATAAAGACGCCCCT+TGG 0.545236 2:+4134835 MsG0280006618.01.T01:CDS
ACCTTTAGGTACGTGACATA+CGG 0.546444 2:-4137466 None:intergenic
TCTGAAAAGTATCGGTGGAT+GGG 0.552297 2:+4135718 MsG0280006618.01.T01:CDS
AACCTACAAGTGTGAGCAGA+AGG 0.552703 2:+4137710 MsG0280006618.01.T01:CDS
AAAGCTTTCAGCTTGGAACC+TGG 0.553371 2:+4137615 MsG0280006618.01.T01:CDS
AACAGTAGCGATCCAAGTGA+AGG 0.555499 2:+4136719 MsG0280006618.01.T01:CDS
TCCCCGTAAGACTCAAACCC+AGG 0.556710 2:-4136659 None:intergenic
TGGTAAATGCAGTTCTCCGA+CGG 0.556721 2:+4137352 MsG0280006618.01.T01:intron
AAAGGTGAAAGCTTTCAGCT+TGG 0.560686 2:+4137608 MsG0280006618.01.T01:intron
GAAACAAGAAATAAACCTGC+AGG 0.566865 2:-4134865 None:intergenic
CAGGCAAATCTACTATTAGA+GGG 0.572549 2:+4136696 MsG0280006618.01.T01:CDS
AACCTGCAGGAACTATTCCA+AGG 0.573219 2:-4134852 None:intergenic
TGGACCCCACCAATCTCAGC+CGG 0.575018 2:-4133564 None:intergenic
ACCTGCAGGAACTATTCCAA+GGG 0.581978 2:-4134851 None:intergenic
TTCAATTTGAGGCTATACAA+TGG 0.583619 2:+4136614 MsG0280006618.01.T01:CDS
ACATAGAGTCTGAAAAGTAT+CGG 0.585230 2:+4135710 MsG0280006618.01.T01:CDS
ATCGTGCTTTGAAATATCCA+AGG 0.586577 2:-4134308 None:intergenic
ACATCAGCTACATGCCAAAG+AGG 0.586600 2:+4134276 MsG0280006618.01.T01:CDS
CCAAGGACCTAGAAAAGGAA+GGG 0.587821 2:+4137646 MsG0280006618.01.T01:CDS
TCGGACCGAGTAACCGTCAA+CGG 0.591061 2:+4133615 MsG0280006618.01.T01:CDS
AAACGGGCTTCTTCAAAGAG+AGG 0.596062 2:+4134804 MsG0280006618.01.T01:CDS
ACAGTAGCGATCCAAGTGAA+GGG 0.596263 2:+4136720 MsG0280006618.01.T01:CDS
ACCAAGGACCTAGAAAAGGA+AGG 0.599301 2:+4137645 MsG0280006618.01.T01:CDS
GATCATAGATTCAGATGGTG+AGG 0.602096 2:+4137668 MsG0280006618.01.T01:CDS
TCACCGACGGTAGGCTATGG+TGG 0.602299 2:+4133661 MsG0280006618.01.T01:CDS
TCTGGTTTCCCCTTGTGTGA+TGG 0.603088 2:-4135536 None:intergenic
CCAACAATTTGGTGTTACAA+AGG 0.603222 2:-4137932 None:intergenic
CGACGGTAGGCTATGGTGGT+CGG 0.603972 2:+4133665 MsG0280006618.01.T01:CDS
ATATTTGATGCTGTACAGGA+AGG 0.606328 2:-4137893 None:intergenic
TAGCTCTTCTCACCGACGGT+AGG 0.609654 2:+4133652 MsG0280006618.01.T01:CDS
GGGGAGTCCAGCAGTTACCC+AGG 0.614345 2:+4136677 MsG0280006618.01.T01:CDS
GTAAGGTACTGGAAATGGCA+TGG 0.615002 2:+4135310 MsG0280006618.01.T01:intron
AATGGCAGCACCAGATGCAA+AGG 0.617345 2:+4136874 MsG0280006618.01.T01:CDS
GGTAGGCTATGGTGGTCGGA+AGG 0.617653 2:+4133669 MsG0280006618.01.T01:CDS
ACGGCATTGGCTATTGCGCA+AGG 0.619785 2:-4135362 None:intergenic
GTTTCCGGCTGAGATTGGTG+GGG 0.623778 2:+4133560 MsG0280006618.01.T01:five_prime_UTR
TTGGATATTTCAAAGCACGA+TGG 0.629196 2:+4134310 MsG0280006618.01.T01:CDS
GAAGGGATCATAGATTCAGA+TGG 0.634115 2:+4137663 MsG0280006618.01.T01:CDS
GTTCTCGGATTCGTCTCTAG+TGG 0.634222 2:+4133723 MsG0280006618.01.T01:CDS
CCATAAGCGACAGCTTGATG+TGG 0.637287 2:+4135510 MsG0280006618.01.T01:CDS
AGTATATTGATGTTGGCATG+GGG 0.637619 2:+4135565 MsG0280006618.01.T01:CDS
ACTCTTGTGGAAGCTCGTGA+CGG 0.644300 2:+4133765 MsG0280006618.01.T01:CDS
CCGAGTAACCGTCAACGGCA+CGG 0.645401 2:+4133620 MsG0280006618.01.T01:CDS
CAGTAGCGATCCAAGTGAAG+GGG 0.649527 2:+4136721 MsG0280006618.01.T01:CDS
GAAAGAACTAAACATTAACA+TGG 0.649943 2:-4133405 None:intergenic
GATGTGGCTACCATCACACA+AGG 0.653053 2:+4135526 MsG0280006618.01.T01:CDS
ACCTGGGTTTGAGTCTTACG+GGG 0.653794 2:+4136658 MsG0280006618.01.T01:CDS
TAGAGTCTGAAAAGTATCGG+TGG 0.655131 2:+4135713 MsG0280006618.01.T01:CDS
ATTGTGTCTTCAGCACCCCA+AGG 0.656208 2:-4136854 None:intergenic
CCGTCGGTGAGAAGAGCTAA+CGG 0.657017 2:-4133648 None:intergenic
GATCAAGTCCAGATAACCGT+CGG 0.657829 2:-4137368 None:intergenic
GAGTCTACCAGCTTCACCGG+TGG 0.658858 2:-4133796 None:intergenic
CCGTTAGCTCTTCTCACCGA+CGG 0.661100 2:+4133648 MsG0280006618.01.T01:CDS
GGAACCTGGTACACGCACCA+AGG 0.661636 2:+4137629 MsG0280006618.01.T01:CDS
GGTGGTCGGAAGGAATTCAA+CGG 0.661973 2:+4133679 MsG0280006618.01.T01:CDS
TGATAAATTGCAGATAACAG+TGG 0.665901 2:+4137746 MsG0280006618.01.T01:CDS
TGTGGCTACCATCACACAAG+GGG 0.666829 2:+4135528 MsG0280006618.01.T01:CDS
ATGTCAGAGCTGAATAAGGG+AGG 0.679486 2:+4137430 MsG0280006618.01.T01:CDS
CGACCACCATAGCCTACCGT+CGG 0.689684 2:-4133664 None:intergenic
TTGGGGTGCTGAAGACACAA+TGG 0.697160 2:+4136856 MsG0280006618.01.T01:CDS
ATGTGGCTACCATCACACAA+GGG 0.702286 2:+4135527 MsG0280006618.01.T01:CDS
TAACCAAGAGTATTACATAG+GGG 0.710056 2:-4137793 None:intergenic
CCTGCAGGAACTATTCCAAG+GGG 0.737821 2:-4134850 None:intergenic
TGTGTGTGTACAATATTGCG+TGG 0.750543 2:-4137841 None:intergenic
TGGGTTCACAATGTACCTTG+GGG 0.763075 2:+4136839 MsG0280006618.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATGTATATGAAATA+TGG + Chr2:4135482-4135501 MsG0280006618.01.T01:intron 10.0%
!! ATCATTATTCTATTATAATT+TGG + Chr2:4137332-4137351 MsG0280006618.01.T01:intron 10.0%
!!! CTTAATTTGTTTAATTTTAA+TGG + Chr2:4137079-4137098 MsG0280006618.01.T01:intron 10.0%
!!! TGATTATATTTTTTAATTTC+TGG - Chr2:4133368-4133387 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTGACA+AGG + Chr2:4136114-4136133 MsG0280006618.01.T01:intron 10.0%
!! ATACTATAGATTATAGAATA+TGG - Chr2:4133457-4133476 None:intergenic 15.0%
!! ATTAAAAATATTTACACCAT+TGG - Chr2:4137279-4137298 None:intergenic 15.0%
!! CAGAAATTTATTGTTTATTA+TGG - Chr2:4137185-4137204 None:intergenic 15.0%
!! TCAAATTATACTTTATGAAT+TGG + Chr2:4137112-4137131 MsG0280006618.01.T01:intron 15.0%
!! TTAGATTAGAAAGAAAAAAA+AGG - Chr2:4134757-4134776 None:intergenic 15.0%
!!! CAAATATGTTATTTTATTTC+AGG + Chr2:4135670-4135689 MsG0280006618.01.T01:intron 15.0%
!! AAGATGTGAACTTTATAAAA+TGG - Chr2:4135775-4135794 None:intergenic 20.0%
!! TAAACTTGGAAAATATGAAT+TGG + Chr2:4136786-4136805 MsG0280006618.01.T01:CDS 20.0%
!! TTCACAACACAATATATTAA+TGG - Chr2:4134016-4134035 None:intergenic 20.0%
!!! AAAGTATTACACAATATATC+AGG - Chr2:4137499-4137518 None:intergenic 20.0%
!!! ACTATGAATTTTGATGATTT+AGG + Chr2:4134040-4134059 MsG0280006618.01.T01:intron 20.0%
!!! ATATTTTCCAAGTTTATTTC+AGG - Chr2:4136782-4136801 None:intergenic 20.0%
!!! ATTTTTCAGTATATTGATGT+TGG + Chr2:4135558-4135577 MsG0280006618.01.T01:CDS 20.0%
!!! CTATTTTACTATTAACTCTT+CGG - Chr2:4135033-4135052 None:intergenic 20.0%
!!! GTAAAATAGGAATTTTATTC+AGG + Chr2:4135044-4135063 MsG0280006618.01.T01:intron 20.0%
!!! TCTTTAGTTTGTGTTTTATT+TGG + Chr2:4136953-4136972 MsG0280006618.01.T01:intron 20.0%
!!! TTGTATCATAAATGAACTTT+TGG + Chr2:4136421-4136440 MsG0280006618.01.T01:intron 20.0%
! AACAACTAATCACTAACATT+TGG - Chr2:4135869-4135888 None:intergenic 25.0%
! AATAGAAATTGTAACATCCA+TGG + Chr2:4134633-4134652 MsG0280006618.01.T01:intron 25.0%
! AATGTATATGAAATATGGAC+AGG + Chr2:4135487-4135506 MsG0280006618.01.T01:intron 25.0%
! AATTAGAAAGAAAGAGGTAA+AGG - Chr2:4136186-4136205 None:intergenic 25.0%
! ACAAAAACTAGCAATTTCTT+TGG - Chr2:4134070-4134089 None:intergenic 25.0%
! ACATGTTTGAATGACATAAA+TGG - Chr2:4135413-4135432 None:intergenic 25.0%
! ATAGAAATTGTAACATCCAT+GGG + Chr2:4134634-4134653 MsG0280006618.01.T01:intron 25.0%
! ATGAATTGGAGAGTTATAAA+TGG + Chr2:4136800-4136819 MsG0280006618.01.T01:CDS 25.0%
! ATTCTAACAAAAATGATCTG+CGG - Chr2:4135220-4135239 None:intergenic 25.0%
! ATTGACAACAAATGTAACTT+CGG - Chr2:4137409-4137428 None:intergenic 25.0%
! ATTTGCTTGATTTACTTACA+AGG + Chr2:4135176-4135195 MsG0280006618.01.T01:intron 25.0%
! CATCAATATACTGAAAAATC+TGG - Chr2:4135557-4135576 None:intergenic 25.0%
! CATTGAAATTAGAAAGAAAG+AGG - Chr2:4136192-4136211 None:intergenic 25.0%
! CGAAGAGTTAATAGTAAAAT+AGG + Chr2:4135031-4135050 MsG0280006618.01.T01:intron 25.0%
! CTTAAAATCACAAACAAACT+TGG - Chr2:4136015-4136034 None:intergenic 25.0%
! CTTTGCAATATAAACATGAA+AGG - Chr2:4134422-4134441 None:intergenic 25.0%
! GAAAGAACTAAACATTAACA+TGG - Chr2:4133408-4133427 None:intergenic 25.0%
! GATAAAACAAGATTCCATTT+AGG - Chr2:4135829-4135848 None:intergenic 25.0%
! GATATGTATACAGAAAAGTA+AGG - Chr2:4136268-4136287 None:intergenic 25.0%
! GTTATAAAAGAGATATGAGT+TGG + Chr2:4136537-4136556 MsG0280006618.01.T01:intron 25.0%
! TAATTACTCTTACCATAGAT+TGG + Chr2:4135588-4135607 MsG0280006618.01.T01:intron 25.0%
! TGGAATCAATTCATACAAAT+TGG - Chr2:4137025-4137044 None:intergenic 25.0%
! TGTATCTTGCAATAAATCAA+AGG + Chr2:4137590-4137609 MsG0280006618.01.T01:intron 25.0%
! TGTTATCTGCAATTTATCAT+AGG - Chr2:4137745-4137764 None:intergenic 25.0%
! TTAGAAGATAATTGCAACAA+AGG - Chr2:4135966-4135985 None:intergenic 25.0%
! TTCTCATGTAAGAATCATAA+TGG + Chr2:4134559-4134578 MsG0280006618.01.T01:intron 25.0%
!! AAATGTACGTTTGATTTCTT+CGG + Chr2:4136065-4136084 MsG0280006618.01.T01:CDS 25.0%
!! CTCTTGGTTAATTATTTTCT+CGG + Chr2:4137806-4137825 MsG0280006618.01.T01:three_prime_UTR 25.0%
!! GAATCATAATGGTTTTTGTT+TGG + Chr2:4134570-4134589 MsG0280006618.01.T01:intron 25.0%
!! GTAAACTTTTTACTGAGAAT+GGG + Chr2:4134937-4134956 MsG0280006618.01.T01:intron 25.0%
!! TATCATAAATGAACTTTTGG+TGG + Chr2:4136424-4136443 MsG0280006618.01.T01:intron 25.0%
!! TCTTGGTTAATTATTTTCTC+GGG + Chr2:4137807-4137826 MsG0280006618.01.T01:three_prime_UTR 25.0%
!! TGTAAACTTTTTACTGAGAA+TGG + Chr2:4134936-4134955 MsG0280006618.01.T01:intron 25.0%
!! TTTTATGTTTTCTTGAGTAG+AGG + Chr2:4134889-4134908 MsG0280006618.01.T01:intron 25.0%
!! TTTTCGTAGATAAATACCAA+TGG + Chr2:4137260-4137279 MsG0280006618.01.T01:intron 25.0%
!!! ACAAACTAAAGAGTGTTAAT+GGG - Chr2:4136945-4136964 None:intergenic 25.0%
!!! ACATTTTAGTAGGTTGTAAA+CGG + Chr2:4134787-4134806 MsG0280006618.01.T01:intron 25.0%
!!! ATTAACCAAGAGTATTACAT+AGG - Chr2:4137798-4137817 None:intergenic 25.0%
!!! CATGAATTTATTGATTCTCT+CGG + Chr2:4133885-4133904 MsG0280006618.01.T01:CDS 25.0%
!!! TAGTTTGTGTTTATCTTTTG+AGG + Chr2:4134442-4134461 MsG0280006618.01.T01:intron 25.0%
!!! TGATTTTAAGTTGAATGCTT+TGG + Chr2:4136025-4136044 MsG0280006618.01.T01:CDS 25.0%
!!! TTAACCAAGAGTATTACATA+GGG - Chr2:4137797-4137816 None:intergenic 25.0%
AAATTTAACCGCCAACAATT+TGG - Chr2:4137946-4137965 None:intergenic 30.0%
AGCAATCCATTAAGAGATTT+CGG - Chr2:4135128-4135147 None:intergenic 30.0%
ATGGGAAGTAAAATTGCAAT+GGG + Chr2:4134652-4134671 MsG0280006618.01.T01:intron 30.0%
ATTCAAACATGTCATATCCT+AGG + Chr2:4135421-4135440 MsG0280006618.01.T01:intron 30.0%
ATTGTTTGTATTAGTGGAGA+TGG + Chr2:4134334-4134353 MsG0280006618.01.T01:CDS 30.0%
ATTTGAGCATCATCAAAAAG+TGG - Chr2:4134148-4134167 None:intergenic 30.0%
CAAAATGTGATGCTATTCAT+TGG - Chr2:4135620-4135639 None:intergenic 30.0%
CAAATTCAACTCACTATACA+AGG + Chr2:4134163-4134182 MsG0280006618.01.T01:CDS 30.0%
CAATAAATTCATGAAGCTTC+AGG - Chr2:4133878-4133897 None:intergenic 30.0%
CAATATATTTGATGCTGTAC+AGG - Chr2:4137900-4137919 None:intergenic 30.0%
CACAAACTCAATCAACAAAA+AGG - Chr2:4134241-4134260 None:intergenic 30.0%
GAGAAAAGAGAAATACATCA+CGG + Chr2:4136289-4136308 MsG0280006618.01.T01:intron 30.0%
GAGGTAAAGGAATATATCAT+CGG - Chr2:4136173-4136192 None:intergenic 30.0%
GATGGAATTGTTTGTATTAG+TGG + Chr2:4134328-4134347 MsG0280006618.01.T01:CDS 30.0%
TGATAAATTGCAGATAACAG+TGG + Chr2:4137746-4137765 MsG0280006618.01.T01:CDS 30.0%
TGATTTCTTCGGATTACTTA+AGG + Chr2:4136076-4136095 MsG0280006618.01.T01:CDS 30.0%
TTAGTTGTTAGAATTGTTCG+CGG + Chr2:4135880-4135899 MsG0280006618.01.T01:intron 30.0%
TTATTAGGTGTACAAAAACC+TGG - Chr2:4137225-4137244 None:intergenic 30.0%
TTGACAACAAATGTAACTTC+GGG - Chr2:4137408-4137427 None:intergenic 30.0%
! AATATATCATCGGACTAGAA+TGG - Chr2:4136163-4136182 None:intergenic 30.0%
! ACATAGAGTCTGAAAAGTAT+CGG + Chr2:4135710-4135729 MsG0280006618.01.T01:CDS 30.0%
! ATAGCATCACATTTTGTTGA+TGG + Chr2:4135624-4135643 MsG0280006618.01.T01:intron 30.0%
! GAAGTATCTCTCAAAATCAA+AGG - Chr2:4136329-4136348 None:intergenic 30.0%
! GAGATACTTCTTAGTTCTTA+CGG + Chr2:4136339-4136358 MsG0280006618.01.T01:intron 30.0%
! GCGTTTAGCTGAATTTTATT+AGG - Chr2:4137240-4137259 None:intergenic 30.0%
! GTTAAATCTCTCATTTTGTG+TGG + Chr2:4136361-4136380 MsG0280006618.01.T01:intron 30.0%
! TATTAGTGGAGATGGAATTT+TGG + Chr2:4134342-4134361 MsG0280006618.01.T01:CDS 30.0%
! TGAATGCTTTGGATTACTTA+GGG + Chr2:4136036-4136055 MsG0280006618.01.T01:CDS 30.0%
! TTCAATTTGAGGCTATACAA+TGG + Chr2:4136614-4136633 MsG0280006618.01.T01:CDS 30.0%
! TTGAATGCTTTGGATTACTT+AGG + Chr2:4136035-4136054 MsG0280006618.01.T01:CDS 30.0%
! TTGCAAACACTTTGTTATCA+AGG + Chr2:4136755-4136774 MsG0280006618.01.T01:CDS 30.0%
! TTTACAGTAATGAAGTACCT+AGG - Chr2:4135441-4135460 None:intergenic 30.0%
! TTTGTGTGGTTCTACTTTAA+AGG + Chr2:4136375-4136394 MsG0280006618.01.T01:intron 30.0%
! TTTTTGTGAATCCATTTGGT+GGG + Chr2:4134083-4134102 MsG0280006618.01.T01:CDS 30.0%
!! ATGGTTTTTGTTTGGAAATG+AGG + Chr2:4134578-4134597 MsG0280006618.01.T01:intron 30.0%
!! CACAAACTAAAGAGTGTTAA+TGG - Chr2:4136946-4136965 None:intergenic 30.0%
!! CATTTTAGTAGGTTGTAAAC+GGG + Chr2:4134788-4134807 MsG0280006618.01.T01:intron 30.0%
!! CTAGTTTTTGTGAATCCATT+TGG + Chr2:4134079-4134098 MsG0280006618.01.T01:CDS 30.0%
!! CTGTGTATTGATTGTTTATC+AGG + Chr2:4134975-4134994 MsG0280006618.01.T01:intron 30.0%
!! TAACCAAGAGTATTACATAG+GGG - Chr2:4137796-4137815 None:intergenic 30.0%
!! TGGTTTTTGTTTGGAAATGA+GGG + Chr2:4134579-4134598 MsG0280006618.01.T01:intron 30.0%
AAAAAATGTGTCACAAGCGA+AGG - Chr2:4136490-4136509 None:intergenic 35.0%
AAATCTCTGCTTGATTCAGT+TGG + Chr2:4135335-4135354 MsG0280006618.01.T01:CDS 35.0%
AAGCTCTTCCATACTTTGTA+AGG + Chr2:4135293-4135312 MsG0280006618.01.T01:intron 35.0%
AATGATGTCAGAGCTGAATA+AGG + Chr2:4137426-4137445 MsG0280006618.01.T01:CDS 35.0%
ACAAATTGGTCCTCTTAATG+AGG - Chr2:4137011-4137030 None:intergenic 35.0%
ACATAAGGATTGGAGAGATA+AGG - Chr2:4135924-4135943 None:intergenic 35.0%
AGTATATTGATGTTGGCATG+GGG + Chr2:4135565-4135584 MsG0280006618.01.T01:CDS 35.0%
ATAGCCTCAAATTGAAGAGT+TGG - Chr2:4136610-4136629 None:intergenic 35.0%
ATATTTGATGCTGTACAGGA+AGG - Chr2:4137896-4137915 None:intergenic 35.0%
ATCTGTAGATAACGAGTGTA+TGG + Chr2:4135245-4135264 MsG0280006618.01.T01:intron 35.0%
ATCTTCTAACACTTCAGTTC+TGG + Chr2:4135977-4135996 MsG0280006618.01.T01:intron 35.0%
ATGATGTCAGAGCTGAATAA+GGG + Chr2:4137427-4137446 MsG0280006618.01.T01:CDS 35.0%
CAGGCAAATCTACTATTAGA+GGG + Chr2:4136696-4136715 MsG0280006618.01.T01:CDS 35.0%
CAGTATATTGATGTTGGCAT+GGG + Chr2:4135564-4135583 MsG0280006618.01.T01:CDS 35.0%
CAGTTACCGAAATCTCTTAA+TGG + Chr2:4135119-4135138 MsG0280006618.01.T01:intron 35.0%
CATGGGAAGTAAAATTGCAA+TGG + Chr2:4134651-4134670 MsG0280006618.01.T01:intron 35.0%
CCTTTGTAACACCAAATTGT+TGG + Chr2:4137932-4137951 MsG0280006618.01.T01:three_prime_UTR 35.0%
CTCTAATAGTAGATTTGCCT+GGG - Chr2:4136697-4136716 None:intergenic 35.0%
GAAACAAGAAATAAACCTGC+AGG - Chr2:4134868-4134887 None:intergenic 35.0%
TAGTTGTTAGAATTGTTCGC+GGG + Chr2:4135881-4135900 MsG0280006618.01.T01:intron 35.0%
TATCAGGAAATCACACCTTT+AGG - Chr2:4137483-4137502 None:intergenic 35.0%
TATGGAAGAGCTTATTAGCT+TGG - Chr2:4135286-4135305 None:intergenic 35.0%
TCAAGGACCTGAAATAAACT+TGG + Chr2:4136772-4136791 MsG0280006618.01.T01:CDS 35.0%
TCAGTATATTGATGTTGGCA+TGG + Chr2:4135563-4135582 MsG0280006618.01.T01:CDS 35.0%
TCCAAATAACCTAGCACTAT+TGG + Chr2:4134471-4134490 MsG0280006618.01.T01:intron 35.0%
TCCAATAGTGCTAGGTTATT+TGG - Chr2:4134475-4134494 None:intergenic 35.0%
TCTCAATTCTTGTATCAGCA+TGG - Chr2:4135095-4135114 None:intergenic 35.0%
TCTGTAGATAACGAGTGTAT+GGG + Chr2:4135246-4135265 MsG0280006618.01.T01:intron 35.0%
TCTTCTAACACTTCAGTTCT+GGG + Chr2:4135978-4135997 MsG0280006618.01.T01:intron 35.0%
TGAACCCAGACACTAATAAA+GGG - Chr2:4136827-4136846 None:intergenic 35.0%
TGGGAAGTAAAATTGCAATG+GGG + Chr2:4134653-4134672 MsG0280006618.01.T01:intron 35.0%
TTACCCCTATGTAATACTCT+TGG + Chr2:4137790-4137809 MsG0280006618.01.T01:exon 35.0%
TTCATCGCGATTTGTACATT+TGG - Chr2:4137045-4137064 None:intergenic 35.0%
TTCCAGTACCTTACAAAGTA+TGG - Chr2:4135304-4135323 None:intergenic 35.0%
TTCCATACTTTGTAAGGTAC+TGG + Chr2:4135299-4135318 MsG0280006618.01.T01:intron 35.0%
TTGCAGATAACAGTGGATAA+AGG + Chr2:4137753-4137772 MsG0280006618.01.T01:CDS 35.0%
TTGGATATTTCAAAGCACGA+TGG + Chr2:4134310-4134329 MsG0280006618.01.T01:CDS 35.0%
TTGTAACACCAAATTGTTGG+CGG + Chr2:4137935-4137954 MsG0280006618.01.T01:three_prime_UTR 35.0%
! AACTTTTTACTGAGAATGGG+TGG + Chr2:4134940-4134959 MsG0280006618.01.T01:intron 35.0%
! ACTTTTTACTGAGAATGGGT+GGG + Chr2:4134941-4134960 MsG0280006618.01.T01:intron 35.0%
! ATAGAGTGGTTTGGAACATA+AGG - Chr2:4135939-4135958 None:intergenic 35.0%
! ATGGATTGCTGGTCTATTAA+CGG + Chr2:4135138-4135157 MsG0280006618.01.T01:intron 35.0%
! CATTGCAATTTTACTTCCCA+TGG - Chr2:4134653-4134672 None:intergenic 35.0%
! CTTCCATAAGAAAGAAGTGT+CGG - Chr2:4133969-4133988 None:intergenic 35.0%
! GGTTTTCACAATCAAAACGA+TGG - Chr2:4133436-4133455 None:intergenic 35.0%
! GTTTTTCTCTTCTCCCTAAT+GGG + Chr2:4137299-4137318 MsG0280006618.01.T01:intron 35.0%
! GTTTTTGTGAATCCATTTGG+TGG + Chr2:4134082-4134101 MsG0280006618.01.T01:CDS 35.0%
! TGTTTTTCTCTTCTCCCTAA+TGG + Chr2:4137298-4137317 MsG0280006618.01.T01:intron 35.0%
! TTTTTCTCTTCTCCCTAATG+GGG + Chr2:4137300-4137319 MsG0280006618.01.T01:intron 35.0%
!! ACTTTGTAAGGTACTGGAAA+TGG + Chr2:4135305-4135324 MsG0280006618.01.T01:intron 35.0%
!! ATCGTGCTTTGAAATATCCA+AGG - Chr2:4134311-4134330 None:intergenic 35.0%
!! ATTGAGCTTTGAAAGAGTCT+TGG + Chr2:4137531-4137550 MsG0280006618.01.T01:intron 35.0%
!! CAAGCATCACACATTTTAGT+AGG + Chr2:4134777-4134796 MsG0280006618.01.T01:intron 35.0%
!! CCAACAATTTGGTGTTACAA+AGG - Chr2:4137935-4137954 None:intergenic 35.0%
!! GAAATCTCTTAATGGATTGC+TGG + Chr2:4135127-4135146 MsG0280006618.01.T01:intron 35.0%
!!! GATGGATCGTCCTTTATTTT+CGG + Chr2:4133596-4133615 MsG0280006618.01.T01:exon 35.0%
AAAGGAGTGATAGAGTGGTT+TGG - Chr2:4135948-4135967 None:intergenic 40.0%
AAAGGTGAAAGCTTTCAGCT+TGG + Chr2:4137608-4137627 MsG0280006618.01.T01:intron 40.0%
AAGCATGATCCAATAGTGCT+AGG - Chr2:4134483-4134502 None:intergenic 40.0%
AATAAAGGACGATCCATCTC+CGG - Chr2:4133594-4133613 None:intergenic 40.0%
ACAAAACTGACCTTTGCATC+TGG - Chr2:4136887-4136906 None:intergenic 40.0%
ACCTTTAGGTACGTGACATA+CGG - Chr2:4137469-4137488 None:intergenic 40.0%
AGTTGTTAGAATTGTTCGCG+GGG + Chr2:4135882-4135901 MsG0280006618.01.T01:intron 40.0%
ATGGACCCTTTATTAGTGTC+TGG + Chr2:4136819-4136838 MsG0280006618.01.T01:CDS 40.0%
ATTAAGCAGATAGAAGCTGC+AGG - Chr2:4136231-4136250 None:intergenic 40.0%
CATCAAACTCAAGACTCTTG+TGG + Chr2:4133752-4133771 MsG0280006618.01.T01:CDS 40.0%
CCAGGCAAATCTACTATTAG+AGG + Chr2:4136695-4136714 MsG0280006618.01.T01:CDS 40.0%
CCGGATTTCATTTACTGAAC+CGG + Chr2:4133537-4133556 MsG0280006618.01.T01:five_prime_UTR 40.0%
CCGGTTCAGTAAATGAAATC+CGG - Chr2:4133540-4133559 None:intergenic 40.0%
CCTCTAATAGTAGATTTGCC+TGG - Chr2:4136698-4136717 None:intergenic 40.0%
CGGATTTCATTTACTGAACC+GGG + Chr2:4133538-4133557 MsG0280006618.01.T01:five_prime_UTR 40.0%
CTGAATATGAGCGTCCTAAA+TGG + Chr2:4135812-4135831 MsG0280006618.01.T01:intron 40.0%
GAAGGGATCATAGATTCAGA+TGG + Chr2:4137663-4137682 MsG0280006618.01.T01:CDS 40.0%
GAGAAATACATCACGGCTTT+AGG + Chr2:4136296-4136315 MsG0280006618.01.T01:intron 40.0%
GATCATAGATTCAGATGGTG+AGG + Chr2:4137668-4137687 MsG0280006618.01.T01:CDS 40.0%
GCTTCTTCAAAGAGAGGATT+GGG + Chr2:4134810-4134829 MsG0280006618.01.T01:CDS 40.0%
GGGAAGTAAAATTGCAATGG+GGG + Chr2:4134654-4134673 MsG0280006618.01.T01:intron 40.0%
GTGAACCCAGACACTAATAA+AGG - Chr2:4136828-4136847 None:intergenic 40.0%
GTTACTCGGTCCGAAAATAA+AGG - Chr2:4133609-4133628 None:intergenic 40.0%
TCCGTTGAAAAAGAGGTTCT+CGG + Chr2:4133708-4133727 MsG0280006618.01.T01:CDS 40.0%
TCTGCCAACTCTTCAATTTG+AGG + Chr2:4136603-4136622 MsG0280006618.01.T01:CDS 40.0%
TCTTGTATCAGCATGGTACT+GGG - Chr2:4135088-4135107 None:intergenic 40.0%
TGGACCCTTTATTAGTGTCT+GGG + Chr2:4136820-4136839 MsG0280006618.01.T01:CDS 40.0%
TGTGTGTGTACAATATTGCG+TGG - Chr2:4137844-4137863 None:intergenic 40.0%
TTAACATGTTCCCCTTCACT+TGG - Chr2:4136734-4136753 None:intergenic 40.0%
TTCTTGTATCAGCATGGTAC+TGG - Chr2:4135089-4135108 None:intergenic 40.0%
! AGATTCAGATGGTGAGGTTT+TGG + Chr2:4137674-4137693 MsG0280006618.01.T01:CDS 40.0%
! ATGGTACTGGGATAAGGATT+AGG - Chr2:4135076-4135095 None:intergenic 40.0%
! CTATGATCCCTTCCTTTTCT+AGG - Chr2:4137656-4137675 None:intergenic 40.0%
! CTTTGAAAGAGTCTTGGCAT+TGG + Chr2:4137537-4137556 MsG0280006618.01.T01:intron 40.0%
! GTGGTTTGGAACATAAGGAT+TGG - Chr2:4135934-4135953 None:intergenic 40.0%
! TGGTACTGGGATAAGGATTA+GGG - Chr2:4135075-4135094 None:intergenic 40.0%
!! GATCAGTTTTAGCCCCATTA+GGG - Chr2:4137315-4137334 None:intergenic 40.0%
!! GTACTCTTTTAACTGCTACC+AGG + Chr2:4137204-4137223 MsG0280006618.01.T01:intron 40.0%
!! TAGAGTCTGAAAAGTATCGG+TGG + Chr2:4135713-4135732 MsG0280006618.01.T01:CDS 40.0%
!! TCTGAAAAGTATCGGTGGAT+GGG + Chr2:4135718-4135737 MsG0280006618.01.T01:CDS 40.0%
!! TGATCAGTTTTAGCCCCATT+AGG - Chr2:4137316-4137335 None:intergenic 40.0%
!!! TCCGAGAACCTCTTTTTCAA+CGG - Chr2:4133712-4133731 None:intergenic 40.0%
!!! TGGAGATGGAATTTTGGTTG+AGG + Chr2:4134348-4134367 MsG0280006618.01.T01:CDS 40.0%
AAAGCTTTCAGCTTGGAACC+TGG + Chr2:4137615-4137634 MsG0280006618.01.T01:CDS 45.0%
AACAGTAGCGATCCAAGTGA+AGG + Chr2:4136719-4136738 MsG0280006618.01.T01:CDS 45.0%
AACCTACAAGTGTGAGCAGA+AGG + Chr2:4137710-4137729 MsG0280006618.01.T01:CDS 45.0%
AACCTGCAGGAACTATTCCA+AGG - Chr2:4134855-4134874 None:intergenic 45.0%
AATGATGGCAAGAACGGCAT+TGG - Chr2:4135378-4135397 None:intergenic 45.0%
ACAGTAGCGATCCAAGTGAA+GGG + Chr2:4136720-4136739 MsG0280006618.01.T01:CDS 45.0%
ACATCAGCTACATGCCAAAG+AGG + Chr2:4134276-4134295 MsG0280006618.01.T01:CDS 45.0%
ACCAAGGACCTAGAAAAGGA+AGG + Chr2:4137645-4137664 MsG0280006618.01.T01:CDS 45.0%
ACCTCGAATGATGGCAAGAA+CGG - Chr2:4135384-4135403 None:intergenic 45.0%
ACCTGCAGGAACTATTCCAA+GGG - Chr2:4134854-4134873 None:intergenic 45.0%
ATGTCAGAGCTGAATAAGGG+AGG + Chr2:4137430-4137449 MsG0280006618.01.T01:CDS 45.0%
ATGTGGCTACCATCACACAA+GGG + Chr2:4135527-4135546 MsG0280006618.01.T01:CDS 45.0%
ATTCACTGCTTTCCTGCTGT+AGG + Chr2:4136577-4136596 MsG0280006618.01.T01:intron 45.0%
CAGCAGGAAAGCAGTGAATA+AGG - Chr2:4136576-4136595 None:intergenic 45.0%
CATTGGCAGTCTCCAATCTA+TGG - Chr2:4135603-4135622 None:intergenic 45.0%
CATTTACTGAACCGGGTTTC+CGG + Chr2:4133545-4133564 MsG0280006618.01.T01:five_prime_UTR 45.0%
CCAAGGACCTAGAAAAGGAA+GGG + Chr2:4137646-4137665 MsG0280006618.01.T01:CDS 45.0%
CGGAGGAAAATCTTAGGCTT+TGG + Chr2:4133850-4133869 MsG0280006618.01.T01:CDS 45.0%
CTGGGTTCACAATGTACCTT+GGG + Chr2:4136838-4136857 MsG0280006618.01.T01:CDS 45.0%
GATCAAGTCCAGATAACCGT+CGG - Chr2:4137371-4137390 None:intergenic 45.0%
GCAACAAAGGAGTGATAGAG+TGG - Chr2:4135953-4135972 None:intergenic 45.0%
GCACATTTCTTCCCACCAAA+TGG - Chr2:4134097-4134116 None:intergenic 45.0%
GGCTTCTTCAAAGAGAGGAT+TGG + Chr2:4134809-4134828 MsG0280006618.01.T01:CDS 45.0%
GTGTCTCTCCGTTGAAAAAG+AGG + Chr2:4133701-4133720 MsG0280006618.01.T01:CDS 45.0%
TATCTCCGAGACGTGAAAAC+CGG + Chr2:4133518-4133537 MsG0280006618.01.T01:five_prime_UTR 45.0%
TCCGTATGTCACGTACCTAA+AGG + Chr2:4137465-4137484 MsG0280006618.01.T01:CDS 45.0%
TCTGGGTTCACAATGTACCT+TGG + Chr2:4136837-4136856 MsG0280006618.01.T01:CDS 45.0%
TGGACTGAAACCTCGAATGA+TGG - Chr2:4135393-4135412 None:intergenic 45.0%
TGGGTTCACAATGTACCTTG+GGG + Chr2:4136839-4136858 MsG0280006618.01.T01:CDS 45.0%
TTAGTCCTTCTGAGCTTCAG+CGG - Chr2:4134614-4134633 None:intergenic 45.0%
! AAACGGGCTTCTTCAAAGAG+AGG + Chr2:4134804-4134823 MsG0280006618.01.T01:CDS 45.0%
! ATCAGCATGGTACTGGGATA+AGG - Chr2:4135082-4135101 None:intergenic 45.0%
! CTAAGATTTTCCTCCGACGA+GGG - Chr2:4133846-4133865 None:intergenic 45.0%
! GAAATCCGGTTTTCACGTCT+CGG - Chr2:4133526-4133545 None:intergenic 45.0%
! GCACCGACACTTCTTTCTTA+TGG + Chr2:4133963-4133982 MsG0280006618.01.T01:intron 45.0%
! TTTCTTTTGTGCCTGCACCT+GGG + Chr2:4136642-4136661 MsG0280006618.01.T01:CDS 45.0%
!! ATGGTGAGGTTTTGGCAAGA+GGG + Chr2:4137682-4137701 MsG0280006618.01.T01:CDS 45.0%
!! GTAAGGTACTGGAAATGGCA+TGG + Chr2:4135310-4135329 MsG0280006618.01.T01:intron 45.0%
!! GTCTGAAAAGTATCGGTGGA+TGG + Chr2:4135717-4135736 MsG0280006618.01.T01:CDS 45.0%
!!! CGTCGTTTTTAAACCCTCGT+CGG + Chr2:4133830-4133849 MsG0280006618.01.T01:CDS 45.0%
!!! TAAATTTTGAATTATTAATA+CGG + Chr2:4137959-4137978 MsG0280006618.01.T01:three_prime_UTR 5.0%
AACGAGTCTACCAGCTTCAC+CGG - Chr2:4133802-4133821 None:intergenic 50.0%
AATGGCAGCACCAGATGCAA+AGG + Chr2:4136874-4136893 MsG0280006618.01.T01:CDS 50.0%
AATTGCTTCCGTGACTAGGG+TGG + Chr2:4136985-4137004 MsG0280006618.01.T01:intron 50.0%
ACAGCAATAAAGACGCCCCT+TGG + Chr2:4134835-4134854 MsG0280006618.01.T01:CDS 50.0%
ACCCTAGTCACGGAAGCAAT+TGG - Chr2:4136986-4137005 None:intergenic 50.0%
ACCTGGGTTTGAGTCTTACG+GGG + Chr2:4136658-4136677 MsG0280006618.01.T01:CDS 50.0%
ACGCACCAAGGACCTAGAAA+AGG + Chr2:4137641-4137660 MsG0280006618.01.T01:CDS 50.0%
ACTAGGGTGGCCTCATTAAG+AGG + Chr2:4136998-4137017 MsG0280006618.01.T01:intron 50.0%
ACTCTTGTGGAAGCTCGTGA+CGG + Chr2:4133765-4133784 MsG0280006618.01.T01:CDS 50.0%
AGATTTGCCTGGGTAACTGC+TGG - Chr2:4136687-4136706 None:intergenic 50.0%
AGCCTTCTGCTCACACTTGT+AGG - Chr2:4137715-4137734 None:intergenic 50.0%
ATTGTGTCTTCAGCACCCCA+AGG - Chr2:4136857-4136876 None:intergenic 50.0%
CAAAGAGGTTGCTCGTTCCT+TGG + Chr2:4134291-4134310 MsG0280006618.01.T01:CDS 50.0%
CAAGGAACGAGCAACCTCTT+TGG - Chr2:4134293-4134312 None:intergenic 50.0%
CACCTGGGTTTGAGTCTTAC+GGG + Chr2:4136657-4136676 MsG0280006618.01.T01:CDS 50.0%
CAGTAGCGATCCAAGTGAAG+GGG + Chr2:4136721-4136740 MsG0280006618.01.T01:CDS 50.0%
CCATAAGCGACAGCTTGATG+TGG + Chr2:4135510-4135529 MsG0280006618.01.T01:CDS 50.0%
CCCAATTGCTTCCGTGACTA+GGG + Chr2:4136982-4137001 MsG0280006618.01.T01:intron 50.0%
CCCTAGTCACGGAAGCAATT+GGG - Chr2:4136985-4137004 None:intergenic 50.0%
CCTCGTCGGAGGAAAATCTT+AGG + Chr2:4133844-4133863 MsG0280006618.01.T01:CDS 50.0%
CCTGCAGGAACTATTCCAAG+GGG - Chr2:4134853-4134872 None:intergenic 50.0%
GATGTGGCTACCATCACACA+AGG + Chr2:4135526-4135545 MsG0280006618.01.T01:CDS 50.0%
GCACCTGGGTTTGAGTCTTA+CGG + Chr2:4136656-4136675 MsG0280006618.01.T01:CDS 50.0%
GGTGGTCGGAAGGAATTCAA+CGG + Chr2:4133679-4133698 MsG0280006618.01.T01:CDS 50.0%
GTTCTCGGATTCGTCTCTAG+TGG + Chr2:4133723-4133742 MsG0280006618.01.T01:CDS 50.0%
TAAGACTCAAACCCAGGTGC+AGG - Chr2:4136656-4136675 None:intergenic 50.0%
TAATGAGGCCACCCTAGTCA+CGG - Chr2:4136996-4137015 None:intergenic 50.0%
TCCCAATTGCTTCCGTGACT+AGG + Chr2:4136981-4137000 MsG0280006618.01.T01:intron 50.0%
TGATACCGCTGAAGCTCAGA+AGG + Chr2:4134606-4134625 MsG0280006618.01.T01:intron 50.0%
TGTGGCTACCATCACACAAG+GGG + Chr2:4135528-4135547 MsG0280006618.01.T01:CDS 50.0%
! CCACATCAAGCTGTCGCTTA+TGG - Chr2:4135513-4135532 None:intergenic 50.0%
! CCCTTCCTTTTCTAGGTCCT+TGG - Chr2:4137649-4137668 None:intergenic 50.0%
! CCTAAGATTTTCCTCCGACG+AGG - Chr2:4133847-4133866 None:intergenic 50.0%
! CGTTTTTAAACCCTCGTCGG+AGG + Chr2:4133833-4133852 MsG0280006618.01.T01:CDS 50.0%
! GTGTGAGCAGAAGGCTTTGA+TGG + Chr2:4137719-4137738 MsG0280006618.01.T01:CDS 50.0%
! GTTTCTTTTGTGCCTGCACC+TGG + Chr2:4136641-4136660 MsG0280006618.01.T01:CDS 50.0%
! TCTGGTTTCCCCTTGTGTGA+TGG - Chr2:4135539-4135558 None:intergenic 50.0%
!! GATGGTGAGGTTTTGGCAAG+AGG + Chr2:4137681-4137700 MsG0280006618.01.T01:CDS 50.0%
!! TTGGGGTGCTGAAGACACAA+TGG + Chr2:4136856-4136875 MsG0280006618.01.T01:CDS 50.0%
ACCAATCTCAGCCGGAAACC+CGG - Chr2:4133559-4133578 None:intergenic 55.0%
CCCCTTGGAATAGTTCCTGC+AGG + Chr2:4134850-4134869 MsG0280006618.01.T01:CDS 55.0%
CCGTCGGTGAGAAGAGCTAA+CGG - Chr2:4133651-4133670 None:intergenic 55.0%
GACGATCCATCTCCGGAAAG+TGG - Chr2:4133587-4133606 None:intergenic 55.0%
GATTGGTGGGGTCCACTTTC+CGG + Chr2:4133572-4133591 MsG0280006618.01.T01:five_prime_UTR 55.0%
GCAGTTCTCCGACGGTTATC+TGG + Chr2:4137360-4137379 MsG0280006618.01.T01:intron 55.0%
GCCGTTCTTGCCATCATTCG+AGG + Chr2:4135380-4135399 MsG0280006618.01.T01:CDS 55.0%
GGTTTCCGGCTGAGATTGGT+GGG + Chr2:4133559-4133578 MsG0280006618.01.T01:five_prime_UTR 55.0%
GTTTCCGGCTGAGATTGGTG+GGG + Chr2:4133560-4133579 MsG0280006618.01.T01:five_prime_UTR 55.0%
TAGCTCTTCTCACCGACGGT+AGG + Chr2:4133652-4133671 MsG0280006618.01.T01:CDS 55.0%
TCCCCGTAAGACTCAAACCC+AGG - Chr2:4136662-4136681 None:intergenic 55.0%
TCGGACCGAGTAACCGTCAA+CGG + Chr2:4133615-4133634 MsG0280006618.01.T01:CDS 55.0%
TTCTCACCGACGGTAGGCTA+TGG + Chr2:4133658-4133677 MsG0280006618.01.T01:CDS 55.0%
! CCGTTAGCTCTTCTCACCGA+CGG + Chr2:4133648-4133667 MsG0280006618.01.T01:CDS 55.0%
!! ACGGCATTGGCTATTGCGCA+AGG - Chr2:4135365-4135384 None:intergenic 55.0%
!! GAGGTTTTGGCAAGAGGGAG+AGG + Chr2:4137687-4137706 MsG0280006618.01.T01:CDS 55.0%
ACCGGGTTTCCGGCTGAGAT+TGG + Chr2:4133555-4133574 MsG0280006618.01.T01:five_prime_UTR 60.0%
CCGAGTAACCGTCAACGGCA+CGG + Chr2:4133620-4133639 MsG0280006618.01.T01:CDS 60.0%
CGACCACCATAGCCTACCGT+CGG - Chr2:4133667-4133686 None:intergenic 60.0%
CGACGGTAGGCTATGGTGGT+CGG + Chr2:4133665-4133684 MsG0280006618.01.T01:CDS 60.0%
GAGTCTACCAGCTTCACCGG+TGG - Chr2:4133799-4133818 None:intergenic 60.0%
GGAACCTGGTACACGCACCA+AGG + Chr2:4137629-4137648 MsG0280006618.01.T01:CDS 60.0%
GGGTTTCCGGCTGAGATTGG+TGG + Chr2:4133558-4133577 MsG0280006618.01.T01:five_prime_UTR 60.0%
GGTAGGCTATGGTGGTCGGA+AGG + Chr2:4133669-4133688 MsG0280006618.01.T01:CDS 60.0%
GTTGGCAGACAGCCTACAGC+AGG - Chr2:4136592-4136611 None:intergenic 60.0%
TCACCGACGGTAGGCTATGG+TGG + Chr2:4133661-4133680 MsG0280006618.01.T01:CDS 60.0%
TGGACCCCACCAATCTCAGC+CGG - Chr2:4133567-4133586 None:intergenic 60.0%
TGGGGTCCACTTTCCGGAGA+TGG + Chr2:4133578-4133597 MsG0280006618.01.T01:exon 60.0%
! AGGTCCTTGGTGCGTGTACC+AGG - Chr2:4137636-4137655 None:intergenic 60.0%
! CCGTGCCGTTGACGGTTACT+CGG - Chr2:4133623-4133642 None:intergenic 60.0%
CGTGACGGTTGCTGCTCCAC+CGG + Chr2:4133780-4133799 MsG0280006618.01.T01:CDS 65.0%
GGGGAGTCCAGCAGTTACCC+AGG + Chr2:4136677-4136696 MsG0280006618.01.T01:CDS 65.0%
TGCTGCTCCACCGGTGAAGC+TGG + Chr2:4133789-4133808 MsG0280006618.01.T01:CDS 65.0%
! CGGCGTTACCGTGCCGTTGA+CGG - Chr2:4133631-4133650 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 4133358 4138004 4133358 ID=MsG0280006618.01;Name=MsG0280006618.01
Chr2 mRNA 4133358 4138004 4133358 ID=MsG0280006618.01.T01;Parent=MsG0280006618.01;Name=MsG0280006618.01.T01;_AED=0.30;_eAED=0.31;_QI=239|0.6|0.63|1|0.6|0.72|11|201|537
Chr2 exon 4133358 4133906 4133358 ID=MsG0280006618.01.T01:exon:1849;Parent=MsG0280006618.01.T01
Chr2 exon 4134062 4134184 4134062 ID=MsG0280006618.01.T01:exon:1850;Parent=MsG0280006618.01.T01
Chr2 exon 4134269 4134387 4134269 ID=MsG0280006618.01.T01:exon:1851;Parent=MsG0280006618.01.T01
Chr2 exon 4134799 4134904 4134799 ID=MsG0280006618.01.T01:exon:1852;Parent=MsG0280006618.01.T01
Chr2 exon 4135315 4135401 4135315 ID=MsG0280006618.01.T01:exon:1853;Parent=MsG0280006618.01.T01
Chr2 exon 4135509 4135586 4135509 ID=MsG0280006618.01.T01:exon:1854;Parent=MsG0280006618.01.T01
Chr2 exon 4135692 4135766 4135692 ID=MsG0280006618.01.T01:exon:1855;Parent=MsG0280006618.01.T01
Chr2 exon 4135994 4136097 4135994 ID=MsG0280006618.01.T01:exon:1856;Parent=MsG0280006618.01.T01
Chr2 exon 4136599 4136895 4136599 ID=MsG0280006618.01.T01:exon:1857;Parent=MsG0280006618.01.T01
Chr2 exon 4137364 4137486 4137364 ID=MsG0280006618.01.T01:exon:1858;Parent=MsG0280006618.01.T01
Chr2 exon 4137612 4138004 4137612 ID=MsG0280006618.01.T01:exon:1859;Parent=MsG0280006618.01.T01
Chr2 five_prime_UTR 4133358 4133596 4133358 ID=MsG0280006618.01.T01:five_prime_utr;Parent=MsG0280006618.01.T01
Chr2 CDS 4133597 4133906 4133597 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4134062 4134184 4134062 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4134269 4134387 4134269 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4134799 4134904 4134799 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4135315 4135401 4135315 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4135509 4135586 4135509 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4135692 4135766 4135692 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4135994 4136097 4135994 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4136599 4136895 4136599 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4137364 4137486 4137364 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 CDS 4137612 4137803 4137612 ID=MsG0280006618.01.T01:cds;Parent=MsG0280006618.01.T01
Chr2 three_prime_UTR 4137804 4138004 4137804 ID=MsG0280006618.01.T01:three_prime_utr;Parent=MsG0280006618.01.T01
Gene Sequence

>MsG0280006618.01.T01

ATGGATCGTCCTTTATTTTCGGACCGAGTAACCGTCAACGGCACGGTAACGCCGTTAGCTCTTCTCACCGACGGTAGGCTATGGTGGTCGGAAGGAATTCAACGGTGTCTCTCCGTTGAAAAAGAGGTTCTCGGATTCGTCTCTAGTGGTTCATACATCAAACTCAAGACTCTTGTGGAAGCTCGTGACGGTTGCTGCTCCACCGGTGAAGCTGGTAGACTCGTTCGTAACGACGTCGTTTTTAAACCCTCGTCGGAGGAAAATCTTAGGCTTTGGTGCCTGAAGCTTCATGAATTTATTGATTCTCTCGGTCGACCAAAGAAATTGCTAGTTTTTGTGAATCCATTTGGTGGGAAGAAATGTGCTGTCAAGATTTTTGCTGAACAAGTTAAACCACTTTTTGATGATGCTCAAATTCAACTCACTATACAAGAAACTAAACATCAGCTACATGCCAAAGAGGTTGCTCGTTCCTTGGATATTTCAAAGCACGATGGAATTGTTTGTATTAGTGGAGATGGAATTTTGGTTGAGGTTAGTTTCTTTATCATTGTTGTAAACGGGCTTCTTCAAAGAGAGGATTGGGATACAGCAATAAAGACGCCCCTTGGAATAGTTCCTGCAGGTTTATTTCTTGTTTCATTTTATGTTTTCTTGAGTACTGGAAATGGCATGGCAAAATCTCTGCTTGATTCAGTTGGTGATCCTTGCGCAATAGCCAATGCCGTTCTTGCCATCATTCGAGGCCATAAGCGACAGCTTGATGTGGCTACCATCACACAAGGGGAAACCAGATTTTTCAGTATATTGATGTTGGCATGGGGTCTAATTGCTGATATTGACATAGAGTCTGAAAAGTATCGGTGGATGGGAAGTGCTCGTCTAGATTTTTATGTTATTCTGGGTGTTTTACTGTCCAAGTTTGTTTGTGATTTTAAGTTGAATGCTTTGGATTACTTAGGGCGCATGAAATGTACGTTTGATTTCTTCGGATTACTTAAGGCTGTCTGCCAACTCTTCAATTTGAGGCTATACAATGGATCTGTTTCTTTTGTGCCTGCACCTGGGTTTGAGTCTTACGGGGAGTCCAGCAGTTACCCAGGCAAATCTACTATTAGAGGGAACAGTAGCGATCCAAGTGAAGGGGAACATGTTAATTTGCAAACACTTTGTTATCAAGGACCTGAAATAAACTTGGAAAATATGAATTGGAGAGTTATAAATGGACCCTTTATTAGTGTCTGGGTTCACAATGTACCTTGGGGTGCTGAAGACACAATGGCAGCACCAGATGCAAAGTTCTCCGACGGTTATCTGGACTTGATCATTACGAAGAATTGCCCGAAGTTACATTTGTTGTCAATGATGTCAGAGCTGAATAAGGGAGGACACGTGAAATCTCCGTATGTCACGTACCTAAAGGTGAAAGCTTTCAGCTTGGAACCTGGTACACGCACCAAGGACCTAGAAAAGGAAGGGATCATAGATTCAGATGGTGAGGTTTTGGCAAGAGGGAGAGGAACCTACAAGTGTGAGCAGAAGGCTTTGATGGCCTATGATAAATTGCAGATAACAGTGGATAAAGGTTTAGCTACACTTTTTACCCCTATGTAA
Protein sequence

>MsG0280006618.01.T01

MDRPLFSDRVTVNGTVTPLALLTDGRLWWSEGIQRCLSVEKEVLGFVSSGSYIKLKTLVEARDGCCSTGEAGRLVRNDVVFKPSSEENLRLWCLKLHEFIDSLGRPKKLLVFVNPFGGKKCAVKIFAEQVKPLFDDAQIQLTIQETKHQLHAKEVARSLDISKHDGIVCISGDGILVEVSFFIIVVNGLLQREDWDTAIKTPLGIVPAGLFLVSFYVFLSTGNGMAKSLLDSVGDPCAIANAVLAIIRGHKRQLDVATITQGETRFFSILMLAWGLIADIDIESEKYRWMGSARLDFYVILGVLLSKFVCDFKLNALDYLGRMKCTFDFFGLLKAVCQLFNLRLYNGSVSFVPAPGFESYGESSSYPGKSTIRGNSSDPSEGEHVNLQTLCYQGPEINLENMNWRVINGPFISVWVHNVPWGAEDTMAAPDAKFSDGYLDLIITKNCPKLHLLSMMSELNKGGHVKSPYVTYLKVKAFSLEPGTRTKDLEKEGIIDSDGEVLARGRGTYKCEQKALMAYDKLQITVDKGLATLFTPM*