AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007655.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007655.01.T01 MTR_2g029460 92.523 214 16 0 288 501 1 214 4.68e-145 414
MsG0280007655.01.T01 MTR_4g051380 88.446 251 10 1 1 232 1 251 3.20e-144 421
MsG0280007655.01.T01 MTR_0002s0760 73.705 251 44 2 1 232 1 248 8.98e-124 369
MsG0280007655.01.T01 MTR_1g070860 63.483 178 21 2 71 204 5 182 2.72e-63 206
MsG0280007655.01.T01 MTR_3g108030 92.857 112 8 0 1 112 1 112 1.17e-56 185
MsG0280007655.01.T01 MTR_2g101550 88.172 93 11 0 20 112 11 103 2.15e-42 147
MsG0280007655.01.T01 MTR_1g086890 37.267 161 94 3 320 477 88 244 1.08e-26 108
MsG0280007655.01.T01 MTR_1g086880 37.267 161 94 3 320 477 96 252 4.22e-25 104
MsG0280007655.01.T01 MTR_2g087550 93.103 58 4 0 41 98 112 169 1.56e-21 93.2
MsG0280007655.01.T01 MTR_2g029470 33.163 196 112 6 294 475 8 198 2.87e-20 89.4
MsG0280007655.01.T01 MTR_2g025030 89.091 55 6 0 58 112 18 72 8.01e-18 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007655.01.T01 ATCG00740 82.787 122 21 0 111 232 21 142 7.11e-66 216
MsG0280007655.01.T01 ATCG00750 84.821 112 17 0 1 112 1 112 3.21e-57 187

Find 94 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGATATCAAGAGCCTTAA+TGG 0.203262 2:-18611906 None:intergenic
TCTGCATTTAGCAACGTAAT+TGG 0.232203 2:+18612310 MsG0280007655.01.T01:CDS
GCGCTTAGTAATTGCGTCTT+TGG 0.256495 2:-18612074 None:intergenic
GACAGTAAGTGTCTTTATTA+TGG 0.260137 2:+18606423 MsG0280007655.01.T01:intron
TACGAGGTCGGGTGATTTCT+TGG 0.271646 2:+18605997 MsG0280007655.01.T01:CDS
GCAAAATCTATACCGAAAAT+TGG 0.283815 2:+18605864 MsG0280007655.01.T01:CDS
CAGTGGCATTGCCAATTAAA+AGG 0.315808 2:-18611751 None:intergenic
CCCTTCAAATGAATCCTTGC+AGG 0.317529 2:-18612149 None:intergenic
GGATCAATACGGCATGATAT+TGG 0.347199 2:+18612036 MsG0280007655.01.T01:CDS
CGAGCAGAAGTCATAATAAA+AGG 0.347492 2:+18606128 MsG0280007655.01.T01:CDS
GAGTATTCTTGATCCCATTA+AGG 0.356937 2:+18611892 MsG0280007655.01.T01:CDS
GAAACTCGGCTTAAGTGGTT+TGG 0.370978 2:+18607001 MsG0280007655.01.T01:CDS
TGCCGGTTCGTGTGGATTCA+AGG 0.378174 2:+18606025 MsG0280007655.01.T01:CDS
TGATTCTTGAATACCTACTA+TGG 0.387415 2:-18606583 None:intergenic
TGAACTGAGATCTGGCTTCA+TGG 0.393192 2:-18612102 None:intergenic
TTCTGATGCTTTGTTTCAGT+TGG 0.396301 2:+18612204 MsG0280007655.01.T01:CDS
TGAACATAAATAACTCCCTT+TGG 0.411691 2:-18605936 None:intergenic
TTGCAGAAATTCAAGAGATC+AGG 0.414109 2:-18611815 None:intergenic
TCTATTTGTTTCAAAGGTCC+TGG 0.419595 2:+18606675 MsG0280007655.01.T01:CDS
AAACTCGGCTTAAGTGGTTT+GGG 0.423877 2:+18607002 MsG0280007655.01.T01:CDS
AGGCATCTCAAAATCTTTCA+AGG 0.436896 2:+18611994 MsG0280007655.01.T01:CDS
GTGATTTCTTGGTCCTCTGC+CGG 0.438446 2:+18606008 MsG0280007655.01.T01:CDS
AACCTTGAATCCACACGAAC+CGG 0.439182 2:-18606027 None:intergenic
GCCTGCAAGGATTCATTTGA+AGG 0.454195 2:+18612148 MsG0280007655.01.T01:CDS
TCGATATCAAGAGCCTTAAT+GGG 0.458149 2:-18611905 None:intergenic
AAAGGTCAAGCAGATACAAT+AGG 0.466912 2:+18606471 MsG0280007655.01.T01:CDS
CATGCATATTCTACCATAGT+AGG 0.469521 2:+18606570 MsG0280007655.01.T01:CDS
GCTGCGGTTTGAGCGGCAAA+TGG 0.471056 2:-18606065 None:intergenic
TCTGATGCTTTGTTTCAGTT+GGG 0.480185 2:+18612205 MsG0280007655.01.T01:CDS
TGCCGCATCTCTTCCTAGAC+AGG 0.482337 2:-18606153 None:intergenic
TGGTGGAAACTCGGCTTAAG+TGG 0.484971 2:+18606996 MsG0280007655.01.T01:CDS
TCTGCTTGACCTTTCCTAAG+TGG 0.488235 2:-18606462 None:intergenic
GCTTAAGTGGTTTGGGCATG+TGG 0.489123 2:+18607009 MsG0280007655.01.T01:CDS
GACGCATCTATTTGTTTCAA+AGG 0.491757 2:+18606669 MsG0280007655.01.T01:CDS
TGGTCCTCTGCCGGTTCGTG+TGG 0.493492 2:+18606017 MsG0280007655.01.T01:CDS
ATAATAAAAGGTCCCTGTCT+AGG 0.496703 2:+18606140 MsG0280007655.01.T01:CDS
CGGTTTGTTCACAAAGGGTA+GGG 0.497594 2:-18611850 None:intergenic
GCTTTATTCTGTCTCCACTT+AGG 0.498234 2:+18606448 MsG0280007655.01.T01:CDS
GTATTGAAAAGTAATCTGTA+TGG 0.506577 2:+18606639 MsG0280007655.01.T01:CDS
AACATCTATAGTAGAAAAGA+TGG 0.507028 2:+18606976 MsG0280007655.01.T01:CDS
AACAGCACTGAACTGAGATC+TGG 0.507977 2:-18612110 None:intergenic
ATCAGAATCATGAGCGAGGA+GGG 0.514399 2:-18612188 None:intergenic
TGGATTCAAGGTTACACAAA+GGG 0.515614 2:+18606037 MsG0280007655.01.T01:CDS
GAAGGAGGTGATGGTGTCAT+TGG 0.528779 2:-18612289 None:intergenic
TCTTGAGCAGTTACATATCC+AGG 0.530245 2:-18606693 None:intergenic
GAATCCACACGAACCGGCAG+AGG 0.534825 2:-18606021 None:intergenic
ATTTGCTGCTGCGGTTTGAG+CGG 0.537769 2:-18606072 None:intergenic
TGTTACAGATGTACGAGGTC+GGG 0.542457 2:+18605986 MsG0280007655.01.T01:CDS
TCGAATAGCATTTGCTGCTG+CGG 0.548528 2:-18606081 None:intergenic
TAGAAAAGATGGTGGAAACT+CGG 0.549653 2:+18606987 MsG0280007655.01.T01:CDS
ATTCGAATAGTAGTAGATCA+AGG 0.551104 2:+18606098 MsG0280007655.01.T01:CDS
ATCATACCATGCAGCCTGCA+AGG 0.552082 2:+18612135 MsG0280007655.01.T01:CDS
TAAAATATTAGAGAGAGTTG+AGG 0.561791 2:+18606952 MsG0280007655.01.T01:CDS
CAACCTCGTAAAATACCAAA+GGG 0.564032 2:+18605921 MsG0280007655.01.T01:CDS
ATGAATCCTTGCAGGCTGCA+TGG 0.565368 2:-18612141 None:intergenic
ACGGTTTGTTCACAAAGGGT+AGG 0.565665 2:-18611851 None:intergenic
ATTCTGTCTCCACTTAGGAA+AGG 0.567244 2:+18606453 MsG0280007655.01.T01:CDS
CTGTTACAGATGTACGAGGT+CGG 0.568051 2:+18605985 MsG0280007655.01.T01:CDS
TCAGTTGGGAGGAAACTGCT+TGG 0.568800 2:+18612219 MsG0280007655.01.T01:CDS
GACATATGCAAGGATCAATA+CGG 0.570480 2:+18612025 MsG0280007655.01.T01:CDS
AAAGTAATCTGTATGGAACT+CGG 0.573319 2:+18606646 MsG0280007655.01.T01:CDS
AAGTAATCTGTATGGAACTC+GGG 0.575584 2:+18606647 MsG0280007655.01.T01:CDS
GATGCTTTGTTTCAGTTGGG+AGG 0.576663 2:+18612208 MsG0280007655.01.T01:CDS
TCAACGATTTCCACCGAAGG+TGG 0.581752 2:-18606726 None:intergenic
TTAAGAGCTATTCGTAGAAG+TGG 0.582279 2:+18606176 MsG0280007655.01.T01:CDS
CAATTAAAAGGAATGAGACA+AGG 0.582929 2:-18611739 None:intergenic
GCTGACTTAGAAAATTCTCA+AGG 0.586516 2:+18612250 MsG0280007655.01.T01:CDS
CTTGATGAAGTGTGGTTGAA+CGG 0.587440 2:-18611870 None:intergenic
AAGACGCAATTACTAAGCGC+TGG 0.607592 2:+18612077 MsG0280007655.01.T01:CDS
AAAAGCTCTTGTTGTCATTG+GGG 0.610204 2:+18611955 MsG0280007655.01.T01:CDS
GTTGAACGGTTTGTTCACAA+AGG 0.610368 2:-18611856 None:intergenic
ACAACCTCGTAAAATACCAA+AGG 0.613685 2:+18605920 MsG0280007655.01.T01:CDS
TTGAACGGTTTGTTCACAAA+GGG 0.614939 2:-18611855 None:intergenic
ATCTATAGTAGAAAAGATGG+TGG 0.624269 2:+18606979 MsG0280007655.01.T01:CDS
CTAAATGCAGAAGGAGGTGA+TGG 0.624840 2:-18612298 None:intergenic
CCTGCAAGGATTCATTTGAA+GGG 0.627153 2:+18612149 MsG0280007655.01.T01:CDS
TCCCTGTCTAGGAAGAGATG+CGG 0.627952 2:+18606151 MsG0280007655.01.T01:CDS
GGATTCTCTTGACATATGCA+AGG 0.631254 2:+18612015 MsG0280007655.01.T01:CDS
CATCAGAATCATGAGCGAGG+AGG 0.633520 2:-18612189 None:intergenic
TTAGATTGTGATGTACGACA+TGG 0.635997 2:-18611790 None:intergenic
ATTACGTTGCTAAATGCAGA+AGG 0.636348 2:-18612307 None:intergenic
GGATTCAAGGTTACACAAAG+GGG 0.645732 2:+18606038 MsG0280007655.01.T01:CDS
TTATCAACGATTTCCACCGA+AGG 0.651558 2:-18606729 None:intergenic
GCCGCATCTCTTCCTAGACA+GGG 0.657183 2:-18606152 None:intergenic
GTGGATTCAAGGTTACACAA+AGG 0.658631 2:+18606036 MsG0280007655.01.T01:CDS
AATTAAAAGGAATGAGACAA+GGG 0.661952 2:-18611738 None:intergenic
TACATCTGTAACAGTCACAA+TGG 0.664770 2:-18605976 None:intergenic
AGAATACTCTTGATGAAGTG+TGG 0.683612 2:-18611878 None:intergenic
AAGCATCAGAATCATGAGCG+AGG 0.689591 2:-18612192 None:intergenic
ACGTTGCTAAATGCAGAAGG+AGG 0.703251 2:-18612304 None:intergenic
GATTCAAGGTTACACAAAGG+GGG 0.710878 2:+18606039 MsG0280007655.01.T01:CDS
ACTATGGTAGAATATGCATG+TGG 0.730304 2:-18606567 None:intergenic
GATATCGTGAGACTCAGCAG+TGG 0.748498 2:-18611768 None:intergenic
GTGACTGTTACAGATGTACG+AGG 0.777212 2:+18605981 MsG0280007655.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATACAATGAAAAAA+TGG - Chr2:18611602-18611621 None:intergenic 10.0%
!! ATTCATATACTTATAATAAT+AGG + Chr2:18607768-18607787 MsG0280007655.01.T01:intron 10.0%
!! GTATACTATTAAAATTTATA+CGG + Chr2:18606198-18606217 MsG0280007655.01.T01:intron 10.0%
!! TATACTATTAAAATTTATAC+GGG + Chr2:18606199-18606218 MsG0280007655.01.T01:intron 10.0%
!!! ATAATAATTTGTATTCTATT+TGG - Chr2:18611506-18611525 None:intergenic 10.0%
!!! ATGATTTTTTGAAATATTAA+CGG - Chr2:18608680-18608699 None:intergenic 10.0%
!!! TTATAATATCTTTTTATTTG+TGG + Chr2:18607314-18607333 MsG0280007655.01.T01:intron 10.0%
!! AAAAGAAAACAACATAATTA+AGG - Chr2:18611173-18611192 None:intergenic 15.0%
!! AAATGGATAATGATAAATAT+AGG - Chr2:18611585-18611604 None:intergenic 15.0%
!! AAGTAAAATATAAATTTGTG+AGG + Chr2:18608244-18608263 MsG0280007655.01.T01:intron 15.0%
!! AATGTATATCTAGTTATTAT+TGG - Chr2:18611562-18611581 None:intergenic 15.0%
!! ATAATTCACTTCATATTATA+AGG + Chr2:18609742-18609761 MsG0280007655.01.T01:intron 15.0%
!! ATTTGGATAATTTACTTTAA+AGG + Chr2:18607999-18608018 MsG0280007655.01.T01:intron 15.0%
!! GATAACATAAAATAAAGATT+TGG - Chr2:18610953-18610972 None:intergenic 15.0%
!! TATAAAAAAATTATCCTTCT+TGG - Chr2:18609889-18609908 None:intergenic 15.0%
!! TATACTTATAATAATAGGAA+AGG + Chr2:18607773-18607792 MsG0280007655.01.T01:intron 15.0%
!! TATTATTTATATAGTCCTAA+AGG - Chr2:18607521-18607540 None:intergenic 15.0%
!!! AATTTTTTTTTTTTTAGGCA+AGG - Chr2:18607861-18607880 None:intergenic 15.0%
!!! TCATATCTTATTTTATCTTA+TGG + Chr2:18607604-18607623 MsG0280007655.01.T01:intron 15.0%
!! AAAAAACCTGATATGAAATT+AGG - Chr2:18609122-18609141 None:intergenic 20.0%
!! AAGAAAGACATAGAAATTAA+TGG + Chr2:18607135-18607154 MsG0280007655.01.T01:intron 20.0%
!! AATATCTTTCAAAGAATGTT+TGG - Chr2:18608506-18608525 None:intergenic 20.0%
!! AATCGTTTATTAGTGATATT+AGG + Chr2:18610714-18610733 MsG0280007655.01.T01:intron 20.0%
!! AATTCTAACATTTGAATTTG+TGG - Chr2:18607751-18607770 None:intergenic 20.0%
!! ATAAAACTAGTTATAACCAA+TGG - Chr2:18611446-18611465 None:intergenic 20.0%
!! ATATTTATGTGCATTGAATT+TGG + Chr2:18609435-18609454 MsG0280007655.01.T01:intron 20.0%
!! CAGCAATAAAGTAAATATTT+AGG - Chr2:18611034-18611053 None:intergenic 20.0%
!! CTTCAAAAAATAAATTTGTG+AGG + Chr2:18606781-18606800 MsG0280007655.01.T01:CDS 20.0%
!! GAATTAAAACATACATAAAC+TGG - Chr2:18610412-18610431 None:intergenic 20.0%
!! GTAACAAACTACAAAAATTA+GGG - Chr2:18610218-18610237 None:intergenic 20.0%
!! GTTTATTAGAACAATTCAAT+AGG - Chr2:18610673-18610692 None:intergenic 20.0%
!! TGTAACAAACTACAAAAATT+AGG - Chr2:18610219-18610238 None:intergenic 20.0%
!! TTGAATTGTTCTAATAAACA+TGG + Chr2:18610674-18610693 MsG0280007655.01.T01:intron 20.0%
!!! AAAAAGTTAAAGTATCTACT+CGG + Chr2:18606367-18606386 MsG0280007655.01.T01:intron 20.0%
!!! AAATAGATGTTTTAAACTCA+TGG + Chr2:18609696-18609715 MsG0280007655.01.T01:intron 20.0%
!!! AGAATAAATTTTTTAAGGGT+TGG + Chr2:18607384-18607403 MsG0280007655.01.T01:intron 20.0%
!!! CAGCAGAATAAATTTTTTAA+GGG + Chr2:18607380-18607399 MsG0280007655.01.T01:intron 20.0%
!!! CATCTAGTTTTTTTTTTTGA+AGG + Chr2:18607266-18607285 MsG0280007655.01.T01:intron 20.0%
!!! CTAAAAGAATCAAAGTATTT+GGG + Chr2:18608901-18608920 MsG0280007655.01.T01:intron 20.0%
!!! CTCACAAATTTATTTTTTGA+AGG - Chr2:18606783-18606802 None:intergenic 20.0%
!!! CTTTTCTTGTTATAAAGTTT+TGG + Chr2:18611188-18611207 MsG0280007655.01.T01:intron 20.0%
!!! TCAGCAGAATAAATTTTTTA+AGG + Chr2:18607379-18607398 MsG0280007655.01.T01:intron 20.0%
!!! TTTTTAATTTGTCTAAAGAC+TGG + Chr2:18608269-18608288 MsG0280007655.01.T01:intron 20.0%
! AAAAATTGAGGCTAACTTTA+CGG - Chr2:18607696-18607715 None:intergenic 25.0%
! AAACTAAACGATCTTAGTTA+TGG - Chr2:18608116-18608135 None:intergenic 25.0%
! AAAGGATGAAATAGTTGTTT+GGG + Chr2:18608017-18608036 MsG0280007655.01.T01:intron 25.0%
! AAATATCAGAACTAACATTG+AGG - Chr2:18607889-18607908 None:intergenic 25.0%
! AAATTATCCTTCTTGGTTAA+AGG - Chr2:18609882-18609901 None:intergenic 25.0%
! AACATCTATAGTAGAAAAGA+TGG + Chr2:18606976-18606995 MsG0280007655.01.T01:CDS 25.0%
! AAGCAACTCATATTAACTAA+CGG - Chr2:18609588-18609607 None:intergenic 25.0%
! AATTAAAAGGAATGAGACAA+GGG - Chr2:18611741-18611760 None:intergenic 25.0%
! AATTATCCTTCTTGGTTAAA+GGG - Chr2:18609881-18609900 None:intergenic 25.0%
! AATTTGTATTCTATTTGGAG+TGG - Chr2:18611501-18611520 None:intergenic 25.0%
! ACAGCATAAGATATCAATTA+GGG - Chr2:18610516-18610535 None:intergenic 25.0%
! AGACATAGAAATTAATGGTT+TGG + Chr2:18607140-18607159 MsG0280007655.01.T01:intron 25.0%
! ATACATAAACTGGTAAAGAA+TGG - Chr2:18610402-18610421 None:intergenic 25.0%
! ATATAATCCAGCCATTTATA+GGG - Chr2:18609943-18609962 None:intergenic 25.0%
! ATTGAAGATTGAGATTTCTT+GGG - Chr2:18609799-18609818 None:intergenic 25.0%
! ATTGTAATTATATGTGTCGA+TGG + Chr2:18608707-18608726 MsG0280007655.01.T01:intron 25.0%
! CAATATGATTAACAGAGATA+TGG - Chr2:18609774-18609793 None:intergenic 25.0%
! CATATCTCTGTTAATCATAT+TGG + Chr2:18609772-18609791 MsG0280007655.01.T01:intron 25.0%
! CTTCTCTTATTCTATTATTC+TGG + Chr2:18611325-18611344 MsG0280007655.01.T01:intron 25.0%
! GAATAATAGAATAAGAGAAG+TGG - Chr2:18611325-18611344 None:intergenic 25.0%
! GATGTGACTTATTAATGTAA+TGG - Chr2:18607586-18607605 None:intergenic 25.0%
! GTATTGAAAAGTAATCTGTA+TGG + Chr2:18606639-18606658 MsG0280007655.01.T01:CDS 25.0%
! GTTTAAAAATGATAGAGGTT+TGG - Chr2:18611124-18611143 None:intergenic 25.0%
! TAAAATATTAGAGAGAGTTG+AGG + Chr2:18606952-18606971 MsG0280007655.01.T01:CDS 25.0%
! TAAAGGATGAAATAGTTGTT+TGG + Chr2:18608016-18608035 MsG0280007655.01.T01:intron 25.0%
! TATTCTACATCTTTCATCTA+AGG - Chr2:18607834-18607853 None:intergenic 25.0%
! TATTGAAGATTGAGATTTCT+TGG - Chr2:18609800-18609819 None:intergenic 25.0%
! TCTCTGTTTAAAAATGATAG+AGG - Chr2:18611129-18611148 None:intergenic 25.0%
! TTAAACTCATGGTTCATTAA+TGG + Chr2:18609707-18609726 MsG0280007655.01.T01:intron 25.0%
! TTATGTGTACGAATTGAATT+TGG - Chr2:18609053-18609072 None:intergenic 25.0%
! TTTACTACTTCGATAGTATT+TGG + Chr2:18611090-18611109 MsG0280007655.01.T01:intron 25.0%
!! AAAATTGGTTCACGTAAAAA+TGG + Chr2:18605879-18605898 MsG0280007655.01.T01:CDS 25.0%
!! ACTATTTTGTTAACTATCGT+GGG + Chr2:18610832-18610851 MsG0280007655.01.T01:intron 25.0%
!! GCTAAAAGAATCAAAGTATT+TGG + Chr2:18608900-18608919 MsG0280007655.01.T01:intron 25.0%
!! TAGCATTGAAGAAATTGAAA+AGG - Chr2:18611363-18611382 None:intergenic 25.0%
!! TCTCTCTAAGAAAAAAATTG+AGG - Chr2:18607708-18607727 None:intergenic 25.0%
!! TTTTACACACGTCTTTTTTT+AGG - Chr2:18606260-18606279 None:intergenic 25.0%
!! TTTTTACGTGAACCAATTTT+CGG - Chr2:18605879-18605898 None:intergenic 25.0%
!!! AGGTATTTTTGTTTAAAGAC+CGG + Chr2:18606801-18606820 MsG0280007655.01.T01:intron 25.0%
!!! CTTTATTTGTTGTAAGTACT+TGG + Chr2:18609912-18609931 MsG0280007655.01.T01:intron 25.0%
!!! GGATGTGTAAAAGTTATTTT+TGG - Chr2:18611013-18611032 None:intergenic 25.0%
!!! GTTATAACTAGTTTTATGAG+TGG + Chr2:18611449-18611468 MsG0280007655.01.T01:intron 25.0%
!!! TAGTTTTGCAATATTTCCAT+TGG + Chr2:18611427-18611446 MsG0280007655.01.T01:intron 25.0%
!!! TATTTTTTGAAGGTTCTGTT+AGG - Chr2:18606773-18606792 None:intergenic 25.0%
!!! TTTTGAAATATTAACGGTGT+CGG - Chr2:18608674-18608693 None:intergenic 25.0%
AAAATAAGTGTAGGAGAGAT+GGG + Chr2:18606874-18606893 MsG0280007655.01.T01:intron 30.0%
AAAGAACAGATAGCACATAA+TGG - Chr2:18609317-18609336 None:intergenic 30.0%
AAAGATTATTAGACCACCTA+AGG + Chr2:18610757-18610776 MsG0280007655.01.T01:intron 30.0%
AAAGTAATCTGTATGGAACT+CGG + Chr2:18606646-18606665 MsG0280007655.01.T01:CDS 30.0%
AACTGAAGAAACTGAAAAGA+AGG + Chr2:18610079-18610098 MsG0280007655.01.T01:intron 30.0%
AAGAGATGAGAATGTTACAT+TGG + Chr2:18608355-18608374 MsG0280007655.01.T01:intron 30.0%
AAGATTATTAGACCACCTAA+GGG + Chr2:18610758-18610777 MsG0280007655.01.T01:intron 30.0%
AATAATAGAGAGATGAGATC+AGG - Chr2:18610924-18610943 None:intergenic 30.0%
AATTTGTGGATATATAACCG+AGG - Chr2:18607737-18607756 None:intergenic 30.0%
ACAACATAATTAAGGAATGC+CGG - Chr2:18611165-18611184 None:intergenic 30.0%
ACTGAAGAAACTGAAAAGAA+GGG + Chr2:18610080-18610099 MsG0280007655.01.T01:intron 30.0%
AGAAGATCATTCATACGAAT+AGG + Chr2:18610858-18610877 MsG0280007655.01.T01:intron 30.0%
AGCTAAATCTCTTAGAGATT+AGG + Chr2:18610470-18610489 MsG0280007655.01.T01:intron 30.0%
ATAGGTGCAACATAACAATT+AGG + Chr2:18610876-18610895 MsG0280007655.01.T01:intron 30.0%
ATCTATAGTAGAAAAGATGG+TGG + Chr2:18606979-18606998 MsG0280007655.01.T01:CDS 30.0%
ATGATTAACAGAGATATGGT+AGG - Chr2:18609770-18609789 None:intergenic 30.0%
ATTACAAAGTCTATGGTGAA+TGG - Chr2:18611298-18611317 None:intergenic 30.0%
ATTCGAATAGTAGTAGATCA+AGG + Chr2:18606098-18606117 MsG0280007655.01.T01:CDS 30.0%
CAATTAAAAGGAATGAGACA+AGG - Chr2:18611742-18611761 None:intergenic 30.0%
CACAGCATAAGATATCAATT+AGG - Chr2:18610517-18610536 None:intergenic 30.0%
CACGAGAATAAAATAAGTGT+AGG + Chr2:18606865-18606884 MsG0280007655.01.T01:intron 30.0%
CAGAGACTATATCATAAAAC+CGG + Chr2:18611143-18611162 MsG0280007655.01.T01:intron 30.0%
CATATAATCCAGCCATTTAT+AGG - Chr2:18609944-18609963 None:intergenic 30.0%
CGAATTGAATTTGGAGATAT+TGG - Chr2:18609044-18609063 None:intergenic 30.0%
CGTGTTAGGATAGTTAAATT+TGG + Chr2:18607982-18608001 MsG0280007655.01.T01:intron 30.0%
CTATCATCACATTGAGAATT+GGG + Chr2:18609187-18609206 MsG0280007655.01.T01:intron 30.0%
CTGATGAATACACAATATGT+AGG - Chr2:18607349-18607368 None:intergenic 30.0%
GAATAGTCTTCAGCTTAAAT+AGG - Chr2:18610301-18610320 None:intergenic 30.0%
GACAGTAAGTGTCTTTATTA+TGG + Chr2:18606423-18606442 MsG0280007655.01.T01:intron 30.0%
GCAAAACTAAGAATAACTGA+TGG - Chr2:18611416-18611435 None:intergenic 30.0%
GCAAAATCTATACCGAAAAT+TGG + Chr2:18605864-18605883 MsG0280007655.01.T01:CDS 30.0%
TAAAATAAGTGTAGGAGAGA+TGG + Chr2:18606873-18606892 MsG0280007655.01.T01:intron 30.0%
TAAACGATCTTAGTTATGGA+TGG - Chr2:18608112-18608131 None:intergenic 30.0%
TAACAGAAGATTGTTTCAGA+GGG + Chr2:18609385-18609404 MsG0280007655.01.T01:intron 30.0%
TAGACGAGATAAATTTGTGT+AGG + Chr2:18608388-18608407 MsG0280007655.01.T01:intron 30.0%
TAGCTCATCTATTAAACAGA+TGG + Chr2:18607469-18607488 MsG0280007655.01.T01:intron 30.0%
TAGGTGCAACATAACAATTA+GGG + Chr2:18610877-18610896 MsG0280007655.01.T01:intron 30.0%
TATCATCACATTGAGAATTG+GGG + Chr2:18609188-18609207 MsG0280007655.01.T01:intron 30.0%
TGAACATAAATAACTCCCTT+TGG - Chr2:18605939-18605958 None:intergenic 30.0%
TGAATACACAATATGTAGGT+TGG - Chr2:18607345-18607364 None:intergenic 30.0%
TGATTAACAGAGATATGGTA+GGG - Chr2:18609769-18609788 None:intergenic 30.0%
TGATTCTTGAATACCTACTA+TGG - Chr2:18606586-18606605 None:intergenic 30.0%
TGCATTGAATTTGGAGATAT+TGG + Chr2:18609444-18609463 MsG0280007655.01.T01:intron 30.0%
TTGAAATCTCATAACTGATC+AGG + Chr2:18608191-18608210 MsG0280007655.01.T01:intron 30.0%
! AAAAAGCTCTTGTTGTCATT+GGG + Chr2:18611954-18611973 MsG0280007655.01.T01:CDS 30.0%
! AACAGAAGATTGTTTTCAGA+GGG + Chr2:18609357-18609376 MsG0280007655.01.T01:intron 30.0%
! AATGACAACAAGAGCTTTTT+GGG - Chr2:18611954-18611973 None:intergenic 30.0%
! AATTCATTTTGTCTCTTCTC+TGG - Chr2:18611688-18611707 None:intergenic 30.0%
! AGAATTTTCTAAGTCAGCAA+TGG - Chr2:18612248-18612267 None:intergenic 30.0%
! ATGGAAAAGTGTAAGAAACA+AGG - Chr2:18611632-18611651 None:intergenic 30.0%
! ATTCATTTTGTCTCTTCTCT+GGG - Chr2:18611687-18611706 None:intergenic 30.0%
! CTTGTCTCATTCCTTTTAAT+TGG + Chr2:18611740-18611759 MsG0280007655.01.T01:CDS 30.0%
! GAAGACTATTCTGAAAACAA+GGG + Chr2:18610310-18610329 MsG0280007655.01.T01:intron 30.0%
! GACTATTTTGTTAACTATCG+TGG + Chr2:18610831-18610850 MsG0280007655.01.T01:intron 30.0%
! GATAAATTTGTGTAGGCTTT+TGG + Chr2:18608395-18608414 MsG0280007655.01.T01:intron 30.0%
! TAACAGAAGATTGTTTTCAG+AGG + Chr2:18609356-18609375 MsG0280007655.01.T01:intron 30.0%
! TGAAGACTATTCTGAAAACA+AGG + Chr2:18610309-18610328 MsG0280007655.01.T01:intron 30.0%
! TGCATCACAAGTTTTACAAA+AGG - Chr2:18608576-18608595 None:intergenic 30.0%
!! CTAATAAACATGGTTAGTCT+AGG + Chr2:18610684-18610703 MsG0280007655.01.T01:intron 30.0%
!! CTAATGGTTGATTTGTTAGA+TGG - Chr2:18608968-18608987 None:intergenic 30.0%
!! GATTGCTCATTTTGAGAATT+TGG - Chr2:18609095-18609114 None:intergenic 30.0%
!! GTCATTGGTACTTCATTTTT+AGG - Chr2:18612277-18612296 None:intergenic 30.0%
!! GTTTTAGTCTTTCTATGACA+CGG + Chr2:18608803-18608822 MsG0280007655.01.T01:intron 30.0%
!! TTTTGAGGATTAGAGACAAA+TGG - Chr2:18611651-18611670 None:intergenic 30.0%
!!! ACTTTGATTCTTTTAGCTCA+TGG - Chr2:18608897-18608916 None:intergenic 30.0%
!!! GTGTCATTTTCATCACATTT+TGG + Chr2:18610007-18610026 MsG0280007655.01.T01:intron 30.0%
!!! TCATATCAGGTTTTTTTTCC+CGG + Chr2:18609126-18609145 MsG0280007655.01.T01:intron 30.0%
!!! TTCTGCTATTTTCTTCTTCA+AGG + Chr2:18609232-18609251 MsG0280007655.01.T01:intron 30.0%
!!! TTTTGAAGTAGTGAAGAGTT+TGG + Chr2:18608059-18608078 MsG0280007655.01.T01:intron 30.0%
AAAAAGACACTTGTGCATAG+TGG - Chr2:18607561-18607580 None:intergenic 35.0%
AAAACAAGGGTTACGAATTC+TGG + Chr2:18610323-18610342 MsG0280007655.01.T01:intron 35.0%
AAAGGTCAAGCAGATACAAT+AGG + Chr2:18606471-18606490 MsG0280007655.01.T01:CDS 35.0%
AAGAAACATGCATTCGACAT+TGG + Chr2:18610148-18610167 MsG0280007655.01.T01:intron 35.0%
AAGTAATCTGTATGGAACTC+GGG + Chr2:18606647-18606666 MsG0280007655.01.T01:CDS 35.0%
AATAAGTTGTGTCCTAGTGT+CGG - Chr2:18608760-18608779 None:intergenic 35.0%
ACAACCTCGTAAAATACCAA+AGG + Chr2:18605920-18605939 MsG0280007655.01.T01:CDS 35.0%
ACTAGGACACAACTTATTTG+AGG + Chr2:18608762-18608781 MsG0280007655.01.T01:intron 35.0%
ACTATGGTAGAATATGCATG+TGG - Chr2:18606570-18606589 None:intergenic 35.0%
ACTGAAAACATGTCACGATT+TGG + Chr2:18610118-18610137 MsG0280007655.01.T01:intron 35.0%
AGAATACTCTTGATGAAGTG+TGG - Chr2:18611881-18611900 None:intergenic 35.0%
AGACTAAAACCTATGAAGCA+CGG - Chr2:18608793-18608812 None:intergenic 35.0%
AGGCATCTCAAAATCTTTCA+AGG + Chr2:18611994-18612013 MsG0280007655.01.T01:CDS 35.0%
AGGTGCAACATAACAATTAG+GGG + Chr2:18610878-18610897 MsG0280007655.01.T01:intron 35.0%
AGTGGCAAATCCATATTATC+AGG + Chr2:18611467-18611486 MsG0280007655.01.T01:intron 35.0%
ATAATAAAAGGTCCCTGTCT+AGG + Chr2:18606140-18606159 MsG0280007655.01.T01:CDS 35.0%
ATCATCACATTGAGAATTGG+GGG + Chr2:18609189-18609208 MsG0280007655.01.T01:intron 35.0%
ATCCAATGGATGATATGGAA+AGG + Chr2:18608992-18609011 MsG0280007655.01.T01:intron 35.0%
ATCCAATGGATGATATGGAA+AGG - Chr2:18609011-18608992 None:intergenic 35.0%
ATGATAGCAACCAACAGAAT+GGG - Chr2:18609174-18609193 None:intergenic 35.0%
ATGTAGTCGATCCTATTTAG+TGG + Chr2:18607198-18607217 MsG0280007655.01.T01:intron 35.0%
ATTACGTTGCTAAATGCAGA+AGG - Chr2:18612310-18612329 None:intergenic 35.0%
CAACCATTAGATACATCCAA+TGG + Chr2:18608978-18608997 MsG0280007655.01.T01:intron 35.0%
CAACCATTAGATACATCCAA+TGG - Chr2:18608997-18608978 None:intergenic 35.0%
CAACCTCGTAAAATACCAAA+GGG + Chr2:18605921-18605940 MsG0280007655.01.T01:CDS 35.0%
CAAGCATTATCCCACTAAAT+AGG - Chr2:18607212-18607231 None:intergenic 35.0%
CATAAACTGGTAAAGAATGG+AGG - Chr2:18610399-18610418 None:intergenic 35.0%
CATCCATTGGATGTATCTAA+TGG + Chr2:18609506-18609525 MsG0280007655.01.T01:intron 35.0%
CATCCATTGGATGTATCTAA+TGG - Chr2:18609525-18609506 None:intergenic 35.0%
CATGCATATTCTACCATAGT+AGG + Chr2:18606570-18606589 MsG0280007655.01.T01:CDS 35.0%
CATTGGATGTATCTAATGGT+TGG + Chr2:18609510-18609529 MsG0280007655.01.T01:intron 35.0%
CGAGCAGAAGTCATAATAAA+AGG + Chr2:18606128-18606147 MsG0280007655.01.T01:CDS 35.0%
CTATTTAGTGGGATAATGCT+TGG + Chr2:18607210-18607229 MsG0280007655.01.T01:intron 35.0%
CTTAATCAATCCCTTGAGTT+AGG - Chr2:18610812-18610831 None:intergenic 35.0%
GACATATGCAAGGATCAATA+CGG + Chr2:18612025-18612044 MsG0280007655.01.T01:CDS 35.0%
GACGCATCTATTTGTTTCAA+AGG + Chr2:18606669-18606688 MsG0280007655.01.T01:CDS 35.0%
GAGTATTCTTGATCCCATTA+AGG + Chr2:18611892-18611911 MsG0280007655.01.T01:CDS 35.0%
GATACATCCAATGGATGATA+TGG + Chr2:18608987-18609006 MsG0280007655.01.T01:intron 35.0%
GATACATCCAATGGATGATA+TGG - Chr2:18609006-18608987 None:intergenic 35.0%
GCTATCATCACATTGAGAAT+TGG + Chr2:18609186-18609205 MsG0280007655.01.T01:intron 35.0%
GGTAGAATTCATTGATCCAA+CGG + Chr2:18607625-18607644 MsG0280007655.01.T01:intron 35.0%
GGTGGTCTAATAATCTTTGA+AGG - Chr2:18610755-18610774 None:intergenic 35.0%
GTAACAGAAGATTGTTTCAG+AGG + Chr2:18609384-18609403 MsG0280007655.01.T01:intron 35.0%
TAATAGGAAAGGTTAAGCGT+TGG + Chr2:18607784-18607803 MsG0280007655.01.T01:intron 35.0%
TACATCCATTATGTGGCATA+GGG - Chr2:18606232-18606251 None:intergenic 35.0%
TACATCTGTAACAGTCACAA+TGG - Chr2:18605979-18605998 None:intergenic 35.0%
TAGGTCTAAGTAGAAAGCTA+TGG - Chr2:18610654-18610673 None:intergenic 35.0%
TAGTTTCCCTTTAACCAAGA+AGG + Chr2:18609872-18609891 MsG0280007655.01.T01:intron 35.0%
TCAACAGTGGAATTTCCTTT+AGG + Chr2:18607503-18607522 MsG0280007655.01.T01:intron 35.0%
TCACGTAAAAATGGACGTAT+TGG + Chr2:18605888-18605907 MsG0280007655.01.T01:CDS 35.0%
TCAGTGCCTAATTTCATATC+AGG + Chr2:18609113-18609132 MsG0280007655.01.T01:intron 35.0%
TCGATATCAAGAGCCTTAAT+GGG - Chr2:18611908-18611927 None:intergenic 35.0%
TCTATTTGTTTCAAAGGTCC+TGG + Chr2:18606675-18606694 MsG0280007655.01.T01:CDS 35.0%
TCTGCATTTAGCAACGTAAT+TGG + Chr2:18612310-18612329 MsG0280007655.01.T01:CDS 35.0%
TGGAGACATTACAAAGTCTA+TGG - Chr2:18611305-18611324 None:intergenic 35.0%
TGGATTCAAGGTTACACAAA+GGG + Chr2:18606037-18606056 MsG0280007655.01.T01:CDS 35.0%
TGTAGTCGATCCTATTTAGT+GGG + Chr2:18607199-18607218 MsG0280007655.01.T01:intron 35.0%
TGTGATGCATCTTGTTACAT+TGG + Chr2:18608587-18608606 MsG0280007655.01.T01:intron 35.0%
TGTTGTATGAGATGAAGTGT+TGG + Chr2:18608295-18608314 MsG0280007655.01.T01:intron 35.0%
TTAACTATCCTAACACGTAC+TGG - Chr2:18607979-18607998 None:intergenic 35.0%
TTAAGAGCTATTCGTAGAAG+TGG + Chr2:18606176-18606195 MsG0280007655.01.T01:CDS 35.0%
TTAGATTGTGATGTACGACA+TGG - Chr2:18611793-18611812 None:intergenic 35.0%
TTCGATATCAAGAGCCTTAA+TGG - Chr2:18611909-18611928 None:intergenic 35.0%
TTGCAGAAATTCAAGAGATC+AGG - Chr2:18611818-18611837 None:intergenic 35.0%
TTTCTTATCCAGTACGTGTT+AGG + Chr2:18607968-18607987 MsG0280007655.01.T01:intron 35.0%
! AAAAGCTCTTGTTGTCATTG+GGG + Chr2:18611955-18611974 MsG0280007655.01.T01:CDS 35.0%
! AATCAAAGTATTTGGGCGTT+TGG + Chr2:18608908-18608927 MsG0280007655.01.T01:intron 35.0%
! AATGGAAGTGTGTTGAATCA+AGG + Chr2:18606397-18606416 MsG0280007655.01.T01:intron 35.0%
! AATTTTGCTCGGAGAAATAG+AGG + Chr2:18606509-18606528 MsG0280007655.01.T01:CDS 35.0%
! ACTTGGTTAGTCCCTATAAA+TGG + Chr2:18609929-18609948 MsG0280007655.01.T01:intron 35.0%
! AGACATCATTTTACCACCTT+CGG + Chr2:18606713-18606732 MsG0280007655.01.T01:CDS 35.0%
! ATGGAAGTGTGTTGAATCAA+GGG + Chr2:18606398-18606417 MsG0280007655.01.T01:intron 35.0%
! ATTTTGCTCGGAGAAATAGA+GGG + Chr2:18606510-18606529 MsG0280007655.01.T01:CDS 35.0%
! CAAAAAGCTCTTGTTGTCAT+TGG + Chr2:18611953-18611972 MsG0280007655.01.T01:CDS 35.0%
! CAATGACAACAAGAGCTTTT+TGG - Chr2:18611955-18611974 None:intergenic 35.0%
! CGTAGATTTTGTAGTAAGGA+GGG + Chr2:18607042-18607061 MsG0280007655.01.T01:intron 35.0%
! CTCATATTAACTAACGGATC+CGG - Chr2:18609582-18609601 None:intergenic 35.0%
! GACTCGTAGATTTTGTAGTA+AGG + Chr2:18607038-18607057 MsG0280007655.01.T01:intron 35.0%
! GCTGACTTAGAAAATTCTCA+AGG + Chr2:18612250-18612269 MsG0280007655.01.T01:CDS 35.0%
! GGATAATGCGTTGAATTTTG+AGG - Chr2:18611666-18611685 None:intergenic 35.0%
! TCGTAGATTTTGTAGTAAGG+AGG + Chr2:18607041-18607060 MsG0280007655.01.T01:intron 35.0%
! TCTTAGAGAGAAATTAGCCT+CGG + Chr2:18607717-18607736 MsG0280007655.01.T01:intron 35.0%
! TGTATTCTATTTGGAGTGGT+TGG - Chr2:18611497-18611516 None:intergenic 35.0%
! TTAAATCGTGCCACGATTTT+AGG + Chr2:18610264-18610283 MsG0280007655.01.T01:intron 35.0%
! TTGAACGGTTTGTTCACAAA+GGG - Chr2:18611858-18611877 None:intergenic 35.0%
!! AAACATGGTTAGTCTAGGAA+TGG + Chr2:18610689-18610708 MsG0280007655.01.T01:intron 35.0%
!! CTAATGGTTGGTTTGTTAGA+TGG + Chr2:18609522-18609541 MsG0280007655.01.T01:intron 35.0%
!! GGTTCTCTAAAATTCTTCAC+TGG + Chr2:18608212-18608231 MsG0280007655.01.T01:intron 35.0%
!! TAGAAAAGATGGTGGAAACT+CGG + Chr2:18606987-18607006 MsG0280007655.01.T01:CDS 35.0%
!! TATGCCACATAATGGATGTA+GGG + Chr2:18606232-18606251 MsG0280007655.01.T01:intron 35.0%
!! TCTGATGCTTTGTTTCAGTT+GGG + Chr2:18612205-18612224 MsG0280007655.01.T01:CDS 35.0%
!! TTCTGATGCTTTGTTTCAGT+TGG + Chr2:18612204-18612223 MsG0280007655.01.T01:CDS 35.0%
!!! CACAAATTAGTTTTCACCGT+TGG - Chr2:18607644-18607663 None:intergenic 35.0%
!!! CATATCAGGTTTTTTTTCCC+GGG + Chr2:18609127-18609146 MsG0280007655.01.T01:intron 35.0%
!!! GAGGGTTTTAAAATTGCTAG+AGG + Chr2:18607076-18607095 MsG0280007655.01.T01:intron 35.0%
!!! GGACTATTTTAACTCAACAG+TGG + Chr2:18607490-18607509 MsG0280007655.01.T01:intron 35.0%
!!! GTTATTTTTGGTTTGCCACT+AGG - Chr2:18611001-18611020 None:intergenic 35.0%
!!! TGGTTTTAGTCTATGAAGCA+TGG + Chr2:18608607-18608626 MsG0280007655.01.T01:intron 35.0%
!!! TTGAAAGATTTTGAGATGCC+TGG - Chr2:18611995-18612014 None:intergenic 35.0%
AAAATTGCTAGAGGCAACGA+AGG + Chr2:18607085-18607104 MsG0280007655.01.T01:intron 40.0%
AAACTCGGCTTAAGTGGTTT+GGG + Chr2:18607002-18607021 MsG0280007655.01.T01:CDS 40.0%
AAAGACCGGAGAAGTTGTAT+AGG + Chr2:18606815-18606834 MsG0280007655.01.T01:intron 40.0%
AACAACTGCTCCTAAAATCG+TGG - Chr2:18610277-18610296 None:intergenic 40.0%
ACATCCATTATGTGGCATAG+GGG - Chr2:18606231-18606250 None:intergenic 40.0%
AGCAGAATGAGTGATGATTG+TGG - Chr2:18609219-18609238 None:intergenic 40.0%
AGTTGTATAGGACGATGTGT+TGG + Chr2:18606827-18606846 MsG0280007655.01.T01:intron 40.0%
ATCGTCCTATACAACTTCTC+CGG - Chr2:18606823-18606842 None:intergenic 40.0%
ATGAAGCATGGATACGAACA+TGG + Chr2:18608619-18608638 MsG0280007655.01.T01:intron 40.0%
ATTAGACCACCTAAGGGATT+AGG + Chr2:18610764-18610783 MsG0280007655.01.T01:intron 40.0%
ATTATCCTTCCTCTACCTCA+AGG - Chr2:18608863-18608882 None:intergenic 40.0%
ATTCTGTCTCCACTTAGGAA+AGG + Chr2:18606453-18606472 MsG0280007655.01.T01:CDS 40.0%
CAAGCTTAAGCAGCAAGAAA+AGG + Chr2:18610040-18610059 MsG0280007655.01.T01:intron 40.0%
CAATCAAATCTACTGCCTAG+TGG + Chr2:18610983-18611002 MsG0280007655.01.T01:intron 40.0%
CAGATAGCACATAATGGTGA+TGG - Chr2:18609311-18609330 None:intergenic 40.0%
CAGTGGCATTGCCAATTAAA+AGG - Chr2:18611754-18611773 None:intergenic 40.0%
CCTGCAAGGATTCATTTGAA+GGG + Chr2:18612149-18612168 MsG0280007655.01.T01:CDS 40.0%
CTACATCCATTATGTGGCAT+AGG - Chr2:18606233-18606252 None:intergenic 40.0%
CTTGATGAAGTGTGGTTGAA+CGG - Chr2:18611873-18611892 None:intergenic 40.0%
GAGGTAGAGGAAGGATAATA+AGG + Chr2:18608864-18608883 MsG0280007655.01.T01:intron 40.0%
GATGATAGCAACCAACAGAA+TGG - Chr2:18609175-18609194 None:intergenic 40.0%
GATGTGAGCATAAATAACCC+GGG - Chr2:18609147-18609166 None:intergenic 40.0%
GATTCAAGGTTACACAAAGG+GGG + Chr2:18606039-18606058 MsG0280007655.01.T01:CDS 40.0%
GCAAAAACGTGACACGATTA+TGG + Chr2:18610189-18610208 MsG0280007655.01.T01:intron 40.0%
GGATCAATACGGCATGATAT+TGG + Chr2:18612036-18612055 MsG0280007655.01.T01:CDS 40.0%
GGATGTGAGCATAAATAACC+CGG - Chr2:18609148-18609167 None:intergenic 40.0%
GGATTCAAGGTTACACAAAG+GGG + Chr2:18606038-18606057 MsG0280007655.01.T01:CDS 40.0%
GGATTCTCTTGACATATGCA+AGG + Chr2:18612015-18612034 MsG0280007655.01.T01:CDS 40.0%
GGGGAGTTACTTAAAAAACC+AGG + Chr2:18611974-18611993 MsG0280007655.01.T01:CDS 40.0%
GGTAAAAGATATCAACCTGC+AGG + Chr2:18608416-18608435 MsG0280007655.01.T01:intron 40.0%
GTAAAAATATCGATCCCACG+AGG - Chr2:18611075-18611094 None:intergenic 40.0%
GTGGATTCAAGGTTACACAA+AGG + Chr2:18606036-18606055 MsG0280007655.01.T01:CDS 40.0%
TATCTACTCGGACACTACAA+TGG + Chr2:18606379-18606398 MsG0280007655.01.T01:intron 40.0%
TCTTGAGCAGTTACATATCC+AGG - Chr2:18606696-18606715 None:intergenic 40.0%
TGCCTTTCCATATCATCCAT+TGG + Chr2:18609493-18609512 MsG0280007655.01.T01:intron 40.0%
TGCCTTTCCATATCATCCAT+TGG - Chr2:18609512-18609493 None:intergenic 40.0%
TTAGACCACCTAAGGGATTA+GGG + Chr2:18610765-18610784 MsG0280007655.01.T01:intron 40.0%
TTATCAACGATTTCCACCGA+AGG - Chr2:18606732-18606751 None:intergenic 40.0%
TTATCCTTCCTCTACCTCAA+GGG - Chr2:18608862-18608881 None:intergenic 40.0%
! ACTCCCTTTGGTATTTTACG+AGG - Chr2:18605927-18605946 None:intergenic 40.0%
! AGATTTTGTAGTAAGGAGGG+TGG + Chr2:18607045-18607064 MsG0280007655.01.T01:intron 40.0%
! GAAGTGCTAGCTAGTAGAAA+AGG - Chr2:18607810-18607829 None:intergenic 40.0%
! GCAATGCGAAGAATTTTGCT+CGG + Chr2:18606498-18606517 MsG0280007655.01.T01:CDS 40.0%
! GCTTTATTCTGTCTCCACTT+AGG + Chr2:18606448-18606467 MsG0280007655.01.T01:CDS 40.0%
! GGTTGGTGTTCCTGATAATA+TGG - Chr2:18611480-18611499 None:intergenic 40.0%
! GTTGAACGGTTTGTTCACAA+AGG - Chr2:18611859-18611878 None:intergenic 40.0%
!! CTATGCCACATAATGGATGT+AGG + Chr2:18606231-18606250 MsG0280007655.01.T01:intron 40.0%
!! GGTTGATTTGTTAGATGGAG+AGG - Chr2:18608963-18608982 None:intergenic 40.0%
!! TTGGTATGACTTGCTTCGAT+TGG + Chr2:18608078-18608097 MsG0280007655.01.T01:intron 40.0%
AACCTTGAATCCACACGAAC+CGG - Chr2:18606030-18606049 None:intergenic 45.0%
AAGAAGAGGGTCCTAACTCA+AGG + Chr2:18610798-18610817 MsG0280007655.01.T01:intron 45.0%
AAGACGCAATTACTAAGCGC+TGG + Chr2:18612077-18612096 MsG0280007655.01.T01:CDS 45.0%
AAGCATCAGAATCATGAGCG+AGG - Chr2:18612195-18612214 None:intergenic 45.0%
ACGTTGCTAAATGCAGAAGG+AGG - Chr2:18612307-18612326 None:intergenic 45.0%
AGAAGAGGGTCCTAACTCAA+GGG + Chr2:18610799-18610818 MsG0280007655.01.T01:intron 45.0%
AGCAACCAACAGAATGGGTA+GGG - Chr2:18609169-18609188 None:intergenic 45.0%
AGGGGCTGTAGTTTAAGAAG+AGG + Chr2:18610784-18610803 MsG0280007655.01.T01:intron 45.0%
ATCAGAATCATGAGCGAGGA+GGG - Chr2:18612191-18612210 None:intergenic 45.0%
ATGGATACGAACATGGACAC+CGG + Chr2:18608626-18608645 MsG0280007655.01.T01:intron 45.0%
CCCTTCAAATGAATCCTTGC+AGG - Chr2:18612152-18612171 None:intergenic 45.0%
CTAAATGCAGAAGGAGGTGA+TGG - Chr2:18612301-18612320 None:intergenic 45.0%
CTGTTACAGATGTACGAGGT+CGG + Chr2:18605985-18606004 MsG0280007655.01.T01:CDS 45.0%
GAAACTCGGCTTAAGTGGTT+TGG + Chr2:18607001-18607020 MsG0280007655.01.T01:CDS 45.0%
GAGATTAACACAGTCCTCGT+GGG + Chr2:18611058-18611077 MsG0280007655.01.T01:intron 45.0%
GCCTGCAAGGATTCATTTGA+AGG + Chr2:18612148-18612167 MsG0280007655.01.T01:CDS 45.0%
GCGCTTAGTAATTGCGTCTT+TGG - Chr2:18612077-18612096 None:intergenic 45.0%
GGGGCTGTAGTTTAAGAAGA+GGG + Chr2:18610785-18610804 MsG0280007655.01.T01:intron 45.0%
GTAACCCCTATGCCACATAA+TGG + Chr2:18606224-18606243 MsG0280007655.01.T01:intron 45.0%
GTATAGGACGATGTGTTGGA+CGG + Chr2:18606831-18606850 MsG0280007655.01.T01:intron 45.0%
GTGACTGTTACAGATGTACG+AGG + Chr2:18605981-18606000 MsG0280007655.01.T01:CDS 45.0%
TAGACCACCTAAGGGATTAG+GGG + Chr2:18610766-18610785 MsG0280007655.01.T01:intron 45.0%
TAGCAACCAACAGAATGGGT+AGG - Chr2:18609170-18609189 None:intergenic 45.0%
TCTGCTTGACCTTTCCTAAG+TGG - Chr2:18606465-18606484 None:intergenic 45.0%
TGAGATTAACACAGTCCTCG+TGG + Chr2:18611057-18611076 MsG0280007655.01.T01:intron 45.0%
TGTTACAGATGTACGAGGTC+GGG + Chr2:18605986-18606005 MsG0280007655.01.T01:CDS 45.0%
TTGGTGAAAACGTGTCACGA+TGG + Chr2:18610167-18610186 MsG0280007655.01.T01:intron 45.0%
! AACAGCACTGAACTGAGATC+TGG - Chr2:18612113-18612132 None:intergenic 45.0%
! AACCTGCAGGACTTTTGCTT+TGG + Chr2:18608429-18608448 MsG0280007655.01.T01:intron 45.0%
! ACCTGCAGGACTTTTGCTTT+GGG + Chr2:18608430-18608449 MsG0280007655.01.T01:intron 45.0%
! ACGGTTTGTTCACAAAGGGT+AGG - Chr2:18611854-18611873 None:intergenic 45.0%
! CATCATTTTACCACCTTCGG+TGG + Chr2:18606716-18606735 MsG0280007655.01.T01:CDS 45.0%
! CGGTTTGTTCACAAAGGGTA+GGG - Chr2:18611853-18611872 None:intergenic 45.0%
! GGTTAGTCCCTATAAATGGC+TGG + Chr2:18609933-18609952 MsG0280007655.01.T01:intron 45.0%
! TATATGTGTCGATGGCGTGT+CGG + Chr2:18608715-18608734 MsG0280007655.01.T01:intron 45.0%
! TCGAATAGCATTTGCTGCTG+CGG - Chr2:18606084-18606103 None:intergenic 45.0%
! TGAACTGAGATCTGGCTTCA+TGG - Chr2:18612105-18612124 None:intergenic 45.0%
!! AGCTTTTTGGGCTTGGACAA+GGG - Chr2:18611942-18611961 None:intergenic 45.0%
!! CAACAAGAGCTTTTTGGGCT+TGG - Chr2:18611949-18611968 None:intergenic 45.0%
!! GATGCTTTGTTTCAGTTGGG+AGG + Chr2:18612208-18612227 MsG0280007655.01.T01:CDS 45.0%
!! GGTTGGTTTGTTAGATGGAG+AGG + Chr2:18609527-18609546 MsG0280007655.01.T01:intron 45.0%
!! ATAAATAATAAATAGTAAAA+TGG + Chr2:18607531-18607550 MsG0280007655.01.T01:intron 5.0%
!!! TACATAATTTTTTTTTTTTT+AGG - Chr2:18607866-18607885 None:intergenic 5.0%
ACAGAGTTGACAAGCCCTTG+AGG + Chr2:18608845-18608864 MsG0280007655.01.T01:intron 50.0%
ACTACAGCCCCTAATCCCTT+AGG - Chr2:18610776-18610795 None:intergenic 50.0%
AGACCTGGAGACTGAAGAAC+GGG + Chr2:18610366-18610385 MsG0280007655.01.T01:intron 50.0%
AGTAAGGAGGGTGGATCTAC+TGG + Chr2:18607054-18607073 MsG0280007655.01.T01:intron 50.0%
ATCATACCATGCAGCCTGCA+AGG + Chr2:18612135-18612154 MsG0280007655.01.T01:CDS 50.0%
ATGAATCCTTGCAGGCTGCA+TGG - Chr2:18612144-18612163 None:intergenic 50.0%
CACATCCCTACCCATTCTGT+TGG + Chr2:18609161-18609180 MsG0280007655.01.T01:intron 50.0%
CAGACCTGGAGACTGAAGAA+CGG + Chr2:18610365-18610384 MsG0280007655.01.T01:intron 50.0%
CATCAGAATCATGAGCGAGG+AGG - Chr2:18612192-18612211 None:intergenic 50.0%
GAGAGATGGGAATGTTGCGT+TGG + Chr2:18606887-18606906 MsG0280007655.01.T01:intron 50.0%
GATATCGTGAGACTCAGCAG+TGG - Chr2:18611771-18611790 None:intergenic 50.0%
GCTGCTGCAGAGATATCAGA+CGG - Chr2:18608941-18608960 None:intergenic 50.0%
GGAGCCCTACATCCATTATG+TGG - Chr2:18606239-18606258 None:intergenic 50.0%
GTCAGTTTCCATGTCGTGTC+CGG - Chr2:18608648-18608667 None:intergenic 50.0%
GTGATTTCTTGGTCCTCTGC+CGG + Chr2:18606008-18606027 MsG0280007655.01.T01:CDS 50.0%
TACGAGGTCGGGTGATTTCT+TGG + Chr2:18605997-18606016 MsG0280007655.01.T01:CDS 50.0%
TCAACGATTTCCACCGAAGG+TGG - Chr2:18606729-18606748 None:intergenic 50.0%
TCAGTTGGGAGGAAACTGCT+TGG + Chr2:18612219-18612238 MsG0280007655.01.T01:CDS 50.0%
TCCCAAAGCAAAAGTCCTGC+AGG - Chr2:18608434-18608453 None:intergenic 50.0%
TCCCTGTCTAGGAAGAGATG+CGG + Chr2:18606151-18606170 MsG0280007655.01.T01:CDS 50.0%
TGCAGAGATATCAGACGGAG+AGG - Chr2:18608936-18608955 None:intergenic 50.0%
TGGTGGAAACTCGGCTTAAG+TGG + Chr2:18606996-18607015 MsG0280007655.01.T01:CDS 50.0%
TTGACAAGCCCTTGAGGTAG+AGG + Chr2:18608851-18608870 MsG0280007655.01.T01:intron 50.0%
! ATTTGCTGCTGCGGTTTGAG+CGG - Chr2:18606075-18606094 None:intergenic 50.0%
! GAAAGTGCGATTTGCAGACC+TGG + Chr2:18610351-18610370 MsG0280007655.01.T01:intron 50.0%
! GCTTAAGTGGTTTGGGCATG+TGG + Chr2:18607009-18607028 MsG0280007655.01.T01:CDS 50.0%
!! GAAGGAGGTGATGGTGTCAT+TGG - Chr2:18612292-18612311 None:intergenic 50.0%
!! GAGCTTTTTGGGCTTGGACA+AGG - Chr2:18611943-18611962 None:intergenic 50.0%
AAGGAGGGTGGATCTACTGG+AGG + Chr2:18607057-18607076 MsG0280007655.01.T01:intron 55.0%
ACAGCCCCTAATCCCTTAGG+TGG - Chr2:18610773-18610792 None:intergenic 55.0%
AGGAGGGTGGATCTACTGGA+GGG + Chr2:18607058-18607077 MsG0280007655.01.T01:intron 55.0%
CAAGCCCTTGAGGTAGAGGA+AGG + Chr2:18608855-18608874 MsG0280007655.01.T01:intron 55.0%
CACAACACGTGTCCGACACT+AGG + Chr2:18608745-18608764 MsG0280007655.01.T01:intron 55.0%
GACCTGGAGACTGAAGAACG+GGG + Chr2:18610367-18610386 MsG0280007655.01.T01:intron 55.0%
GCCGCATCTCTTCCTAGACA+GGG - Chr2:18606155-18606174 None:intergenic 55.0%
TAGATGGAGAGGCTGCTGCA+GGG + Chr2:18609538-18609557 MsG0280007655.01.T01:intron 55.0%
TGCCGCATCTCTTCCTAGAC+AGG - Chr2:18606156-18606175 None:intergenic 55.0%
TTAGATGGAGAGGCTGCTGC+AGG + Chr2:18609537-18609556 MsG0280007655.01.T01:intron 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG + Chr2:18608781-18608800 MsG0280007655.01.T01:intron 55.0%
!! TGCCGGTTCGTGTGGATTCA+AGG + Chr2:18606025-18606044 MsG0280007655.01.T01:CDS 55.0%
AGAGGCTGCTGCAGGGATGT+CGG + Chr2:18609545-18609564 MsG0280007655.01.T01:intron 60.0%
CATGGACACCGGACACGACA+TGG + Chr2:18608637-18608656 MsG0280007655.01.T01:intron 60.0%
GAATCCACACGAACCGGCAG+AGG - Chr2:18606024-18606043 None:intergenic 60.0%
GCTGCGGTTTGAGCGGCAAA+TGG - Chr2:18606068-18606087 None:intergenic 60.0%
! GATGTCGGCTGGAGAGGATC+CGG + Chr2:18609560-18609579 MsG0280007655.01.T01:intron 60.0%
CGCCCCGTTCTTCAGTCTCC+AGG - Chr2:18610372-18610391 None:intergenic 65.0%
! TGCAGGGATGTCGGCTGGAG+AGG + Chr2:18609554-18609573 MsG0280007655.01.T01:intron 65.0%
!! TGGTCCTCTGCCGGTTCGTG+TGG + Chr2:18606017-18606036 MsG0280007655.01.T01:CDS 65.0%
GCTGCTGCAGGGATGTCGGC+TGG + Chr2:18609549-18609568 MsG0280007655.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 18605861 18612345 18605861 ID=MsG0280007655.01;Name=MsG0280007655.01
Chr2 mRNA 18605861 18612345 18605861 ID=MsG0280007655.01.T01;Parent=MsG0280007655.01;Name=MsG0280007655.01.T01;_AED=0.41;_eAED=0.59;_QI=0|0|0|1|1|1|4|0|501
Chr2 exon 18605861 18606197 18605861 ID=MsG0280007655.01.T01:exon:4264;Parent=MsG0280007655.01.T01
Chr2 exon 18606424 18606802 18606424 ID=MsG0280007655.01.T01:exon:4265;Parent=MsG0280007655.01.T01
Chr2 exon 18606922 18607054 18606922 ID=MsG0280007655.01.T01:exon:4266;Parent=MsG0280007655.01.T01
Chr2 exon 18611689 18612345 18611689 ID=MsG0280007655.01.T01:exon:4267;Parent=MsG0280007655.01.T01
Chr2 CDS 18605861 18606197 18605861 ID=MsG0280007655.01.T01:cds;Parent=MsG0280007655.01.T01
Chr2 CDS 18606424 18606802 18606424 ID=MsG0280007655.01.T01:cds;Parent=MsG0280007655.01.T01
Chr2 CDS 18606922 18607054 18606922 ID=MsG0280007655.01.T01:cds;Parent=MsG0280007655.01.T01
Chr2 CDS 18611689 18612345 18611689 ID=MsG0280007655.01.T01:cds;Parent=MsG0280007655.01.T01
Gene Sequence

>MsG0280007655.01.T01

ATGGCAAAATCTATACCGAAAATTGGTTCACGTAAAAATGGACGTATTGGTTCGCGTAAACAACCTCGTAAAATACCAAAGGGAGTTATTTATGTTCAAGCTAGTTTCAACAATACCATTGTGACTGTTACAGATGTACGAGGTCGGGTGATTTCTTGGTCCTCTGCCGGTTCGTGTGGATTCAAGGTTACACAAAGGGGGACACCATTTGCCGCTCAAACCGCAGCAGCAAATGCTATTCGAATAGTAGTAGATCAAGGCATGCAACGAGCAGAAGTCATAATAAAAGGTCCCTGTCTAGGAAGAGATGCGGCATTAAGAGCTATTCGTAGAAGTGACAGTAAGTGTCTTTATTATGGACGCTTTATTCTGTCTCCACTTAGGAAAGGTCAAGCAGATACAATAGGCATTGCAATGCGAAGAATTTTGCTCGGAGAAATAGAGGGAACATGTATCACACGTGCAAAATCTGAGAAAATACCACATGCATATTCTACCATAGTAGGTATTCAAGAATCAATACATGAAATTTTAATGAATTTGAAAGAAATTGTATTGAAAAGTAATCTGTATGGAACTCGGGACGCATCTATTTGTTTCAAAGGTCCTGGATATGTAACTGCTCAAGACATCATTTTACCACCTTCGGTGGAAATCGTTGATAATACACAACATATAGCTGACCTAACAGAACCTTCAAAAAATAAATTTGTGAGAGTAAGACTAGATGAGATAAGATTAGCAATTAAAATATTAGAGAGAGTTGAGGTAACATCTATAGTAGAAAAGATGGTGGAAACTCGGCTTAAGTGGTTTGGGCATGTGGAGAGAAGACTCGTAGATTTTGTAAGAAGAGACAAAATGAATTTCACAAATAAAATTGTTCTCTTCACTATAACCCTTGTCTCATTCCTTTTAATTGGCAATGCCACTGCTGAGTCTCACGATATCCATGTCGTACATCACAATCTAAAACCTGATCTCTTGAATTTCTGCAAAAAAACTACAAACCCTACCCTTTGTGAACAAACCGTTCAACCACACTTCATCAAGAGTATTCTTGATCCCATTAAGGCTCTTGATATCGAAGTTGATGCAGCCCTTGTCCAAGCCCAAAAAGCTCTTGTTGTCATTGGGGAGTTACTTAAAAAACCAGGCATCTCAAAATCTTTCAAGGATTCTCTTGACATATGCAAGGATCAATACGGCATGATATTGGATTCTATAAAACTAACCAAAGACGCAATTACTAAGCGCTGGTTCCATGAAGCCAGATCTCAGTTCAGTGCTGTTATATCATACCATGCAGCCTGCAAGGATTCATTTGAAGGGATAGAGAAAGAATACTCCCTCCTCGCTCATGATTCTGATGCTTTGTTTCAGTTGGGAGGAAACTGCTTGGACACCATTGCTGACTTAGAAAATTCTCAAGGTCCTAAAAATGAAGTACCAATGACACCATCACCTCCTTCTGCATTTAGCAACGTAATTGGAACCCTACCATAA
Protein sequence

>MsG0280007655.01.T01

MAKSIPKIGSRKNGRIGSRKQPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKVTQRGTPFAAQTAAANAIRIVVDQGMQRAEVIIKGPCLGRDAALRAIRRSDSKCLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHAYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIADLTEPSKNKFVRVRLDEIRLAIKILERVEVTSIVEKMVETRLKWFGHVERRLVDFVRRDKMNFTNKIVLFTITLVSFLLIGNATAESHDIHVVHHNLKPDLLNFCKKTTNPTLCEQTVQPHFIKSILDPIKALDIEVDAALVQAQKALVVIGELLKKPGISKSFKDSLDICKDQYGMILDSIKLTKDAITKRWFHEARSQFSAVISYHAACKDSFEGIEKEYSLLAHDSDALFQLGGNCLDTIADLENSQGPKNEVPMTPSPPSAFSNVIGTLP*