AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045283.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045283.01.T01 MTR_8g069390 77.535 503 49 5 242 680 72 574 0.0 729
MsG0880045283.01.T01 MTR_2g076780 55.000 220 83 5 34 241 18 233 2.20e-69 226
MsG0880045283.01.T01 MTR_8g069080 53.636 220 85 6 33 240 49 263 2.51e-65 217
MsG0880045283.01.T01 MTR_8g069380 86.458 96 8 1 146 241 21 111 2.82e-53 179
MsG0880045283.01.T01 MTR_3g100650 43.810 210 84 4 50 241 77 270 4.60e-42 154
MsG0880045283.01.T01 MTR_5g032600 44.059 202 95 3 50 241 75 268 2.54e-41 152
MsG0880045283.01.T01 MTR_8g442330 48.428 159 48 4 62 219 14 139 8.93e-40 143
MsG0880045283.01.T01 MTR_5g065440 43.721 215 93 6 50 241 55 264 5.50e-39 145
MsG0880045283.01.T01 MTR_5g020510 37.379 206 108 5 53 245 99 296 1.17e-38 145
MsG0880045283.01.T01 MTR_1g077020 39.000 200 90 5 51 241 7 183 1.52e-38 141
MsG0880045283.01.T01 MTR_7g010300 38.095 210 105 4 50 245 85 283 1.12e-35 138
MsG0880045283.01.T01 MTR_6g012280 39.908 218 95 8 53 253 91 289 1.28e-33 132
MsG0880045283.01.T01 MTR_8g051480 61.856 97 32 3 145 240 32 124 4.32e-31 118
MsG0880045283.01.T01 MTR_4g134580 56.944 72 26 1 182 253 284 350 1.53e-20 94.4
MsG0880045283.01.T01 MTR_4g134580 56.140 57 25 0 53 109 113 169 1.96e-17 85.1
MsG0880045283.01.T01 MTR_3g039810 48.529 68 34 1 50 116 17 84 5.07e-17 76.6
MsG0880045283.01.T01 MTR_8g467340 56.140 57 25 0 182 238 271 327 2.41e-15 79.0
MsG0880045283.01.T01 MTR_8g467340 57.895 57 22 1 48 102 59 115 5.27e-14 74.7
MsG0880045283.01.T01 MTR_6g073013 45.000 60 32 1 182 240 101 160 4.39e-13 68.6
MsG0880045283.01.T01 MTR_6g073013 50.000 58 27 2 53 109 19 75 6.20e-13 68.2
MsG0880045283.01.T01 MTR_6g012220 49.020 51 22 1 51 101 19 65 1.06e-12 64.3
MsG0880045283.01.T01 MTR_8g032100 60.870 46 18 0 189 234 125 170 6.52e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045283.01.T01 AT3G26570 60.819 513 127 10 242 680 75 587 1.09e-179 524
MsG0880045283.01.T01 AT3G26570 60.819 513 127 10 242 680 101 613 5.20e-179 523
MsG0880045283.01.T01 AT4G24660 41.969 193 87 4 51 241 47 216 3.43e-44 158
MsG0880045283.01.T01 AT4G24660 41.538 195 89 4 51 243 47 218 3.77e-43 155
MsG0880045283.01.T01 AT2G02540 38.356 219 85 7 51 241 85 281 3.88e-41 152
MsG0880045283.01.T01 AT2G02540 38.356 219 85 7 51 241 85 281 3.88e-41 152
MsG0880045283.01.T01 AT1G14440 39.899 198 98 5 51 238 88 274 6.07e-38 144
MsG0880045283.01.T01 AT1G14440 39.899 198 98 5 51 238 88 274 6.07e-38 144
MsG0880045283.01.T01 AT2G18350 40.426 188 99 3 51 238 80 254 2.57e-37 140
MsG0880045283.01.T01 AT5G65410 40.104 192 98 4 52 241 74 250 1.65e-36 139
MsG0880045283.01.T01 AT1G69600 38.249 217 100 8 51 253 29 225 4.14e-33 128
MsG0880045283.01.T01 AT3G50890 34.171 199 105 5 53 242 60 241 1.33e-32 127
MsG0880045283.01.T01 AT5G15210 35.784 204 109 5 53 249 56 244 4.37e-30 120
MsG0880045283.01.T01 AT5G60480 36.979 192 96 5 51 239 35 204 3.18e-29 116
MsG0880045283.01.T01 AT3G28920 32.540 252 124 7 51 275 50 282 9.38e-27 111
MsG0880045283.01.T01 AT1G74660 66.038 53 18 0 50 102 36 88 7.63e-21 88.2
MsG0880045283.01.T01 AT1G74660 66.038 53 18 0 50 102 36 88 8.79e-21 88.2
MsG0880045283.01.T01 AT1G75240 61.290 62 23 1 50 110 73 134 1.58e-19 90.5
MsG0880045283.01.T01 AT1G75240 56.667 60 26 0 179 238 237 296 2.17e-17 84.0
MsG0880045283.01.T01 AT3G28917 59.259 54 21 1 50 102 30 83 2.32e-17 78.2
MsG0880045283.01.T01 AT5G39760 47.945 73 38 0 181 253 199 271 3.70e-16 80.9
MsG0880045283.01.T01 AT1G18835 54.717 53 21 1 50 102 23 72 1.32e-15 72.8

Find 159 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCAGCTGCTGCTTGTCC+TGG 0.170623 8:-56893249 None:intergenic
TGAAATAATTTAGCAATCTT+TGG 0.197348 8:+56894257 MsG0880045283.01.T01:three_prime_UTR
TGTTTATTTGTGGTGAAATT+TGG 0.201876 8:+56894123 MsG0880045283.01.T01:three_prime_UTR
GAAACTAGGGCTACCGATAT+CGG 0.248191 8:+56893836 MsG0880045283.01.T01:CDS
CCTTTGTTTATGACATCTTT+AGG 0.248421 8:+56891125 MsG0880045283.01.T01:CDS
CGAGATAGGTGTTAGATCTT+TGG 0.261382 8:-56887243 None:intergenic
GAAGAATATCATACAAATTC+TGG 0.266489 8:+56887035 MsG0880045283.01.T01:CDS
TGGAACCGTCGGGGCTTTCC+TGG 0.279990 8:+56893371 MsG0880045283.01.T01:CDS
TCCGGTTGGTGCTACCTTAT+CGG 0.280482 8:+56893968 MsG0880045283.01.T01:CDS
TGCTGCTGGTACTTGGTTAC+AGG 0.284265 8:+56891439 MsG0880045283.01.T01:CDS
GTTCTTGCTTGGGGTGGATT+TGG 0.288654 8:+56893684 MsG0880045283.01.T01:CDS
AGCTTCTTCTCTGATATTAC+AGG 0.298759 8:+56893477 MsG0880045283.01.T01:CDS
GGTGGATTTGGAATCGTTGC+AGG 0.303853 8:+56893696 MsG0880045283.01.T01:CDS
CAGAGAAGAAGCTTATGTTT+TGG 0.304120 8:-56893467 None:intergenic
CACTTGCTGCTGCTGGTACT+TGG 0.307974 8:+56891432 MsG0880045283.01.T01:CDS
TTCATGGGCGGTTACTATTC+CGG 0.308155 8:+56893950 MsG0880045283.01.T01:CDS
CTGCAGCTGCTGCTTGTCCT+GGG 0.310215 8:-56893248 None:intergenic
GTTCTGTTTGCTTCGAAACT+AGG 0.311873 8:+56893822 MsG0880045283.01.T01:CDS
GAAGATGTCCGAGTTGTTTA+CGG 0.312285 8:-56893407 None:intergenic
TGAAAATTCAGAGAAAATAT+TGG 0.350023 8:+56894291 MsG0880045283.01.T01:three_prime_UTR
TCCGATTGATGTTCTTGCTT+GGG 0.350128 8:+56893674 MsG0880045283.01.T01:CDS
GAGAATAACGATGAAGTATC+AGG 0.354438 8:+56891023 MsG0880045283.01.T01:CDS
GCTGTATTTCTCGGCGTAAC+TGG 0.359205 8:+56893282 MsG0880045283.01.T01:CDS
TGAAGGAGATTTGTGCTTCA+TGG 0.362113 8:+56893934 MsG0880045283.01.T01:CDS
AATTTAACATGGTGAACCTT+TGG 0.362643 8:+56894449 MsG0880045283.01.T01:three_prime_UTR
CTTGGTGCTCTGGTTGTAGA+AGG 0.364414 8:-56887299 None:intergenic
CAAGTCAAATACTCCACATT+TGG 0.370050 8:+56893434 MsG0880045283.01.T01:CDS
CTTTCTTCACTTGCTGCTGC+TGG 0.370685 8:+56891425 MsG0880045283.01.T01:CDS
AAAACTCGCAACAACCATCT+AGG 0.381472 8:-56887127 None:intergenic
ACTCAACTTGAAATAGTTTA+CGG 0.382692 8:+56893510 MsG0880045283.01.T01:CDS
TTCCGATTGATGTTCTTGCT+TGG 0.384604 8:+56893673 MsG0880045283.01.T01:CDS
GCACCAATTGCTGTATTTCT+CGG 0.392067 8:+56893273 MsG0880045283.01.T01:CDS
TACAGAGTTATAGCTACAAT+TGG 0.393371 8:+56893735 MsG0880045283.01.T01:CDS
GGTACTGATGGTGGTGGAGA+AGG 0.393432 8:+56887431 MsG0880045283.01.T01:CDS
CGTCGTGCCCCTTGGTGCTC+TGG 0.393789 8:-56887309 None:intergenic
AATGCCTGGCTTAGAGCTAT+TGG 0.394818 8:-56893342 None:intergenic
TAGAAGGAGTTGGTGCTTGA+GGG 0.396879 8:-56887283 None:intergenic
ACACTAGTTGGTGCAGTAAT+GGG 0.403375 8:+56893867 MsG0880045283.01.T01:CDS
GACATCTTTAGGACAAGGTT+TGG 0.406475 8:+56891136 MsG0880045283.01.T01:CDS
TAGCAATCTTTGGACTTTGA+AGG 0.411347 8:+56894267 MsG0880045283.01.T01:three_prime_UTR
CATTAGCTTGTGGAACCGTC+GGG 0.412945 8:+56893361 MsG0880045283.01.T01:CDS
AGCCGAGTTTGCGGCTGCCT+CGG 0.415177 8:+56893797 MsG0880045283.01.T01:CDS
TAGTTTCAGTGTAAATTTCA+AGG 0.415702 8:+56887064 MsG0880045283.01.T01:CDS
AAACTAGGGCTACCGATATC+GGG 0.416528 8:+56893837 MsG0880045283.01.T01:CDS
CTAAGAAGAGGTTCAGGTCT+AGG 0.417148 8:+56887465 MsG0880045283.01.T01:CDS
ATTGGAGGTTATGCCCTAGA+TGG 0.417532 8:+56887113 MsG0880045283.01.T01:CDS
TGAGATTAACTGTTTATTTG+TGG 0.421107 8:+56894113 MsG0880045283.01.T01:three_prime_UTR
ATTTCAAGTTGAGTACCCTT+TGG 0.427540 8:-56893501 None:intergenic
CACAATCTAAGAAGAGGTTC+AGG 0.427926 8:+56887459 MsG0880045283.01.T01:CDS
AAGAACCATGCTTCTAGCAT+TGG 0.427928 8:+56887095 MsG0880045283.01.T01:CDS
TCAGTACCACCACCGTTGAT+AGG 0.444489 8:-56887416 None:intergenic
ATGGGAACTTCTGTTGGATC+TGG 0.444826 8:+56891248 MsG0880045283.01.T01:CDS
GTAGAAGGAGTTGGTGCTTG+AGG 0.446152 8:-56887284 None:intergenic
CTGAAGAATCTTTCAACAGA+TGG 0.447585 8:-56894388 None:intergenic
AAGACAAAGATGTTATCATA+TGG 0.454924 8:+56891164 MsG0880045283.01.T01:CDS
AACCATGCTTCTAGCATTGG+AGG 0.458109 8:+56887098 MsG0880045283.01.T01:CDS
GCATTAGCTTGTGGAACCGT+CGG 0.458457 8:+56893360 MsG0880045283.01.T01:CDS
CACCGAGGCAGCCGCAAACT+CGG 0.458951 8:-56893799 None:intergenic
TACATCTACCTTTGTCTGAA+GGG 0.459664 8:+56887342 MsG0880045283.01.T01:CDS
ACGCCGAGAAATACAGCAAT+TGG 0.460216 8:-56893276 None:intergenic
GTACTGATGGTGGTGGAGAA+GGG 0.461446 8:+56887432 MsG0880045283.01.T01:CDS
ACCGATAAGGTAGCACCAAC+CGG 0.463631 8:-56893969 None:intergenic
CTACATCTACCTTTGTCTGA+AGG 0.464986 8:+56887341 MsG0880045283.01.T01:CDS
AACGATGTCTCCAACGCAAT+AGG 0.473437 8:+56893591 MsG0880045283.01.T01:CDS
AGGATTTGCAGCCGAGTTTG+CGG 0.475291 8:+56893788 MsG0880045283.01.T01:CDS
TACACTAGTTGGTGCAGTAA+TGG 0.476930 8:+56893866 MsG0880045283.01.T01:CDS
GAAGGAGATTTGTGCTTCAT+GGG 0.479920 8:+56893935 MsG0880045283.01.T01:CDS
ATTCTACAAGGCGCAGCAAA+AGG 0.482474 8:+56893636 MsG0880045283.01.T01:CDS
GAACTGGTCGTCGTGCCCCT+TGG 0.485410 8:-56887317 None:intergenic
CATGGAGCACTAAACGAGAT+AGG 0.491077 8:-56887257 None:intergenic
GATCTGGTGCATTGTCACTT+AGG 0.491977 8:+56891264 MsG0880045283.01.T01:CDS
TTCTGTTTGCTTCGAAACTA+GGG 0.492039 8:+56893823 MsG0880045283.01.T01:CDS
CCCCAAGCAAGAACATCAAT+CGG 0.492615 8:-56893675 None:intergenic
CAACATGCTGCAACAGAAAA+CGG 0.492938 8:+56890999 MsG0880045283.01.T01:CDS
TCGGCTGCAAATCCTCTTGT+CGG 0.500344 8:-56893780 None:intergenic
GTTGGTGCAGTAATGGGAGT+TGG 0.502537 8:+56893873 MsG0880045283.01.T01:CDS
CTCTGATATTACAGGTCCAA+AGG 0.503091 8:+56893485 MsG0880045283.01.T01:CDS
CTCCAACGCAATAGGTCCAT+TGG 0.509756 8:+56893599 MsG0880045283.01.T01:CDS
CAGCAATTGTTTCCTTCCTG+TGG 0.511135 8:-56887217 None:intergenic
TGTGGTGAAATTTGGAGAAG+AGG 0.513040 8:+56894131 MsG0880045283.01.T01:three_prime_UTR
AGTGTATGTGTCCCCGATAT+CGG 0.513359 8:-56893849 None:intergenic
CAAAGGTAGATGTAGAGAAC+TGG 0.513796 8:-56887333 None:intergenic
TACGGATAGTTCTGTTGACC+AGG 0.515812 8:-56893389 None:intergenic
CAAAATAACAAACATACCCT+TGG 0.518570 8:+56887626 MsG0880045283.01.T01:CDS
TGGGCGGTTACTATTCCGGT+TGG 0.521858 8:+56893954 MsG0880045283.01.T01:CDS
TCAAGCGTTTGCATGTTAAG+TGG 0.523492 8:+56886912 None:intergenic
CGTTGCAGGGCTAATGATGT+GGG 0.524372 8:+56893710 MsG0880045283.01.T01:CDS
CGGTTCCACAAGCTAATGCC+TGG 0.524860 8:-56893356 None:intergenic
AATGCAATGGGAACTTCTGT+TGG 0.531915 8:+56891242 MsG0880045283.01.T01:CDS
TTCTACAACCAGAGCACCAA+GGG 0.534569 8:+56887301 MsG0880045283.01.T01:CDS
CCACGTGTAAATCACCGATA+AGG 0.535689 8:-56893982 None:intergenic
CAAGCGTTTGCATGTTAAGT+GGG 0.536716 8:+56886913 None:intergenic
CTAAGCCAGGCATTAGCTTG+TGG 0.542312 8:+56893351 MsG0880045283.01.T01:CDS
AATGATGTTGCAAATGCAAT+GGG 0.542803 8:+56891230 MsG0880045283.01.T01:CDS
ACATCTACCTTTGTCTGAAG+GGG 0.543744 8:+56887343 MsG0880045283.01.T01:CDS
TAGAACAGGTTATATGTATG+TGG 0.544813 8:+56894059 MsG0880045283.01.T01:three_prime_UTR
CCGATTGATGTTCTTGCTTG+GGG 0.552108 8:+56893675 MsG0880045283.01.T01:CDS
GTGGATTTGGAATCGTTGCA+GGG 0.552937 8:+56893697 MsG0880045283.01.T01:CDS
TCGGGGACACATACACTAGT+TGG 0.555114 8:+56893855 MsG0880045283.01.T01:CDS
CGAGTTTGCGGCTGCCTCGG+TGG 0.555593 8:+56893800 MsG0880045283.01.T01:CDS
ATTGATGTTCTTGCTTGGGG+TGG 0.555893 8:+56893678 MsG0880045283.01.T01:CDS
TCGTTGCAGGGCTAATGATG+TGG 0.557121 8:+56893709 MsG0880045283.01.T01:CDS
TGTTTCATGTCATTTGCTCA+CGG 0.557308 8:+56893564 MsG0880045283.01.T01:CDS
AGGTTGGAAGATTCAGAAGA+AGG 0.560094 8:+56887535 MsG0880045283.01.T01:CDS
GTCTAGATCTTAAAAGCCAA+AGG 0.566254 8:-56894465 None:intergenic
TAATGTCAGCGAAGAAGAGA+TGG 0.566350 8:+56886947 MsG0880045283.01.T01:CDS
TCTGATATTACAGGTCCAAA+GGG 0.566683 8:+56893486 MsG0880045283.01.T01:CDS
GGCCAATGGACCTATTGCGT+TGG 0.567487 8:-56893601 None:intergenic
ATAGCTAATGCACCGGCCAA+TGG 0.568991 8:-56893615 None:intergenic
TGTGACTAGTACAATGCAGA+AGG 0.570955 8:+56891346 MsG0880045283.01.T01:CDS
GTCGAGCCTATCAACGGTGG+TGG 0.571328 8:+56887410 MsG0880045283.01.T01:CDS
TACAATTGGAAAGAAAATAA+CGG 0.573343 8:+56893749 MsG0880045283.01.T01:CDS
GTTGGTGCTTGAGGGAGGCA+TGG 0.574455 8:-56887275 None:intergenic
AAACTCGCAACAACCATCTA+GGG 0.578668 8:-56887126 None:intergenic
ATCAACGGTGGTGGTACTGA+TGG 0.580073 8:+56887419 MsG0880045283.01.T01:CDS
TGTGTTGACAGCTGCAGTGT+TGG 0.582448 8:+56891292 MsG0880045283.01.T01:CDS
CCTAAAGATGTCATAAACAA+AGG 0.582464 8:-56891125 None:intergenic
TAACGATGAAGTATCAGGAA+TGG 0.585273 8:+56891028 MsG0880045283.01.T01:CDS
CCTTATCGGTGATTTACACG+TGG 0.586036 8:+56893982 MsG0880045283.01.T01:CDS
GCTAAGTGGGAAAGCAGCAA+AGG 0.591804 8:-56893310 None:intergenic
TTGGAGAAGAGGATCGGCAA+GGG 0.595338 8:+56894142 MsG0880045283.01.T01:three_prime_UTR
GCTCTGGTTGTAGAAGGAGT+TGG 0.596322 8:-56887293 None:intergenic
TAATGATGTTGCAAATGCAA+TGG 0.596839 8:+56891229 MsG0880045283.01.T01:CDS
TATAACAATATGTATAGTAA+TGG 0.596864 8:+56891088 MsG0880045283.01.T01:CDS
TTGTAGAATAGCTAATGCAC+CGG 0.598942 8:-56893622 None:intergenic
AAACAGTTAATCTCAAAAGA+CGG 0.605053 8:-56894105 None:intergenic
TGAAATTTGGAGAAGAGGAT+CGG 0.607910 8:+56894136 MsG0880045283.01.T01:three_prime_UTR
AACCTCCAATGCTAGAAGCA+TGG 0.609063 8:-56887100 None:intergenic
AACGCAATAGGTCCATTGGC+CGG 0.610227 8:+56893603 MsG0880045283.01.T01:CDS
GGTCTTCACAATCTAAGAAG+AGG 0.612128 8:+56887453 MsG0880045283.01.T01:CDS
GGTGCATTAGCTATTCTACA+AGG 0.615570 8:+56893624 MsG0880045283.01.T01:CDS
TCATAGAAACTTCCACAGGA+AGG 0.619093 8:+56887205 MsG0880045283.01.T01:CDS
GGTGGTGGTACTGATGGTGG+TGG 0.619142 8:+56887425 MsG0880045283.01.T01:CDS
AGAACTATCCGTAAACAACT+CGG 0.621558 8:+56893399 MsG0880045283.01.T01:CDS
ATGGGAGTTGGATTCGCGAG+AGG 0.625208 8:+56893885 MsG0880045283.01.T01:CDS
TTTATGACATCTTTAGGACA+AGG 0.625714 8:+56891131 MsG0880045283.01.T01:CDS
AACGGTGGTGGTACTGATGG+TGG 0.628063 8:+56887422 MsG0880045283.01.T01:CDS
CTTCTACAACCAGAGCACCA+AGG 0.630837 8:+56887300 MsG0880045283.01.T01:CDS
ACGGAACTTACACCGACAAG+AGG 0.634990 8:+56893768 MsG0880045283.01.T01:CDS
CATGTTGTCGAGCCTATCAA+CGG 0.638308 8:+56887404 MsG0880045283.01.T01:CDS
GAAGGATGAGAATGTTGTCG+AGG 0.641523 8:+56887553 MsG0880045283.01.T01:CDS
AAGGAGTTGGTGCTTGAGGG+AGG 0.642940 8:-56887280 None:intergenic
GGAGATTTGTGCTTCATGGG+CGG 0.643143 8:+56893938 MsG0880045283.01.T01:CDS
GTTGACCAGGAAAGCCCCGA+CGG 0.645332 8:-56893376 None:intergenic
CAGCGAAGAAGAGATGGTGA+TGG 0.649535 8:+56886953 MsG0880045283.01.T01:CDS
TTCATGTCATTTGCTCACGG+TGG 0.649798 8:+56893567 MsG0880045283.01.T01:CDS
TTTGGAGAAGAGGATCGGCA+AGG 0.650366 8:+56894141 MsG0880045283.01.T01:three_prime_UTR
ATTGTCATAGAAACTTCCAC+AGG 0.652079 8:+56887201 MsG0880045283.01.T01:CDS
ATTAGCTTGTGGAACCGTCG+GGG 0.654249 8:+56893362 MsG0880045283.01.T01:CDS
AACTAGGGCTACCGATATCG+GGG 0.656003 8:+56893838 MsG0880045283.01.T01:CDS
TGTTAGATCAGAAACAGTGA+AGG 0.658218 8:+56893917 MsG0880045283.01.T01:CDS
TGGTTTCTATGTGAAGACTG+TGG 0.659744 8:+56894182 MsG0880045283.01.T01:three_prime_UTR
GTGACTAGTACAATGCAGAA+GGG 0.662462 8:+56891347 MsG0880045283.01.T01:CDS
CATCTACCTTTGTCTGAAGG+GGG 0.665676 8:+56887344 MsG0880045283.01.T01:CDS
GTATACAGTGCAAGTAACCC+AGG 0.669512 8:+56893231 MsG0880045283.01.T01:CDS
GTTGTCGAGCCTATCAACGG+TGG 0.713144 8:+56887407 MsG0880045283.01.T01:CDS
GTTGCAGGGCTAATGATGTG+GGG 0.715224 8:+56893711 MsG0880045283.01.T01:CDS
CGAAGCAAACAGAACCACCG+AGG 0.756636 8:-56893814 None:intergenic
TCTACAACCAGAGCACCAAG+GGG 0.762032 8:+56887302 MsG0880045283.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTAATTAATTTTTTTA+GGG - Chr8:56887659-56887678 None:intergenic 0.0%
!!! TATTATTAATTAATTTTTTT+AGG - Chr8:56887660-56887679 None:intergenic 0.0%
!!! AAAAAAACAAATTTAGTTTA+TGG + Chr8:56888942-56888961 MsG0880045283.01.T01:intron 10.0%
!!! ATAATATTTTTATGATACAA+AGG + Chr8:56889927-56889946 MsG0880045283.01.T01:intron 10.0%
!!! GATTAATTTTTTTTTTTTGA+AGG + Chr8:56887979-56887998 MsG0880045283.01.T01:intron 10.0%
!! AAAAAAATAAAGAATTACAG+CGG - Chr8:56889226-56889245 None:intergenic 15.0%
!! AAAATAAGTATAAGTTATAG+TGG - Chr8:56889565-56889584 None:intergenic 15.0%
!! ATATAATAAAAATCGTAAAG+AGG - Chr8:56889166-56889185 None:intergenic 15.0%
!! ATATCAAAACAAAAAAAGTT+TGG + Chr8:56888678-56888697 MsG0880045283.01.T01:intron 15.0%
!! ATATCAAATAAAATCAAAGA+AGG - Chr8:56889623-56889642 None:intergenic 15.0%
!! CAAATACAAAAATATAAACA+TGG + Chr8:56890227-56890246 MsG0880045283.01.T01:intron 15.0%
!! GTAAAAAAAAAATGCAATAA+CGG + Chr8:56889985-56890004 MsG0880045283.01.T01:intron 15.0%
!! TATAACAATATGTATAGTAA+TGG + Chr8:56891088-56891107 MsG0880045283.01.T01:CDS 15.0%
!! TATCAAAACAAAAAAAGTTT+GGG + Chr8:56888679-56888698 MsG0880045283.01.T01:intron 15.0%
!! TTTCAGAGTAAATTAAAAAT+TGG - Chr8:56891777-56891796 None:intergenic 15.0%
!!! AAAATTACATTTTTTCGAAT+TGG + Chr8:56890088-56890107 MsG0880045283.01.T01:intron 15.0%
!!! ATATAAAGATGTTTTAGAAA+GGG - Chr8:56889194-56889213 None:intergenic 15.0%
!!! ATTTGTTTTATTTTAACAGA+AGG + Chr8:56888131-56888150 MsG0880045283.01.T01:intron 15.0%
!!! CATTTTAACAATTTTTTCAA+AGG + Chr8:56889767-56889786 MsG0880045283.01.T01:intron 15.0%
!!! TATATAAAGATGTTTTAGAA+AGG - Chr8:56889195-56889214 None:intergenic 15.0%
!!! TATCTTTTGATAATTTAACA+TGG + Chr8:56894438-56894457 MsG0880045283.01.T01:three_prime_UTR 15.0%
!!! TTGAAATTGATGTTTTTATA+TGG - Chr8:56890395-56890414 None:intergenic 15.0%
!!! TTTTTATATGGTTGAAATTT+TGG - Chr8:56890383-56890402 None:intergenic 15.0%
!! AAAAAATAAAGAATTACAGC+GGG - Chr8:56889225-56889244 None:intergenic 20.0%
!! AAAAGTAATTAGGTGTATTA+TGG + Chr8:56891629-56891648 MsG0880045283.01.T01:intron 20.0%
!! AATAACAATCTACTTTACAT+GGG + Chr8:56888282-56888301 MsG0880045283.01.T01:intron 20.0%
!! AGAAGAAAATAAACATCATA+CGG + Chr8:56889483-56889502 MsG0880045283.01.T01:intron 20.0%
!! ATAATCCAATGAACTTAATT+AGG + Chr8:56892684-56892703 MsG0880045283.01.T01:intron 20.0%
!! ATCAAAACAAAAAAAGTTTG+GGG + Chr8:56888680-56888699 MsG0880045283.01.T01:intron 20.0%
!! ATCATGAAAGTTTCATATTT+GGG - Chr8:56888838-56888857 None:intergenic 20.0%
!! ATTAATAATATATAGGACGA+AGG - Chr8:56888650-56888669 None:intergenic 20.0%
!! CCTTATCAAAAAAATAAACA+TGG + Chr8:56890253-56890272 MsG0880045283.01.T01:intron 20.0%
!! GACTTCAAAACATTATATTA+TGG - Chr8:56888586-56888605 None:intergenic 20.0%
!! TACAATTGGAAAGAAAATAA+CGG + Chr8:56893749-56893768 MsG0880045283.01.T01:CDS 20.0%
!! TCAAAACAATGATAATACAA+AGG + Chr8:56891751-56891770 MsG0880045283.01.T01:intron 20.0%
!! TGAAAATTCAGAGAAAATAT+TGG + Chr8:56894291-56894310 MsG0880045283.01.T01:three_prime_UTR 20.0%
!! TGAAATAATTTAGCAATCTT+TGG + Chr8:56894257-56894276 MsG0880045283.01.T01:three_prime_UTR 20.0%
!! TTAATGCAACATTTATTTCA+TGG + Chr8:56892932-56892951 MsG0880045283.01.T01:intron 20.0%
!!! AAAAAAGTATTGATGAACTA+TGG + Chr8:56887957-56887976 MsG0880045283.01.T01:intron 20.0%
!!! AATCAAGTTGAAAATTTGAA+GGG + Chr8:56891665-56891684 MsG0880045283.01.T01:intron 20.0%
!!! AGTCATAAAAGAGATAATTT+TGG - Chr8:56892444-56892463 None:intergenic 20.0%
!!! ATGATGGAATATGAAATATA+TGG + Chr8:56890429-56890448 MsG0880045283.01.T01:intron 20.0%
!!! CCATGTTTATTTTTTTGATA+AGG - Chr8:56890256-56890275 None:intergenic 20.0%
!!! CTAATATACAAAACTCATTT+TGG - Chr8:56890038-56890057 None:intergenic 20.0%
!!! GTATTGAATTTGTTAACAAT+TGG + Chr8:56891560-56891579 MsG0880045283.01.T01:intron 20.0%
!!! TAATCAAGTTGAAAATTTGA+AGG + Chr8:56891664-56891683 MsG0880045283.01.T01:intron 20.0%
!!! TATAAAGATGTTTTAGAAAG+GGG - Chr8:56889193-56889212 None:intergenic 20.0%
!!! TGATGTTTTTTTTGTATGTT+TGG - Chr8:56890757-56890776 None:intergenic 20.0%
!!! TGTAAAATAAAAAAGGTGTA+GGG + Chr8:56889108-56889127 MsG0880045283.01.T01:intron 20.0%
!!! TTGTAAAATAAAAAAGGTGT+AGG + Chr8:56889107-56889126 MsG0880045283.01.T01:intron 20.0%
!!! TTGTTTTTTTTATTATTCGG+AGG - Chr8:56888932-56888951 None:intergenic 20.0%
!!! TTTTCAAGATATAATAGAAC+AGG + Chr8:56894045-56894064 MsG0880045283.01.T01:three_prime_UTR 20.0%
!!! TTTTTTTTTTGAAGGAACTA+TGG + Chr8:56887987-56888006 MsG0880045283.01.T01:intron 20.0%
! AAAAATAAAGAATTACAGCG+GGG - Chr8:56889224-56889243 None:intergenic 25.0%
! AAACAGTTAATCTCAAAAGA+CGG - Chr8:56894108-56894127 None:intergenic 25.0%
! AACATTATATTATGGTGACT+TGG - Chr8:56888578-56888597 None:intergenic 25.0%
! AAGACAAAGATGTTATCATA+TGG + Chr8:56891164-56891183 MsG0880045283.01.T01:CDS 25.0%
! AAGTACCTAATTAAGTTCAT+TGG - Chr8:56892692-56892711 None:intergenic 25.0%
! ACATAAAGCTTATGTTACAA+AGG - Chr8:56889373-56889392 None:intergenic 25.0%
! ACCACATTTAAAAAATTCGA+CGG - Chr8:56887174-56887193 None:intergenic 25.0%
! ACTCAACTTGAAATAGTTTA+CGG + Chr8:56893510-56893529 MsG0880045283.01.T01:CDS 25.0%
! AGGAAAATTGTCCATAAAAT+AGG - Chr8:56889731-56889750 None:intergenic 25.0%
! ATATGCTTATCATATTCAAG+AGG - Chr8:56889880-56889899 None:intergenic 25.0%
! CAAATATGAAACTTTCATGA+TGG + Chr8:56888837-56888856 MsG0880045283.01.T01:intron 25.0%
! CAATAACAATCTACTTTACA+TGG + Chr8:56888281-56888300 MsG0880045283.01.T01:intron 25.0%
! CACTTAGAAAATGTAAACTA+AGG - Chr8:56892208-56892227 None:intergenic 25.0%
! CATCATGAAAGTTTCATATT+TGG - Chr8:56888839-56888858 None:intergenic 25.0%
! CTACATGTAATTAGTATACT+TGG - Chr8:56890144-56890163 None:intergenic 25.0%
! GAAACATGTATTAATCATGA+CGG + Chr8:56888528-56888547 MsG0880045283.01.T01:intron 25.0%
! GAAATATATGAGAGTTTCTA+TGG - Chr8:56890797-56890816 None:intergenic 25.0%
! GAAGAATATCATACAAATTC+TGG + Chr8:56887035-56887054 MsG0880045283.01.T01:CDS 25.0%
! GATTCAAATTCATTTCTTGA+TGG - Chr8:56890713-56890732 None:intergenic 25.0%
! GCTGAGTTGTAAAATAAAAA+AGG + Chr8:56889101-56889120 MsG0880045283.01.T01:intron 25.0%
! GGAAAATTGTCCATAAAATA+GGG - Chr8:56889730-56889749 None:intergenic 25.0%
! TACAAATGACACATTTCTAA+TGG - Chr8:56892170-56892189 None:intergenic 25.0%
! TACCATCTTAGAATTTCAAT+TGG + Chr8:56891975-56891994 MsG0880045283.01.T01:intron 25.0%
! TAGTTTCAGTGTAAATTTCA+AGG + Chr8:56887064-56887083 MsG0880045283.01.T01:CDS 25.0%
! TCAAAACAAAAAAAGTTTGG+GGG + Chr8:56888681-56888700 MsG0880045283.01.T01:intron 25.0%
! TCAACAAGATCTTATATTCA+GGG - Chr8:56891508-56891527 None:intergenic 25.0%
! TCAACTTTGATCAATCATTT+CGG + Chr8:56888072-56888091 MsG0880045283.01.T01:intron 25.0%
! TGAGATTAACTGTTTATTTG+TGG + Chr8:56894113-56894132 MsG0880045283.01.T01:three_prime_UTR 25.0%
! TGTAGACAATCATCATTAAA+CGG + Chr8:56888326-56888345 MsG0880045283.01.T01:intron 25.0%
! TGTTTATTTGTGGTGAAATT+TGG + Chr8:56894123-56894142 MsG0880045283.01.T01:three_prime_UTR 25.0%
! TTATGTCAAGTTTGAGAAAA+TGG + Chr8:56888457-56888476 MsG0880045283.01.T01:intron 25.0%
!! AAAAAATGCTTGATTTTGCT+GGG + Chr8:56887507-56887526 MsG0880045283.01.T01:CDS 25.0%
!! ATCCAATTGAAATTCTAAGA+TGG - Chr8:56891980-56891999 None:intergenic 25.0%
!! GAATCTTTGTGTTATTCTTT+AGG - Chr8:56890639-56890658 None:intergenic 25.0%
!! TACTCTGAAAATTTGCAATT+TGG + Chr8:56891787-56891806 MsG0880045283.01.T01:intron 25.0%
!! TATTTGACACACAATGTTTT+GGG - Chr8:56888625-56888644 None:intergenic 25.0%
!! TTGAGTTTTCTGAGTTATTA+AGG + Chr8:56892571-56892590 MsG0880045283.01.T01:intron 25.0%
!! TTTGTAACATAAGCTTTATG+TGG + Chr8:56889372-56889391 MsG0880045283.01.T01:intron 25.0%
!! TTTTAACAGAAGGAGTTAAT+TGG + Chr8:56888141-56888160 MsG0880045283.01.T01:intron 25.0%
!!! AACTATTTTTGTTGCTATGA+TGG + Chr8:56890413-56890432 MsG0880045283.01.T01:intron 25.0%
!!! AATGTTTTTCTTTGAAGACA+AGG - Chr8:56889751-56889770 None:intergenic 25.0%
!!! ACTTTTGTTTGGATTTTACA+TGG + Chr8:56891190-56891209 MsG0880045283.01.T01:CDS 25.0%
!!! ATAAAGATGTTTTAGAAAGG+GGG - Chr8:56889192-56889211 None:intergenic 25.0%
!!! ATCAAGTTGAAAATTTGAAG+GGG + Chr8:56891666-56891685 MsG0880045283.01.T01:intron 25.0%
!!! CAATTTGGTTTTTGTGATAT+AGG + Chr8:56891802-56891821 MsG0880045283.01.T01:intron 25.0%
!!! GTATTTTACTTAGCCTTATT+GGG - Chr8:56888717-56888736 None:intergenic 25.0%
!!! TACTTCTAAGTTTTGTGTTT+TGG + Chr8:56889015-56889034 MsG0880045283.01.T01:intron 25.0%
!!! TGTATTTTACTTAGCCTTAT+TGG - Chr8:56888718-56888737 None:intergenic 25.0%
!!! TTAAAATGATGCTGTTGTTT+TGG - Chr8:56892375-56892394 None:intergenic 25.0%
!!! TTCAAACTTTTTGCTATGTT+TGG - Chr8:56890885-56890904 None:intergenic 25.0%
!!! TTTTGGTGTTTCAAATTGAA+GGG - Chr8:56888904-56888923 None:intergenic 25.0%
!!! TTTTTGGTGTTTCAAATTGA+AGG - Chr8:56888905-56888924 None:intergenic 25.0%
AAACTATTATGAACTGACAG+TGG + Chr8:56893109-56893128 MsG0880045283.01.T01:intron 30.0%
AAAGATGATAAGCTAGCAAA+AGG - Chr8:56890927-56890946 None:intergenic 30.0%
AAAGTTTATCCAAAATCCGT+TGG - Chr8:56891953-56891972 None:intergenic 30.0%
AAATGAAACTTGATGTTGTC+AGG - Chr8:56889311-56889330 None:intergenic 30.0%
AAGAATGTATGCTTAAGTGT+CGG + Chr8:56887808-56887827 MsG0880045283.01.T01:intron 30.0%
AAGTTTACCATTTATGAGAG+AGG + Chr8:56891594-56891613 MsG0880045283.01.T01:intron 30.0%
AATGATGTTGCAAATGCAAT+GGG + Chr8:56891230-56891249 MsG0880045283.01.T01:CDS 30.0%
AATTGTCCATAAAATAGGGA+TGG - Chr8:56889726-56889745 None:intergenic 30.0%
AATTTAACATGGTGAACCTT+TGG + Chr8:56894449-56894468 MsG0880045283.01.T01:three_prime_UTR 30.0%
ACTCTTTCTCTTCATTCATA+TGG + Chr8:56890602-56890621 MsG0880045283.01.T01:intron 30.0%
AGAAACTCTCTTAGAAACAA+AGG - Chr8:56890837-56890856 None:intergenic 30.0%
ATAAACATCATACGGAAGTA+AGG + Chr8:56889491-56889510 MsG0880045283.01.T01:intron 30.0%
ATACAATGTGTAGTAGATAC+TGG - Chr8:56892755-56892774 None:intergenic 30.0%
ATATGAATGAAGAGAAAGAG+TGG - Chr8:56890603-56890622 None:intergenic 30.0%
ATCTACTACACATTGTATAG+TGG + Chr8:56892757-56892776 MsG0880045283.01.T01:intron 30.0%
ATCTTAGGGTTTATCTATGT+GGG + Chr8:56887842-56887861 MsG0880045283.01.T01:intron 30.0%
ATGAATTTGAATCACTCTTG+TGG + Chr8:56890720-56890739 MsG0880045283.01.T01:intron 30.0%
ATTGGAAAAATCTTGCTAAG+TGG - Chr8:56893327-56893346 None:intergenic 30.0%
CAAAATAACAAACATACCCT+TGG + Chr8:56887626-56887645 MsG0880045283.01.T01:CDS 30.0%
CCTAAAGATGTCATAAACAA+AGG - Chr8:56891128-56891147 None:intergenic 30.0%
GAAGAATATAAGTGAATGAG+TGG - Chr8:56890501-56890520 None:intergenic 30.0%
GATAGTACTAAATTGCGAAA+CGG - Chr8:56891480-56891499 None:intergenic 30.0%
GATATAGGAATCTAGTACTT+AGG + Chr8:56891817-56891836 MsG0880045283.01.T01:intron 30.0%
GCATTATTCATTACTAGAAC+AGG - Chr8:56888402-56888421 None:intergenic 30.0%
GTCAAATTCATCAAATGAAG+TGG + Chr8:56893062-56893081 MsG0880045283.01.T01:intron 30.0%
GTCAACAAGATCTTATATTC+AGG - Chr8:56891509-56891528 None:intergenic 30.0%
TAAACATCATACGGAAGTAA+GGG + Chr8:56889492-56889511 MsG0880045283.01.T01:intron 30.0%
TAATGATGTTGCAAATGCAA+TGG + Chr8:56891229-56891248 MsG0880045283.01.T01:CDS 30.0%
TACAGAGTTATAGCTACAAT+TGG + Chr8:56893735-56893754 MsG0880045283.01.T01:CDS 30.0%
TAGAACAGGTTATATGTATG+TGG + Chr8:56894059-56894078 MsG0880045283.01.T01:three_prime_UTR 30.0%
TCGTATTGTTAACACATCAT+CGG - Chr8:56893039-56893058 None:intergenic 30.0%
TCTACTACACATTGTATAGT+GGG + Chr8:56892758-56892777 MsG0880045283.01.T01:intron 30.0%
TCTTAACAAAAACCTTGGTT+AGG + Chr8:56892089-56892108 MsG0880045283.01.T01:intron 30.0%
TTACTAGAACAGGTATTCTT+CGG - Chr8:56888392-56888411 None:intergenic 30.0%
TTCTCTACATGTTGACATAA+CGG - Chr8:56889401-56889420 None:intergenic 30.0%
TTGCTATAGTTGGAAAGTAA+AGG + Chr8:56892338-56892357 MsG0880045283.01.T01:intron 30.0%
TTGGAAAAATCTTGCTAAGT+GGG - Chr8:56893326-56893345 None:intergenic 30.0%
! AAAAATGCTTGATTTTGCTG+GGG + Chr8:56887508-56887527 MsG0880045283.01.T01:CDS 30.0%
! AAACTTCCATCCCTATTTTA+TGG + Chr8:56889717-56889736 MsG0880045283.01.T01:intron 30.0%
! AGAGAAGAAGCTTATGTTTT+GGG - Chr8:56893469-56893488 None:intergenic 30.0%
! AGATCTTGTTGACTAAATCA+CGG + Chr8:56891516-56891535 MsG0880045283.01.T01:intron 30.0%
! ATTATTCGGAGGATACTTTT+TGG - Chr8:56888921-56888940 None:intergenic 30.0%
! ATTTGACACACAATGTTTTG+GGG - Chr8:56888624-56888643 None:intergenic 30.0%
! CAGCTTTTTATTGCTATAGT+TGG + Chr8:56892328-56892347 MsG0880045283.01.T01:intron 30.0%
! CATATTTGGGACATCAAATT+TGG - Chr8:56888825-56888844 None:intergenic 30.0%
! CCTTTGTTTATGACATCTTT+AGG + Chr8:56891125-56891144 MsG0880045283.01.T01:CDS 30.0%
! CTTGTTGCTAATGTTTTTCA+GGG + Chr8:56891374-56891393 MsG0880045283.01.T01:CDS 30.0%
! GAAAAAATGCTTGATTTTGC+TGG + Chr8:56887506-56887525 MsG0880045283.01.T01:CDS 30.0%
! GAAATAGTTTACGGAGTTTT+CGG + Chr8:56893519-56893538 MsG0880045283.01.T01:CDS 30.0%
! GGTGAAGCTTAAAGTTTTTA+AGG + Chr8:56887595-56887614 MsG0880045283.01.T01:CDS 30.0%
! GTATTTGACACACAATGTTT+TGG - Chr8:56888626-56888645 None:intergenic 30.0%
! TATGCTGAAGTTTTCAAATG+AGG + Chr8:56891728-56891747 MsG0880045283.01.T01:intron 30.0%
! TCATATGGAACACTTTTGTT+TGG + Chr8:56891179-56891198 MsG0880045283.01.T01:CDS 30.0%
! TCTTGTTGCTAATGTTTTTC+AGG + Chr8:56891373-56891392 MsG0880045283.01.T01:CDS 30.0%
! TGTTGGTTGCAAAAGTAATT+AGG + Chr8:56891619-56891638 MsG0880045283.01.T01:intron 30.0%
! TTTTGGCCAATGAAATATTG+GGG + Chr8:56889032-56889051 MsG0880045283.01.T01:intron 30.0%
!! ATGTGTCATTTGTATGACAT+TGG + Chr8:56892176-56892195 MsG0880045283.01.T01:intron 30.0%
!! GTTTTGGCCAATGAAATATT+GGG + Chr8:56889031-56889050 MsG0880045283.01.T01:intron 30.0%
!! TCAAGTTGAAAATTTGAAGG+GGG + Chr8:56891667-56891686 MsG0880045283.01.T01:intron 30.0%
!! TGTGTCATTTGTATGACATT+GGG + Chr8:56892177-56892196 MsG0880045283.01.T01:intron 30.0%
!! TTGTTGCTAATGTTTTTCAG+GGG + Chr8:56891375-56891394 MsG0880045283.01.T01:CDS 30.0%
!! TTTATGACATCTTTAGGACA+AGG + Chr8:56891131-56891150 MsG0880045283.01.T01:CDS 30.0%
!!! ACCGTCGAATTTTTTAAATG+TGG + Chr8:56887170-56887189 MsG0880045283.01.T01:CDS 30.0%
!!! AGCTTAAAGTTTTTAAGGCT+TGG + Chr8:56887600-56887619 MsG0880045283.01.T01:CDS 30.0%
!!! GCTTAAAGTTTTTAAGGCTT+GGG + Chr8:56887601-56887620 MsG0880045283.01.T01:CDS 30.0%
!!! TGAGTTGATATTTTCTCTTG+TGG - Chr8:56887011-56887030 None:intergenic 30.0%
!!! TGTTTTGGCCAATGAAATAT+TGG + Chr8:56889030-56889049 MsG0880045283.01.T01:intron 30.0%
!!! TTTTTAGGGCTTTTTACCAA+GGG - Chr8:56887645-56887664 None:intergenic 30.0%
!!! TTTTTTAGGGCTTTTTACCA+AGG - Chr8:56887646-56887665 None:intergenic 30.0%
AAAACCTTGGTTAGGAACAT+AGG + Chr8:56892097-56892116 MsG0880045283.01.T01:intron 35.0%
AAAGTGAGTATCTAGTACCA+AGG - Chr8:56889443-56889462 None:intergenic 35.0%
AAGAAAGAGTGGAAAGAATG+TGG - Chr8:56890562-56890581 None:intergenic 35.0%
AGAACTATCCGTAAACAACT+CGG + Chr8:56893399-56893418 MsG0880045283.01.T01:CDS 35.0%
AGCTTCTTCTCTGATATTAC+AGG + Chr8:56893477-56893496 MsG0880045283.01.T01:CDS 35.0%
AGTTTGCATCATACTATGGT+TGG + Chr8:56892729-56892748 MsG0880045283.01.T01:intron 35.0%
ATATGTGAGTTACACGTGTA+TGG - Chr8:56890299-56890318 None:intergenic 35.0%
ATCTATGTGGGATAAAGGTT+GGG + Chr8:56887854-56887873 MsG0880045283.01.T01:intron 35.0%
ATTGTCATAGAAACTTCCAC+AGG + Chr8:56887201-56887220 MsG0880045283.01.T01:CDS 35.0%
CAACAATCCTCTCTCATAAA+TGG - Chr8:56891604-56891623 None:intergenic 35.0%
CAAGTCAAATACTCCACATT+TGG + Chr8:56893434-56893453 MsG0880045283.01.T01:CDS 35.0%
CATTTATGAGAGAGGATTGT+TGG + Chr8:56891602-56891621 MsG0880045283.01.T01:intron 35.0%
CCTTCAACGTTTGCTTAATT+GGG - Chr8:56889661-56889680 None:intergenic 35.0%
CGTATTGTTAACACATCATC+GGG - Chr8:56893038-56893057 None:intergenic 35.0%
CTAACACAACCTTACAAAAC+CGG + Chr8:56892000-56892019 MsG0880045283.01.T01:intron 35.0%
CTGAAGAATCTTTCAACAGA+TGG - Chr8:56894391-56894410 None:intergenic 35.0%
GATCTTAGGGTTTATCTATG+TGG + Chr8:56887841-56887860 MsG0880045283.01.T01:intron 35.0%
GGTTTATCTATGTGGGATAA+AGG + Chr8:56887849-56887868 MsG0880045283.01.T01:intron 35.0%
GTGTCAGATATTAGTGTATG+CGG + Chr8:56892225-56892244 MsG0880045283.01.T01:intron 35.0%
TAAGAGTCTCACATTGGATA+AGG - Chr8:56891867-56891886 None:intergenic 35.0%
TACATCTACCTTTGTCTGAA+GGG + Chr8:56887342-56887361 MsG0880045283.01.T01:CDS 35.0%
TAGCAATCTTTGGACTTTGA+AGG + Chr8:56894267-56894286 MsG0880045283.01.T01:three_prime_UTR 35.0%
TATCTATGTGGGATAAAGGT+TGG + Chr8:56887853-56887872 MsG0880045283.01.T01:intron 35.0%
TCCTTCAACGTTTGCTTAAT+TGG - Chr8:56889662-56889681 None:intergenic 35.0%
TCTGATATTACAGGTCCAAA+GGG + Chr8:56893486-56893505 MsG0880045283.01.T01:CDS 35.0%
TGAAATTTGGAGAAGAGGAT+CGG + Chr8:56894136-56894155 MsG0880045283.01.T01:three_prime_UTR 35.0%
TGTTAGATCAGAAACAGTGA+AGG + Chr8:56893917-56893936 MsG0880045283.01.T01:CDS 35.0%
TTAGATCAAACAGTAAGCAC+TGG + Chr8:56889516-56889535 MsG0880045283.01.T01:intron 35.0%
TTCGAATTGGTCATCTATTG+CGG + Chr8:56890101-56890120 MsG0880045283.01.T01:intron 35.0%
TTCTGTTTGCTTCGAAACTA+GGG + Chr8:56893823-56893842 MsG0880045283.01.T01:CDS 35.0%
TTGTAGAATAGCTAATGCAC+CGG - Chr8:56893625-56893644 None:intergenic 35.0%
TTTGGCCAATGAAATATTGG+GGG + Chr8:56889033-56889052 MsG0880045283.01.T01:intron 35.0%
! AGCTTATCATCTTTTGCAGA+AGG + Chr8:56890933-56890952 MsG0880045283.01.T01:intron 35.0%
! AGGACTTTTGTAACGAGATT+GGG + Chr8:56887573-56887592 MsG0880045283.01.T01:CDS 35.0%
! CAAGTTGAAAATTTGAAGGG+GGG + Chr8:56891668-56891687 MsG0880045283.01.T01:intron 35.0%
! CAGAGAAGAAGCTTATGTTT+TGG - Chr8:56893470-56893489 None:intergenic 35.0%
! CGTCGTTTCTTGCATTTTAT+GGG + Chr8:56888432-56888451 MsG0880045283.01.T01:intron 35.0%
! GAGAAGAAGCTTATGTTTTG+GGG - Chr8:56893468-56893487 None:intergenic 35.0%
! GAGAATAACGATGAAGTATC+AGG + Chr8:56891023-56891042 MsG0880045283.01.T01:CDS 35.0%
! TAACGATGAAGTATCAGGAA+TGG + Chr8:56891028-56891047 MsG0880045283.01.T01:CDS 35.0%
! TGTTTCATGTCATTTGCTCA+CGG + Chr8:56893564-56893583 MsG0880045283.01.T01:CDS 35.0%
! TGTTTGGATTTTACATGGCT+TGG + Chr8:56891195-56891214 MsG0880045283.01.T01:CDS 35.0%
! TTTGCTATGTTTGGTGAAAG+TGG - Chr8:56890876-56890895 None:intergenic 35.0%
! TTTTTATCTGCTGGAGATGA+AGG + Chr8:56887146-56887165 MsG0880045283.01.T01:CDS 35.0%
!! AGAAGAAGCTTATGTTTTGG+GGG - Chr8:56893467-56893486 None:intergenic 35.0%
!! ATTTCAAGTTGAGTACCCTT+TGG - Chr8:56893504-56893523 None:intergenic 35.0%
!! GTGAAAGAAGTGTGTGTTTT+TGG - Chr8:56890661-56890680 None:intergenic 35.0%
!! GTGTCATTTGTATGACATTG+GGG + Chr8:56892178-56892197 MsG0880045283.01.T01:intron 35.0%
!! TTACTTAGCCTTATTGGGAT+TGG - Chr8:56888712-56888731 None:intergenic 35.0%
!! TTTTACATGGCTTGGAACAT+TGG + Chr8:56891203-56891222 MsG0880045283.01.T01:CDS 35.0%
!!! AAGGATACTTTGCTTTTTGC+AGG + Chr8:56891398-56891417 MsG0880045283.01.T01:CDS 35.0%
!!! AGGATACTTTGCTTTTTGCA+GGG + Chr8:56891399-56891418 MsG0880045283.01.T01:CDS 35.0%
!!! CTGTTGTTTTGGAAACCTTT+TGG - Chr8:56892364-56892383 None:intergenic 35.0%
!!! GGGATGAAATTTTTGGTGTT+TGG + Chr8:56894162-56894181 MsG0880045283.01.T01:three_prime_UTR 35.0%
!!! TGGATTTTTTCGCCACTATT+GGG + Chr8:56892860-56892879 MsG0880045283.01.T01:intron 35.0%
!!! TTCCTTGTTTTCTTCTGCTA+GGG - Chr8:56892126-56892145 None:intergenic 35.0%
!!! TTTCCTTGTTTTCTTCTGCT+AGG - Chr8:56892127-56892146 None:intergenic 35.0%
AAAACTCGCAACAACCATCT+AGG - Chr8:56887130-56887149 None:intergenic 40.0%
AAACTCGCAACAACCATCTA+GGG - Chr8:56887129-56887148 None:intergenic 40.0%
AAACTTGATGTTGTCAGGAC+CGG - Chr8:56889306-56889325 None:intergenic 40.0%
AAGAACCATGCTTCTAGCAT+TGG + Chr8:56887095-56887114 MsG0880045283.01.T01:CDS 40.0%
AATGCAATGGGAACTTCTGT+TGG + Chr8:56891242-56891261 MsG0880045283.01.T01:CDS 40.0%
ACATCTACCTTTGTCTGAAG+GGG + Chr8:56887343-56887362 MsG0880045283.01.T01:CDS 40.0%
ACGCAGTTTGCATCATACTA+TGG + Chr8:56892725-56892744 MsG0880045283.01.T01:intron 40.0%
ACTGCATGGGGGAAAATATT+AGG - Chr8:56893209-56893228 None:intergenic 40.0%
ACTGTATACAAACTGCATGG+GGG - Chr8:56893220-56893239 None:intergenic 40.0%
ACTTAGGACCTGATAGTAGA+TGG + Chr8:56891926-56891945 MsG0880045283.01.T01:intron 40.0%
AGGTTGGAAGATTCAGAAGA+AGG + Chr8:56887535-56887554 MsG0880045283.01.T01:CDS 40.0%
ATTAGTGTATGCGGCTACAT+GGG + Chr8:56892234-56892253 MsG0880045283.01.T01:intron 40.0%
CAAAGGTAGATGTAGAGAAC+TGG - Chr8:56887336-56887355 None:intergenic 40.0%
CAACATGCTGCAACAGAAAA+CGG + Chr8:56890999-56891018 MsG0880045283.01.T01:CDS 40.0%
CACAATCTAAGAAGAGGTTC+AGG + Chr8:56887459-56887478 MsG0880045283.01.T01:CDS 40.0%
CACTGTATACAAACTGCATG+GGG - Chr8:56893221-56893240 None:intergenic 40.0%
CCCAATTAAGCAAACGTTGA+AGG + Chr8:56889658-56889677 MsG0880045283.01.T01:intron 40.0%
CGAGATAGGTGTTAGATCTT+TGG - Chr8:56887246-56887265 None:intergenic 40.0%
CGGTTGATCTTTGGATCTTA+GGG + Chr8:56887828-56887847 MsG0880045283.01.T01:intron 40.0%
CTACATCTACCTTTGTCTGA+AGG + Chr8:56887341-56887360 MsG0880045283.01.T01:CDS 40.0%
CTCTGATATTACAGGTCCAA+AGG + Chr8:56893485-56893504 MsG0880045283.01.T01:CDS 40.0%
CTGCATGGGGGAAAATATTA+GGG - Chr8:56893208-56893227 None:intergenic 40.0%
GAAGATGTCCGAGTTGTTTA+CGG - Chr8:56893410-56893429 None:intergenic 40.0%
GAAGGAGATTTGTGCTTCAT+GGG + Chr8:56893935-56893954 MsG0880045283.01.T01:CDS 40.0%
GCACCAATTGCTGTATTTCT+CGG + Chr8:56893273-56893292 MsG0880045283.01.T01:CDS 40.0%
GCACTGTATACAAACTGCAT+GGG - Chr8:56893222-56893241 None:intergenic 40.0%
GGGACTCTTAACAAAAACCT+TGG + Chr8:56892084-56892103 MsG0880045283.01.T01:intron 40.0%
GGTCTTCACAATCTAAGAAG+AGG + Chr8:56887453-56887472 MsG0880045283.01.T01:CDS 40.0%
GGTGCATTAGCTATTCTACA+AGG + Chr8:56893624-56893643 MsG0880045283.01.T01:CDS 40.0%
GTGACTAGTACAATGCAGAA+GGG + Chr8:56891347-56891366 MsG0880045283.01.T01:CDS 40.0%
GTGTGTTAAGAGTCTCACAT+TGG - Chr8:56891873-56891892 None:intergenic 40.0%
GTTCTGTTTGCTTCGAAACT+AGG + Chr8:56893822-56893841 MsG0880045283.01.T01:CDS 40.0%
GTTGGAAAGTAAAGGCCAAA+AGG + Chr8:56892346-56892365 MsG0880045283.01.T01:intron 40.0%
TAAAATGCAAGAAACGACGC+TGG - Chr8:56888431-56888450 None:intergenic 40.0%
TAATGTCAGCGAAGAAGAGA+TGG + Chr8:56886947-56886966 MsG0880045283.01.T01:CDS 40.0%
TAGCAAGAGTGATTTCTTCG+TGG + Chr8:56892840-56892859 MsG0880045283.01.T01:intron 40.0%
TATTAGTGTATGCGGCTACA+TGG + Chr8:56892233-56892252 MsG0880045283.01.T01:intron 40.0%
TCACACCCCCAATATTTCAT+TGG - Chr8:56889041-56889060 None:intergenic 40.0%
TCATAGAAACTTCCACAGGA+AGG + Chr8:56887205-56887224 MsG0880045283.01.T01:CDS 40.0%
TCCGATTGATGTTCTTGCTT+GGG + Chr8:56893674-56893693 MsG0880045283.01.T01:CDS 40.0%
TCGAATTGGTCATCTATTGC+GGG + Chr8:56890102-56890121 MsG0880045283.01.T01:intron 40.0%
TCGGTTGATCTTTGGATCTT+AGG + Chr8:56887827-56887846 MsG0880045283.01.T01:intron 40.0%
TCTATGTGGGATAAAGGTTG+GGG + Chr8:56887855-56887874 MsG0880045283.01.T01:intron 40.0%
TGAAGAGAAAGAGTGGAAGT+AGG - Chr8:56890596-56890615 None:intergenic 40.0%
TGAAGGAGATTTGTGCTTCA+TGG + Chr8:56893934-56893953 MsG0880045283.01.T01:CDS 40.0%
TGAGTTACACGTGTATGGAT+TGG - Chr8:56890294-56890313 None:intergenic 40.0%
TGCACTGTATACAAACTGCA+TGG - Chr8:56893223-56893242 None:intergenic 40.0%
TGCATGGGGGAAAATATTAG+GGG - Chr8:56893207-56893226 None:intergenic 40.0%
TGGTTTCTATGTGAAGACTG+TGG + Chr8:56894182-56894201 MsG0880045283.01.T01:three_prime_UTR 40.0%
TGTCTACAAATGCATCCGAA+GGG + Chr8:56892901-56892920 MsG0880045283.01.T01:intron 40.0%
TGTGACTAGTACAATGCAGA+AGG + Chr8:56891346-56891365 MsG0880045283.01.T01:CDS 40.0%
TGTGGTGAAATTTGGAGAAG+AGG + Chr8:56894131-56894150 MsG0880045283.01.T01:three_prime_UTR 40.0%
TTCCGATTGATGTTCTTGCT+TGG + Chr8:56893673-56893692 MsG0880045283.01.T01:CDS 40.0%
TTGTCTACAAATGCATCCGA+AGG + Chr8:56892900-56892919 MsG0880045283.01.T01:intron 40.0%
! AAAAAAGGTGTAGGGCTACT+GGG + Chr8:56889116-56889135 MsG0880045283.01.T01:intron 40.0%
! ACACTAGTTGGTGCAGTAAT+GGG + Chr8:56893867-56893886 MsG0880045283.01.T01:CDS 40.0%
! ACATTGTATAGTGGGAGCAA+TGG + Chr8:56892766-56892785 MsG0880045283.01.T01:intron 40.0%
! ATCTTTTGCAGAAGGAGAAG+AGG + Chr8:56890941-56890960 MsG0880045283.01.T01:intron 40.0%
! ATGTTTGGTGAAAGTGGAAG+TGG - Chr8:56890870-56890889 None:intergenic 40.0%
! ATTCTTCGGAAGCACATTGA+AGG - Chr8:56888378-56888397 None:intergenic 40.0%
! GAGGACTTTTGTAACGAGAT+TGG + Chr8:56887572-56887591 MsG0880045283.01.T01:CDS 40.0%
! GCGTCGTTTCTTGCATTTTA+TGG + Chr8:56888431-56888450 MsG0880045283.01.T01:intron 40.0%
! GGACTTTTGTAACGAGATTG+GGG + Chr8:56887574-56887593 MsG0880045283.01.T01:CDS 40.0%
! GTAGGGTTTGGTCTAGTTTA+TGG + Chr8:56892788-56892807 MsG0880045283.01.T01:intron 40.0%
! TAAAAAAGGTGTAGGGCTAC+TGG + Chr8:56889115-56889134 MsG0880045283.01.T01:intron 40.0%
! TACACTAGTTGGTGCAGTAA+TGG + Chr8:56893866-56893885 MsG0880045283.01.T01:CDS 40.0%
! TCGGCAAGGGATGAAATTTT+TGG + Chr8:56894155-56894174 MsG0880045283.01.T01:three_prime_UTR 40.0%
! TCTTTTGCAGAAGGAGAAGA+GGG + Chr8:56890942-56890961 MsG0880045283.01.T01:intron 40.0%
! TGATCAATCATTTCGGTGTG+TGG + Chr8:56888079-56888098 MsG0880045283.01.T01:intron 40.0%
! TGTTGCGAGTTTTTATCTGC+TGG + Chr8:56887137-56887156 MsG0880045283.01.T01:CDS 40.0%
! TTCTTCGGAAGCACATTGAA+GGG - Chr8:56888377-56888396 None:intergenic 40.0%
!! AAAATGAAAGCGCTGGACTT+GGG + Chr8:56889060-56889079 MsG0880045283.01.T01:intron 40.0%
!! CTTAAGTGTCGGTTGATCTT+TGG + Chr8:56887819-56887838 MsG0880045283.01.T01:intron 40.0%
!! GACATCTTTAGGACAAGGTT+TGG + Chr8:56891136-56891155 MsG0880045283.01.T01:CDS 40.0%
!! TAGCCTTATTGGGATTGGTT+CGG - Chr8:56888707-56888726 None:intergenic 40.0%
!! TGAAGGGGGCTATATTTTGA+GGG + Chr8:56887358-56887377 MsG0880045283.01.T01:CDS 40.0%
!! TGATGATGGTGAAGAAAGAG+TGG - Chr8:56890573-56890592 None:intergenic 40.0%
!!! GTGGATTTTTTCGCCACTAT+TGG + Chr8:56892859-56892878 MsG0880045283.01.T01:intron 40.0%
!!! TGCTAATGTTTTTCAGGGGA+AGG + Chr8:56891379-56891398 MsG0880045283.01.T01:CDS 40.0%
!!! TTTTCAGGGGCATTGTTGAT+GGG + Chr8:56891317-56891336 MsG0880045283.01.T01:CDS 40.0%
!!! TTTTCCAATAGCTCTAAGCC+AGG + Chr8:56893338-56893357 MsG0880045283.01.T01:CDS 40.0%
AAACTAGGGCTACCGATATC+GGG + Chr8:56893837-56893856 MsG0880045283.01.T01:CDS 45.0%
AAAGTGGAAGTGGCTTCACA+TGG - Chr8:56890860-56890879 None:intergenic 45.0%
AACCTCCAATGCTAGAAGCA+TGG - Chr8:56887103-56887122 None:intergenic 45.0%
AACGATGTCTCCAACGCAAT+AGG + Chr8:56893591-56893610 MsG0880045283.01.T01:CDS 45.0%
AAGGAAGAGCTAAGTCTCTC+TGG - Chr8:56889604-56889623 None:intergenic 45.0%
AATGCCTGGCTTAGAGCTAT+TGG - Chr8:56893345-56893364 None:intergenic 45.0%
AATTGGTCATCTATTGCGGG+AGG + Chr8:56890105-56890124 MsG0880045283.01.T01:intron 45.0%
ACGCCGAGAAATACAGCAAT+TGG - Chr8:56893279-56893298 None:intergenic 45.0%
ACTGGGCTGAAGTCTGATAA+AGG + Chr8:56889133-56889152 MsG0880045283.01.T01:intron 45.0%
AGAACATAGCTCTTGCAACG+TGG + Chr8:56892063-56892082 MsG0880045283.01.T01:intron 45.0%
AGAGTGGAAGTAGGTGATGA+TGG - Chr8:56890587-56890606 None:intergenic 45.0%
AGTGTATGTGTCCCCGATAT+CGG - Chr8:56893852-56893871 None:intergenic 45.0%
ATATAGCCCCCTTCAGACAA+AGG - Chr8:56887353-56887372 None:intergenic 45.0%
ATGGGAACTTCTGTTGGATC+TGG + Chr8:56891248-56891267 MsG0880045283.01.T01:CDS 45.0%
ATTCTACAAGGCGCAGCAAA+AGG + Chr8:56893636-56893655 MsG0880045283.01.T01:CDS 45.0%
ATTGATGTTCTTGCTTGGGG+TGG + Chr8:56893678-56893697 MsG0880045283.01.T01:CDS 45.0%
ATTGGAGGTTATGCCCTAGA+TGG + Chr8:56887113-56887132 MsG0880045283.01.T01:CDS 45.0%
ATTGGTCATCTATTGCGGGA+GGG + Chr8:56890106-56890125 MsG0880045283.01.T01:intron 45.0%
CAGCAATTGTTTCCTTCCTG+TGG - Chr8:56887220-56887239 None:intergenic 45.0%
CATCTACCTTTGTCTGAAGG+GGG + Chr8:56887344-56887363 MsG0880045283.01.T01:CDS 45.0%
CATGTTGTCGAGCCTATCAA+CGG + Chr8:56887404-56887423 MsG0880045283.01.T01:CDS 45.0%
CCACGTGTAAATCACCGATA+AGG - Chr8:56893985-56894004 None:intergenic 45.0%
CCCCAAGCAAGAACATCAAT+CGG - Chr8:56893678-56893697 None:intergenic 45.0%
CCGATTGATGTTCTTGCTTG+GGG + Chr8:56893675-56893694 MsG0880045283.01.T01:CDS 45.0%
CCTGATAGTAGATGGTCCAA+CGG + Chr8:56891934-56891953 MsG0880045283.01.T01:intron 45.0%
CCTTATCGGTGATTTACACG+TGG + Chr8:56893982-56894001 MsG0880045283.01.T01:CDS 45.0%
CTAAGAAGAGGTTCAGGTCT+AGG + Chr8:56887465-56887484 MsG0880045283.01.T01:CDS 45.0%
CTCCCTAGCAGAAGAAAACA+AGG + Chr8:56892121-56892140 MsG0880045283.01.T01:intron 45.0%
GAAACTAGGGCTACCGATAT+CGG + Chr8:56893836-56893855 MsG0880045283.01.T01:CDS 45.0%
GAACATAGCTCTTGCAACGT+GGG + Chr8:56892064-56892083 MsG0880045283.01.T01:intron 45.0%
GAAGGATGAGAATGTTGTCG+AGG + Chr8:56887553-56887572 MsG0880045283.01.T01:CDS 45.0%
GAGTCCTATGTTCCTAACCA+AGG - Chr8:56892104-56892123 None:intergenic 45.0%
GCATTAACGAGCTTACCCTT+CGG - Chr8:56892919-56892938 None:intergenic 45.0%
GTAATAATCACCTCGCTAGC+CGG - Chr8:56892022-56892041 None:intergenic 45.0%
GTATACAGTGCAAGTAACCC+AGG + Chr8:56893231-56893250 MsG0880045283.01.T01:CDS 45.0%
GTCTCTCTGGTGCTTACTAT+TGG - Chr8:56889591-56889610 None:intergenic 45.0%
TGAAGGGGGGCTTAGAAAAA+GGG + Chr8:56891681-56891700 MsG0880045283.01.T01:intron 45.0%
TTCATGGGCGGTTACTATTC+CGG + Chr8:56893950-56893969 MsG0880045283.01.T01:CDS 45.0%
TTGAAGGGGGGCTTAGAAAA+AGG + Chr8:56891680-56891699 MsG0880045283.01.T01:intron 45.0%
! AACCATGCTTCTAGCATTGG+AGG + Chr8:56887098-56887117 MsG0880045283.01.T01:CDS 45.0%
! AGGAGCTGGAGCTGTATTTT+GGG + Chr8:56892811-56892830 MsG0880045283.01.T01:intron 45.0%
! CAATCATTTCGGTGTGTGGA+AGG + Chr8:56888083-56888102 MsG0880045283.01.T01:intron 45.0%
! CATGGAGCACTAAACGAGAT+AGG - Chr8:56887260-56887279 None:intergenic 45.0%
! CGGAGTTTTCGGTTATATGC+AGG + Chr8:56893530-56893549 MsG0880045283.01.T01:CDS 45.0%
! CGTTTTCTGTTGCAGCATGT+TGG - Chr8:56891001-56891020 None:intergenic 45.0%
! CTGAAGGGGGCTATATTTTG+AGG + Chr8:56887357-56887376 MsG0880045283.01.T01:CDS 45.0%
! GATCTGGTGCATTGTCACTT+AGG + Chr8:56891264-56891283 MsG0880045283.01.T01:CDS 45.0%
! GGGTTTGGTCTAGTTTATGG+AGG + Chr8:56892791-56892810 MsG0880045283.01.T01:intron 45.0%
! GTATAGTGGGAGCAATGGTA+GGG + Chr8:56892771-56892790 MsG0880045283.01.T01:intron 45.0%
! GTGGATTTGGAATCGTTGCA+GGG + Chr8:56893697-56893716 MsG0880045283.01.T01:CDS 45.0%
! TACGGATAGTTCTGTTGACC+AGG - Chr8:56893392-56893411 None:intergenic 45.0%
! TGTATAGTGGGAGCAATGGT+AGG + Chr8:56892770-56892789 MsG0880045283.01.T01:intron 45.0%
! TTCATGTCATTTGCTCACGG+TGG + Chr8:56893567-56893586 MsG0880045283.01.T01:CDS 45.0%
! TTCTACAACCAGAGCACCAA+GGG + Chr8:56887301-56887320 MsG0880045283.01.T01:CDS 45.0%
! TTTGGGGTGTTAGCATAGCT+GGG - Chr8:56888608-56888627 None:intergenic 45.0%
!! AAATGAAAGCGCTGGACTTG+GGG + Chr8:56889061-56889080 MsG0880045283.01.T01:intron 45.0%
!! CTGATAGCGGTGACTAACTT+AGG + Chr8:56891910-56891929 MsG0880045283.01.T01:intron 45.0%
!! CTGCAGTGTTGGAGTTTTCA+GGG + Chr8:56891303-56891322 MsG0880045283.01.T01:CDS 45.0%
!! GAAAATGAAAGCGCTGGACT+TGG + Chr8:56889059-56889078 MsG0880045283.01.T01:intron 45.0%
!! GTAGATGGTCCAACGGATTT+TGG + Chr8:56891941-56891960 MsG0880045283.01.T01:intron 45.0%
!! TAGAAGGAGTTGGTGCTTGA+GGG - Chr8:56887286-56887305 None:intergenic 45.0%
!! TGCAGTGTTGGAGTTTTCAG+GGG + Chr8:56891304-56891323 MsG0880045283.01.T01:CDS 45.0%
!!! AAGCTTATGTTTTGGGGGAC+GGG - Chr8:56893462-56893481 None:intergenic 45.0%
!!! GAAGCTTATGTTTTGGGGGA+CGG - Chr8:56893463-56893482 None:intergenic 45.0%
!!! GTTTTCAGGGGCATTGTTGA+TGG + Chr8:56891316-56891335 MsG0880045283.01.T01:CDS 45.0%
!!! TTTTGGGGTGTTAGCATAGC+TGG - Chr8:56888609-56888628 None:intergenic 45.0%
!! AATAATAATAATAATAAGTA+TGG + Chr8:56887769-56887788 MsG0880045283.01.T01:intron 5.0%
!! GATTTAATAATATAATAATA+TGG - Chr8:56888863-56888882 None:intergenic 5.0%
!!! AATTTGTTTTTTTTATTATT+CGG - Chr8:56888935-56888954 None:intergenic 5.0%
!!! CTTTTTAATTAATAATATAT+AGG - Chr8:56888657-56888676 None:intergenic 5.0%
AACGCAATAGGTCCATTGGC+CGG + Chr8:56893603-56893622 MsG0880045283.01.T01:CDS 50.0%
AACTAGGGCTACCGATATCG+GGG + Chr8:56893838-56893857 MsG0880045283.01.T01:CDS 50.0%
AAGGAAGCGACATCGTTTGG+TGG - Chr8:56889424-56889443 None:intergenic 50.0%
ACCAAGGAAGCGACATCGTT+TGG - Chr8:56889427-56889446 None:intergenic 50.0%
ACCGATAAGGTAGCACCAAC+CGG - Chr8:56893972-56893991 None:intergenic 50.0%
ACGGAACTTACACCGACAAG+AGG + Chr8:56893768-56893787 MsG0880045283.01.T01:CDS 50.0%
AGGATTTGCAGCCGAGTTTG+CGG + Chr8:56893788-56893807 MsG0880045283.01.T01:CDS 50.0%
ATCAGTCTTGAGCGTGAGGA+GGG - Chr8:56891895-56891914 None:intergenic 50.0%
CAAGAAACGACGCTGGACAT+TGG - Chr8:56888424-56888443 None:intergenic 50.0%
CAGCGAAGAAGAGATGGTGA+TGG + Chr8:56886953-56886972 MsG0880045283.01.T01:CDS 50.0%
CCGTTGGACCATCTACTATC+AGG - Chr8:56891937-56891956 None:intergenic 50.0%
CGTTGCAGGGCTAATGATGT+GGG + Chr8:56893710-56893729 MsG0880045283.01.T01:CDS 50.0%
CTCACGCTCAAGACTGATAG+CGG + Chr8:56891897-56891916 MsG0880045283.01.T01:intron 50.0%
CTCCAACGCAATAGGTCCAT+TGG + Chr8:56893599-56893618 MsG0880045283.01.T01:CDS 50.0%
GATACTGCTGCTCCCAATAG+TGG - Chr8:56892875-56892894 None:intergenic 50.0%
GCTAAGTGGGAAAGCAGCAA+AGG - Chr8:56893313-56893332 None:intergenic 50.0%
GCTCTGGTTGTAGAAGGAGT+TGG - Chr8:56887296-56887315 None:intergenic 50.0%
GCTGTATTTCTCGGCGTAAC+TGG + Chr8:56893282-56893301 MsG0880045283.01.T01:CDS 50.0%
GGAGATTTGTGCTTCATGGG+CGG + Chr8:56893938-56893957 MsG0880045283.01.T01:CDS 50.0%
GTGGTGCATGAAGCTTCTTG+AGG - Chr8:56890482-56890501 None:intergenic 50.0%
GTTGCAGGGCTAATGATGTG+GGG + Chr8:56893711-56893730 MsG0880045283.01.T01:CDS 50.0%
TATCAGTCTTGAGCGTGAGG+AGG - Chr8:56891896-56891915 None:intergenic 50.0%
TCAGTACCACCACCGTTGAT+AGG - Chr8:56887419-56887438 None:intergenic 50.0%
TCGGCTGCAAATCCTCTTGT+CGG - Chr8:56893783-56893802 None:intergenic 50.0%
TCGGGGACACATACACTAGT+TGG + Chr8:56893855-56893874 MsG0880045283.01.T01:CDS 50.0%
TCGTTGCAGGGCTAATGATG+TGG + Chr8:56893709-56893728 MsG0880045283.01.T01:CDS 50.0%
TGCTGCTGGTACTTGGTTAC+AGG + Chr8:56891439-56891458 MsG0880045283.01.T01:CDS 50.0%
TTGGAGAAGAGGATCGGCAA+GGG + Chr8:56894142-56894161 MsG0880045283.01.T01:three_prime_UTR 50.0%
TTTGGAGAAGAGGATCGGCA+AGG + Chr8:56894141-56894160 MsG0880045283.01.T01:three_prime_UTR 50.0%
! ACCAAACGATGTCGCTTCCT+TGG + Chr8:56889423-56889442 MsG0880045283.01.T01:intron 50.0%
! ATAGCTAATGCACCGGCCAA+TGG - Chr8:56893618-56893637 None:intergenic 50.0%
! ATCAACGGTGGTGGTACTGA+TGG + Chr8:56887419-56887438 MsG0880045283.01.T01:CDS 50.0%
! ATTTTGCTGGGGCACAAGGT+TGG + Chr8:56887519-56887538 MsG0880045283.01.T01:CDS 50.0%
! CTAAGCCAGGCATTAGCTTG+TGG + Chr8:56893351-56893370 MsG0880045283.01.T01:CDS 50.0%
! CTTCTACAACCAGAGCACCA+AGG + Chr8:56887300-56887319 MsG0880045283.01.T01:CDS 50.0%
! CTTGATTTTGCTGGGGCACA+AGG + Chr8:56887515-56887534 MsG0880045283.01.T01:CDS 50.0%
! CTTTCTTCACTTGCTGCTGC+TGG + Chr8:56891425-56891444 MsG0880045283.01.T01:CDS 50.0%
! GAGGAGCTGGAGCTGTATTT+TGG + Chr8:56892810-56892829 MsG0880045283.01.T01:intron 50.0%
! GGAGCTGGAGCTGTATTTTG+GGG + Chr8:56892812-56892831 MsG0880045283.01.T01:intron 50.0%
! GGGTGTGAAAATGAAAGCGC+TGG + Chr8:56889053-56889072 MsG0880045283.01.T01:intron 50.0%
! GGTCTAGTTTATGGAGGAGC+TGG + Chr8:56892797-56892816 MsG0880045283.01.T01:intron 50.0%
! GGTGGATTTGGAATCGTTGC+AGG + Chr8:56893696-56893715 MsG0880045283.01.T01:CDS 50.0%
! GTTCTTGCTTGGGGTGGATT+TGG + Chr8:56893684-56893703 MsG0880045283.01.T01:CDS 50.0%
! GTTGGTGCAGTAATGGGAGT+TGG + Chr8:56893873-56893892 MsG0880045283.01.T01:CDS 50.0%
! TCTACAACCAGAGCACCAAG+GGG + Chr8:56887302-56887321 MsG0880045283.01.T01:CDS 50.0%
! TGTGTTGACAGCTGCAGTGT+TGG + Chr8:56891292-56891311 MsG0880045283.01.T01:CDS 50.0%
!! AGGGGGCTATATTTTGAGGG+AGG + Chr8:56887361-56887380 MsG0880045283.01.T01:CDS 50.0%
!! ATTAGCTTGTGGAACCGTCG+GGG + Chr8:56893362-56893381 MsG0880045283.01.T01:CDS 50.0%
!! CATTAGCTTGTGGAACCGTC+GGG + Chr8:56893361-56893380 MsG0880045283.01.T01:CDS 50.0%
!! CTTGGTGCTCTGGTTGTAGA+AGG - Chr8:56887302-56887321 None:intergenic 50.0%
!! GCATTAGCTTGTGGAACCGT+CGG + Chr8:56893360-56893379 MsG0880045283.01.T01:CDS 50.0%
!! GCTGCAGTGTTGGAGTTTTC+AGG + Chr8:56891302-56891321 MsG0880045283.01.T01:CDS 50.0%
!! GTACTGATGGTGGTGGAGAA+GGG + Chr8:56887432-56887451 MsG0880045283.01.T01:CDS 50.0%
!! GTAGAAGGAGTTGGTGCTTG+AGG - Chr8:56887287-56887306 None:intergenic 50.0%
!! TCCGGTTGGTGCTACCTTAT+CGG + Chr8:56893968-56893987 MsG0880045283.01.T01:CDS 50.0%
ATGGGAGTTGGATTCGCGAG+AGG + Chr8:56893885-56893904 MsG0880045283.01.T01:CDS 55.0%
CCTTACAAAACCGGCTAGCG+AGG + Chr8:56892009-56892028 MsG0880045283.01.T01:intron 55.0%
CGAAGCAAACAGAACCACCG+AGG - Chr8:56893817-56893836 None:intergenic 55.0%
CGCTATCAGTCTTGAGCGTG+AGG - Chr8:56891899-56891918 None:intergenic 55.0%
CGGTTCCACAAGCTAATGCC+TGG - Chr8:56893359-56893378 None:intergenic 55.0%
CTAGGGTCCATGCTCGTAGA+GGG - Chr8:56889253-56889272 None:intergenic 55.0%
GGCCAATGGACCTATTGCGT+TGG - Chr8:56893604-56893623 None:intergenic 55.0%
GGGCCGAACCAATCCCAATA+AGG + Chr8:56888701-56888720 MsG0880045283.01.T01:intron 55.0%
GTCATCTATTGCGGGAGGGA+GGG + Chr8:56890110-56890129 MsG0880045283.01.T01:intron 55.0%
GTGGGAGCAATGGTAGGGTT+TGG + Chr8:56892776-56892795 MsG0880045283.01.T01:intron 55.0%
GTTGTCGAGCCTATCAACGG+TGG + Chr8:56887407-56887426 MsG0880045283.01.T01:CDS 55.0%
TGGGCGGTTACTATTCCGGT+TGG + Chr8:56893954-56893973 MsG0880045283.01.T01:CDS 55.0%
! CACTTGCTGCTGCTGGTACT+TGG + Chr8:56891432-56891451 MsG0880045283.01.T01:CDS 55.0%
! TTTTCCGCCCTCTACGAGCA+TGG + Chr8:56889243-56889262 MsG0880045283.01.T01:intron 55.0%
!! AACGGTGGTGGTACTGATGG+TGG + Chr8:56887422-56887441 MsG0880045283.01.T01:CDS 55.0%
!! AAGGAGTTGGTGCTTGAGGG+AGG - Chr8:56887283-56887302 None:intergenic 55.0%
!! CCTCGCTAGCCGGTTTTGTA+AGG - Chr8:56892012-56892031 None:intergenic 55.0%
!! GGTACTGATGGTGGTGGAGA+AGG + Chr8:56887431-56887450 MsG0880045283.01.T01:CDS 55.0%
ATGTTGTCAGGACCGGCCCT+AGG - Chr8:56889299-56889318 None:intergenic 60.0%
CCTAGGGTCCATGCTCGTAG+AGG - Chr8:56889254-56889273 None:intergenic 60.0%
CCTCTACGAGCATGGACCCT+AGG + Chr8:56889251-56889270 MsG0880045283.01.T01:intron 60.0%
CTAGGGTTAGACCAGGGGTG+CGG - Chr8:56889281-56889300 None:intergenic 60.0%
GCACCCCTGGTCTAACCCTA+GGG + Chr8:56889280-56889299 MsG0880045283.01.T01:intron 60.0%
GGTCATCTATTGCGGGAGGG+AGG + Chr8:56890109-56890128 MsG0880045283.01.T01:intron 60.0%
GTCGAGCCTATCAACGGTGG+TGG + Chr8:56887410-56887429 MsG0880045283.01.T01:CDS 60.0%
GTTGACCAGGAAAGCCCCGA+CGG - Chr8:56893379-56893398 None:intergenic 60.0%
TGTTGTCAGGACCGGCCCTA+GGG - Chr8:56889298-56889317 None:intergenic 60.0%
! CTGCAGCTGCTGCTTGTCCT+GGG - Chr8:56893251-56893270 None:intergenic 60.0%
! GTTGGTGCTTGAGGGAGGCA+TGG - Chr8:56887278-56887297 None:intergenic 60.0%
! TGGGGGACGGGTTCCAAATG+TGG - Chr8:56893450-56893469 None:intergenic 60.0%
!! GGTGGTGGTACTGATGGTGG+TGG + Chr8:56887425-56887444 MsG0880045283.01.T01:CDS 60.0%
ACCGGCCCTAGGGTTAGACC+AGG - Chr8:56889288-56889307 None:intergenic 65.0%
AGCCGAGTTTGCGGCTGCCT+CGG + Chr8:56893797-56893816 MsG0880045283.01.T01:CDS 65.0%
CACCGAGGCAGCCGCAAACT+CGG - Chr8:56893802-56893821 None:intergenic 65.0%
CCCTGGTCTAACCCTAGGGC+CGG + Chr8:56889284-56889303 MsG0880045283.01.T01:intron 65.0%
CCGGCCCTAGGGTTAGACCA+GGG - Chr8:56889287-56889306 None:intergenic 65.0%
CGCACCCCTGGTCTAACCCT+AGG + Chr8:56889279-56889298 MsG0880045283.01.T01:intron 65.0%
CGGCCCTAGGGTTAGACCAG+GGG - Chr8:56889286-56889305 None:intergenic 65.0%
GAACTGGTCGTCGTGCCCCT+TGG - Chr8:56887320-56887339 None:intergenic 65.0%
GGGTCCATGCTCGTAGAGGG+CGG - Chr8:56889250-56889269 None:intergenic 65.0%
TGGAACCGTCGGGGCTTTCC+TGG + Chr8:56893371-56893390 MsG0880045283.01.T01:CDS 65.0%
! GCTGCAGCTGCTGCTTGTCC+TGG - Chr8:56893252-56893271 None:intergenic 65.0%
CGAGTTTGCGGCTGCCTCGG+TGG + Chr8:56893800-56893819 MsG0880045283.01.T01:CDS 70.0%
! GGTTAGACCAGGGGTGCGGC+AGG - Chr8:56889277-56889296 None:intergenic 70.0%
!! CGTCGTGCCCCTTGGTGCTC+TGG - Chr8:56887312-56887331 None:intergenic 70.0%
! ACCAGGGGTGCGGCAGGCCT+AGG - Chr8:56889271-56889290 None:intergenic 75.0%
! CCAGGGGTGCGGCAGGCCTA+GGG - Chr8:56889270-56889289 None:intergenic 75.0%
! CCCTAGGCCTGCCGCACCCC+TGG + Chr8:56889267-56889286 MsG0880045283.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 56886924 56894481 56886924 ID=MsG0880045283.01;Name=MsG0880045283.01
Chr8 mRNA 56886924 56894481 56886924 ID=MsG0880045283.01.T01;Parent=MsG0880045283.01;Name=MsG0880045283.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0.33|1|1|1|3|444|680
Chr8 exon 56886924 56887647 56886924 ID=MsG0880045283.01.T01:exon:1192;Parent=MsG0880045283.01.T01
Chr8 exon 56890952 56891460 56890952 ID=MsG0880045283.01.T01:exon:1193;Parent=MsG0880045283.01.T01
Chr8 exon 56893228 56894481 56893228 ID=MsG0880045283.01.T01:exon:1194;Parent=MsG0880045283.01.T01
Chr8 CDS 56886924 56887647 56886924 ID=MsG0880045283.01.T01:cds;Parent=MsG0880045283.01.T01
Chr8 CDS 56890952 56891460 56890952 ID=MsG0880045283.01.T01:cds;Parent=MsG0880045283.01.T01
Chr8 CDS 56893228 56894037 56893228 ID=MsG0880045283.01.T01:cds;Parent=MsG0880045283.01.T01
Chr8 three_prime_UTR 56894038 56894481 56894038 ID=MsG0880045283.01.T01:three_prime_utr;Parent=MsG0880045283.01.T01
Gene Sequence

>MsG0880045283.01.T01

ATGTTAAGTGGGCAAGTGCGAAGTAATGTCAGCGAAGAAGAGATGGTGATGGCTAATGAAGTCAACGAAGTGATGATTAACTCACCACAAGAGAAAATATCAACTCAAGTTGAAGAATATCATACAAATTCTGGAAGAAATAGTTTCAGTGTAAATTTCAAGGAATGTTTAAAGAACCATGCTTCTAGCATTGGAGGTTATGCCCTAGATGGTTGTTGCGAGTTTTTATCTGCTGGAGATGAAGGTACCGTCGAATTTTTTAAATGTGGTGCTTGTGATTGTCATAGAAACTTCCACAGGAAGGAAACAATTGCTGTTTCCAAAGATCTAACACCTATCTCGTTTAGTGCTCCATGCCTCCCTCAAGCACCAACTCCTTCTACAACCAGAGCACCAAGGGGCACGACGACCAGTTCTCTACATCTACCTTTGTCTGAAGGGGGCTATATTTTGAGGGAGGATCTTGAACAAAATGTTCATCATGTTGTCGAGCCTATCAACGGTGGTGGTACTGATGGTGGTGGAGAAGGGTCTTCACAATCTAAGAAGAGGTTCAGGTCTAGGTTCACATATGAACAACGTGAAAAAATGCTTGATTTTGCTGGGGCACAAGGTTGGAAGATTCAGAAGAAGGATGAGAATGTTGTCGAGGACTTTTGTAACGAGATTGGGGTGAAGCTTAAAGTTTTTAAGGCTTGGGTTCAAAATAACAAACATACCCTTGAAGGAGAAGAGGGTTCAAAAGAAGAAATTCAGCACAATGAACATCACCAACATGCTGCAACAGAAAACGGAGAGAATAACGATGAAGTATCAGGAATGGCTAAAGCATTTCACATATCATCAAGAACAGCTTCTGCTATAACAATATGTATAGTAATGGCTGCACTTGTTTTTCCTTTGTTTATGACATCTTTAGGACAAGGTTTGGCATTGAAGACAAAGATGTTATCATATGGAACACTTTTGTTTGGATTTTACATGGCTTGGAACATTGGTGCTAATGATGTTGCAAATGCAATGGGAACTTCTGTTGGATCTGGTGCATTGTCACTTAGGCAAGCTGTGTTGACAGCTGCAGTGTTGGAGTTTTCAGGGGCATTGTTGATGGGAACTCATGTGACTAGTACAATGCAGAAGGGAATTCTTGTTGCTAATGTTTTTCAGGGGAAGGATACTTTGCTTTTTGCAGGGTTGCTTTCTTCACTTGCTGCTGCTGGTACTTGGTTACAGTTTGTATACAGTGCAAGTAACCCAGGACAAGCAGCAGCTGCAGCAGCACCAATTGCTGTATTTCTCGGCGTAACTGGAATTTCCTTTGCTGCTTTCCCACTTAGCAAGATTTTTCCAATAGCTCTAAGCCAGGCATTAGCTTGTGGAACCGTCGGGGCTTTCCTGGTCAACAGAACTATCCGTAAACAACTCGGACATCTTCTAGACAAGTCAAATACTCCACATTTGGAACCCGTCCCCCAAAACATAAGCTTCTTCTCTGATATTACAGGTCCAAAGGGTACTCAACTTGAAATAGTTTACGGAGTTTTCGGTTATATGCAGGTTTTATCAGCGTGTTTCATGTCATTTGCTCACGGTGGAAACGATGTCTCCAACGCAATAGGTCCATTGGCCGGTGCATTAGCTATTCTACAAGGCGCAGCAAAAGGAGCTGATATAGTTATTCCGATTGATGTTCTTGCTTGGGGTGGATTTGGAATCGTTGCAGGGCTAATGATGTGGGGTTACAGAGTTATAGCTACAATTGGAAAGAAAATAACGGAACTTACACCGACAAGAGGATTTGCAGCCGAGTTTGCGGCTGCCTCGGTGGTTCTGTTTGCTTCGAAACTAGGGCTACCGATATCGGGGACACATACACTAGTTGGTGCAGTAATGGGAGTTGGATTCGCGAGAGGATTTAACAATGTTAGATCAGAAACAGTGAAGGAGATTTGTGCTTCATGGGCGGTTACTATTCCGGTTGGTGCTACCTTATCGGTGATTTACACGTGGATTTTGACTAAGCTTTTGTCTTATGTTTTATGA

Protein sequence

>MsG0880045283.01.T01

MLSGQVRSNVSEEEMVMANEVNEVMINSPQEKISTQVEEYHTNSGRNSFSVNFKECLKNHASSIGGYALDGCCEFLSAGDEGTVEFFKCGACDCHRNFHRKETIAVSKDLTPISFSAPCLPQAPTPSTTRAPRGTTTSSLHLPLSEGGYILREDLEQNVHHVVEPINGGGTDGGGEGSSQSKKRFRSRFTYEQREKMLDFAGAQGWKIQKKDENVVEDFCNEIGVKLKVFKAWVQNNKHTLEGEEGSKEEIQHNEHHQHAATENGENNDEVSGMAKAFHISSRTASAITICIVMAALVFPLFMTSLGQGLALKTKMLSYGTLLFGFYMAWNIGANDVANAMGTSVGSGALSLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVANVFQGKDTLLFAGLLSSLAAAGTWLQFVYSASNPGQAAAAAAPIAVFLGVTGISFAAFPLSKIFPIALSQALACGTVGAFLVNRTIRKQLGHLLDKSNTPHLEPVPQNISFFSDITGPKGTQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAGALAILQGAAKGADIVIPIDVLAWGGFGIVAGLMMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISGTHTLVGAVMGVGFARGFNNVRSETVKEICASWAVTIPVGATLSVIYTWILTKLLSYVL*