AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007688.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007688.01.T01 MTR_2g029910 82.436 353 58 2 1 349 1 353 0.0 583
MsG0280007688.01.T01 MTR_2g029850 78.286 350 72 2 4 349 3 352 0.0 538
MsG0280007688.01.T01 MTR_2g029820 67.139 353 109 1 4 349 3 355 2.27e-177 496
MsG0280007688.01.T01 MTR_2g029800 68.091 351 107 1 4 349 3 353 1.14e-174 489
MsG0280007688.01.T01 MTR_2g029860 71.347 349 93 3 7 349 6 353 2.87e-174 488
MsG0280007688.01.T01 MTR_2g029815 65.429 350 117 1 4 349 3 352 2.99e-169 475
MsG0280007688.01.T01 MTR_2g029740 67.372 331 108 0 4 334 3 333 1.76e-162 458
MsG0280007688.01.T01 MTR_2g028980 64.387 351 119 2 4 348 3 353 1.53e-161 456
MsG0280007688.01.T01 MTR_2g029830 70.192 312 93 0 23 334 21 332 3.84e-161 455
MsG0280007688.01.T01 MTR_2g029750 66.163 331 112 0 4 334 3 333 9.14e-160 451
MsG0280007688.01.T01 MTR_2g029560 60.345 348 130 3 4 349 3 344 8.34e-145 413
MsG0280007688.01.T01 MTR_2g029730 59.885 349 131 4 4 349 3 345 2.87e-140 402
MsG0280007688.01.T01 MTR_2g029830 69.615 260 79 0 75 334 5 264 2.84e-130 374
MsG0280007688.01.T01 MTR_7g093370 58.632 307 126 1 26 331 65 371 1.88e-123 360
MsG0280007688.01.T01 MTR_1g054205 58.252 309 128 1 24 331 18 326 1.67e-121 353
MsG0280007688.01.T01 MTR_2g029880 78.873 213 32 3 140 349 7 209 5.30e-112 325
MsG0280007688.01.T01 MTR_8g076820 50.495 303 149 1 30 332 30 331 1.02e-104 311
MsG0280007688.01.T01 MTR_5g021060 50.000 302 150 1 30 331 30 330 5.72e-102 303
MsG0280007688.01.T01 MTR_4g125940 50.000 324 156 3 13 332 9 330 1.12e-101 303
MsG0280007688.01.T01 MTR_1g022970 49.007 302 154 0 30 331 46 347 2.00e-97 293
MsG0280007688.01.T01 MTR_4g029180 50.831 301 137 4 33 331 30 321 2.24e-96 289
MsG0280007688.01.T01 MTR_4g029170 47.484 318 156 4 16 331 13 321 2.87e-96 289
MsG0280007688.01.T01 MTR_2g040000 48.208 307 154 2 29 332 28 332 5.31e-96 288
MsG0280007688.01.T01 MTR_4g029200 45.955 309 158 2 23 331 39 338 4.26e-95 286
MsG0280007688.01.T01 MTR_7g072510 43.865 326 167 3 6 331 3 312 7.50e-95 285
MsG0280007688.01.T01 MTR_2g084090 46.429 308 155 3 25 331 20 318 2.67e-94 283
MsG0280007688.01.T01 MTR_2g084080 44.479 326 169 3 9 331 1 317 8.27e-94 282
MsG0280007688.01.T01 MTR_5g017850 48.693 306 151 4 28 331 25 326 9.08e-94 283
MsG0280007688.01.T01 MTR_5g017860 47.213 305 157 3 28 331 25 326 5.57e-93 280
MsG0280007688.01.T01 MTR_4g083710 45.509 334 169 4 1 331 1 324 5.76e-93 280
MsG0280007688.01.T01 MTR_2g084110 46.254 307 156 2 25 331 20 317 5.84e-93 280
MsG0280007688.01.T01 MTR_4g029190 46.429 308 153 4 27 331 42 340 1.80e-92 280
MsG0280007688.01.T01 MTR_4g125940 53.261 276 125 2 59 332 2 275 5.93e-92 276
MsG0280007688.01.T01 MTR_2g084020 45.277 307 160 2 25 331 20 318 1.97e-91 276
MsG0280007688.01.T01 MTR_3g094650 45.679 324 161 4 6 327 8 318 4.74e-91 275
MsG0280007688.01.T01 MTR_3g466200 45.370 324 161 5 11 331 10 320 8.71e-91 275
MsG0280007688.01.T01 MTR_7g072480 47.697 304 150 2 28 331 22 316 9.32e-91 275
MsG0280007688.01.T01 MTR_2g084010 43.653 323 174 2 9 331 4 318 1.23e-90 274
MsG0280007688.01.T01 MTR_2g084000 45.425 306 157 3 27 331 23 319 6.92e-89 270
MsG0280007688.01.T01 MTR_4g122640 43.377 302 168 2 30 331 38 336 7.75e-89 270
MsG0280007688.01.T01 MTR_3g072190 45.215 303 157 2 29 331 25 318 1.33e-88 269
MsG0280007688.01.T01 MTR_3g467600 45.955 309 157 3 26 331 23 324 6.30e-88 268
MsG0280007688.01.T01 MTR_5g049280 43.450 313 172 5 24 332 27 338 3.79e-87 266
MsG0280007688.01.T01 MTR_5g074740 45.307 309 158 4 28 333 23 323 3.86e-87 265
MsG0280007688.01.T01 MTR_5g014100 44.884 303 163 2 33 331 29 331 1.31e-86 265
MsG0280007688.01.T01 MTR_5g074970 44.444 324 167 4 12 331 12 326 1.57e-86 264
MsG0280007688.01.T01 MTR_5g074760 43.713 334 172 5 1 331 1 321 1.88e-86 264
MsG0280007688.01.T01 MTR_5g074860 44.410 322 168 4 12 330 11 324 2.60e-86 263
MsG0280007688.01.T01 MTR_4g074995 46.104 308 143 4 27 331 21 308 3.28e-86 263
MsG0280007688.01.T01 MTR_4g030890 43.322 307 169 3 25 331 95 396 9.38e-85 263
MsG0280007688.01.T01 MTR_5g083860 43.260 319 166 4 15 331 20 325 3.76e-84 258
MsG0280007688.01.T01 MTR_4g031140 42.157 306 172 3 26 331 24 324 4.84e-84 258
MsG0280007688.01.T01 MTR_5g074710 44.984 309 159 4 28 333 23 323 6.91e-84 257
MsG0280007688.01.T01 MTR_3g094630 44.985 329 164 5 6 331 8 322 8.41e-84 257
MsG0280007688.01.T01 MTR_2g088770 44.025 318 172 5 16 331 12 325 1.41e-83 256
MsG0280007688.01.T01 MTR_3g466180 42.540 315 172 2 17 331 18 323 1.66e-83 256
MsG0280007688.01.T01 MTR_3g094670 43.519 324 168 4 6 327 8 318 4.86e-83 255
MsG0280007688.01.T01 MTR_1g115900 40.625 320 179 4 14 331 11 321 4.15e-82 253
MsG0280007688.01.T01 MTR_4g046713 41.994 331 182 5 2 331 5 326 5.13e-82 253
MsG0280007688.01.T01 MTR_4g074990 42.857 329 159 5 6 331 3 305 2.52e-80 248
MsG0280007688.01.T01 MTR_4g133800 44.667 300 155 6 35 333 46 335 3.12e-80 248
MsG0280007688.01.T01 MTR_7g107520 43.125 320 176 4 12 331 7 320 3.58e-79 245
MsG0280007688.01.T01 MTR_3g092990 39.755 327 191 3 7 332 6 327 1.20e-78 244
MsG0280007688.01.T01 MTR_1g101830 41.830 306 172 4 26 331 23 322 1.31e-78 244
MsG0280007688.01.T01 MTR_5g016010 40.361 332 189 5 3 330 2 328 5.50e-77 239
MsG0280007688.01.T01 MTR_8g075100 40.968 310 169 8 25 331 21 319 1.96e-76 238
MsG0280007688.01.T01 MTR_4g074980 41.718 326 156 7 6 331 3 294 1.23e-75 235
MsG0280007688.01.T01 MTR_5g022870 40.584 308 173 7 25 331 18 316 1.32e-75 236
MsG0280007688.01.T01 MTR_7g026990 37.082 329 197 3 3 331 4 322 2.96e-75 235
MsG0280007688.01.T01 MTR_4g114210 40.938 320 177 6 17 331 8 320 4.35e-74 232
MsG0280007688.01.T01 MTR_1g086320 38.024 334 196 5 5 331 4 333 1.03e-73 231
MsG0280007688.01.T01 MTR_1g086490 37.427 342 198 5 5 333 4 342 1.37e-73 231
MsG0280007688.01.T01 MTR_7g086820 38.816 304 177 5 28 331 18 312 5.69e-73 229
MsG0280007688.01.T01 MTR_2g437770 42.667 300 160 7 33 331 53 341 1.28e-72 229
MsG0280007688.01.T01 MTR_4g074980 45.174 259 131 3 6 261 3 253 1.58e-72 226
MsG0280007688.01.T01 MTR_1g009750 40.656 305 177 2 29 331 26 328 3.64e-72 227
MsG0280007688.01.T01 MTR_7g029030 41.987 312 165 6 25 331 20 320 5.48e-72 226
MsG0280007688.01.T01 MTR_6g043280 38.571 350 172 8 9 332 1 333 9.04e-72 226
MsG0280007688.01.T01 MTR_4g132490 38.554 332 198 4 1 331 1 327 1.12e-71 226
MsG0280007688.01.T01 MTR_0155s0040 39.130 322 175 9 11 331 14 315 1.40e-71 225
MsG0280007688.01.T01 MTR_2g008710 41.722 302 165 5 34 331 31 325 1.56e-71 226
MsG0280007688.01.T01 MTR_3g072190 44.402 259 135 2 73 331 2 251 4.45e-71 222
MsG0280007688.01.T01 MTR_4g095450 42.903 310 163 6 23 327 20 320 9.28e-71 224
MsG0280007688.01.T01 MTR_1g077000 39.735 302 169 7 30 331 39 327 2.30e-69 220
MsG0280007688.01.T01 MTR_1g025980 38.816 304 175 5 30 331 24 318 2.47e-69 220
MsG0280007688.01.T01 MTR_1g038680 38.079 302 181 4 34 331 33 332 4.42e-69 219
MsG0280007688.01.T01 MTR_4g127670 41.967 305 163 4 29 327 23 319 1.69e-68 218
MsG0280007688.01.T01 MTR_4g087965 39.672 305 177 5 29 328 41 343 2.62e-67 215
MsG0280007688.01.T01 MTR_6g043240 42.020 307 156 9 30 331 42 331 6.87e-67 214
MsG0280007688.01.T01 MTR_3g092990 37.500 328 188 4 6 332 5 316 3.53e-66 211
MsG0280007688.01.T01 MTR_1g090760 36.982 338 202 7 1 333 1 332 1.17e-65 211
MsG0280007688.01.T01 MTR_5g074860 38.509 322 148 4 12 330 11 285 2.42e-65 208
MsG0280007688.01.T01 MTR_8g062780 35.562 329 207 4 7 333 1 326 6.86e-65 209
MsG0280007688.01.T01 MTR_7g086870 38.284 303 175 7 30 332 22 312 7.28e-65 208
MsG0280007688.01.T01 MTR_1g009750 37.954 303 171 3 29 331 26 311 1.44e-63 204
MsG0280007688.01.T01 MTR_6g043460 40.000 300 167 6 30 327 36 324 1.54e-63 206
MsG0280007688.01.T01 MTR_3g105790 37.261 314 189 3 22 333 17 324 3.31e-61 199
MsG0280007688.01.T01 MTR_6g027440 38.835 309 180 6 23 331 15 314 4.28e-61 199
MsG0280007688.01.T01 MTR_2g008160 39.228 311 177 7 26 331 20 323 5.38e-61 198
MsG0280007688.01.T01 MTR_2g067440 35.328 351 187 7 16 330 40 386 8.22e-61 200
MsG0280007688.01.T01 MTR_5g033470 35.691 311 191 6 27 331 70 377 5.80e-60 197
MsG0280007688.01.T01 MTR_2g099175 34.012 344 201 10 1 331 5 335 3.56e-58 191
MsG0280007688.01.T01 MTR_2g077990 34.091 352 191 7 15 328 55 403 1.50e-57 192
MsG0280007688.01.T01 MTR_2g078610 34.091 352 191 7 15 328 55 403 3.16e-57 191
MsG0280007688.01.T01 MTR_0147s0010 35.385 325 172 5 27 330 74 381 3.23e-56 188
MsG0280007688.01.T01 MTR_0286s0010 34.839 310 193 6 26 331 30 334 1.43e-54 182
MsG0280007688.01.T01 MTR_6g008075 34.839 310 193 6 26 331 30 334 1.43e-54 182
MsG0280007688.01.T01 MTR_2g078280 33.824 340 184 7 15 316 55 391 5.19e-54 182
MsG0280007688.01.T01 MTR_2g067450 37.134 307 183 6 28 330 9 309 1.98e-53 178
MsG0280007688.01.T01 MTR_1g066710 33.876 307 192 5 28 331 25 323 1.44e-51 174
MsG0280007688.01.T01 MTR_1g066380 33.442 308 194 4 28 332 25 324 4.92e-50 170
MsG0280007688.01.T01 MTR_2g008730 35.762 302 159 5 34 331 31 301 1.05e-49 168
MsG0280007688.01.T01 MTR_1g066640 33.876 307 192 4 28 331 25 323 3.36e-49 168
MsG0280007688.01.T01 MTR_1g066680 33.876 307 191 5 28 331 25 322 2.06e-48 166
MsG0280007688.01.T01 MTR_4g132110 32.450 302 193 4 33 331 35 328 7.57e-48 164
MsG0280007688.01.T01 MTR_4g132110 32.573 307 191 6 33 331 35 333 2.18e-46 161
MsG0280007688.01.T01 MTR_2g008160 34.405 311 157 7 26 331 20 288 7.65e-46 158
MsG0280007688.01.T01 MTR_5g074700 38.889 234 118 5 103 333 5 216 3.55e-44 151
MsG0280007688.01.T01 MTR_3g105790 37.657 239 145 2 97 333 12 248 2.37e-43 150
MsG0280007688.01.T01 MTR_3g072210 40.314 191 105 3 142 331 56 238 8.49e-41 143
MsG0280007688.01.T01 MTR_2g008160 43.678 174 94 3 26 199 20 189 3.25e-40 140
MsG0280007688.01.T01 MTR_7g072490 38.153 249 91 4 76 324 2 187 4.69e-39 138
MsG0280007688.01.T01 MTR_1g066380 33.716 261 162 4 74 331 3 255 1.16e-38 138
MsG0280007688.01.T01 MTR_3g072260 54.545 110 50 0 29 138 25 134 5.93e-35 125
MsG0280007688.01.T01 MTR_2g029930 56.250 112 21 3 15 112 4 101 7.81e-31 113
MsG0280007688.01.T01 MTR_2g078560 29.646 226 126 5 136 330 96 319 3.71e-23 98.6
MsG0280007688.01.T01 MTR_7g086790 31.472 197 109 5 77 271 17 189 8.58e-22 92.0
MsG0280007688.01.T01 MTR_5g058120 36.196 163 91 3 165 327 6 155 1.61e-20 89.7
MsG0280007688.01.T01 MTR_3g462850 37.063 143 85 5 194 332 9 150 2.36e-19 84.0
MsG0280007688.01.T01 MTR_4g031040 38.525 122 58 2 142 263 27 131 2.55e-18 80.9
MsG0280007688.01.T01 MTR_1g089005 39.200 125 62 3 15 133 7 123 6.50e-18 80.1
MsG0280007688.01.T01 MTR_1g098320 46.250 80 41 1 252 331 47 124 1.23e-16 76.3
MsG0280007688.01.T01 MTR_4g012865 46.479 71 38 0 27 97 74 144 1.28e-16 76.6
MsG0280007688.01.T01 MTR_6g048160 50.685 73 32 2 69 141 22 90 1.34e-15 71.6
MsG0280007688.01.T01 MTR_4g114220 48.718 78 30 2 57 134 30 97 2.06e-15 72.8
MsG0280007688.01.T01 MTR_7g086810 31.405 121 57 1 28 148 4 98 6.97e-13 67.8
MsG0280007688.01.T01 MTR_5g074770 37.079 89 55 1 242 330 21 108 8.80e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007688.01.T01 AT5G06720 56.151 317 139 0 15 331 17 333 3.87e-124 360
MsG0280007688.01.T01 AT5G06730 53.709 337 152 1 15 347 18 354 2.82e-123 359
MsG0280007688.01.T01 AT2G38380 55.247 324 142 2 26 348 27 348 1.07e-121 355
MsG0280007688.01.T01 AT2G38390 53.704 324 147 2 26 348 27 348 3.02e-118 346
MsG0280007688.01.T01 AT3G49120 53.374 326 150 2 26 349 28 353 9.50e-115 337
MsG0280007688.01.T01 AT3G32980 53.067 326 151 2 26 349 27 352 2.84e-113 333
MsG0280007688.01.T01 AT3G49110 53.067 326 151 2 26 349 29 354 5.62e-112 330
MsG0280007688.01.T01 AT4G08770 51.411 319 153 2 26 342 20 338 2.70e-110 325
MsG0280007688.01.T01 AT4G08780 50.613 326 159 2 26 349 20 345 3.96e-110 325
MsG0280007688.01.T01 AT5G66390 46.108 334 176 2 1 331 1 333 8.90e-104 308
MsG0280007688.01.T01 AT5G19890 51.307 306 141 4 28 331 28 327 4.50e-100 299
MsG0280007688.01.T01 AT1G44970 47.649 319 159 1 21 331 28 346 2.57e-99 297
MsG0280007688.01.T01 AT5G19880 49.045 314 155 4 22 331 17 329 1.11e-97 293
MsG0280007688.01.T01 AT4G36430 47.078 308 162 1 25 332 25 331 1.53e-97 292
MsG0280007688.01.T01 AT3G50990 48.534 307 157 1 25 331 36 341 2.24e-97 292
MsG0280007688.01.T01 AT2G18150 44.343 327 181 1 5 331 11 336 6.81e-95 286
MsG0280007688.01.T01 AT2G18140 47.020 302 159 1 30 331 35 335 8.57e-95 286
MsG0280007688.01.T01 AT1G68850 47.231 307 152 6 33 332 33 336 3.67e-94 284
MsG0280007688.01.T01 AT5G05340 47.712 306 149 3 28 331 28 324 1.44e-93 282
MsG0280007688.01.T01 AT1G14550 47.712 306 152 3 27 331 23 321 3.15e-93 281
MsG0280007688.01.T01 AT1G49570 45.902 305 160 3 28 329 46 348 2.13e-90 275
MsG0280007688.01.T01 AT1G14540 43.692 325 166 3 7 331 8 315 3.87e-89 270
MsG0280007688.01.T01 AT4G16270 44.702 302 164 2 30 331 50 348 4.04e-89 271
MsG0280007688.01.T01 AT1G71695 46.452 310 156 5 30 337 44 345 3.29e-85 262
MsG0280007688.01.T01 AT2G22420 41.104 326 180 4 6 331 6 319 3.05e-84 258
MsG0280007688.01.T01 AT2G35380 45.912 318 164 4 18 331 22 335 5.00e-82 253
MsG0280007688.01.T01 AT3G21770 43.492 315 174 4 19 332 18 329 6.73e-81 250
MsG0280007688.01.T01 AT5G58390 44.194 310 159 5 26 331 17 316 6.95e-81 249
MsG0280007688.01.T01 AT3G03670 39.628 323 191 3 9 331 3 321 5.63e-80 247
MsG0280007688.01.T01 AT2G18980 42.638 326 176 4 10 331 5 323 2.32e-79 246
MsG0280007688.01.T01 AT5G58400 43.438 320 164 6 16 331 19 325 2.83e-79 246
MsG0280007688.01.T01 AT5G14130 43.082 318 172 5 19 331 17 330 5.55e-79 245
MsG0280007688.01.T01 AT1G05260 42.671 307 170 5 28 332 24 326 8.80e-79 244
MsG0280007688.01.T01 AT4G11290 42.105 323 182 4 11 331 7 326 9.81e-79 244
MsG0280007688.01.T01 AT5G14130 43.082 318 172 5 19 331 58 371 1.26e-78 245
MsG0280007688.01.T01 AT4G37530 43.366 309 170 3 26 331 23 329 2.19e-78 243
MsG0280007688.01.T01 AT5G17820 39.441 322 182 6 10 331 5 313 8.93e-78 241
MsG0280007688.01.T01 AT5G51890 41.667 336 177 10 1 331 1 322 1.87e-77 241
MsG0280007688.01.T01 AT5G67400 41.867 332 181 5 9 331 1 329 3.42e-77 240
MsG0280007688.01.T01 AT4G30170 43.042 309 165 5 27 331 24 325 4.23e-77 240
MsG0280007688.01.T01 AT5G17820 39.441 322 182 6 10 331 58 366 1.11e-76 240
MsG0280007688.01.T01 AT3G01190 40.663 332 185 8 1 331 1 321 1.48e-76 238
MsG0280007688.01.T01 AT5G64120 40.419 334 182 7 4 331 6 328 6.48e-76 237
MsG0280007688.01.T01 AT5G15180 40.060 332 190 6 1 331 6 329 1.15e-75 236
MsG0280007688.01.T01 AT4G37520 41.694 307 174 3 28 331 25 329 2.49e-74 233
MsG0280007688.01.T01 AT3G49960 40.122 329 187 5 7 331 7 329 5.30e-74 232
MsG0280007688.01.T01 AT2G41480 41.796 323 172 7 15 331 16 328 2.36e-73 230
MsG0280007688.01.T01 AT4G37520 41.368 307 172 4 28 331 25 326 7.59e-73 229
MsG0280007688.01.T01 AT4G26010 40.260 308 168 7 25 331 17 309 2.07e-70 222
MsG0280007688.01.T01 AT4G26010 40.260 308 168 7 25 331 45 337 3.94e-70 223
MsG0280007688.01.T01 AT5G39580 39.818 329 182 7 4 331 6 319 4.35e-70 222
MsG0280007688.01.T01 AT1G05240 39.355 310 170 6 30 331 26 325 1.67e-68 218
MsG0280007688.01.T01 AT1G05250 39.355 310 170 6 30 331 26 325 1.67e-68 218
MsG0280007688.01.T01 AT4G25980 39.264 326 183 6 11 331 11 326 2.56e-68 218
MsG0280007688.01.T01 AT5G42180 37.855 317 187 7 15 330 9 316 1.49e-67 215
MsG0280007688.01.T01 AT4G37530 44.358 257 140 2 26 279 23 279 2.65e-67 213
MsG0280007688.01.T01 AT2G39040 39.744 312 177 6 27 331 43 350 2.72e-66 213
MsG0280007688.01.T01 AT4G33420 38.080 323 186 8 9 331 17 325 2.77e-66 212
MsG0280007688.01.T01 AT4G17690 38.511 309 179 5 30 335 26 326 7.05e-66 211
MsG0280007688.01.T01 AT5G64110 41.060 302 165 6 34 331 38 330 9.49e-66 211
MsG0280007688.01.T01 AT4G33420 38.080 323 186 8 9 331 64 372 1.22e-65 212
MsG0280007688.01.T01 AT4G33870 34.320 338 182 5 27 328 65 398 1.36e-64 210
MsG0280007688.01.T01 AT4G31760 35.821 335 202 5 1 331 1 326 9.79e-64 206
MsG0280007688.01.T01 AT2G34060 38.436 307 182 5 27 328 39 343 1.05e-63 206
MsG0280007688.01.T01 AT2G24800 38.436 307 180 4 28 331 29 329 1.10e-63 206
MsG0280007688.01.T01 AT5G64100 38.742 302 172 6 33 331 40 331 1.02e-62 203
MsG0280007688.01.T01 AT1G30870 37.294 303 177 6 33 332 54 346 1.77e-62 203
MsG0280007688.01.T01 AT2G43480 34.694 343 198 9 7 331 1 335 9.15e-61 198
MsG0280007688.01.T01 AT1G34510 36.721 305 177 6 28 331 20 309 1.08e-60 197
MsG0280007688.01.T01 AT1G77100 39.048 315 168 7 26 331 20 319 1.13e-60 197
MsG0280007688.01.T01 AT5G22410 35.127 316 191 8 17 327 15 321 1.99e-60 197
MsG0280007688.01.T01 AT5G47000 35.370 311 191 5 28 335 31 334 5.50e-59 194
MsG0280007688.01.T01 AT5G40150 35.484 310 191 4 24 331 26 328 8.49e-59 193
MsG0280007688.01.T01 AT2G35380 45.344 247 131 3 89 331 1 247 1.01e-58 190
MsG0280007688.01.T01 AT3G28200 35.691 311 186 6 25 331 16 316 2.76e-58 191
MsG0280007688.01.T01 AT1G24110 36.000 325 197 8 11 331 5 322 1.03e-56 187
MsG0280007688.01.T01 AT5G24070 33.531 337 199 9 7 331 12 335 5.91e-56 186
MsG0280007688.01.T01 AT3G17070 35.799 338 197 9 3 331 13 339 4.61e-54 181
MsG0280007688.01.T01 AT2G37130 34.951 309 189 6 27 331 27 327 4.88e-52 175
MsG0280007688.01.T01 AT2G37130 34.983 303 185 6 33 331 2 296 7.85e-51 171
MsG0280007688.01.T01 AT4G21960 32.895 304 189 5 33 331 34 327 3.45e-49 168
MsG0280007688.01.T01 AT4G25980 44.385 187 96 4 11 197 56 234 6.43e-43 150
MsG0280007688.01.T01 AT5G39580 40.000 205 111 4 4 208 6 198 1.57e-38 137
MsG0280007688.01.T01 AT3G17070 36.059 269 153 9 72 331 18 276 1.10e-37 136
MsG0280007688.01.T01 AT2G24800 38.690 168 99 1 28 195 29 192 2.82e-34 126
MsG0280007688.01.T01 AT3G42570 36.082 97 61 1 102 197 53 149 2.71e-11 61.6

Find 76 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGATCTTGTTGCACTTTC+AGG 0.109767 2:-19231485 MsG0280007688.01.T01:intron
TAAGGCCTCTATGATTAAAA+TGG 0.131743 2:-19230716 MsG0280007688.01.T01:CDS
CCCTAGAAAACACTCTTTAT+TGG 0.184227 2:+19230537 None:intergenic
ATGATTAAAATGGGTAATAT+TGG 0.284100 2:-19230706 MsG0280007688.01.T01:CDS
CGCTTGTGGAAAACAATTCT+TGG 0.287458 2:+19230803 None:intergenic
CACAACATCCAAACCTCTTA+TGG 0.297023 2:+19232587 None:intergenic
TGCTAATATTTCCACAGTTC+TGG 0.297066 2:-19232493 MsG0280007688.01.T01:intron
TAATAGCACACTCACCAATT+TGG 0.298613 2:-19230902 MsG0280007688.01.T01:CDS
AAACTATCTCTTCTTCCTAA+TGG 0.298706 2:+19231605 None:intergenic
CCTAGAAAACACTCTTTATT+GGG 0.339570 2:+19230538 None:intergenic
TGCAGGCTCTTGGTCCTGAT+TGG 0.348768 2:-19231634 MsG0280007688.01.T01:intron
TTAGCTGAGTAAGATCAAAT+TGG 0.354643 2:+19231540 None:intergenic
AAGCTTCAAAGAAAAGAGTT+TGG 0.356755 2:+19230740 None:intergenic
GCAGGCTCTTGGTCCTGATT+GGG 0.385775 2:-19231633 MsG0280007688.01.T01:intron
CTTGCTAATTCAAACCTTCC+TGG 0.385977 2:-19231566 MsG0280007688.01.T01:CDS
AAAGTGAAGCCTAATAAAAC+TGG 0.387546 2:+19232970 None:intergenic
TAGCTGAGTAAGATCAAATT+GGG 0.393030 2:+19231541 None:intergenic
TAGCTCGAGTCGAATGTATC+TGG 0.415232 2:+19230868 None:intergenic
TGACATAATTTGCAGGCTCT+TGG 0.415627 2:-19231644 MsG0280007688.01.T01:intron
TGCTGTGTAGTGGTTGTGCT+TGG 0.416566 2:-19233118 MsG0280007688.01.T01:CDS
AAGACAAGTTTGCATGAGAA+AGG 0.424864 2:-19230567 MsG0280007688.01.T01:three_prime_UTR
TTGACAATGGAAGTGACATT+TGG 0.425363 2:+19233037 None:intergenic
CCTGATTGGGAAGTTCCATT+AGG 0.430222 2:-19231620 MsG0280007688.01.T01:CDS
AGAACAATATGTCCCATTGA+TGG 0.430802 2:-19230928 MsG0280007688.01.T01:CDS
TGTTCTCAATGTTTGTAAGT+AGG 0.437059 2:+19230945 None:intergenic
ACCATCTTCCTTGGTGACTT+TGG 0.437925 2:+19230615 None:intergenic
TGGAGTGGTTGGGTCCAAAT+TGG 0.439167 2:+19230888 None:intergenic
CTCAAACCTAAGGATTCAAA+AGG 0.440527 2:-19230842 MsG0280007688.01.T01:CDS
AAGGCCTCTATGATTAAAAT+GGG 0.441216 2:-19230715 MsG0280007688.01.T01:CDS
CCTAATGGAACTTCCCAATC+AGG 0.449764 2:+19231620 None:intergenic
TACAAGAAATGAAAGATACT+TGG 0.452421 2:+19230382 None:intergenic
TCGAATGTATCTGGAGTGGT+TGG 0.452877 2:+19230877 None:intergenic
CAAGTGTCCTTGTAGAAGTT+AGG 0.456671 2:+19233061 None:intergenic
ATATTAGGTGCTCATACAAT+TGG 0.461419 2:-19231048 MsG0280007688.01.T01:intron
ACATACATGTGCTCTTGTGC+TGG 0.468347 2:-19230513 MsG0280007688.01.T01:three_prime_UTR
TGTGTAGTGGTTGTGCTTGG+AGG 0.472368 2:-19233115 MsG0280007688.01.T01:CDS
AAGTAGGTTGTGTTAAGAGT+TGG 0.473975 2:+19230961 None:intergenic
CCTTGGTGACTTTGGTAGCA+AGG 0.480830 2:+19230623 None:intergenic
AAATTGGTGAGTGTGCTATT+AGG 0.482129 2:+19230904 None:intergenic
GTGTAGTGGTTGTGCTTGGA+GGG 0.502187 2:-19233114 MsG0280007688.01.T01:CDS
GGTTGTGTTAAGAGTTGGAT+CGG 0.505458 2:+19230966 None:intergenic
TGTGCGGATATTCTTGCACT+TGG 0.517442 2:-19232516 MsG0280007688.01.T01:CDS
GATACTATCGTGAGCGAGCA+AGG 0.535008 2:-19232630 MsG0280007688.01.T01:CDS
GTTGAGACCTTGTTTAGCAA+AGG 0.535900 2:+19231511 None:intergenic
CGAATGTATCTGGAGTGGTT+GGG 0.542591 2:+19230878 None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG 0.543829 2:+19230967 None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG 0.544272 2:+19233087 None:intergenic
ACCAAAGTCACCAAGGAAGA+TGG 0.548166 2:-19230616 MsG0280007688.01.T01:CDS
AGTTGTGCATTTGAAGAGAA+GGG 0.549134 2:+19233088 None:intergenic
GGCAGCTTTGTGCTGTGTAG+TGG 0.549901 2:-19233128 MsG0280007688.01.T01:CDS
AGTGGTGTTTGCGCCGCTTG+TGG 0.552455 2:+19230789 None:intergenic
CGAGCTACTACTCAAACCTA+AGG 0.553925 2:-19230852 MsG0280007688.01.T01:CDS
GTGCTATTAGGTCCATCAAT+GGG 0.561855 2:+19230916 None:intergenic
GCTAACAGTACCATCTTCCT+TGG 0.566259 2:+19230606 None:intergenic
GAGACCTTGTTTAGCAAAGG+AGG 0.569485 2:+19231514 None:intergenic
TGCTAAGACTTGTTTGACAA+TGG 0.574005 2:+19233024 None:intergenic
TGTGCTATTAGGTCCATCAA+TGG 0.576345 2:+19230915 None:intergenic
GTAAGATCAAATTGGGGACC+AGG 0.580024 2:+19231548 None:intergenic
TCGTGAGCGAGCAAGGAGCT+AGG 0.582411 2:-19232623 MsG0280007688.01.T01:CDS
GGTGCTCATACAATTGGTAG+AGG 0.588048 2:-19231042 MsG0280007688.01.T01:CDS
TCAAACCTAAGGATTCAAAA+GGG 0.596776 2:-19230841 MsG0280007688.01.T01:CDS
ATATCCTCCTTTGCTAAACA+AGG 0.599718 2:-19231518 MsG0280007688.01.T01:CDS
TCCTAGTGTTGTGTCTTGTG+CGG 0.602765 2:-19232532 MsG0280007688.01.T01:CDS
ATAAAACTGGCAAGCATACG+AGG 0.610851 2:+19232983 None:intergenic
ACTTGATCCTAACTTCTACA+AGG 0.616898 2:-19233068 MsG0280007688.01.T01:CDS
GATCAAATTGGGGACCAGGA+AGG 0.621129 2:+19231552 None:intergenic
GAAACTATTGACAATGGCAG+TGG 0.640788 2:+19230771 None:intergenic
GTTGTTGAAACTATTGACAA+TGG 0.651873 2:+19230765 None:intergenic
CGAGTCGAATGTATCTGGAG+TGG 0.656528 2:+19230873 None:intergenic
TGTGGAACATACCAGAACTG+TGG 0.673152 2:+19232482 None:intergenic
GGAGTGTTAAATGAAACTCA+AGG 0.673821 2:-19230685 MsG0280007688.01.T01:CDS
GAATCAAATCAAAGACGCAG+TGG 0.676892 2:-19232565 MsG0280007688.01.T01:CDS
ACAATTGGTAGAGGTCAATG+TGG 0.678112 2:-19231033 MsG0280007688.01.T01:CDS
TCCGCACAAGACACAACACT+AGG 0.691012 2:+19232531 None:intergenic
CCTTGCTACCAAAGTCACCA+AGG 0.693533 2:-19230623 MsG0280007688.01.T01:CDS
AGCTGAGTAAGATCAAATTG+GGG 0.702266 2:+19231542 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTATTAATTTTTATTT+TGG - Chr2:19232247-19232266 MsG0280007688.01.T01:intron 0.0%
!! AAAAAAAAAAGTTTATTACA+AGG + Chr2:19231704-19231723 None:intergenic 10.0%
!! TAAGAAGAAATTTAATTATA+AGG + Chr2:19231277-19231296 None:intergenic 10.0%
!!! GTATGTTTTTAAAAAATATT+AGG - Chr2:19232424-19232443 MsG0280007688.01.T01:intron 10.0%
!!! TATTAATATTTTGTAATCTA+TGG - Chr2:19233006-19233025 MsG0280007688.01.T01:CDS 10.0%
!!! TTTTGTTATAATTTTAGTTT+TGG - Chr2:19231540-19231559 MsG0280007688.01.T01:CDS 10.0%
!! ATATATGTTATATCTATGTA+AGG - Chr2:19230802-19230821 MsG0280007688.01.T01:CDS 15.0%
!! TATATGTTATATCTATGTAA+GGG - Chr2:19230803-19230822 MsG0280007688.01.T01:CDS 15.0%
!! TCTAAAAACATTACTAAATT+TGG - Chr2:19230766-19230785 MsG0280007688.01.T01:CDS 15.0%
!! TTAAAAAATTAACAGAAACA+TGG + Chr2:19231242-19231261 None:intergenic 15.0%
!!! AAGTTGATCTTTTTATATTT+AGG + Chr2:19231491-19231510 None:intergenic 15.0%
!!! GTTTTTATAACTATTATACT+AGG - Chr2:19231779-19231798 MsG0280007688.01.T01:intron 15.0%
!! AAATATATTACTCTTCGTAT+TGG + Chr2:19230730-19230749 None:intergenic 20.0%
!! AATATAAAGAGTAGACTAAA+AGG - Chr2:19231639-19231658 MsG0280007688.01.T01:intron 20.0%
!! ATGATTAAAATGGGTAATAT+TGG - Chr2:19232781-19232800 MsG0280007688.01.T01:intron 20.0%
!! CATAGTACTAAAAAATGTAT+AGG - Chr2:19231434-19231453 MsG0280007688.01.T01:intron 20.0%
!! TATTACAAGGAATTAAAGAA+AGG + Chr2:19231691-19231710 None:intergenic 20.0%
!! TTAAGACTAAAATCAACAAT+AGG + Chr2:19231621-19231640 None:intergenic 20.0%
!! TTGGTGCATATTTAAATTTA+TGG + Chr2:19230711-19230730 None:intergenic 20.0%
!! TTTAGATTTGTAGTATATGA+TGG + Chr2:19231164-19231183 None:intergenic 20.0%
!!! AAGATCTATTTTGTAATCTA+TGG - Chr2:19233051-19233070 MsG0280007688.01.T01:CDS 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG - Chr2:19232165-19232184 MsG0280007688.01.T01:intron 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG + Chr2:19232184-19232165 None:intergenic 20.0%
!!! ATTAAAGAAAGGCATTTTTT+AGG + Chr2:19231680-19231699 None:intergenic 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG - Chr2:19232166-19232185 MsG0280007688.01.T01:intron 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG + Chr2:19232185-19232166 None:intergenic 20.0%
!!! CTATACATTTTTTAGTACTA+TGG + Chr2:19231436-19231455 None:intergenic 20.0%
!!! TAAACTTTTAACAAAATCAC+AGG + Chr2:19230645-19230664 None:intergenic 20.0%
! AGTAATAATAATAAGTCGTG+AGG + Chr2:19231727-19231746 None:intergenic 25.0%
! CCCAAAATATAAGCAAAAAT+TGG - Chr2:19232084-19232103 MsG0280007688.01.T01:intron 25.0%
! CCCAAAATATAAGCAAAAAT+TGG + Chr2:19232103-19232084 None:intergenic 25.0%
! TACAAGAAATGAAAGATACT+TGG + Chr2:19233108-19233127 None:intergenic 25.0%
! TCAACAAAAGTTAATGTATC+TGG - Chr2:19232107-19232126 MsG0280007688.01.T01:intron 25.0%
! TCAACGAAAGTTAATGTATT+TGG + Chr2:19232146-19232165 None:intergenic 25.0%
!! ACAATAGGAAGAAATTTTGT+AGG + Chr2:19231606-19231625 None:intergenic 25.0%
!! ACTTTAATAGTCTTACCATT+AGG - Chr2:19231123-19231142 MsG0280007688.01.T01:intron 25.0%
!! TATATTTCTACATATGTGTG+CGG - Chr2:19232203-19232222 MsG0280007688.01.T01:intron 25.0%
!!! ATTACCCATTTTAATCATAG+AGG + Chr2:19232779-19232798 None:intergenic 25.0%
!!! TCTTTTCTTTGAAGCTTTTA+AGG - Chr2:19232753-19232772 MsG0280007688.01.T01:intron 25.0%
!!! TTTTTGCTTATATTTTGGGA+CGG + Chr2:19232189-19232170 None:intergenic 25.0%
AAACTATCTCTTCTTCCTAA+TGG + Chr2:19231885-19231904 None:intergenic 30.0%
AAAGTGAAGCCTAATAAAAC+TGG + Chr2:19230520-19230539 None:intergenic 30.0%
AAGCTTCAAAGAAAAGAGTT+TGG + Chr2:19232750-19232769 None:intergenic 30.0%
AAGGCCTCTATGATTAAAAT+GGG - Chr2:19232772-19232791 MsG0280007688.01.T01:intron 30.0%
AATTTACAACTGTCTCTAAC+GGG - Chr2:19232316-19232335 MsG0280007688.01.T01:intron 30.0%
ATATTAGGTGCTCATACAAT+TGG - Chr2:19232439-19232458 MsG0280007688.01.T01:intron 30.0%
CAATTTACAACTGTCTCTAA+CGG - Chr2:19232315-19232334 MsG0280007688.01.T01:intron 30.0%
CCAAATAAAAACTCCATAAG+AGG - Chr2:19230887-19230906 MsG0280007688.01.T01:CDS 30.0%
CCACATATACATACATAATG+AGG + Chr2:19232393-19232412 None:intergenic 30.0%
CCTAGAAAACACTCTTTATT+GGG + Chr2:19232952-19232971 None:intergenic 30.0%
CCTCATTATGTATGTATATG+TGG - Chr2:19232390-19232409 MsG0280007688.01.T01:intron 30.0%
GGATTTAATTGTGTCAATTG+AGG - Chr2:19232337-19232356 MsG0280007688.01.T01:intron 30.0%
GTTGTTGAAACTATTGACAA+TGG + Chr2:19232725-19232744 None:intergenic 30.0%
TAAAAACTCCATAAGAGGTT+TGG - Chr2:19230892-19230911 MsG0280007688.01.T01:CDS 30.0%
TAAGGCCTCTATGATTAAAA+TGG - Chr2:19232771-19232790 MsG0280007688.01.T01:intron 30.0%
TAGCTGAGTAAGATCAAATT+GGG + Chr2:19231949-19231968 None:intergenic 30.0%
TCAAACCTAAGGATTCAAAA+GGG - Chr2:19232646-19232665 MsG0280007688.01.T01:CDS 30.0%
TGATTCTATCAAACTCATTG+TGG + Chr2:19230615-19230634 None:intergenic 30.0%
TGTTCTCAATGTTTGTAAGT+AGG + Chr2:19232545-19232564 None:intergenic 30.0%
TTAGCTGAGTAAGATCAAAT+TGG + Chr2:19231950-19231969 None:intergenic 30.0%
TTTCTCTGATGTCATCAAAA+AGG + Chr2:19231215-19231234 None:intergenic 30.0%
! CCTCTTATGGAGTTTTTATT+TGG + Chr2:19230890-19230909 None:intergenic 30.0%
! CTCTTCTTTTCATCTCATAT+TGG - Chr2:19230338-19230357 MsG0280007688.01.T01:three_prime_UTR 30.0%
!! ACTTTCAAGTTACTTACAGA+TGG + Chr2:19231463-19231482 None:intergenic 30.0%
!!! CCAATAAAGAGTGTTTTCTA+GGG - Chr2:19232950-19232969 MsG0280007688.01.T01:intron 30.0%
AAGACAAGTTTGCATGAGAA+AGG - Chr2:19232920-19232939 MsG0280007688.01.T01:intron 35.0%
AAGTAGGTTGTGTTAAGAGT+TGG + Chr2:19232529-19232548 None:intergenic 35.0%
AAGTTGTGCATTTGAAGAGA+AGG + Chr2:19230403-19230422 None:intergenic 35.0%
ACTTGATCCTAACTTCTACA+AGG - Chr2:19230419-19230438 MsG0280007688.01.T01:three_prime_UTR 35.0%
AGAACAATATGTCCCATTGA+TGG - Chr2:19232559-19232578 MsG0280007688.01.T01:CDS 35.0%
AGCTGAGTAAGATCAAATTG+GGG + Chr2:19231948-19231967 None:intergenic 35.0%
AGTTGTGCATTTGAAGAGAA+GGG + Chr2:19230402-19230421 None:intergenic 35.0%
ATATCCTCCTTTGCTAAACA+AGG - Chr2:19231969-19231988 MsG0280007688.01.T01:intron 35.0%
CCCTAGAAAACACTCTTTAT+TGG + Chr2:19232953-19232972 None:intergenic 35.0%
CTCAAACCTAAGGATTCAAA+AGG - Chr2:19232645-19232664 MsG0280007688.01.T01:CDS 35.0%
TAAGTCTCAGTTAGAAGATG+TGG + Chr2:19231026-19231045 None:intergenic 35.0%
TAATAGCACACTCACCAATT+TGG - Chr2:19232585-19232604 MsG0280007688.01.T01:CDS 35.0%
TGCTAATATTTCCACAGTTC+TGG - Chr2:19230994-19231013 MsG0280007688.01.T01:CDS 35.0%
TTATGTCACCAGGAAATATG+AGG + Chr2:19231831-19231850 None:intergenic 35.0%
TTGACAATGGAAGTGACATT+TGG + Chr2:19230453-19230472 None:intergenic 35.0%
! AAATTGGTGAGTGTGCTATT+AGG + Chr2:19232586-19232605 None:intergenic 35.0%
! AGTATATGATGGAATGAGCA+GGG + Chr2:19231153-19231172 None:intergenic 35.0%
! CAAGAATTGTTTTCCACAAG+CGG - Chr2:19232685-19232704 MsG0280007688.01.T01:intron 35.0%
! GCGTACAACTATAGCTTTTT+AGG + Chr2:19232042-19232061 None:intergenic 35.0%
! GGAGTGTTAAATGAAACTCA+AGG - Chr2:19232802-19232821 MsG0280007688.01.T01:intron 35.0%
! TAGTATATGATGGAATGAGC+AGG + Chr2:19231154-19231173 None:intergenic 35.0%
! TGCTAAGACTTGTTTGACAA+TGG + Chr2:19230466-19230485 None:intergenic 35.0%
!!! CCCAATAAAGAGTGTTTTCT+AGG - Chr2:19232949-19232968 MsG0280007688.01.T01:intron 35.0%
!!! GTATGCTTGCCAGTTTTATT+AGG - Chr2:19230508-19230527 MsG0280007688.01.T01:three_prime_UTR 35.0%
!!! TGCTTATATTTTGGGACAGA+GGG - Chr2:19232174-19232193 MsG0280007688.01.T01:intron 35.0%
!!! TTGCTTATATTTTGGGACAG+AGG - Chr2:19232173-19232192 MsG0280007688.01.T01:intron 35.0%
ACAATTGGTAGAGGTCAATG+TGG - Chr2:19232454-19232473 MsG0280007688.01.T01:intron 40.0%
ACTGATCTTGTTGCACTTTC+AGG - Chr2:19232002-19232021 MsG0280007688.01.T01:intron 40.0%
AGTAAAGAAAGCCTCTTAGC+CGG - Chr2:19231388-19231407 MsG0280007688.01.T01:intron 40.0%
ATAAAACTGGCAAGCATACG+AGG + Chr2:19230507-19230526 None:intergenic 40.0%
CAAGTGTCCTTGTAGAAGTT+AGG + Chr2:19230429-19230448 None:intergenic 40.0%
CACAACATCCAAACCTCTTA+TGG + Chr2:19230903-19230922 None:intergenic 40.0%
CGCTTGTGGAAAACAATTCT+TGG + Chr2:19232687-19232706 None:intergenic 40.0%
CTTGCTAATTCAAACCTTCC+TGG - Chr2:19231921-19231940 MsG0280007688.01.T01:intron 40.0%
GAAACTATTGACAATGGCAG+TGG + Chr2:19232719-19232738 None:intergenic 40.0%
GAATCAAATCAAAGACGCAG+TGG - Chr2:19230922-19230941 MsG0280007688.01.T01:CDS 40.0%
GAGAAACCTAGCATCAAAGA+TGG + Chr2:19231414-19231433 None:intergenic 40.0%
GGTTGTGTTAAGAGTTGGAT+CGG + Chr2:19232524-19232543 None:intergenic 40.0%
GTTGTGTTAAGAGTTGGATC+GGG + Chr2:19232523-19232542 None:intergenic 40.0%
TACTTGTGCCTCATATTTCC+TGG - Chr2:19231820-19231839 MsG0280007688.01.T01:intron 40.0%
! ACAAGCCCTTTTGAATCCTT+AGG + Chr2:19232654-19232673 None:intergenic 40.0%
! GTGCTATTAGGTCCATCAAT+GGG + Chr2:19232574-19232593 None:intergenic 40.0%
! GTTGAGACCTTGTTTAGCAA+AGG + Chr2:19231979-19231998 None:intergenic 40.0%
! TGACATAATTTGCAGGCTCT+TGG - Chr2:19231843-19231862 MsG0280007688.01.T01:intron 40.0%
! TGTGCTATTAGGTCCATCAA+TGG + Chr2:19232575-19232594 None:intergenic 40.0%
! TTCCTGGTGACATAATTTGC+AGG - Chr2:19231836-19231855 MsG0280007688.01.T01:intron 40.0%
!!! TGCTTATATTTTGGGACGGA+GGG + Chr2:19232079-19232098 None:intergenic 40.0%
!!! TTGCTTATATTTTGGGACGG+AGG + Chr2:19232080-19232099 None:intergenic 40.0%
AACCTAGCATCAAAGATGGC+CGG + Chr2:19231410-19231429 None:intergenic 45.0%
AATGAGCAGGGTCAACCTAA+TGG + Chr2:19231141-19231160 None:intergenic 45.0%
ACATACATGTGCTCTTGTGC+TGG - Chr2:19232974-19232993 MsG0280007688.01.T01:CDS 45.0%
ACCAAAGTCACCAAGGAAGA+TGG - Chr2:19232871-19232890 MsG0280007688.01.T01:intron 45.0%
AGCCTGCAAATTATGTCACC+AGG + Chr2:19231841-19231860 None:intergenic 45.0%
CAAACTTGCCAGCTCATTCA+AGG - Chr2:19231314-19231333 MsG0280007688.01.T01:intron 45.0%
CCTAATGGAACTTCCCAATC+AGG + Chr2:19231870-19231889 None:intergenic 45.0%
CCTGATTGGGAAGTTCCATT+AGG - Chr2:19231867-19231886 MsG0280007688.01.T01:intron 45.0%
CGAGCTACTACTCAAACCTA+AGG - Chr2:19232635-19232654 MsG0280007688.01.T01:CDS 45.0%
CTTGAATGAGCTGGCAAGTT+TGG + Chr2:19231316-19231335 None:intergenic 45.0%
GCTAACAGTACCATCTTCCT+TGG + Chr2:19232884-19232903 None:intergenic 45.0%
GGTGCTCATACAATTGGTAG+AGG - Chr2:19232445-19232464 MsG0280007688.01.T01:intron 45.0%
GTAAGATCAAATTGGGGACC+AGG + Chr2:19231942-19231961 None:intergenic 45.0%
TAGCTCGAGTCGAATGTATC+TGG + Chr2:19232622-19232641 None:intergenic 45.0%
TCCTAGTGTTGTGTCTTGTG+CGG - Chr2:19230955-19230974 MsG0280007688.01.T01:CDS 45.0%
TGTGCGGATATTCTTGCACT+TGG - Chr2:19230971-19230990 MsG0280007688.01.T01:CDS 45.0%
TGTGGAACATACCAGAACTG+TGG + Chr2:19231008-19231027 None:intergenic 45.0%
TTTCTCGTCCTTGAATGAGC+TGG + Chr2:19231325-19231344 None:intergenic 45.0%
! ACCATCTTCCTTGGTGACTT+TGG + Chr2:19232875-19232894 None:intergenic 45.0%
! CGAATGTATCTGGAGTGGTT+GGG + Chr2:19232612-19232631 None:intergenic 45.0%
! GAGACCTTGTTTAGCAAAGG+AGG + Chr2:19231976-19231995 None:intergenic 45.0%
! TCGAATGTATCTGGAGTGGT+TGG + Chr2:19232613-19232632 None:intergenic 45.0%
!! ATTATTATTATTAATTAAAG+TGG - Chr2:19232279-19232298 MsG0280007688.01.T01:intron 5.0%
!!! TCTTTTTATATTATTTTTTT+TGG + Chr2:19231516-19231535 None:intergenic 5.0%
ATCAAAGATGGCCGGCTAAG+AGG + Chr2:19231402-19231421 None:intergenic 50.0%
CCTTGCTACCAAAGTCACCA+AGG - Chr2:19232864-19232883 MsG0280007688.01.T01:intron 50.0%
CGAGTCGAATGTATCTGGAG+TGG + Chr2:19232617-19232636 None:intergenic 50.0%
GATACTATCGTGAGCGAGCA+AGG - Chr2:19230857-19230876 MsG0280007688.01.T01:CDS 50.0%
GATCAAATTGGGGACCAGGA+AGG + Chr2:19231938-19231957 None:intergenic 50.0%
GTGTAGTGGTTGTGCTTGGA+GGG - Chr2:19230373-19230392 MsG0280007688.01.T01:three_prime_UTR 50.0%
TCCGCACAAGACACAACACT+AGG + Chr2:19230959-19230978 None:intergenic 50.0%
TGCTGTGTAGTGGTTGTGCT+TGG - Chr2:19230369-19230388 MsG0280007688.01.T01:three_prime_UTR 50.0%
TGGAGTGGTTGGGTCCAAAT+TGG + Chr2:19232602-19232621 None:intergenic 50.0%
TGTGTAGTGGTTGTGCTTGG+AGG - Chr2:19230372-19230391 MsG0280007688.01.T01:three_prime_UTR 50.0%
! CCTTGGTGACTTTGGTAGCA+AGG + Chr2:19232867-19232886 None:intergenic 50.0%
AGCCGGCCATCTTTGATGCT+AGG - Chr2:19231405-19231424 MsG0280007688.01.T01:intron 55.0%
GCAGGCTCTTGGTCCTGATT+GGG - Chr2:19231854-19231873 MsG0280007688.01.T01:intron 55.0%
TGCAGGCTCTTGGTCCTGAT+TGG - Chr2:19231853-19231872 MsG0280007688.01.T01:intron 55.0%
! GGCAGCTTTGTGCTGTGTAG+TGG - Chr2:19230359-19230378 MsG0280007688.01.T01:three_prime_UTR 55.0%
AGTGGTGTTTGCGCCGCTTG+TGG + Chr2:19232701-19232720 None:intergenic 60.0%
TCGTGAGCGAGCAAGGAGCT+AGG - Chr2:19230864-19230883 MsG0280007688.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 19230333 19233176 19230333 ID=MsG0280007688.01;Name=MsG0280007688.01
Chr2 mRNA 19230333 19233176 19230333 ID=MsG0280007688.01.T01;Parent=MsG0280007688.01;Name=MsG0280007688.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.66|0.5|1|1|1|4|264|349
Chr2 exon 19230333 19231063 19230333 ID=MsG0280007688.01.T01:exon:10152;Parent=MsG0280007688.01.T01
Chr2 exon 19231486 19231651 19231486 ID=MsG0280007688.01.T01:exon:10151;Parent=MsG0280007688.01.T01
Chr2 exon 19232494 19232685 19232494 ID=MsG0280007688.01.T01:exon:10150;Parent=MsG0280007688.01.T01
Chr2 exon 19232952 19233176 19232952 ID=MsG0280007688.01.T01:exon:10149;Parent=MsG0280007688.01.T01
Chr2 CDS 19232952 19233176 19232952 ID=MsG0280007688.01.T01:cds;Parent=MsG0280007688.01.T01
Chr2 CDS 19232494 19232685 19232494 ID=MsG0280007688.01.T01:cds;Parent=MsG0280007688.01.T01
Chr2 CDS 19231486 19231651 19231486 ID=MsG0280007688.01.T01:cds;Parent=MsG0280007688.01.T01
Chr2 CDS 19230597 19231063 19230597 ID=MsG0280007688.01.T01:cds;Parent=MsG0280007688.01.T01
Chr2 three_prime_UTR 19230333 19230596 19230333 ID=MsG0280007688.01.T01:three_prime_utr;Parent=MsG0280007688.01.T01
Gene Sequence

>MsG0280007688.01.T01

ATGAACTCTTCTTTTCATCTCATATTGGCAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTTCCCTTCTCTTCAAATGCACAACTTGATCCTAACTTCTACAAGGACACTTGTCCAAATGTCACTTCCATTGTCAAACAAGTCTTAGCAAACGTTTCTCAGACAGATCCTCGTATGCTTGCCAGTTTTATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGGCTGTGATGCATCAATCTTGTTAAATGACACTGATACTATCGTGAGCGAGCAAGGAGCTAGGCCAAATAAAAACTCCATAAGAGGTTTGGATGTTGTGAATCAAATCAAAGACGCAGTGGAACTTGCTTGTCCTAGTGTTGTGTCTTGTGCGGATATTCTTGCACTTGGTGCTAATATTTCCACAGTTCTGGCTCTTGGTCCTGATTGGGAAGTTCCATTAGGAAGAAGAGATAGTTTGAATGCAAATCAAACTCTTGCTAATTCAAACCTTCCTGGTCCCCAATTTGATCTTACTCAGCTAATATCCTCCTTTGCTAAACAAGGTCTCAACATTACTGATCTTGTTGCACTTTCAGGTGCTCATACAATTGGTAGAGGTCAATGTGGATTGTTCTTTGATCGATTATACAATTTCAACGATACTAGAAAACCCGATCCAACTCTTAACACAACCTACTTACAAACATTGAGAACAATATGTCCCATTGATGGACCTAATAGCACACTCACCAATTTGGACCCAACCACTCCAGATACATTCGACTCGAGCTACTACTCAAACCTAAGGATTCAAAAGGGCTTGTTTCAGAGTGACCAAGAATTGTTTTCCACAAGCGGCGCAAACACCACTGCCATTGTCAATAGTTTCAACAACAACCAAACTCTTTTCTTTGAAGCTTTTAAGGCCTCTATGATTAAAATGGGTAATATTGGAGTGTTAAATGAAACTCAAGGTGAAGTTAGAACACACTGTAACTTTGTTAATACTGTTAGCCTTGCTACCAAAGTCACCAAGGAAGATGGTACTGTTAGCTCATTCTAA

Protein sequence

>MsG0280007688.01.T01

MNSSFHLILAALCCVVVVLGGFPFSSNAQLDPNFYKDTCPNVTSIVKQVLANVSQTDPRMLASFIRLHFHDCFVQGCDASILLNDTDTIVSEQGARPNKNSIRGLDVVNQIKDAVELACPSVVSCADILALGANISTVLALGPDWEVPLGRRDSLNANQTLANSNLPGPQFDLTQLISSFAKQGLNITDLVALSGAHTIGRGQCGLFFDRLYNFNDTRKPDPTLNTTYLQTLRTICPIDGPNSTLTNLDPTTPDTFDSSYYSNLRIQKGLFQSDQELFSTSGANTTAIVNSFNNNQTLFFEAFKASMIKMGNIGVLNETQGEVRTHCNFVNTVSLATKVTKEDGTVSSF*