AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007685.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007685.01.T01 MTR_2g029830 97.183 355 6 1 1 351 1 355 0.0 697
MsG0280007685.01.T01 MTR_2g029820 79.272 357 65 3 1 350 1 355 0.0 572
MsG0280007685.01.T01 MTR_2g029815 80.460 348 63 2 1 343 1 348 0.0 569
MsG0280007685.01.T01 MTR_2g029800 80.870 345 57 3 1 338 1 343 0.0 566
MsG0280007685.01.T01 MTR_2g029830 96.809 282 5 1 74 351 6 287 0.0 551
MsG0280007685.01.T01 MTR_2g028980 70.112 358 97 4 1 351 1 355 1.01e-179 502
MsG0280007685.01.T01 MTR_2g029740 70.112 358 97 4 1 351 1 355 3.39e-178 498
MsG0280007685.01.T01 MTR_2g029750 69.553 358 98 4 1 351 1 354 1.51e-177 496
MsG0280007685.01.T01 MTR_2g029860 69.602 352 95 4 4 349 6 351 1.23e-173 486
MsG0280007685.01.T01 MTR_2g029850 70.506 356 92 5 1 349 1 350 6.70e-173 484
MsG0280007685.01.T01 MTR_2g029560 67.463 335 98 2 1 331 4 331 1.74e-161 455
MsG0280007685.01.T01 MTR_2g029910 65.805 348 107 5 7 349 11 351 2.69e-159 450
MsG0280007685.01.T01 MTR_2g029730 66.566 332 100 2 4 331 8 332 8.45e-158 446
MsG0280007685.01.T01 MTR_7g093370 58.025 324 127 3 7 325 52 371 7.33e-128 371
MsG0280007685.01.T01 MTR_1g054205 55.046 327 140 3 4 325 2 326 2.38e-123 358
MsG0280007685.01.T01 MTR_5g021060 51.325 302 142 2 28 325 30 330 1.49e-105 313
MsG0280007685.01.T01 MTR_4g125940 50.151 331 156 4 2 326 3 330 1.82e-102 305
MsG0280007685.01.T01 MTR_8g076820 48.845 303 150 2 28 326 30 331 2.60e-102 305
MsG0280007685.01.T01 MTR_2g040000 47.321 336 163 5 1 326 1 332 1.32e-98 295
MsG0280007685.01.T01 MTR_5g017860 47.678 323 155 5 8 325 13 326 2.16e-98 295
MsG0280007685.01.T01 MTR_2g084080 46.012 326 163 3 4 325 1 317 5.54e-96 288
MsG0280007685.01.T01 MTR_5g017850 45.820 323 161 5 8 325 13 326 3.62e-95 286
MsG0280007685.01.T01 MTR_4g125940 54.348 276 118 3 57 326 2 275 1.44e-94 283
MsG0280007685.01.T01 MTR_3g094650 47.040 321 152 5 7 321 10 318 6.88e-93 280
MsG0280007685.01.T01 MTR_1g022970 47.682 302 154 1 28 325 46 347 7.44e-93 281
MsG0280007685.01.T01 MTR_2g084110 45.092 326 166 3 4 325 1 317 4.62e-92 278
MsG0280007685.01.T01 MTR_3g072190 45.231 325 163 4 7 325 3 318 6.12e-92 278
MsG0280007685.01.T01 MTR_7g072510 46.711 304 149 3 26 325 18 312 1.80e-91 276
MsG0280007685.01.T01 MTR_2g084000 46.789 327 161 4 4 325 1 319 2.43e-91 276
MsG0280007685.01.T01 MTR_4g083710 46.407 334 160 6 1 325 1 324 1.34e-90 275
MsG0280007685.01.T01 MTR_2g084090 44.954 327 166 4 4 325 1 318 4.31e-90 273
MsG0280007685.01.T01 MTR_3g466200 46.319 326 156 6 7 325 7 320 8.82e-90 272
MsG0280007685.01.T01 MTR_5g074970 46.061 330 159 6 4 325 8 326 1.43e-89 272
MsG0280007685.01.T01 MTR_4g029200 46.452 310 153 3 20 325 38 338 5.25e-89 271
MsG0280007685.01.T01 MTR_2g084020 44.479 326 169 3 4 325 1 318 5.96e-89 270
MsG0280007685.01.T01 MTR_2g084010 44.785 326 168 3 4 325 1 318 1.01e-88 270
MsG0280007685.01.T01 MTR_4g029170 46.688 317 154 5 15 325 14 321 3.93e-88 268
MsG0280007685.01.T01 MTR_5g083860 44.753 324 162 5 8 325 13 325 7.92e-88 267
MsG0280007685.01.T01 MTR_3g094670 46.177 327 161 4 1 321 1 318 2.40e-87 266
MsG0280007685.01.T01 MTR_7g072480 44.985 329 164 4 1 325 1 316 5.51e-87 265
MsG0280007685.01.T01 MTR_5g049280 43.770 313 167 6 22 326 27 338 1.95e-86 264
MsG0280007685.01.T01 MTR_3g094630 47.385 325 153 5 7 325 10 322 2.07e-85 261
MsG0280007685.01.T01 MTR_5g074760 44.444 324 165 5 11 327 8 323 2.30e-85 261
MsG0280007685.01.T01 MTR_5g074740 44.410 322 164 5 11 325 8 321 2.96e-85 261
MsG0280007685.01.T01 MTR_4g046713 43.887 319 171 4 12 325 11 326 4.08e-85 261
MsG0280007685.01.T01 MTR_4g029180 47.333 300 143 5 32 325 31 321 1.54e-84 259
MsG0280007685.01.T01 MTR_4g029190 46.906 307 147 6 26 325 43 340 2.60e-84 259
MsG0280007685.01.T01 MTR_1g115900 42.154 325 171 6 8 326 9 322 7.39e-84 258
MsG0280007685.01.T01 MTR_2g088770 42.857 322 171 7 11 326 12 326 1.60e-83 256
MsG0280007685.01.T01 MTR_4g122640 43.894 303 161 4 28 325 38 336 2.99e-83 256
MsG0280007685.01.T01 MTR_5g074710 46.580 307 149 6 26 325 23 321 3.71e-83 255
MsG0280007685.01.T01 MTR_4g074995 46.440 323 141 8 11 325 10 308 4.30e-83 254
MsG0280007685.01.T01 MTR_5g014100 44.444 306 162 3 28 325 26 331 6.15e-83 255
MsG0280007685.01.T01 MTR_4g114210 42.236 322 169 7 13 325 7 320 5.53e-82 252
MsG0280007685.01.T01 MTR_2g008710 45.033 302 151 6 32 325 31 325 1.24e-81 251
MsG0280007685.01.T01 MTR_3g466180 44.479 317 163 3 13 325 16 323 1.32e-81 251
MsG0280007685.01.T01 MTR_7g107520 42.331 326 178 5 4 325 1 320 9.64e-81 249
MsG0280007685.01.T01 MTR_4g031140 40.909 308 173 4 28 331 28 330 5.26e-80 248
MsG0280007685.01.T01 MTR_2g029880 60.185 216 67 5 138 349 7 207 1.16e-79 243
MsG0280007685.01.T01 MTR_5g074860 42.593 324 171 5 8 324 9 324 1.89e-79 246
MsG0280007685.01.T01 MTR_4g030890 41.479 311 173 4 23 329 95 400 2.43e-78 246
MsG0280007685.01.T01 MTR_4g074990 43.653 323 147 7 11 325 10 305 8.10e-78 241
MsG0280007685.01.T01 MTR_3g467600 42.593 324 172 4 9 325 8 324 2.90e-77 240
MsG0280007685.01.T01 MTR_4g133800 42.953 298 155 7 33 325 46 333 7.96e-76 237
MsG0280007685.01.T01 MTR_3g092990 39.688 320 186 3 12 326 10 327 1.18e-75 236
MsG0280007685.01.T01 MTR_2g437770 42.345 307 161 7 25 326 47 342 6.40e-75 235
MsG0280007685.01.T01 MTR_7g026990 37.920 327 189 4 4 326 7 323 1.94e-74 233
MsG0280007685.01.T01 MTR_7g086820 40.461 304 168 6 26 325 18 312 5.76e-74 231
MsG0280007685.01.T01 MTR_3g072190 45.946 259 127 3 71 325 2 251 2.49e-73 228
MsG0280007685.01.T01 MTR_5g022870 40.909 308 168 8 23 325 18 316 6.81e-73 229
MsG0280007685.01.T01 MTR_1g101830 41.042 307 169 6 24 325 23 322 1.48e-72 228
MsG0280007685.01.T01 MTR_4g087965 40.984 305 169 6 27 322 41 343 3.63e-72 228
MsG0280007685.01.T01 MTR_8g075100 40.397 302 168 6 28 325 26 319 3.68e-72 227
MsG0280007685.01.T01 MTR_1g038680 41.060 302 168 6 32 325 33 332 3.75e-72 228
MsG0280007685.01.T01 MTR_6g043240 41.284 327 166 9 28 347 42 349 2.70e-71 226
MsG0280007685.01.T01 MTR_1g086320 38.602 329 188 5 7 325 9 333 4.97e-71 224
MsG0280007685.01.T01 MTR_1g086490 39.521 334 185 6 7 325 9 340 5.33e-71 225
MsG0280007685.01.T01 MTR_4g074980 41.562 320 147 8 11 325 10 294 6.73e-71 223
MsG0280007685.01.T01 MTR_1g009750 42.671 307 164 6 27 325 26 328 9.13e-71 224
MsG0280007685.01.T01 MTR_4g132490 39.062 320 181 6 15 325 13 327 1.75e-69 221
MsG0280007685.01.T01 MTR_6g043280 40.850 306 163 7 28 327 41 334 1.79e-69 221
MsG0280007685.01.T01 MTR_7g029030 40.432 324 174 6 11 325 7 320 3.42e-69 219
MsG0280007685.01.T01 MTR_4g095450 41.486 323 169 8 8 321 9 320 2.92e-68 217
MsG0280007685.01.T01 MTR_5g016010 40.129 309 174 5 24 324 23 328 4.38e-68 217
MsG0280007685.01.T01 MTR_2g008160 40.514 311 169 7 24 325 20 323 1.97e-67 215
MsG0280007685.01.T01 MTR_4g127670 42.244 303 161 6 27 321 23 319 2.34e-67 215
MsG0280007685.01.T01 MTR_1g025980 38.344 326 189 6 4 325 1 318 5.92e-67 214
MsG0280007685.01.T01 MTR_4g074980 45.455 253 121 6 11 255 10 253 1.25e-66 211
MsG0280007685.01.T01 MTR_1g090760 37.920 327 193 5 8 326 7 331 1.72e-66 213
MsG0280007685.01.T01 MTR_7g086870 39.935 308 163 8 26 326 20 312 1.51e-65 210
MsG0280007685.01.T01 MTR_6g027440 38.629 321 180 8 11 325 5 314 2.39e-65 209
MsG0280007685.01.T01 MTR_5g074860 38.438 320 151 4 8 324 9 285 4.27e-65 208
MsG0280007685.01.T01 MTR_5g033470 38.978 313 172 10 26 325 71 377 5.51e-65 210
MsG0280007685.01.T01 MTR_1g077000 37.748 302 171 7 28 325 39 327 9.28e-64 206
MsG0280007685.01.T01 MTR_3g092990 37.152 323 184 5 9 326 8 316 2.41e-63 204
MsG0280007685.01.T01 MTR_2g099175 37.821 312 172 8 27 326 35 336 4.38e-63 204
MsG0280007685.01.T01 MTR_2g008730 38.906 329 161 7 6 325 4 301 3.17e-62 201
MsG0280007685.01.T01 MTR_6g043460 39.333 300 165 7 28 321 36 324 3.43e-62 202
MsG0280007685.01.T01 MTR_8g062780 37.003 327 187 6 7 325 9 324 3.46e-62 202
MsG0280007685.01.T01 MTR_0155s0040 35.455 330 186 8 8 325 1 315 6.57e-61 198
MsG0280007685.01.T01 MTR_3g105790 38.284 303 173 5 26 321 23 318 7.22e-60 196
MsG0280007685.01.T01 MTR_1g009750 39.088 307 158 7 27 325 26 311 1.04e-59 195
MsG0280007685.01.T01 MTR_1g066710 36.893 309 180 5 26 327 25 325 6.12e-59 193
MsG0280007685.01.T01 MTR_0286s0010 37.621 311 179 8 24 325 30 334 1.06e-58 193
MsG0280007685.01.T01 MTR_6g008075 37.621 311 179 8 24 325 30 334 1.06e-58 193
MsG0280007685.01.T01 MTR_2g067440 34.925 335 180 7 26 326 58 388 1.02e-57 192
MsG0280007685.01.T01 MTR_2g078610 35.455 330 174 8 28 321 76 402 8.99e-57 190
MsG0280007685.01.T01 MTR_2g077990 35.241 332 176 8 26 321 74 402 2.60e-56 189
MsG0280007685.01.T01 MTR_1g066380 35.922 309 183 5 26 327 25 325 1.95e-54 181
MsG0280007685.01.T01 MTR_2g008160 36.156 307 153 6 24 325 20 288 2.87e-54 180
MsG0280007685.01.T01 MTR_4g132110 35.556 315 188 5 23 330 27 333 2.21e-53 179
MsG0280007685.01.T01 MTR_1g066640 36.246 309 182 5 26 327 25 325 2.34e-53 179
MsG0280007685.01.T01 MTR_2g078280 35.404 322 169 8 26 311 74 392 4.29e-53 180
MsG0280007685.01.T01 MTR_1g066680 35.922 309 182 6 26 327 25 324 3.38e-52 176
MsG0280007685.01.T01 MTR_0147s0010 33.739 329 162 6 28 324 77 381 3.54e-52 177
MsG0280007685.01.T01 MTR_4g132110 35.625 320 186 7 23 330 27 338 8.88e-52 175
MsG0280007685.01.T01 MTR_2g067450 36.156 307 182 7 26 324 9 309 1.47e-51 174
MsG0280007685.01.T01 MTR_2g008160 42.487 193 101 4 24 216 20 202 8.58e-45 153
MsG0280007685.01.T01 MTR_1g066380 36.538 260 150 5 75 327 6 257 1.19e-43 151
MsG0280007685.01.T01 MTR_7g072490 38.618 246 92 4 73 318 1 187 2.48e-42 146
MsG0280007685.01.T01 MTR_3g105790 37.815 238 138 4 91 321 8 242 3.92e-41 144
MsG0280007685.01.T01 MTR_3g072210 42.932 191 96 4 140 325 56 238 6.83e-41 144
MsG0280007685.01.T01 MTR_5g074700 39.056 233 113 6 101 326 5 215 1.26e-40 142
MsG0280007685.01.T01 MTR_3g072260 51.562 128 58 1 13 136 7 134 3.66e-36 128
MsG0280007685.01.T01 MTR_2g029930 56.522 115 22 3 11 111 2 102 2.43e-32 117
MsG0280007685.01.T01 MTR_2g077980 30.605 281 146 11 90 326 11 286 2.71e-26 106
MsG0280007685.01.T01 MTR_5g058120 38.037 163 84 4 163 321 6 155 2.91e-25 102
MsG0280007685.01.T01 MTR_2g078560 29.204 226 123 6 134 324 96 319 5.31e-23 98.2
MsG0280007685.01.T01 MTR_3g462850 38.298 141 82 5 190 326 11 150 6.61e-22 90.9
MsG0280007685.01.T01 MTR_7g086790 31.915 188 110 5 75 262 17 186 1.16e-21 91.7
MsG0280007685.01.T01 MTR_1g098320 43.750 96 52 1 246 341 47 140 3.61e-19 83.2
MsG0280007685.01.T01 MTR_1g089005 37.692 130 74 2 14 137 1 129 3.76e-19 83.6
MsG0280007685.01.T01 MTR_6g048160 56.338 71 27 2 67 137 22 88 1.87e-17 77.0
MsG0280007685.01.T01 MTR_4g114220 47.436 78 31 2 55 132 30 97 2.60e-16 75.5
MsG0280007685.01.T01 MTR_5g074770 42.529 87 49 1 238 324 23 108 1.44e-15 72.4
MsG0280007685.01.T01 MTR_7g107500 41.414 99 54 3 227 325 3 97 4.62e-14 67.8
MsG0280007685.01.T01 MTR_4g012865 45.588 68 37 0 28 95 77 144 7.60e-14 68.9
MsG0280007685.01.T01 MTR_7g086810 30.579 121 58 1 26 146 4 98 1.86e-12 66.6
MsG0280007685.01.T01 MTR_3g107060 27.344 256 134 9 60 309 106 315 7.29e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007685.01.T01 AT5G06730 53.602 347 153 2 8 350 13 355 2.33e-127 369
MsG0280007685.01.T01 AT2G38380 55.090 334 135 4 23 351 26 349 8.43e-126 365
MsG0280007685.01.T01 AT5G06720 55.280 322 140 1 8 325 12 333 2.05e-125 363
MsG0280007685.01.T01 AT2G38390 53.453 333 140 4 24 351 27 349 3.66e-123 358
MsG0280007685.01.T01 AT3G32980 53.977 352 153 4 1 343 1 352 1.11e-122 357
MsG0280007685.01.T01 AT3G49120 54.412 340 146 4 13 343 14 353 6.06e-122 355
MsG0280007685.01.T01 AT3G49110 54.070 344 147 5 9 343 13 354 5.01e-120 350
MsG0280007685.01.T01 AT4G08770 54.375 320 140 3 24 337 20 339 5.73e-119 348
MsG0280007685.01.T01 AT4G08780 53.125 320 144 3 24 337 20 339 4.38e-117 343
MsG0280007685.01.T01 AT5G19880 48.936 329 159 4 4 325 3 329 1.57e-106 315
MsG0280007685.01.T01 AT2G18140 50.662 302 144 2 28 325 35 335 1.46e-103 308
MsG0280007685.01.T01 AT5G66390 48.377 308 154 2 22 325 27 333 6.79e-102 304
MsG0280007685.01.T01 AT2G18150 49.013 304 150 2 26 325 34 336 9.22e-101 301
MsG0280007685.01.T01 AT4G36430 48.701 308 153 2 23 326 25 331 4.77e-100 299
MsG0280007685.01.T01 AT3G50990 48.220 309 155 2 23 327 36 343 1.75e-98 295
MsG0280007685.01.T01 AT5G19890 51.634 306 136 5 26 325 28 327 1.92e-98 295
MsG0280007685.01.T01 AT1G44970 48.026 304 154 1 26 325 43 346 3.14e-95 287
MsG0280007685.01.T01 AT1G14550 49.020 306 142 6 26 325 24 321 5.04e-93 281
MsG0280007685.01.T01 AT1G14540 48.607 323 153 6 8 325 1 315 4.53e-91 275
MsG0280007685.01.T01 AT5G05340 46.580 307 149 4 25 325 27 324 1.69e-90 274
MsG0280007685.01.T01 AT1G49570 45.902 305 156 4 26 323 46 348 4.59e-89 271
MsG0280007685.01.T01 AT1G68850 44.695 311 162 6 25 326 27 336 2.77e-88 269
MsG0280007685.01.T01 AT4G16270 45.638 298 155 3 32 325 54 348 2.22e-86 265
MsG0280007685.01.T01 AT5G58390 44.923 325 163 6 8 325 1 316 4.27e-85 260
MsG0280007685.01.T01 AT2G35380 47.020 302 152 4 32 325 34 335 1.80e-84 259
MsG0280007685.01.T01 AT2G41480 42.901 324 168 7 11 325 13 328 7.83e-82 252
MsG0280007685.01.T01 AT4G11290 40.498 321 183 4 11 325 8 326 8.11e-82 252
MsG0280007685.01.T01 AT3G21770 41.456 316 175 5 17 326 18 329 4.23e-81 250
MsG0280007685.01.T01 AT3G03670 41.824 318 177 4 12 325 8 321 3.39e-80 248
MsG0280007685.01.T01 AT5G58400 43.210 324 166 6 9 325 13 325 3.96e-80 248
MsG0280007685.01.T01 AT5G15180 40.240 333 187 7 1 325 1 329 5.87e-79 245
MsG0280007685.01.T01 AT1G71695 43.505 331 161 8 28 351 44 355 1.72e-78 244
MsG0280007685.01.T01 AT2G22420 39.157 332 187 5 8 335 9 329 3.31e-78 243
MsG0280007685.01.T01 AT4G25980 43.042 309 161 6 26 325 24 326 1.34e-77 241
MsG0280007685.01.T01 AT1G05260 39.759 332 188 7 1 326 1 326 1.58e-77 241
MsG0280007685.01.T01 AT5G64120 44.147 299 153 7 32 325 39 328 4.12e-77 240
MsG0280007685.01.T01 AT4G30170 42.857 308 161 5 26 325 25 325 1.14e-76 239
MsG0280007685.01.T01 AT3G01190 42.384 302 164 6 28 325 26 321 4.91e-76 237
MsG0280007685.01.T01 AT2G18980 42.121 330 170 7 6 325 5 323 7.44e-75 234
MsG0280007685.01.T01 AT3G49960 41.745 321 176 5 13 325 12 329 2.23e-74 233
MsG0280007685.01.T01 AT5G67400 41.486 323 178 5 11 325 10 329 5.24e-74 232
MsG0280007685.01.T01 AT5G17820 40.881 318 169 9 13 325 10 313 5.61e-74 231
MsG0280007685.01.T01 AT5G39580 43.813 299 155 6 32 325 29 319 1.55e-73 231
MsG0280007685.01.T01 AT5G17820 40.881 318 169 9 13 325 63 366 6.27e-73 231
MsG0280007685.01.T01 AT5G14130 41.049 324 176 7 12 325 12 330 9.94e-73 229
MsG0280007685.01.T01 AT5G14130 41.049 324 176 7 12 325 53 371 2.17e-72 229
MsG0280007685.01.T01 AT4G37530 41.935 310 169 5 24 325 23 329 2.78e-72 228
MsG0280007685.01.T01 AT1G05240 41.447 304 160 6 32 325 30 325 3.84e-72 227
MsG0280007685.01.T01 AT1G05250 41.447 304 160 6 32 325 30 325 3.84e-72 227
MsG0280007685.01.T01 AT5G51890 39.739 307 174 6 24 325 22 322 4.62e-71 224
MsG0280007685.01.T01 AT4G33420 38.871 319 177 8 11 325 21 325 2.56e-68 218
MsG0280007685.01.T01 AT4G33420 38.871 319 177 8 11 325 68 372 8.18e-68 218
MsG0280007685.01.T01 AT5G42180 38.182 330 184 9 1 324 1 316 1.21e-66 213
MsG0280007685.01.T01 AT5G64110 43.046 302 155 8 32 325 38 330 1.32e-66 213
MsG0280007685.01.T01 AT1G77100 39.319 323 177 7 11 325 8 319 4.07e-66 211
MsG0280007685.01.T01 AT4G37520 38.961 308 177 5 26 325 25 329 1.75e-65 210
MsG0280007685.01.T01 AT2G34060 39.216 306 173 7 27 322 41 343 1.81e-65 211
MsG0280007685.01.T01 AT5G24070 39.610 308 163 8 34 329 43 339 9.27e-65 209
MsG0280007685.01.T01 AT5G40150 38.291 316 174 6 20 325 24 328 1.75e-64 207
MsG0280007685.01.T01 AT4G26010 39.550 311 162 8 23 325 17 309 2.47e-64 207
MsG0280007685.01.T01 AT4G26010 39.610 308 160 8 26 325 48 337 2.70e-64 207
MsG0280007685.01.T01 AT5G64100 40.199 301 163 8 32 325 41 331 4.01e-64 207
MsG0280007685.01.T01 AT4G37520 38.636 308 175 6 26 325 25 326 4.60e-64 206
MsG0280007685.01.T01 AT2G39040 39.744 312 173 7 25 325 43 350 1.91e-63 206
MsG0280007685.01.T01 AT2G43480 40.066 302 158 8 36 325 45 335 4.05e-63 204
MsG0280007685.01.T01 AT4G31760 37.188 320 186 6 13 325 15 326 4.88e-63 204
MsG0280007685.01.T01 AT4G33870 34.132 334 170 7 32 322 72 398 1.15e-62 205
MsG0280007685.01.T01 AT3G28200 36.422 313 177 6 23 325 16 316 1.36e-62 202
MsG0280007685.01.T01 AT2G24800 38.312 308 175 6 26 325 29 329 4.26e-62 201
MsG0280007685.01.T01 AT4G37530 43.798 258 136 4 24 273 23 279 5.76e-62 200
MsG0280007685.01.T01 AT1G24110 37.188 320 188 7 14 325 8 322 7.46e-62 201
MsG0280007685.01.T01 AT1G30870 37.342 316 177 8 22 328 45 348 2.05e-61 200
MsG0280007685.01.T01 AT2G35380 45.344 247 127 4 87 325 1 247 3.89e-60 194
MsG0280007685.01.T01 AT4G17690 37.582 306 176 6 28 326 26 323 7.74e-60 196
MsG0280007685.01.T01 AT5G47000 36.039 308 183 6 26 326 31 331 1.93e-57 190
MsG0280007685.01.T01 AT5G22410 35.802 324 182 11 12 321 10 321 4.55e-57 189
MsG0280007685.01.T01 AT1G34510 37.377 305 171 6 26 325 20 309 2.25e-56 186
MsG0280007685.01.T01 AT4G21960 36.634 303 177 5 32 327 35 329 1.73e-55 184
MsG0280007685.01.T01 AT3G17070 35.398 339 196 9 2 325 9 339 1.01e-52 177
MsG0280007685.01.T01 AT2G37130 34.304 309 187 6 25 325 27 327 6.04e-50 170
MsG0280007685.01.T01 AT2G37130 34.768 302 181 6 32 325 3 296 1.28e-49 168
MsG0280007685.01.T01 AT4G25980 48.795 166 81 3 24 189 67 228 2.28e-47 162
MsG0280007685.01.T01 AT5G39580 46.988 166 83 3 32 197 29 189 5.89e-38 136
MsG0280007685.01.T01 AT3G17070 35.075 268 153 9 70 325 18 276 2.48e-37 135
MsG0280007685.01.T01 AT2G24800 40.854 164 93 1 26 189 29 188 1.42e-34 127

Find 75 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTTCTTTGAGAGCTTTA+AGG 0.108597 2:+19171951 MsG0280007685.01.T01:CDS
CCTCTTAGAGAGTTGTTATT+TGG 0.135333 2:-19170870 None:intergenic
CTCCAATCTTCAAGTGAAAA+AGG 0.154152 2:+19171843 MsG0280007685.01.T01:CDS
TAAGGCTGCAATGATTAAAA+TGG 0.175071 2:+19171969 MsG0280007685.01.T01:CDS
GGCAATATTGGTGTGCTAAC+AGG 0.250866 2:+19171991 MsG0280007685.01.T01:CDS
CAATTCCTTGGATCAACTTA+AGG 0.321028 2:+19171478 MsG0280007685.01.T01:CDS
TCCGGCTCCATTCAATTCCT+TGG 0.334088 2:+19171466 MsG0280007685.01.T01:CDS
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2:-19171817 None:intergenic
TTTCAGGTGGCTCATACATT+TGG 0.341724 2:+19171637 MsG0280007685.01.T01:intron
ATGAGAGGACGTGTTCTTCT+TGG 0.350836 2:+19172241 MsG0280007685.01.T01:three_prime_UTR
CCTAGTTGGACGGTTCCTTT+AGG 0.356265 2:+19171395 MsG0280007685.01.T01:CDS
AGGAGTCGTTGGATCGAAAT+TGG 0.358608 2:-19171797 None:intergenic
AGTTATAACTTATTTATTAG+TGG 0.370052 2:-19172179 None:intergenic
TGCTCAAGCATCCTCTGTTC+TGG 0.373097 2:+19170977 MsG0280007685.01.T01:CDS
ATGATTAAAATGGGCAATAT+TGG 0.376995 2:+19171979 MsG0280007685.01.T01:CDS
ATCCTCTAATGATTCTACTA+TGG 0.377320 2:-19172091 None:intergenic
CCAAATAACAACTCTCTAAG+AGG 0.382329 2:+19170870 MsG0280007685.01.T01:CDS
ATCCATAGTAGAATCATTAG+AGG 0.411122 2:+19172089 MsG0280007685.01.T01:CDS
TAACAACTCTCTAAGAGGTT+TGG 0.412916 2:+19170875 MsG0280007685.01.T01:CDS
AAGTTGTGCATCTGAGGAAA+AGG 0.427974 2:-19169741 None:intergenic
ATTTGCAAGTGTTCGGTTTG+CGG 0.429077 2:-19171435 None:intergenic
CAAGAGTTGTTCTCAACATC+TGG 0.429128 2:+19171883 MsG0280007685.01.T01:CDS
AAGAGCTCATTGCGCACAAT+TGG 0.433277 2:+19171660 MsG0280007685.01.T01:CDS
TTGTACAACTTCAGCAGTAC+TGG 0.437790 2:+19171691 MsG0280007685.01.T01:CDS
AGTTGATCCAAGGAATTGAA+TGG 0.443636 2:-19171473 None:intergenic
GAATTTGTTGACAATGCTAA+TGG 0.451627 2:-19171914 None:intergenic
AAGGCTGCAATGATTAAAAT+GGG 0.452725 2:+19171970 MsG0280007685.01.T01:CDS
GGACGGTTCCTTTAGGAAGA+AGG 0.460113 2:+19171402 MsG0280007685.01.T01:CDS
AGAACAACTCTTGATCACTT+TGG 0.468970 2:-19171873 None:intergenic
AAACCATCCCTTCTTCCTAA+AGG 0.473767 2:-19171410 None:intergenic
TCAGCACAAGAAACTGTGTT+AGG 0.474603 2:-19170939 None:intergenic
GCATGCTTGCTAGTCTCGTC+AGG 0.475861 2:+19169849 MsG0280007685.01.T01:CDS
AAGTAAGTTGTGTTAAGAGT+TGG 0.480928 2:-19171724 None:intergenic
CTAATAAATAAGTTATAACT+AGG 0.500024 2:+19172182 MsG0280007685.01.T01:three_prime_UTR
TTTGTGCCAGGTCCACCATT+GGG 0.501871 2:-19171769 None:intergenic
ACTTGCAAATCAAAATCTTC+CGG 0.502470 2:+19171448 MsG0280007685.01.T01:CDS
GGTGTGCTAACAGGGACAAA+AGG 0.508960 2:+19172000 MsG0280007685.01.T01:CDS
TTTATTTATAGACAGACAAA+TGG 0.509110 2:-19169615 None:intergenic
AGTTGTGTTAAGAGTTGGAT+CGG 0.517053 2:-19171719 None:intergenic
TCAAATTTATCAGGAGTCGT+TGG 0.517441 2:-19171808 None:intergenic
TCCAAGGAATTGAATGGAGC+CGG 0.518137 2:-19171467 None:intergenic
GTTTGTGCCAGGTCCACCAT+TGG 0.522110 2:-19171770 None:intergenic
GCAATATTGGTGTGCTAACA+GGG 0.525835 2:+19171992 MsG0280007685.01.T01:CDS
CCTAAAGGAACCGTCCAACT+AGG 0.525895 2:-19171395 None:intergenic
TGATTCTACTATGGATGCTA+TGG 0.530449 2:-19172082 None:intergenic
TACAGGCACAAGGTCCTAGT+TGG 0.531508 2:+19171381 MsG0280007685.01.T01:intron
ATATGTCCCAATGGTGGACC+TGG 0.533119 2:+19171763 MsG0280007685.01.T01:CDS
GACGAGACTAGCAAGCATGC+GGG 0.536082 2:-19169846 None:intergenic
AAGGCTGCATTTACTGCTCA+AGG 0.536802 2:+19171497 MsG0280007685.01.T01:CDS
GACGGTTCCTTTAGGAAGAA+GGG 0.540262 2:+19171403 MsG0280007685.01.T01:CDS
AGTTGTGCATCTGAGGAAAA+GGG 0.541172 2:-19169740 None:intergenic
TCGTTGGATCGAAATTGGTA+AGG 0.541757 2:-19171792 None:intergenic
TGTTAAGACATTGCTAACAA+TGG 0.542625 2:-19169804 None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG 0.555195 2:-19171718 None:intergenic
CTAACAATGGAACTAACAGT+TGG 0.570134 2:-19169791 None:intergenic
CAACTAGATCAGTAGTATTG+AGG 0.571363 2:-19171520 None:intergenic
TCCTATGCTTTGTATATGAG+AGG 0.580419 2:+19172226 MsG0280007685.01.T01:three_prime_UTR
GGGACTAAGTTGTGCATCTG+AGG 0.581590 2:-19169747 None:intergenic
TTCTACTATGGATGCTATGG+TGG 0.582608 2:-19172079 None:intergenic
TGCAGCCTTAAGTTGATCCA+AGG 0.583105 2:-19171483 None:intergenic
AAATTGGTAAGGTTTGTGCC+AGG 0.593226 2:-19171781 None:intergenic
CGCACAATATGTCCCAATGG+TGG 0.595195 2:+19171757 MsG0280007685.01.T01:CDS
ACACCACATAGAAGTTGCTA+AGG 0.602167 2:-19169687 None:intergenic
TGACGAGACTAGCAAGCATG+CGG 0.608326 2:-19169847 None:intergenic
GGCACAAGGTCCTAGTTGGA+CGG 0.608836 2:+19171385 MsG0280007685.01.T01:intron
ATAGTAGAATCATTAGAGGA+TGG 0.616700 2:+19172093 MsG0280007685.01.T01:CDS
CTGCGCACAATATGTCCCAA+TGG 0.617077 2:+19171754 MsG0280007685.01.T01:CDS
GTTCCTTTAGGAAGAAGGGA+TGG 0.625949 2:+19171407 MsG0280007685.01.T01:CDS
ACTCCTTAGCAACTTCTATG+TGG 0.626841 2:+19169684 MsG0280007685.01.T01:CDS
TATAGACAGACAAATGGTCA+TGG 0.628572 2:-19169609 None:intergenic
TCCTCTCATATACAAAGCAT+AGG 0.654286 2:-19172227 None:intergenic
ACGAGACTAGCAAGCATGCG+GGG 0.672753 2:-19169845 None:intergenic
AGTATTGTTCAGCAAAACTG+AGG 0.702311 2:-19170817 None:intergenic
ATATATATGTACCAGAACAG+AGG 0.710985 2:-19170988 None:intergenic
GCTGAAATAATACAGGCACA+AGG 0.714444 2:+19171371 MsG0280007685.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATTATAATATAATA+TGG + Chr2:19169978-19169997 MsG0280007685.01.T01:intron 0.0%
!!! ATAATTTTTCGAAAAAAATA+GGG + Chr2:19170381-19170400 MsG0280007685.01.T01:intron 10.0%
!!! TATAATTTTTCGAAAAAAAT+AGG + Chr2:19170380-19170399 MsG0280007685.01.T01:intron 10.0%
!! AAATATATTCAAAGTATAAC+GGG + Chr2:19170608-19170627 MsG0280007685.01.T01:intron 15.0%
!! AGTTATAACTTATTTATTAG+TGG - Chr2:19172182-19172201 None:intergenic 15.0%
!! ATAAAAATATATATACGTTC+AGG + Chr2:19171247-19171266 MsG0280007685.01.T01:intron 15.0%
!! ATAAATTACACAACTAAAAA+TGG + Chr2:19170039-19170058 MsG0280007685.01.T01:intron 15.0%
!! CTAATAAATAAGTTATAACT+AGG + Chr2:19172182-19172201 MsG0280007685.01.T01:three_prime_UTR 15.0%
!! GAAATATATTCAAAGTATAA+CGG + Chr2:19170607-19170626 MsG0280007685.01.T01:intron 15.0%
!!! ACAGAAATATATTTAGAATT+AGG - Chr2:19171016-19171035 None:intergenic 15.0%
!!! CAGAAATATATTTAGAATTA+GGG - Chr2:19171015-19171034 None:intergenic 15.0%
!!! TATATATTTTTCTCAATTTC+AGG + Chr2:19171621-19171640 MsG0280007685.01.T01:intron 15.0%
!!! TTTTTAGTTGTGTAATTTAT+AGG - Chr2:19170039-19170058 None:intergenic 15.0%
!! TAGTAATGTCTAAAAATTGA+AGG + Chr2:19170460-19170479 MsG0280007685.01.T01:intron 20.0%
!! TGATATGTTGTTGATATAAA+AGG + Chr2:19170294-19170313 MsG0280007685.01.T01:intron 20.0%
!! TTTATTTATAGACAGACAAA+TGG - Chr2:19169618-19169637 None:intergenic 20.0%
!!! TCCTTCTATTTTTAGTAAAT+GGG - Chr2:19170185-19170204 None:intergenic 20.0%
!!! TCTAATTTAACGTCTTTTTT+AGG - Chr2:19170102-19170121 None:intergenic 20.0%
!!! TTCCTTCTATTTTTAGTAAA+TGG - Chr2:19170186-19170205 None:intergenic 20.0%
! ACTAAAAATAGAAGGAACAA+AGG + Chr2:19170189-19170208 MsG0280007685.01.T01:intron 25.0%
! ATGATTAAAATGGGCAATAT+TGG + Chr2:19171979-19171998 MsG0280007685.01.T01:CDS 25.0%
! CATAATATGTGCATTTGATA+TGG + Chr2:19171109-19171128 MsG0280007685.01.T01:intron 25.0%
! CGCATAAATTATAGAACATA+TGG - Chr2:19170755-19170774 None:intergenic 25.0%
! TAGTTCTTGTCAAATTTATC+AGG - Chr2:19171820-19171839 None:intergenic 25.0%
! TCCACTGTTAAGTTTAAAAA+CGG - Chr2:19170660-19170679 None:intergenic 25.0%
! TCCCATTTACTAAAAATAGA+AGG + Chr2:19170181-19170200 MsG0280007685.01.T01:intron 25.0%
! TTTACTGAACTAGTAAAGTT+AGG + Chr2:19170525-19170544 MsG0280007685.01.T01:intron 25.0%
!! AAAGTTGATTCATATACACT+TGG - Chr2:19170486-19170505 None:intergenic 25.0%
!! ATATTTTTCTCAATTTCAGG+TGG + Chr2:19171624-19171643 MsG0280007685.01.T01:intron 25.0%
!! ATGTGATCTATAATTTTCAC+AGG + Chr2:19170785-19170804 MsG0280007685.01.T01:intron 25.0%
!! GCATTTGAAATTTAATGACA+AGG - Chr2:19171048-19171067 None:intergenic 25.0%
!! GTTAGCAGTAACTTTTTAAT+AGG + Chr2:19170705-19170724 MsG0280007685.01.T01:intron 25.0%
!! TGTGATCTATAATTTTCACA+GGG + Chr2:19170786-19170805 MsG0280007685.01.T01:intron 25.0%
AAGGCTGCAATGATTAAAAT+GGG + Chr2:19171970-19171989 MsG0280007685.01.T01:CDS 30.0%
AAGTAAGTTGTGTTAAGAGT+TGG - Chr2:19171727-19171746 None:intergenic 30.0%
ACTTGCAAATCAAAATCTTC+CGG + Chr2:19171448-19171467 MsG0280007685.01.T01:CDS 30.0%
ATAGTAGAATCATTAGAGGA+TGG + Chr2:19172093-19172112 MsG0280007685.01.T01:CDS 30.0%
ATATATATGTACCAGAACAG+AGG - Chr2:19170991-19171010 None:intergenic 30.0%
ATCCATAGTAGAATCATTAG+AGG + Chr2:19172089-19172108 MsG0280007685.01.T01:CDS 30.0%
ATCCTCTAATGATTCTACTA+TGG - Chr2:19172094-19172113 None:intergenic 30.0%
TAAGGCTGCAATGATTAAAA+TGG + Chr2:19171969-19171988 MsG0280007685.01.T01:CDS 30.0%
TACCTATGCTGAAATAATAC+AGG + Chr2:19171364-19171383 MsG0280007685.01.T01:intron 30.0%
TCCAATCTTCAAGTGAAAAA+GGG + Chr2:19171844-19171863 MsG0280007685.01.T01:CDS 30.0%
TGTTAAGACATTGCTAACAA+TGG - Chr2:19169807-19169826 None:intergenic 30.0%
TTCGAAAAGACAATTTACAC+AGG - Chr2:19170590-19170609 None:intergenic 30.0%
TTTATTCCTTCTCTCTTTAG+TGG - Chr2:19170255-19170274 None:intergenic 30.0%
! TTTAGTGGTAGAATGGTTTT+AGG - Chr2:19170240-19170259 None:intergenic 30.0%
!! ACAAGTTTTGCTGTAAAAAG+TGG - Chr2:19169771-19169790 None:intergenic 30.0%
!! ACCGTTTTTAAACTTAACAG+TGG + Chr2:19170656-19170675 MsG0280007685.01.T01:intron 30.0%
!! CAAGTTTTGCTGTAAAAAGT+GGG - Chr2:19169770-19169789 None:intergenic 30.0%
!! GAATTTGTTGACAATGCTAA+TGG - Chr2:19171917-19171936 None:intergenic 30.0%
!! GTACTTCTCTTACTTTTCTT+AGG - Chr2:19170355-19170374 None:intergenic 30.0%
!!! CTTTTTTAGGAAACGTATGT+TGG - Chr2:19170089-19170108 None:intergenic 30.0%
!!! GATTTTGATTTGCAAGTGTT+CGG - Chr2:19171445-19171464 None:intergenic 30.0%
AAACGGTCCTATAGAATACA+AGG - Chr2:19170643-19170662 None:intergenic 35.0%
AACGGTCCTATAGAATACAA+GGG - Chr2:19170642-19170661 None:intergenic 35.0%
AGAACAACTCTTGATCACTT+TGG - Chr2:19171876-19171895 None:intergenic 35.0%
AGTATTGTTCAGCAAAACTG+AGG - Chr2:19170820-19170839 None:intergenic 35.0%
AGTTGATCCAAGGAATTGAA+TGG - Chr2:19171476-19171495 None:intergenic 35.0%
AGTTGTGTTAAGAGTTGGAT+CGG - Chr2:19171722-19171741 None:intergenic 35.0%
ATTCTACCACTAAAGAGAGA+AGG + Chr2:19170246-19170265 MsG0280007685.01.T01:intron 35.0%
CAACTAGATCAGTAGTATTG+AGG - Chr2:19171523-19171542 None:intergenic 35.0%
CAATTCCTTGGATCAACTTA+AGG + Chr2:19171478-19171497 MsG0280007685.01.T01:CDS 35.0%
CCAAATAACAACTCTCTAAG+AGG + Chr2:19170870-19170889 MsG0280007685.01.T01:CDS 35.0%
CTAACAATGGAACTAACAGT+TGG - Chr2:19169794-19169813 None:intergenic 35.0%
CTCCAATCTTCAAGTGAAAA+AGG + Chr2:19171843-19171862 MsG0280007685.01.T01:CDS 35.0%
TAATTTATAGGAGTTGCGCA+TGG - Chr2:19170027-19170046 None:intergenic 35.0%
TATAGACAGACAAATGGTCA+TGG - Chr2:19169612-19169631 None:intergenic 35.0%
TATTTCGCGTGATATTCTCT+CGG + Chr2:19171272-19171291 MsG0280007685.01.T01:intron 35.0%
TCAAATTTATCAGGAGTCGT+TGG - Chr2:19171811-19171830 None:intergenic 35.0%
TCCTATGCTTTGTATATGAG+AGG + Chr2:19172226-19172245 MsG0280007685.01.T01:three_prime_UTR 35.0%
TCCTCTCATATACAAAGCAT+AGG - Chr2:19172230-19172249 None:intergenic 35.0%
TGATTCTACTATGGATGCTA+TGG - Chr2:19172085-19172104 None:intergenic 35.0%
TGCCTGTATTATTTCAGCAT+AGG - Chr2:19171369-19171388 None:intergenic 35.0%
TTCTCTCTTTAGTGGTAGAA+TGG - Chr2:19170247-19170266 None:intergenic 35.0%
! AGAGTACCCTTGTATTCTAT+AGG + Chr2:19170633-19170652 MsG0280007685.01.T01:intron 35.0%
! CCTCTTAGAGAGTTGTTATT+TGG - Chr2:19170873-19170892 None:intergenic 35.0%
! TAACAACTCTCTAAGAGGTT+TGG + Chr2:19170875-19170894 MsG0280007685.01.T01:CDS 35.0%
!! CTTTCATGACTGTTTTGTTC+TGG + Chr2:19169877-19169896 MsG0280007685.01.T01:CDS 35.0%
!!! CTCAAAGAAAGCGTTTTGAT+CGG - Chr2:19171944-19171963 None:intergenic 35.0%
AAACCATCCCTTCTTCCTAA+AGG - Chr2:19171413-19171432 None:intergenic 40.0%
AAATTGGTAAGGTTTGTGCC+AGG - Chr2:19171784-19171803 None:intergenic 40.0%
AAGTTGTGCATCTGAGGAAA+AGG - Chr2:19169744-19169763 None:intergenic 40.0%
ACACCACATAGAAGTTGCTA+AGG - Chr2:19169690-19169709 None:intergenic 40.0%
ACTCCTTAGCAACTTCTATG+TGG + Chr2:19169684-19169703 MsG0280007685.01.T01:CDS 40.0%
AGTTGTGCATCTGAGGAAAA+GGG - Chr2:19169743-19169762 None:intergenic 40.0%
ATTTCGCGTGATATTCTCTC+GGG + Chr2:19171273-19171292 MsG0280007685.01.T01:intron 40.0%
CAAGAGTTGTTCTCAACATC+TGG + Chr2:19171883-19171902 MsG0280007685.01.T01:CDS 40.0%
GCAATATTGGTGTGCTAACA+GGG + Chr2:19171992-19172011 MsG0280007685.01.T01:CDS 40.0%
GCTGAAATAATACAGGCACA+AGG + Chr2:19171371-19171390 MsG0280007685.01.T01:intron 40.0%
GTTGTGTTAAGAGTTGGATC+GGG - Chr2:19171721-19171740 None:intergenic 40.0%
TACTGATCTAGTTGCACTCT+CGG + Chr2:19171529-19171548 MsG0280007685.01.T01:intron 40.0%
TCAGCACAAGAAACTGTGTT+AGG - Chr2:19170942-19170961 None:intergenic 40.0%
TCGTTGGATCGAAATTGGTA+AGG - Chr2:19171795-19171814 None:intergenic 40.0%
TTCTACTATGGATGCTATGG+TGG - Chr2:19172082-19172101 None:intergenic 40.0%
TTGTACAACTTCAGCAGTAC+TGG + Chr2:19171691-19171710 MsG0280007685.01.T01:CDS 40.0%
! ATTTGCAAGTGTTCGGTTTG+CGG - Chr2:19171438-19171457 None:intergenic 40.0%
! CGCTTTCTTTGAGAGCTTTA+AGG + Chr2:19171951-19171970 MsG0280007685.01.T01:CDS 40.0%
! TTTCAGGTGGCTCATACATT+TGG + Chr2:19171637-19171656 MsG0280007685.01.T01:intron 40.0%
!! GCCCTTTTTCACTTGAAGAT+TGG - Chr2:19171848-19171867 None:intergenic 40.0%
!! GTTGTGCTTTTAGTTGTGCT+TGG + Chr2:19169710-19169729 MsG0280007685.01.T01:CDS 40.0%
AAGAGCTCATTGCGCACAAT+TGG + Chr2:19171660-19171679 MsG0280007685.01.T01:CDS 45.0%
AAGGCTGCATTTACTGCTCA+AGG + Chr2:19171497-19171516 MsG0280007685.01.T01:CDS 45.0%
ACTGATCTAGTTGCACTCTC+GGG + Chr2:19171530-19171549 MsG0280007685.01.T01:intron 45.0%
AGCAGTCAACTAAAGACGTG+TGG - Chr2:19169915-19169934 None:intergenic 45.0%
AGGAGTCGTTGGATCGAAAT+TGG - Chr2:19171800-19171819 None:intergenic 45.0%
ATGAGAGGACGTGTTCTTCT+TGG + Chr2:19172241-19172260 MsG0280007685.01.T01:three_prime_UTR 45.0%
GGCAATATTGGTGTGCTAAC+AGG + Chr2:19171991-19172010 MsG0280007685.01.T01:CDS 45.0%
TCCAAGGAATTGAATGGAGC+CGG - Chr2:19171470-19171489 None:intergenic 45.0%
! GACGGTTCCTTTAGGAAGAA+GGG + Chr2:19171403-19171422 MsG0280007685.01.T01:CDS 45.0%
! GTTCCTTTAGGAAGAAGGGA+TGG + Chr2:19171407-19171426 MsG0280007685.01.T01:CDS 45.0%
!! GTGCTTTTAGTTGTGCTTGG+AGG + Chr2:19169713-19169732 MsG0280007685.01.T01:CDS 45.0%
!! TGCAGCCTTAAGTTGATCCA+AGG - Chr2:19171486-19171505 None:intergenic 45.0%
!! ATTTAATCATAATAAAAATA+AGG - Chr2:19171313-19171332 None:intergenic 5.0%
CCTAAAGGAACCGTCCAACT+AGG - Chr2:19171398-19171417 None:intergenic 50.0%
CCTAGTTGGACGGTTCCTTT+AGG + Chr2:19171395-19171414 MsG0280007685.01.T01:CDS 50.0%
CGCACAATATGTCCCAATGG+TGG + Chr2:19171757-19171776 MsG0280007685.01.T01:CDS 50.0%
CTGCGCACAATATGTCCCAA+TGG + Chr2:19171754-19171773 MsG0280007685.01.T01:CDS 50.0%
GGGACTAAGTTGTGCATCTG+AGG - Chr2:19169750-19169769 None:intergenic 50.0%
GGTGTGCTAACAGGGACAAA+AGG + Chr2:19172000-19172019 MsG0280007685.01.T01:CDS 50.0%
TACAGGCACAAGGTCCTAGT+TGG + Chr2:19171381-19171400 MsG0280007685.01.T01:intron 50.0%
TCCGGCTCCATTCAATTCCT+TGG + Chr2:19171466-19171485 MsG0280007685.01.T01:CDS 50.0%
TGACGAGACTAGCAAGCATG+CGG - Chr2:19169850-19169869 None:intergenic 50.0%
TGCTCAAGCATCCTCTGTTC+TGG + Chr2:19170977-19170996 MsG0280007685.01.T01:CDS 50.0%
TTTGTGCCAGGTCCACCATT+GGG - Chr2:19171772-19171791 None:intergenic 50.0%
! GGACGGTTCCTTTAGGAAGA+AGG + Chr2:19171402-19171421 MsG0280007685.01.T01:CDS 50.0%
!! ATATGTCCCAATGGTGGACC+TGG + Chr2:19171763-19171782 MsG0280007685.01.T01:CDS 50.0%
ACGAGACTAGCAAGCATGCG+GGG - Chr2:19169848-19169867 None:intergenic 55.0%
GACGAGACTAGCAAGCATGC+GGG - Chr2:19169849-19169868 None:intergenic 55.0%
GGCACAAGGTCCTAGTTGGA+CGG + Chr2:19171385-19171404 MsG0280007685.01.T01:intron 55.0%
GTTTGTGCCAGGTCCACCAT+TGG - Chr2:19171773-19171792 None:intergenic 55.0%
! GCATGCTTGCTAGTCTCGTC+AGG + Chr2:19169849-19169868 MsG0280007685.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 19169587 19172340 19169587 ID=MsG0280007685.01;Name=MsG0280007685.01
Chr2 mRNA 19169587 19172340 19169587 ID=MsG0280007685.01.T01;Parent=MsG0280007685.01;Name=MsG0280007685.01.T01;_AED=0.49;_eAED=0.49;_QI=93|0.66|0.75|1|1|1|4|206|351
Chr2 exon 19169587 19169898 19169587 ID=MsG0280007685.01.T01:exon:10127;Parent=MsG0280007685.01.T01
Chr2 exon 19170807 19170998 19170807 ID=MsG0280007685.01.T01:exon:10128;Parent=MsG0280007685.01.T01
Chr2 exon 19171386 19171538 19171386 ID=MsG0280007685.01.T01:exon:10129;Parent=MsG0280007685.01.T01
Chr2 exon 19171643 19172340 19171643 ID=MsG0280007685.01.T01:exon:10130;Parent=MsG0280007685.01.T01
Chr2 five_prime_UTR 19169587 19169679 19169587 ID=MsG0280007685.01.T01:five_prime_utr;Parent=MsG0280007685.01.T01
Chr2 CDS 19169680 19169898 19169680 ID=MsG0280007685.01.T01:cds;Parent=MsG0280007685.01.T01
Chr2 CDS 19170807 19170998 19170807 ID=MsG0280007685.01.T01:cds;Parent=MsG0280007685.01.T01
Chr2 CDS 19171386 19171538 19171386 ID=MsG0280007685.01.T01:cds;Parent=MsG0280007685.01.T01
Chr2 CDS 19171643 19172134 19171643 ID=MsG0280007685.01.T01:cds;Parent=MsG0280007685.01.T01
Chr2 three_prime_UTR 19172135 19172340 19172135 ID=MsG0280007685.01.T01:three_prime_utr;Parent=MsG0280007685.01.T01
Gene Sequence

>MsG0280007685.01.T01

ATGAACTCCTTAGCAACTTCTATGTGGTGTGTTGTGCTTTTAGTTGTGCTTGGAGGACTACCCTTTTCCTCAGATGCACAACTTAGTCCCACTTTTTACAGCAAAACTTGTCCAACTGTTAGTTCCATTGTTAGCAATGTCTTAACAAATGTTTCTAAGACAGATCCCCGCATGCTTGCTAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCTGGGATGTGATGCCTCAGTTTTGCTGAACAATACTGCTACAATCGTAAGCGAACAACAAGCTTTTCCAAATAACAACTCTCTAAGAGGTTTGGATGTTGTGAATCAGATCAAAACTGCTGTAGAAAGTGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCTGCTCAAGCATCCTCTGTTCTGGCACAAGGTCCTAGTTGGACGGTTCCTTTAGGAAGAAGGGATGGTTTAACCGCAAACCGAACACTTGCAAATCAAAATCTTCCGGCTCCATTCAATTCCTTGGATCAACTTAAGGCTGCATTTACTGCTCAAGGCCTCAATACTACTGATCTAGTGGCTCATACATTTGGAAGAGCTCATTGCGCACAATTGGTTATTCGATTGTACAACTTCAGCAGTACTGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAACTGCGCACAATATGTCCCAATGGTGGACCTGGCACAAACCTTACCAATTTCGATCCAACGACTCCTGATAAATTTGACAAGAACTACTACTCCAATCTTCAAGTGAAAAAGGGCTTACTCCAAAGTGATCAAGAGTTGTTCTCAACATCTGGTGCAGATACCATTAGCATTGTCAACAAATTCAGCACCGATCAAAACGCTTTCTTTGAGAGCTTTAAGGCTGCAATGATTAAAATGGGCAATATTGGTGTGCTAACAGGGACAAAAGGAGAGATTAGAAAACAATGCAACTTTGTGAACTCAAATTCAGCAGAACTAGATTTAGCCACCATAGCATCCATAGTAGAATCATTAGAGGATGGTATTGCTAGTGTAATATAA

Protein sequence

>MsG0280007685.01.T01

MNSLATSMWCVVLLVVLGGLPFSSDAQLSPTFYSKTCPTVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVLGCDASVLLNNTATIVSEQQAFPNNNSLRGLDVVNQIKTAVESACPNTVSCADILALAAQASSVLAQGPSWTVPLGRRDGLTANRTLANQNLPAPFNSLDQLKAAFTAQGLNTTDLVAHTFGRAHCAQLVIRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTISIVNKFSTDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSNSAELDLATIASIVESLEDGIASVI*