AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010149.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010149.01.T01 MTR_2g078540 79.803 203 13 5 1 194 1 184 5.65e-94 278
MsG0280010149.01.T01 MTR_6g042030 40.201 199 95 7 1 194 1 180 1.78e-27 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010149.01.T01 AT3G15110 46.411 209 79 7 1 194 1 191 2.36e-41 144

Find 100 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTGTTCTGTGTGGCTTT+TGG 0.261733 2:+65357633 None:intergenic
AAGTCCACAGGATATTTATT+TGG 0.262672 2:-65357613 MsG0280010149.01.T01:five_prime_UTR
TGATAGATATGTGGGCAATT+TGG 0.303070 2:-65357664 None:intergenic
AAAGAACAGATACGGATAAA+AGG 0.308058 2:+65356236 None:intergenic
ACCTTACGGTGATTGTTATC+TGG 0.349282 2:+65353308 None:intergenic
AACCGTTTGTTTGAGACGTT+TGG 0.359266 2:+65357163 None:intergenic
CACCTGTTCAAGCATTTCTC+CGG 0.359534 2:-65356376 MsG0280010149.01.T01:CDS
AGAGAAGGAGTAGAATCATA+TGG 0.370898 2:+65357287 None:intergenic
GCTTCGATCTCTTATCAATC+AGG 0.389536 2:-65353284 MsG0280010149.01.T01:CDS
GGAGGACACTGGCAGCAATT+TGG 0.393977 2:+65357234 None:intergenic
CCAAACTGGCTCAGATAAAA+CGG 0.400284 2:-65355843 MsG0280010149.01.T01:intron
TCTTCCGCTCCTTCCGCCGC+AGG 0.403419 2:-65357187 MsG0280010149.01.T01:CDS
GTCAGTAAAGGAAGAAGCAT+TGG 0.416654 2:-65356453 MsG0280010149.01.T01:CDS
AATCGTCTGAAATTGTTTGC+CGG 0.417137 2:+65356285 None:intergenic
TGCGGCGGAAGGAGCGGAAG+AGG 0.437437 2:+65357189 None:intergenic
GCCCGGAGAAATGCTTGAAC+AGG 0.450986 2:+65356374 None:intergenic
ATTGGAGACTTTGAAAGCTA+TGG 0.451641 2:-65356435 MsG0280010149.01.T01:CDS
GCTCAGACCCGCCTCGATGA+TGG 0.451902 2:+65356307 None:intergenic
TTGGAGACTTTGAAAGCTAT+GGG 0.454281 2:-65356434 MsG0280010149.01.T01:CDS
TAAGAGTGGGATGGGAAGGT+GGG 0.463167 2:+65357466 None:intergenic
GTAAGAGTGGGATGGGAAGG+TGG 0.479098 2:+65357465 None:intergenic
GAAGGTGGGGTGAGAAGAGA+AGG 0.482855 2:+65357480 None:intergenic
TCATCGAGGCGGGTCTGAGC+CGG 0.484689 2:-65356304 MsG0280010149.01.T01:CDS
TACGGTGATTGTTATCTGGC+GGG 0.486528 2:+65353312 None:intergenic
GAAAGAAGGGTCGTCGGTGG+AGG 0.487888 2:+65357259 None:intergenic
GTTCCACCCTCTCAGCCTGA+TGG 0.493414 2:-65357553 MsG0280010149.01.T01:five_prime_UTR
GAGAAGGAGTAGAATCATAT+GGG 0.494622 2:+65357288 None:intergenic
TTAACACTCACTCATCCATC+AGG 0.497586 2:+65357538 None:intergenic
ACGTTTGGCCCTGCGGCGGA+AGG 0.501742 2:+65357178 None:intergenic
GTTTATGTTTATGTAAGAGT+GGG 0.504230 2:+65357453 None:intergenic
GCTGCCAGTGTCCTCCTCAC+CGG 0.505609 2:-65357227 MsG0280010149.01.T01:CDS
TGTTTATGTAAGAGTGGGAT+GGG 0.505792 2:+65357458 None:intergenic
CAACAAGACTGTTGCGCAGA+GGG 0.507747 2:-65355776 MsG0280010149.01.T01:CDS
GAATCATATGGGATTTCAAT+GGG 0.507790 2:+65357299 None:intergenic
ACCTGTTCAAGCATTTCTCC+GGG 0.507909 2:-65356375 MsG0280010149.01.T01:CDS
GCAGCAATTTGGATGAAAGA+AGG 0.509670 2:+65357245 None:intergenic
GGTTTATGTTTATGTAAGAG+TGG 0.511024 2:+65357452 None:intergenic
TTTGTTCTGTGGAGAAAAGA+GGG 0.511734 2:+65357431 None:intergenic
TGGCCCTGCGGCGGAAGGAG+CGG 0.512848 2:+65357183 None:intergenic
AGAATCATATGGGATTTCAA+TGG 0.519315 2:+65357298 None:intergenic
ATGGCTGAAATTGAGAAAGA+AGG 0.525166 2:+65357401 None:intergenic
CTTCCGCTCCTTCCGCCGCA+GGG 0.525461 2:-65357186 MsG0280010149.01.T01:CDS
ATGTTTATGTAAGAGTGGGA+TGG 0.528182 2:+65357457 None:intergenic
CAAACTGGCTCAGATAAAAC+GGG 0.529253 2:-65355842 MsG0280010149.01.T01:intron
GAAGGAGCGGAAGAGGAGAA+CGG 0.530575 2:+65357196 None:intergenic
GGCCAAACGTCTCAAACAAA+CGG 0.532765 2:-65357165 MsG0280010149.01.T01:intron
CTTCGATCTCTTATCAATCA+GGG 0.536766 2:-65353283 MsG0280010149.01.T01:CDS
TCCATCTGTTGTGATTGTTG+TGG 0.537652 2:+65357331 None:intergenic
TTCGCCACCATCATCGAGGC+GGG 0.539823 2:-65356314 MsG0280010149.01.T01:CDS
TGAAATTGAGAAAGAAGGAG+TGG 0.539921 2:+65357406 None:intergenic
TGTCAAATAGTGACTATAGC+GGG 0.542066 2:-65355799 MsG0280010149.01.T01:CDS
CTCAGATAAAACGGGACGGA+AGG 0.546411 2:-65355834 MsG0280010149.01.T01:intron
CTGAGAGGGTGGAACACCAT+TGG 0.551101 2:+65357561 None:intergenic
TTCAGGAGAGAAGTCAGTAA+AGG 0.553365 2:-65356465 MsG0280010149.01.T01:CDS
TTTCTCCGGGCAATATCAGC+TGG 0.555143 2:-65356362 MsG0280010149.01.T01:CDS
ACCACAACAATCACAACAGA+TGG 0.556667 2:-65357332 MsG0280010149.01.T01:CDS
ACTCATCCATCAGGCTGAGA+GGG 0.557981 2:+65357547 None:intergenic
CGGAGATAGCACCGGTGAGG+AGG 0.558564 2:+65357216 None:intergenic
ATCACAACAGATGGAGGAGA+TGG 0.559223 2:-65357323 MsG0280010149.01.T01:CDS
TAACACCAGCTGATATTGCC+CGG 0.562430 2:+65356357 None:intergenic
TATGTAAGAGTGGGATGGGA+AGG 0.575929 2:+65357462 None:intergenic
TCGGTGGAGGAGAGAAGAGA+AGG 0.580334 2:+65357272 None:intergenic
CATCCATCAGGCTGAGAGGG+TGG 0.580550 2:+65357550 None:intergenic
AGCACTTGATTGATTACCAA+TGG 0.583039 2:-65357577 MsG0280010149.01.T01:five_prime_UTR
AAGAGATCGAAGCTACCTTA+CGG 0.583116 2:+65353294 None:intergenic
AGAAATGCTTGAACAGGTGA+AGG 0.583226 2:+65356380 None:intergenic
CACTCATCCATCAGGCTGAG+AGG 0.588941 2:+65357546 None:intergenic
TTACGGTGATTGTTATCTGG+CGG 0.589706 2:+65353311 None:intergenic
CAACATCATCATCATTCACA+TGG 0.592074 2:-65357367 MsG0280010149.01.T01:CDS
TGATGTTGAAAGAGAAGGAA+TGG 0.594255 2:+65357382 None:intergenic
GCTTCAATAGAGACTACTAA+AGG 0.596943 2:-65356407 MsG0280010149.01.T01:CDS
AATGCTTGAACAGGTGAAGG+TGG 0.599999 2:+65356383 None:intergenic
CAGCAATTTGGATGAAAGAA+GGG 0.606123 2:+65357246 None:intergenic
TGAGACGTTTGGCCCTGCGG+CGG 0.608364 2:+65357174 None:intergenic
GATGATGATGTTGAAAGAGA+AGG 0.609817 2:+65357377 None:intergenic
GTTTGAGACGTTTGGCCCTG+CGG 0.615148 2:+65357171 None:intergenic
CACACAGAACAGAAGTCCAC+AGG 0.616815 2:-65357625 MsG0280010149.01.T01:five_prime_UTR
GCCAGATAACAATCACCGTA+AGG 0.617221 2:-65353309 MsG0280010149.01.T01:CDS
TTATCCAAATAAATATCCTG+TGG 0.618345 2:+65357609 None:intergenic
CAGACCCGCCTCGATGATGG+TGG 0.620049 2:+65356310 None:intergenic
GAAATTGAGAAAGAAGGAGT+GGG 0.626589 2:+65357407 None:intergenic
TTGGATGAAAGAAGGGTCGT+CGG 0.628074 2:+65357253 None:intergenic
GAGGAGAACGGAGATAGCAC+CGG 0.630741 2:+65357208 None:intergenic
ACAACAATCACAACAGATGG+AGG 0.634223 2:-65357329 MsG0280010149.01.T01:CDS
TTCGATCTCTTATCAATCAG+GGG 0.640695 2:-65353282 MsG0280010149.01.T01:CDS
AAGAGTGGGATGGGAAGGTG+GGG 0.640872 2:+65357467 None:intergenic
CTGTGGACTTCTGTTCTGTG+TGG 0.645396 2:+65357626 None:intergenic
GATGAAAGAAGGGTCGTCGG+TGG 0.646943 2:+65357256 None:intergenic
TGACAGATTGCAGAATGTAA+CGG 0.647106 2:+65355743 None:intergenic
TACGGATAAAAGGACATGAG+AGG 0.652323 2:+65356246 None:intergenic
TTGTCAAATAGTGACTATAG+CGG 0.662157 2:-65355800 MsG0280010149.01.T01:CDS
AGCACCGGTGAGGAGGACAC+TGG 0.667703 2:+65357223 None:intergenic
GCAACAAGACTGTTGCGCAG+AGG 0.667929 2:-65355777 MsG0280010149.01.T01:CDS
GAACGGAGATAGCACCGGTG+AGG 0.671231 2:+65357213 None:intergenic
CAATCTGTCATTGACAACAC+CGG 0.672279 2:-65355730 MsG0280010149.01.T01:intron
GTTCGCCACCATCATCGAGG+CGG 0.686352 2:-65356315 MsG0280010149.01.T01:CDS
TAAGTTCGCCACCATCATCG+AGG 0.692160 2:-65356318 MsG0280010149.01.T01:CDS
TGGAGACTTTGAAAGCTATG+GGG 0.694173 2:-65356433 MsG0280010149.01.T01:CDS
CTGGCTCAGATAAAACGGGA+CGG 0.695644 2:-65355838 MsG0280010149.01.T01:intron
GGGGTGAGAAGAGAAGGTTG+TGG 0.774274 2:+65357486 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG + Chr2:65355035-65355054 None:intergenic 10.0%
!! ATAGTAAATTTGTATAATTA+TGG + Chr2:65356621-65356640 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + Chr2:65355036-65355055 None:intergenic 10.0%
!! AAATTGAATAAATAGTCATT+TGG + Chr2:65354000-65354019 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG + Chr2:65354970-65354989 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + Chr2:65355034-65355053 None:intergenic 15.0%
!! GTATTTAAATAATAGCTAAT+TGG + Chr2:65357214-65357233 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + Chr2:65354971-65354990 None:intergenic 15.0%
!!! TACAAAAAAGTAATACATTT+TGG + Chr2:65356826-65356845 None:intergenic 15.0%
!! AAAGTGGAATATATTGTATT+GGG + Chr2:65355011-65355030 None:intergenic 20.0%
!! AACAAATATTAGAGAAATAG+TGG - Chr2:65355571-65355590 MsG0280010149.01.T01:intron 20.0%
!! AGAAAGAGTTAGATATTAAA+TGG - Chr2:65356485-65356504 MsG0280010149.01.T01:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + Chr2:65354938-65354957 None:intergenic 20.0%
!! ATAATATAAATTGTGACACT+TGG + Chr2:65353908-65353927 None:intergenic 20.0%
!! ATAGCTCACTATATTTATTT+AGG - Chr2:65355870-65355889 MsG0280010149.01.T01:intron 20.0%
!! CGTGAATGAAAAAAAAAAAT+AGG + Chr2:65356785-65356804 None:intergenic 20.0%
!! GAAAGAGTTAGATATTAAAT+GGG - Chr2:65356486-65356505 MsG0280010149.01.T01:intron 20.0%
!! TGTCAATGATTATTTATTGT+TGG - Chr2:65357280-65357299 MsG0280010149.01.T01:CDS 20.0%
!! TTACTTAGCTTAATTACTAA+GGG - Chr2:65355271-65355290 MsG0280010149.01.T01:intron 20.0%
!!! AAAGAAAGTATGATGAAAAA+GGG + Chr2:65353778-65353797 None:intergenic 20.0%
!!! ATGATCAGTCTTTTTAATAT+AGG - Chr2:65354079-65354098 MsG0280010149.01.T01:intron 20.0%
!!! ATGTTAGACATTTTAAAAAC+TGG - Chr2:65357107-65357126 MsG0280010149.01.T01:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + Chr2:65354901-65354920 None:intergenic 20.0%
!!! TCATCTCTTGAAAATTTTAT+TGG - Chr2:65355248-65355267 MsG0280010149.01.T01:intron 20.0%
!!! TGAGTTTTTTTTTTTTTGTG+TGG - Chr2:65354406-65354425 MsG0280010149.01.T01:intron 20.0%
!!! TGATCAGTCTTTTTAATATA+GGG - Chr2:65354080-65354099 MsG0280010149.01.T01:intron 20.0%
!!! TTGTTTGTGTTAAAGTTTTA+GGG - Chr2:65354337-65354356 MsG0280010149.01.T01:intron 20.0%
!!! TTTGTTTGTGTTAAAGTTTT+AGG - Chr2:65354336-65354355 MsG0280010149.01.T01:intron 20.0%
! AAATGTAGGTATCAAAATTG+TGG - Chr2:65357152-65357171 MsG0280010149.01.T01:intron 25.0%
! AAGAAGTCTTCAAATATATC+TGG - Chr2:65356105-65356124 MsG0280010149.01.T01:intron 25.0%
! AATTGTGGATTTAGAAATGT+AGG - Chr2:65357138-65357157 MsG0280010149.01.T01:intron 25.0%
! ACCATAATCTAATGGTATAA+TGG - Chr2:65357563-65357582 MsG0280010149.01.T01:five_prime_UTR 25.0%
! ACCATTATACCATTAGATTA+TGG + Chr2:65357567-65357586 None:intergenic 25.0%
! AGAATGAGTAATTAAGCTAA+AGG + Chr2:65355467-65355486 None:intergenic 25.0%
! ATGGTTATGTGATATTGTTT+AGG - Chr2:65356888-65356907 MsG0280010149.01.T01:intron 25.0%
! ATTTATATTATGCTACACCA+AGG - Chr2:65353917-65353936 MsG0280010149.01.T01:intron 25.0%
! CAAACAAAAAAGAACAGATA+CGG + Chr2:65354686-65354705 None:intergenic 25.0%
! CCATTGGATATTAATTAATC+AGG - Chr2:65356377-65356396 MsG0280010149.01.T01:CDS 25.0%
! CCTGATTAATTAATATCCAA+TGG + Chr2:65356380-65356399 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + Chr2:65355012-65355031 None:intergenic 25.0%
! GAATGAGTAATTAAGCTAAA+GGG + Chr2:65355466-65355485 None:intergenic 25.0%
! GTTACTTAGCTTAATTACTA+AGG - Chr2:65355270-65355289 MsG0280010149.01.T01:intron 25.0%
! GTTTATGTTTATGTAAGAGT+GGG + Chr2:65353461-65353480 None:intergenic 25.0%
! TACTTAGCTTAATTACTAAG+GGG - Chr2:65355272-65355291 MsG0280010149.01.T01:intron 25.0%
! TTAATATCCAATGGTTGAAA+TGG + Chr2:65356371-65356390 None:intergenic 25.0%
! TTATCCAAATAAATATCCTG+TGG + Chr2:65353305-65353324 None:intergenic 25.0%
! TTGAATAAATAGTCATTTGG+TGG + Chr2:65353997-65354016 None:intergenic 25.0%
! TTGCAAACTTTAGATTATCT+TGG + Chr2:65356255-65356274 None:intergenic 25.0%
!! ATAGCTAATTGGCTTAAATA+CGG + Chr2:65357203-65357222 None:intergenic 25.0%
!! ATCATTTTGCAGTAACTTTT+TGG + Chr2:65355549-65355568 None:intergenic 25.0%
!! ATGTTAGTTTGAATCAGATA+AGG - Chr2:65354712-65354731 MsG0280010149.01.T01:intron 25.0%
!! GAAAGAAAGTATGATGAAAA+AGG + Chr2:65353779-65353798 None:intergenic 25.0%
!! GTACTCTTCTTATTTGTAAT+GGG - Chr2:65355217-65355236 MsG0280010149.01.T01:intron 25.0%
!! TTTTAAATAGACTCACATGA+TGG + Chr2:65356437-65356456 None:intergenic 25.0%
!! TTTTTGTAACCTAAGCATTT+GGG - Chr2:65356838-65356857 MsG0280010149.01.T01:intron 25.0%
!!! AAGTAATACATTTTGGAAAC+TGG + Chr2:65356819-65356838 None:intergenic 25.0%
!!! CATTTTGATCAAATATATCC+AGG + Chr2:65356175-65356194 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + Chr2:65354902-65354921 None:intergenic 25.0%
!!! TTTACTCATTTTAAAAGCCT+TGG + Chr2:65353937-65353956 None:intergenic 25.0%
!!! TTTTTTGTAACCTAAGCATT+TGG - Chr2:65356837-65356856 MsG0280010149.01.T01:intron 25.0%
AAAAGAAGAATGATGAACCA+TGG + Chr2:65355502-65355521 None:intergenic 30.0%
AAAAGACTGATCATTCGATT+TGG + Chr2:65354073-65354092 None:intergenic 30.0%
AAAGAACAGATACGGATAAA+AGG + Chr2:65354678-65354697 None:intergenic 30.0%
AAAGAAGAATGATGAACCAT+GGG + Chr2:65355501-65355520 None:intergenic 30.0%
AAGTCCACAGGATATTTATT+TGG - Chr2:65353298-65353317 MsG0280010149.01.T01:CDS 30.0%
AATTCATAATGCTGTTGCAT+AGG + Chr2:65354125-65354144 None:intergenic 30.0%
ACAACAACAACAACAATCAT+AGG + Chr2:65356063-65356082 None:intergenic 30.0%
ACTTAGCTTAATTACTAAGG+GGG - Chr2:65355273-65355292 MsG0280010149.01.T01:intron 30.0%
AGAATCATATGGGATTTCAA+TGG + Chr2:65353616-65353635 None:intergenic 30.0%
AGGTATCAAAATTGTGGATA+AGG - Chr2:65357158-65357177 MsG0280010149.01.T01:intron 30.0%
CACATAATTCGTGTAATCAA+GGG - Chr2:65355606-65355625 MsG0280010149.01.T01:intron 30.0%
CCATTTATACATTGGAACTA+AGG - Chr2:65356404-65356423 MsG0280010149.01.T01:CDS 30.0%
CCTTAGTTCCAATGTATAAA+TGG + Chr2:65356407-65356426 None:intergenic 30.0%
CTTCGATTTCAATTTGTCTT+AGG - Chr2:65354226-65354245 MsG0280010149.01.T01:intron 30.0%
GAAACTTGGTAGAAGAAATT+AGG - Chr2:65355828-65355847 MsG0280010149.01.T01:CDS 30.0%
GAATCATATGGGATTTCAAT+GGG + Chr2:65353615-65353634 None:intergenic 30.0%
GGTTTATGTTTATGTAAGAG+TGG + Chr2:65353462-65353481 None:intergenic 30.0%
GTATTATTACTACTACGAAC+CGG - Chr2:65355892-65355911 MsG0280010149.01.T01:intron 30.0%
GTTCAAACCAAAGACAAAAT+AGG - Chr2:65354025-65354044 MsG0280010149.01.T01:intron 30.0%
TAACTTACTATAGCCTATAC+CGG - Chr2:65357447-65357466 MsG0280010149.01.T01:CDS 30.0%
TAATCTGTGAAAAACCAAAC+TGG - Chr2:65355054-65355073 MsG0280010149.01.T01:intron 30.0%
TCACATAATTCGTGTAATCA+AGG - Chr2:65355605-65355624 MsG0280010149.01.T01:intron 30.0%
TCCTCATCATAAGAAATGTA+AGG - Chr2:65354266-65354285 MsG0280010149.01.T01:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + Chr2:65355027-65355046 None:intergenic 30.0%
TTACTTGCACCATAATCTAA+TGG - Chr2:65357555-65357574 MsG0280010149.01.T01:five_prime_UTR 30.0%
TTGTCAAATAGTGACTATAG+CGG - Chr2:65355111-65355130 MsG0280010149.01.T01:intron 30.0%
TTGTGATCCTTGATATATCA+AGG + Chr2:65354185-65354204 None:intergenic 30.0%
TTTCAATGCAATCTAATGAC+CGG + Chr2:65357469-65357488 None:intergenic 30.0%
! AAACTGGAGTATCAAAATTG+TGG - Chr2:65357123-65357142 MsG0280010149.01.T01:intron 30.0%
! ATTTTGCAGTAACTTTTTGG+AGG + Chr2:65355546-65355565 None:intergenic 30.0%
! CGTACTCTTCTTATTTGTAA+TGG - Chr2:65355216-65355235 MsG0280010149.01.T01:intron 30.0%
! TAATTATGGTTTTCCTACTG+TGG + Chr2:65356607-65356626 None:intergenic 30.0%
! TTGAAATGGCTCAGTTATTT+TGG + Chr2:65354924-65354943 None:intergenic 30.0%
! TTTTAATATAGGGCTGCATA+AGG - Chr2:65354090-65354109 MsG0280010149.01.T01:intron 30.0%
! TTTTGTAACCTAAGCATTTG+GGG - Chr2:65356839-65356858 MsG0280010149.01.T01:intron 30.0%
!! CTTTTATTTGAATGCATTCC+TGG - Chr2:65356537-65356556 MsG0280010149.01.T01:intron 30.0%
!! TAATACATTTTGGAAACTGG+AGG + Chr2:65356816-65356835 None:intergenic 30.0%
!! TGAAATGGCTCAGTTATTTT+GGG + Chr2:65354923-65354942 None:intergenic 30.0%
!!! ATTCTGAACTTTTTTTCCCA+TGG - Chr2:65355482-65355501 MsG0280010149.01.T01:intron 30.0%
!!! TGTTGTTGTTGTTGTTGTTT+TGG - Chr2:65356068-65356087 MsG0280010149.01.T01:intron 30.0%
AAATGAATCACCATGAGTTG+AGG - Chr2:65355767-65355786 MsG0280010149.01.T01:CDS 35.0%
AACCTCTTGTGTAAAAAGCA+GGG - Chr2:65355362-65355381 MsG0280010149.01.T01:intron 35.0%
AAGAAAAACCTCAGACAGTT+AGG - Chr2:65354760-65354779 MsG0280010149.01.T01:intron 35.0%
ACTGTGTACAATACACCAAA+TGG - Chr2:65355389-65355408 MsG0280010149.01.T01:intron 35.0%
AGAAAATGGGTCAGATATTC+CGG + Chr2:65354888-65354907 None:intergenic 35.0%
AGAAGAACATGAACAAAGAG+TGG - Chr2:65355798-65355817 MsG0280010149.01.T01:CDS 35.0%
AGAAGAATTCGGTACGTATA+GGG + Chr2:65355938-65355957 None:intergenic 35.0%
AGAGAAGGAGTAGAATCATA+TGG + Chr2:65353627-65353646 None:intergenic 35.0%
AGCACTTGATTGATTACCAA+TGG - Chr2:65353334-65353353 MsG0280010149.01.T01:intron 35.0%
AGTTCAGAGCTCAATACTAA+AGG + Chr2:65356338-65356357 None:intergenic 35.0%
ATAAACAATGAGACTGCTAG+AGG + Chr2:65356225-65356244 None:intergenic 35.0%
ATCAGAACATGCATGAAATG+TGG + Chr2:65353808-65353827 None:intergenic 35.0%
ATGGCTGAAATTGAGAAAGA+AGG + Chr2:65353513-65353532 None:intergenic 35.0%
ATGTTTATGTAAGAGTGGGA+TGG + Chr2:65353457-65353476 None:intergenic 35.0%
CAACATCATCATCATTCACA+TGG - Chr2:65353544-65353563 MsG0280010149.01.T01:intron 35.0%
CAGCAATTTGGATGAAAGAA+GGG + Chr2:65353668-65353687 None:intergenic 35.0%
CAGGCAATCCATTTATACAT+TGG - Chr2:65356396-65356415 MsG0280010149.01.T01:CDS 35.0%
CTAGCAGTCTCATTGTTTAT+TGG - Chr2:65356225-65356244 MsG0280010149.01.T01:CDS 35.0%
CTTCGATCTCTTATCAATCA+GGG - Chr2:65357628-65357647 MsG0280010149.01.T01:five_prime_UTR 35.0%
GAAATTGAGAAAGAAGGAGT+GGG + Chr2:65353507-65353526 None:intergenic 35.0%
GAGAAGGAGTAGAATCATAT+GGG + Chr2:65353626-65353645 None:intergenic 35.0%
GCAGTTTCCTTGATATATCA+AGG - Chr2:65354175-65354194 MsG0280010149.01.T01:intron 35.0%
GCCTTACATTTCTTATGATG+AGG + Chr2:65354270-65354289 None:intergenic 35.0%
GCTTCAATAGAGACTACTAA+AGG - Chr2:65354504-65354523 MsG0280010149.01.T01:intron 35.0%
GTTCAGAGCTCAATACTAAA+GGG + Chr2:65356337-65356356 None:intergenic 35.0%
TAAACAATGAGACTGCTAGA+GGG + Chr2:65356224-65356243 None:intergenic 35.0%
TCTGTACACATCTACATGAA+GGG - Chr2:65356714-65356733 MsG0280010149.01.T01:intron 35.0%
TGAAATTGAGAAAGAAGGAG+TGG + Chr2:65353508-65353527 None:intergenic 35.0%
TGACAGATTGCAGAATGTAA+CGG + Chr2:65355171-65355190 None:intergenic 35.0%
TGATGTTGAAAGAGAAGGAA+TGG + Chr2:65353532-65353551 None:intergenic 35.0%
TGTACAATACACCAAATGGT+GGG - Chr2:65355393-65355412 MsG0280010149.01.T01:intron 35.0%
TGTCAAATAGTGACTATAGC+GGG - Chr2:65355112-65355131 MsG0280010149.01.T01:intron 35.0%
TGTTTATGTAAGAGTGGGAT+GGG + Chr2:65353456-65353475 None:intergenic 35.0%
TTCAGAGCTCAATACTAAAG+GGG + Chr2:65356336-65356355 None:intergenic 35.0%
TTCATGCATGTTCTGATACT+AGG - Chr2:65353811-65353830 MsG0280010149.01.T01:intron 35.0%
TTCGATCTCTTATCAATCAG+GGG - Chr2:65357629-65357648 MsG0280010149.01.T01:five_prime_UTR 35.0%
TTTGAAGACTTCTTCCATGA+AGG + Chr2:65356099-65356118 None:intergenic 35.0%
TTTGATGCAAGACATTGTCT+AGG - Chr2:65356977-65356996 MsG0280010149.01.T01:intron 35.0%
TTTGTTCTGTGGAGAAAAGA+GGG + Chr2:65353483-65353502 None:intergenic 35.0%
! AATCGTCTGAAATTGTTTGC+CGG + Chr2:65354629-65354648 None:intergenic 35.0%
! ATTGGAGACTTTGAAAGCTA+TGG - Chr2:65354476-65354495 MsG0280010149.01.T01:intron 35.0%
! GATGATGATGTTGAAAGAGA+AGG + Chr2:65353537-65353556 None:intergenic 35.0%
! GGTATAATGGTATGCTTTTC+AGG - Chr2:65357576-65357595 MsG0280010149.01.T01:five_prime_UTR 35.0%
! TTGAATTTTCTACACAGTCC+AGG + Chr2:65356558-65356577 None:intergenic 35.0%
! TTGGAGACTTTGAAAGCTAT+GGG - Chr2:65354477-65354496 MsG0280010149.01.T01:intron 35.0%
! TTTTAGCAATTCAGGTCTTC+AGG - Chr2:65354429-65354448 MsG0280010149.01.T01:intron 35.0%
! TTTTGTTCTGTGGAGAAAAG+AGG + Chr2:65353484-65353503 None:intergenic 35.0%
!! AACTGTCTGAGGTTTTTCTT+TGG + Chr2:65354760-65354779 None:intergenic 35.0%
!! ATTGTTTTACGTTTTCCCTG+TGG + Chr2:65357312-65357331 None:intergenic 35.0%
!! TTACACAAGAGGTTGTTTCT+AGG + Chr2:65355356-65355375 None:intergenic 35.0%
!! TTGTTTTACGTTTTCCCTGT+GGG + Chr2:65357311-65357330 None:intergenic 35.0%
!!! CCTTTTTTTCAACCAATCAG+CGG + Chr2:65355725-65355744 None:intergenic 35.0%
!!! TTGTGTGGTTTTAGCAATTC+AGG - Chr2:65354421-65354440 MsG0280010149.01.T01:intron 35.0%
!!! TTGTTTTGGTATGTCCTTCA+TGG - Chr2:65356082-65356101 MsG0280010149.01.T01:intron 35.0%
AAATTCAGCCCCAAATGCAT+AGG - Chr2:65357076-65357095 MsG0280010149.01.T01:intron 40.0%
AAATTCAGCCCCAAATGCTT+AGG + Chr2:65356850-65356869 None:intergenic 40.0%
AACCGCGAATTATGTGACTA+TGG - Chr2:65356003-65356022 MsG0280010149.01.T01:intron 40.0%
AACCTCAGACAGTTAGGAAT+TGG - Chr2:65354766-65354785 MsG0280010149.01.T01:intron 40.0%
AAGAGATCGAAGCTACCTTA+CGG + Chr2:65357620-65357639 None:intergenic 40.0%
ACAACAATCACAACAGATGG+AGG - Chr2:65353582-65353601 MsG0280010149.01.T01:intron 40.0%
ACCACAACAATCACAACAGA+TGG - Chr2:65353579-65353598 MsG0280010149.01.T01:intron 40.0%
ACCGCGAATTATGTGACTAT+GGG - Chr2:65356004-65356023 MsG0280010149.01.T01:intron 40.0%
ACCTTACGGTGATTGTTATC+TGG + Chr2:65357606-65357625 None:intergenic 40.0%
AGAAATGCTTGAACAGGTGA+AGG + Chr2:65354534-65354553 None:intergenic 40.0%
ATCAAGGGAGAATTGCGAAT+TGG - Chr2:65355621-65355640 MsG0280010149.01.T01:intron 40.0%
CAACCTCTTGTGTAAAAAGC+AGG - Chr2:65355361-65355380 MsG0280010149.01.T01:intron 40.0%
CAATCTGTCATTGACAACAC+CGG - Chr2:65355181-65355200 MsG0280010149.01.T01:intron 40.0%
CAGTCTAATACTGCTGATGT+GGG + Chr2:65354156-65354175 None:intergenic 40.0%
CTCTGTACACATCTACATGA+AGG - Chr2:65356713-65356732 MsG0280010149.01.T01:intron 40.0%
CTGAAGTCCATTTCAACCAT+TGG - Chr2:65356361-65356380 MsG0280010149.01.T01:CDS 40.0%
CTGTACACATCTACATGAAG+GGG - Chr2:65356715-65356734 MsG0280010149.01.T01:intron 40.0%
CTGTTGTAATGCTCATCACA+AGG - Chr2:65356680-65356699 MsG0280010149.01.T01:intron 40.0%
CTTGTGATGAGCATTACAAC+AGG + Chr2:65356682-65356701 None:intergenic 40.0%
GAAAATGGGTCAGATATTCC+GGG + Chr2:65354887-65354906 None:intergenic 40.0%
GAAGAATTCGGTACGTATAG+GGG + Chr2:65355937-65355956 None:intergenic 40.0%
GAGAAGAATTCGGTACGTAT+AGG + Chr2:65355939-65355958 None:intergenic 40.0%
GAGTACGTGACATTAATGAC+CGG + Chr2:65355203-65355222 None:intergenic 40.0%
GCAGCAATTTGGATGAAAGA+AGG + Chr2:65353669-65353688 None:intergenic 40.0%
GCATGTTCTGATACTAGGTA+GGG - Chr2:65353816-65353835 MsG0280010149.01.T01:intron 40.0%
GCTTCGATCTCTTATCAATC+AGG - Chr2:65357627-65357646 MsG0280010149.01.T01:five_prime_UTR 40.0%
GGAGAGCGAATCATAGTTTA+AGG - Chr2:65354046-65354065 MsG0280010149.01.T01:intron 40.0%
GTGTACAATACACCAAATGG+TGG - Chr2:65355392-65355411 MsG0280010149.01.T01:intron 40.0%
GTTATGTCATGCTCATCACA+AGG - Chr2:65357390-65357409 MsG0280010149.01.T01:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG - Chr2:65355316-65355335 MsG0280010149.01.T01:intron 40.0%
TACGGATAAAAGGACATGAG+AGG + Chr2:65354668-65354687 None:intergenic 40.0%
TAGCATTAGTACACCACAGT+AGG - Chr2:65356591-65356610 MsG0280010149.01.T01:intron 40.0%
TCAGAGCTCAATACTAAAGG+GGG + Chr2:65356335-65356354 None:intergenic 40.0%
TCCATCTGTTGTGATTGTTG+TGG + Chr2:65353583-65353602 None:intergenic 40.0%
TGCAATCTAATGACCGGTAT+AGG + Chr2:65357463-65357482 None:intergenic 40.0%
TGCATGTTCTGATACTAGGT+AGG - Chr2:65353815-65353834 MsG0280010149.01.T01:intron 40.0%
TTAACACTCACTCATCCATC+AGG + Chr2:65353376-65353395 None:intergenic 40.0%
TTACGGTGATTGTTATCTGG+CGG + Chr2:65357603-65357622 None:intergenic 40.0%
TTCAGGAGAGAAGTCAGTAA+AGG - Chr2:65354446-65354465 MsG0280010149.01.T01:intron 40.0%
! AACCGTTTGTTTGAGACGTT+TGG + Chr2:65353751-65353770 None:intergenic 40.0%
! ATTTTCCCCACCTATGCATT+TGG + Chr2:65357089-65357108 None:intergenic 40.0%
! CAAACTGGCTCAGATAAAAC+GGG - Chr2:65355069-65355088 MsG0280010149.01.T01:intron 40.0%
! CCAAACTGGCTCAGATAAAA+CGG - Chr2:65355068-65355087 MsG0280010149.01.T01:intron 40.0%
! CCGCTGATTGGTTGAAAAAA+AGG - Chr2:65355722-65355741 MsG0280010149.01.T01:intron 40.0%
! GTCAGTAAAGGAAGAAGCAT+TGG - Chr2:65354458-65354477 MsG0280010149.01.T01:intron 40.0%
! TCGCTCTCCTATTTTGTCTT+TGG + Chr2:65354035-65354054 None:intergenic 40.0%
! TGGAGACTTTGAAAGCTATG+GGG - Chr2:65354478-65354497 MsG0280010149.01.T01:intron 40.0%
! TGTTTTACGTTTTCCCTGTG+GGG + Chr2:65357310-65357329 None:intergenic 40.0%
! TTTTCCCCACCTATGCATTT+GGG + Chr2:65357088-65357107 None:intergenic 40.0%
!! TGGTACATGAGTACCGAATT+CGG - Chr2:65355641-65355660 MsG0280010149.01.T01:intron 40.0%
AAAGCATGGTTACCGCTGAT+TGG - Chr2:65355710-65355729 MsG0280010149.01.T01:intron 45.0%
AACAGATCAAGCTCATTGCC+TGG - Chr2:65356154-65356173 MsG0280010149.01.T01:intron 45.0%
AATCAGCGGTAACCATGCTT+TGG + Chr2:65355711-65355730 None:intergenic 45.0%
AATGCTTGAACAGGTGAAGG+TGG + Chr2:65354531-65354550 None:intergenic 45.0%
AATTAAGCTAAAGGGCAGCC+CGG + Chr2:65355458-65355477 None:intergenic 45.0%
ACAAAGCTCCCACATACACA+GGG + Chr2:65355432-65355451 None:intergenic 45.0%
ACATAATTCGCGGTTCGATC+CGG + Chr2:65355998-65356017 None:intergenic 45.0%
ACATACACAGGGTCTGGAAA+GGG + Chr2:65355421-65355440 None:intergenic 45.0%
ACCAAGCAATTGAGCTCAAG+TGG - Chr2:65353961-65353980 MsG0280010149.01.T01:intron 45.0%
ACCACTTGAGCTCAATTGCT+TGG + Chr2:65353965-65353984 None:intergenic 45.0%
ACCTGTTCAAGCATTTCTCC+GGG - Chr2:65354536-65354555 MsG0280010149.01.T01:intron 45.0%
AGAGTGGAGAGTGAGAAACT+TGG - Chr2:65355814-65355833 MsG0280010149.01.T01:CDS 45.0%
ATCACAACAGATGGAGGAGA+TGG - Chr2:65353588-65353607 MsG0280010149.01.T01:intron 45.0%
ATGTCATGCTCATCACAAGG+TGG - Chr2:65357393-65357412 MsG0280010149.01.T01:CDS 45.0%
ATTTAGTACTACCTCCGTCC+CGG - Chr2:65354866-65354885 MsG0280010149.01.T01:intron 45.0%
CACCTGTTCAAGCATTTCTC+CGG - Chr2:65354535-65354554 MsG0280010149.01.T01:intron 45.0%
CATAGGAGCTGCAACTTTCT+TGG + Chr2:65356046-65356065 None:intergenic 45.0%
CTCCAATTCCTAACTGTCTG+AGG + Chr2:65354771-65354790 None:intergenic 45.0%
GATGCAAGACATTGTCTAGG+TGG - Chr2:65356980-65356999 MsG0280010149.01.T01:intron 45.0%
GCAGTCTAATACTGCTGATG+TGG + Chr2:65354157-65354176 None:intergenic 45.0%
GCCAGATAACAATCACCGTA+AGG - Chr2:65357602-65357621 MsG0280010149.01.T01:five_prime_UTR 45.0%
GCCCATAGTCACATAATTCG+CGG + Chr2:65356008-65356027 None:intergenic 45.0%
GGCCAAACGTCTCAAACAAA+CGG - Chr2:65353746-65353765 MsG0280010149.01.T01:intron 45.0%
TAACACCAGCTGATATTGCC+CGG + Chr2:65354557-65354576 None:intergenic 45.0%
TAACCATGCTTTGGTACGCT+TGG + Chr2:65355702-65355721 None:intergenic 45.0%
TAATTACTAAGGGGGAGCCT+TGG - Chr2:65355281-65355300 MsG0280010149.01.T01:intron 45.0%
TACAAAGCTCCCACATACAC+AGG + Chr2:65355433-65355452 None:intergenic 45.0%
TACGCGACAGGAGAAGAATT+CGG + Chr2:65355949-65355968 None:intergenic 45.0%
TACGGTGATTGTTATCTGGC+GGG + Chr2:65357602-65357621 None:intergenic 45.0%
TATGTAAGAGTGGGATGGGA+AGG + Chr2:65353452-65353471 None:intergenic 45.0%
TATTGTTGGAGTTCCCCACA+GGG - Chr2:65357294-65357313 MsG0280010149.01.T01:CDS 45.0%
TCACAAGGTGGCATATGTCT+TGG - Chr2:65357405-65357424 MsG0280010149.01.T01:CDS 45.0%
TTATTGTTGGAGTTCCCCAC+AGG - Chr2:65357293-65357312 MsG0280010149.01.T01:CDS 45.0%
TTGGATGAAAGAAGGGTCGT+CGG + Chr2:65353661-65353680 None:intergenic 45.0%
TTTCCAGACCCTGTGTATGT+GGG - Chr2:65355421-65355440 MsG0280010149.01.T01:intron 45.0%
TTTCCCCACCTATGCATTTG+GGG + Chr2:65357087-65357106 None:intergenic 45.0%
! AGTACCGAATTCGGGTACTT+CGG - Chr2:65355650-65355669 MsG0280010149.01.T01:intron 45.0%
! CCGTTTTATCTGAGCCAGTT+TGG + Chr2:65355071-65355090 None:intergenic 45.0%
! CGTATAGGGGTATACAGCTT+CGG + Chr2:65355924-65355943 None:intergenic 45.0%
! CTTCTGTTCTGTGTGGCTTT+TGG + Chr2:65353281-65353300 None:intergenic 45.0%
! GGGGCTGAATTTTCACGATT+TGG + Chr2:65357068-65357087 None:intergenic 45.0%
! TATGTGGGAGCTTTGTACAC+CGG - Chr2:65355436-65355455 MsG0280010149.01.T01:intron 45.0%
! TGTTCTGTGTGGCTTTTGGT+GGG + Chr2:65353277-65353296 None:intergenic 45.0%
!! GGTACATGAGTACCGAATTC+GGG - Chr2:65355642-65355661 MsG0280010149.01.T01:intron 45.0%
!!! AAGGAGTGGGTTTTGTTCTG+TGG + Chr2:65353494-65353513 None:intergenic 45.0%
!!! GCTGAATTTTGAGATGTGGC+TGG - Chr2:65356861-65356880 MsG0280010149.01.T01:intron 45.0%
!!! TGCCCTGCTTTTTACACAAG+AGG + Chr2:65355367-65355386 None:intergenic 45.0%
!!! TGGGGCTGAATTTTGAGATG+TGG - Chr2:65356857-65356876 MsG0280010149.01.T01:intron 45.0%
!!! TTAAAAATATGTTTTTTTTA+AGG - Chr2:65353856-65353875 MsG0280010149.01.T01:intron 5.0%
ACAACTTTACCGTTGCGCCA+AGG + Chr2:65355301-65355320 None:intergenic 50.0%
ACTCATCCATCAGGCTGAGA+GGG + Chr2:65353367-65353386 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG + Chr2:65354883-65354902 None:intergenic 50.0%
ATTCGGGTACTTCGGCGTAT+TGG - Chr2:65355658-65355677 MsG0280010149.01.T01:intron 50.0%
CAACAAGACTGTTGCGCAGA+GGG - Chr2:65355135-65355154 MsG0280010149.01.T01:intron 50.0%
CACACAGAACAGAAGTCCAC+AGG - Chr2:65353286-65353305 MsG0280010149.01.T01:CDS 50.0%
CACATACACAGGGTCTGGAA+AGG + Chr2:65355422-65355441 None:intergenic 50.0%
CATACACAGGGTCTGGAAAG+GGG + Chr2:65355420-65355439 None:intergenic 50.0%
CTCACTCAGTCCTCAACTCA+TGG + Chr2:65355780-65355799 None:intergenic 50.0%
CTCAGATAAAACGGGACGGA+AGG - Chr2:65355077-65355096 MsG0280010149.01.T01:intron 50.0%
CTGGCTCAGATAAAACGGGA+CGG - Chr2:65355073-65355092 MsG0280010149.01.T01:intron 50.0%
CTGTGGACTTCTGTTCTGTG+TGG + Chr2:65353288-65353307 None:intergenic 50.0%
CTTTCCAGACCCTGTGTATG+TGG - Chr2:65355420-65355439 MsG0280010149.01.T01:intron 50.0%
GAACCAAGCGTACCAAAGCA+TGG - Chr2:65355696-65355715 MsG0280010149.01.T01:intron 50.0%
TAAGAGTGGGATGGGAAGGT+GGG + Chr2:65353448-65353467 None:intergenic 50.0%
TAAGTTCGCCACCATCATCG+AGG - Chr2:65354593-65354612 MsG0280010149.01.T01:intron 50.0%
TATACAGCTTCGGTACGCTC+CGG + Chr2:65355914-65355933 None:intergenic 50.0%
TCAGCCCCAAATGCATAGGT+GGG - Chr2:65357080-65357099 MsG0280010149.01.T01:intron 50.0%
TTCAGCCCCAAATGCATAGG+TGG - Chr2:65357079-65357098 MsG0280010149.01.T01:intron 50.0%
TTGAGATGTGGCTGGTGAGA+TGG - Chr2:65356869-65356888 MsG0280010149.01.T01:intron 50.0%
TTTCTCCGGGCAATATCAGC+TGG - Chr2:65354549-65354568 MsG0280010149.01.T01:intron 50.0%
! ATGTGGGAGCTTTGTACACC+GGG - Chr2:65355437-65355456 MsG0280010149.01.T01:intron 50.0%
! CTGTTCTGTGTGGCTTTTGG+TGG + Chr2:65353278-65353297 None:intergenic 50.0%
! TACGCCGAAGTACCCGAATT+CGG + Chr2:65355657-65355676 None:intergenic 50.0%
AAGAGTGGGATGGGAAGGTG+GGG + Chr2:65353447-65353466 None:intergenic 55.0%
CACTCATCCATCAGGCTGAG+AGG + Chr2:65353368-65353387 None:intergenic 55.0%
CAGCCCCAAATGCATAGGTG+GGG - Chr2:65357081-65357100 MsG0280010149.01.T01:intron 55.0%
CTGAGAGGGTGGAACACCAT+TGG + Chr2:65353353-65353372 None:intergenic 55.0%
GAAGGAGCGGAAGAGGAGAA+CGG + Chr2:65353718-65353737 None:intergenic 55.0%
GAAGGTGGGGTGAGAAGAGA+AGG + Chr2:65353434-65353453 None:intergenic 55.0%
GAGGAGAACGGAGATAGCAC+CGG + Chr2:65353706-65353725 None:intergenic 55.0%
GATGAAAGAAGGGTCGTCGG+TGG + Chr2:65353658-65353677 None:intergenic 55.0%
GCAACAAGACTGTTGCGCAG+AGG - Chr2:65355134-65355153 MsG0280010149.01.T01:intron 55.0%
GCCCGGAGAAATGCTTGAAC+AGG + Chr2:65354540-65354559 None:intergenic 55.0%
GGAGGACACTGGCAGCAATT+TGG + Chr2:65353680-65353699 None:intergenic 55.0%
GGGGTCGTGAATGAAAGACG+CGG + Chr2:65356316-65356335 None:intergenic 55.0%
GGGGTGAGAAGAGAAGGTTG+TGG + Chr2:65353428-65353447 None:intergenic 55.0%
GGGTCGTGAATGAAAGACGC+GGG + Chr2:65356315-65356334 None:intergenic 55.0%
GTAAGAGTGGGATGGGAAGG+TGG + Chr2:65353449-65353468 None:intergenic 55.0%
TCGGTGGAGGAGAGAAGAGA+AGG + Chr2:65353642-65353661 None:intergenic 55.0%
TGGAAAGGGGTCCCACCATT+TGG + Chr2:65355407-65355426 None:intergenic 55.0%
! CTTTGGTACGCTTGGTTCGC+TGG + Chr2:65355694-65355713 None:intergenic 55.0%
! GTTTGAGACGTTTGGCCCTG+CGG + Chr2:65353743-65353762 None:intergenic 55.0%
CATCCATCAGGCTGAGAGGG+TGG + Chr2:65353364-65353383 None:intergenic 60.0%
GAAAGAAGGGTCGTCGGTGG+AGG + Chr2:65353655-65353674 None:intergenic 60.0%
GCTCCCACATACACAGGGTC+TGG + Chr2:65355427-65355446 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + Chr2:65354880-65354899 None:intergenic 60.0%
GTTCCACCCTCTCAGCCTGA+TGG - Chr2:65353358-65353377 MsG0280010149.01.T01:intron 60.0%
GTTCGATCCGGTACGCGGTA+CGG + Chr2:65355986-65356005 None:intergenic 60.0%
GTTCGCCACCATCATCGAGG+CGG - Chr2:65354596-65354615 MsG0280010149.01.T01:intron 60.0%
TTCGATCCGGTACGCGGTAC+GGG + Chr2:65355985-65356004 None:intergenic 60.0%
TTCGCCACCATCATCGAGGC+GGG - Chr2:65354597-65354616 MsG0280010149.01.T01:intron 60.0%
!! GAACGGAGATAGCACCGGTG+AGG + Chr2:65353701-65353720 None:intergenic 60.0%
AAGGGGGAGCCTTGGCGCAA+CGG - Chr2:65355289-65355308 MsG0280010149.01.T01:intron 65.0%
GCTCAGACCCGCCTCGATGA+TGG + Chr2:65354607-65354626 None:intergenic 65.0%
GCTGCCAGTGTCCTCCTCAC+CGG - Chr2:65353684-65353703 MsG0280010149.01.T01:intron 65.0%
TCATCGAGGCGGGTCTGAGC+CGG - Chr2:65354607-65354626 MsG0280010149.01.T01:intron 65.0%
TCCGGTACGCGGTACGGGTA+CGG + Chr2:65355980-65355999 None:intergenic 65.0%
TCGCGGTTCGATCCGGTACG+CGG + Chr2:65355991-65356010 None:intergenic 65.0%
TGAGACGTTTGGCCCTGCGG+CGG + Chr2:65353740-65353759 None:intergenic 65.0%
! CAGACCCGCCTCGATGATGG+TGG + Chr2:65354604-65354623 None:intergenic 65.0%
!! AGCACCGGTGAGGAGGACAC+TGG + Chr2:65353691-65353710 None:intergenic 65.0%
!! CGGAGATAGCACCGGTGAGG+AGG + Chr2:65353698-65353717 None:intergenic 65.0%
ACGGGTTCGCGGTACGCGAC+AGG + Chr2:65355961-65355980 None:intergenic 70.0%
ACGTTTGGCCCTGCGGCGGA+AGG + Chr2:65353736-65353755 None:intergenic 70.0%
CCCGTACCCGTACCGCGTAC+CGG - Chr2:65355976-65355995 MsG0280010149.01.T01:intron 70.0%
CCGGTACGCGGTACGGGTAC+GGG + Chr2:65355979-65355998 None:intergenic 70.0%
CTTCCGCTCCTTCCGCCGCA+GGG - Chr2:65353725-65353744 MsG0280010149.01.T01:intron 70.0%
GCGGTACGGGTACGGGTTCG+CGG + Chr2:65355972-65355991 None:intergenic 70.0%
TCTTCCGCTCCTTCCGCCGC+AGG - Chr2:65353724-65353743 MsG0280010149.01.T01:intron 70.0%
TGCGGCGGAAGGAGCGGAAG+AGG + Chr2:65353725-65353744 None:intergenic 70.0%
TGGCCCTGCGGCGGAAGGAG+CGG + Chr2:65353731-65353750 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 65353259 65357674 65353259 ID=MsG0280010149.01;Name=MsG0280010149.01
Chr2 mRNA 65353259 65357674 65353259 ID=MsG0280010149.01.T01;Parent=MsG0280010149.01;Name=MsG0280010149.01.T01;_AED=0.48;_eAED=0.60;_QI=149|0.33|0.25|1|0|0|4|0|278
Chr2 exon 65353259 65353335 65353259 ID=MsG0280010149.01.T01:exon:14157;Parent=MsG0280010149.01.T01
Chr2 exon 65355731 65355851 65355731 ID=MsG0280010149.01.T01:exon:14156;Parent=MsG0280010149.01.T01
Chr2 exon 65356220 65356498 65356220 ID=MsG0280010149.01.T01:exon:14155;Parent=MsG0280010149.01.T01
Chr2 exon 65357166 65357674 65357166 ID=MsG0280010149.01.T01:exon:14154;Parent=MsG0280010149.01.T01
Chr2 five_prime_UTR 65357526 65357674 65357526 ID=MsG0280010149.01.T01:five_prime_utr;Parent=MsG0280010149.01.T01
Chr2 CDS 65357166 65357525 65357166 ID=MsG0280010149.01.T01:cds;Parent=MsG0280010149.01.T01
Chr2 CDS 65356220 65356498 65356220 ID=MsG0280010149.01.T01:cds;Parent=MsG0280010149.01.T01
Chr2 CDS 65355731 65355851 65355731 ID=MsG0280010149.01.T01:cds;Parent=MsG0280010149.01.T01
Chr2 CDS 65353259 65353335 65353259 ID=MsG0280010149.01.T01:cds;Parent=MsG0280010149.01.T01
Gene Sequence

>MsG0280010149.01.T01

ATGTTGCAGTCTCAGTGCCACAACCTTCTCTTCTCACCCCACCTTCCCATCCCACTCTTACATAAACATAAACCCTCTTTTCTCCACAGAACAAAACCCACTCCTTCTTTCTCAATTTCAGCCATTCCTTCTCTTTCAACATCATCATCATTCACATGGCTCGCTGATATCACCACAACAATCACAACAGATGGAGGAGATGGACCCATTGAAATCCCATATGATTCTACTCCTTCTCTTCTCTCCTCCACCGACGACCCTTCTTTCATCCAAATTGCTGCCAGTGTCCTCCTCACCGGTGCTATCTCCGTTCTCCTCTTCCGCTCCTTCCGCCGCAGGGCCAAACGTCTCAAACAAACGCAATTCAGGTCTTCAGGAGAGAAGTCAGTAAAGGAAGAAGCATTGGAGACTTTGAAAGCTATGGGGTCTGCTTCAATAGAGACTACTAAAGGTCCACCTTCACCTGTTCAAGCATTTCTCCGGGCAATATCAGCTGGTGTTATTTCTCTTATTTTGTATAAGTTCGCCACCATCATCGAGGCGGGTCTGAGCCGGCAAACAATTTCAGACGATTTCTCTGTATGTCTTCTCCTCTCATGTCCTTTTATCCGTATCTGTTCTTTTTTGTTTGCACATTATATAAAACGGGACGGAAGGAGTACAAAATATTGTCAAATAGTGACTATAGCGGGCAACAAGACTGTTGCGCAGAGGGATTTGAACAACCGTTACATTCTGCAATCTGTCATTGACAACACCGGCCCGCCAGATAACAATCACCGTAAGGTAGCTTCGATCTCTTATCAATCAGGGGTGATGCTATTCTTTTATTTTTAA

Protein sequence

>MsG0280010149.01.T01

MLQSQCHNLLFSPHLPIPLLHKHKPSFLHRTKPTPSFSISAIPSLSTSSSFTWLADITTTITTDGGDGPIEIPYDSTPSLLSSTDDPSFIQIAASVLLTGAISVLLFRSFRRRAKRLKQTQFRSSGEKSVKEEALETLKAMGSASIETTKGPPSPVQAFLRAISAGVISLILYKFATIIEAGLSRQTISDDFSVCLLLSCPFIRICSFLFAHYIKRDGRSTKYCQIVTIAGNKTVAQRDLNNRYILQSVIDNTGPPDNNHRKVASISYQSGVMLFFYF*