AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048952.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048952.01.T01 MTR_8g005040 83.716 436 55 3 3 433 4 428 0.0 726
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048952.01.T01 AT5G01010 60.739 433 167 2 1 431 1 432 0.0 531
MsG0080048952.01.T01 AT5G01010 55.485 474 167 3 1 431 1 473 7.55e-180 511
MsG0080048952.01.T01 AT5G01010 55.485 474 167 3 1 431 1 473 7.55e-180 511
MsG0080048952.01.T01 AT5G01010 60.238 420 164 2 1 418 1 419 3.00e-179 507
MsG0080048952.01.T01 AT5G01010 54.219 474 166 4 1 431 1 466 1.22e-171 489

Find 19 sgRNAs with CRISPR-Local

Find 1190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATAAAATTGTCAATTGT+AGG 0.349727 contig561end:+29070 MsG0080048952.01.T01:exon
ACTGTAGGTGCTACGGTATA+AGG 0.397024 contig561end:+28823 MsG0080048952.01.T01:intron
AATGGCACTGGCTCTGCAAC+AGG 0.413130 contig561end:-28860 None:intergenic
AAAATTACTAGTACATCAAT+AGG 0.416004 contig561end:-28930 None:intergenic
GGAAGGGATAGGAGGTGTAA+AGG 0.439158 contig561end:+29024 MsG0080048952.01.T01:exon
AATTGAACACATCTCGATCT+TGG 0.449135 contig561end:-28989 None:intergenic
TGTTCAATTGATTTCTATGA+AGG 0.457670 contig561end:+29003 MsG0080048952.01.T01:exon
GTATAAAATTGTCAATTGTA+GGG 0.468884 contig561end:+29071 MsG0080048952.01.T01:exon
TTGCATCAGTCGAATGGCAC+TGG 0.479589 contig561end:-28872 None:intergenic
CAATTGATTTCTATGAAGGA+AGG 0.504987 contig561end:+29007 MsG0080048952.01.T01:exon
GGCATGAGTAATTAGAACTT+CGG 0.505469 contig561end:-28968 None:intergenic
ATAGGAGGTGTAAAGGAGCT+TGG 0.523367 contig561end:+29031 MsG0080048952.01.T01:exon
TCTATGAAGGAAGGGATAGG+AGG 0.544149 contig561end:+29016 MsG0080048952.01.T01:exon
AGAAGGCCTCTGCATTATGC+AGG 0.549229 contig561end:+28904 MsG0080048952.01.T01:exon
ATTTCTATGAAGGAAGGGAT+AGG 0.559182 contig561end:+29013 MsG0080048952.01.T01:exon
AATTGATTTCTATGAAGGAA+GGG 0.572013 contig561end:+29008 MsG0080048952.01.T01:exon
TATAATGACTGTAGGTGCTA+CGG 0.577224 contig561end:+28816 MsG0080048952.01.T01:intron
GGCACTGGCTCTGCAACAGG+AGG 0.638970 contig561end:-28857 None:intergenic
AGGTATCCTGCATAATGCAG+AGG 0.680243 contig561end:-28910 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAATTTATATTATA+TGG - contig561end:16878-16897 None:intergenic 0.0%
!! AAAGAATAATATATGATTAA+TGG + contig561end:15074-15093 MsG0080048952.01.T01:intron 10.0%
!! ATATATTGATGAATTTAAAT+CGG + contig561end:28566-28585 MsG0080048952.01.T01:intron 10.0%
!! TATATATATATATAGAAGAA+AGG - contig561end:23708-23727 None:intergenic 10.0%
!! TCTTATACAAATTAAAATTA+AGG + contig561end:16835-16854 MsG0080048952.01.T01:intron 10.0%
!! TGAATTTCTTAAAAAAAAAA+TGG - contig561end:20418-20437 None:intergenic 10.0%
!!! AAATACATCTAATAATTTTA+AGG - contig561end:17779-17798 None:intergenic 10.0%
!!! AATACATCTAATAATTTTAA+GGG - contig561end:17778-17797 None:intergenic 10.0%
!!! ACATAAATTTTAAATAATAG+AGG - contig561end:9892-9911 None:intergenic 10.0%
!!! ATAAAAAATATTTTGCATTT+TGG - contig561end:11373-11392 None:intergenic 10.0%
!!! ATAATAAATGCATTATTTTA+TGG + contig561end:9517-9536 MsG0080048952.01.T01:intron 10.0%
!!! CTTATTTTTCTTTTTTATTA+GGG + contig561end:24384-24403 MsG0080048952.01.T01:intron 10.0%
!!! GTTGAAATTTTTTAATTTTT+TGG - contig561end:17516-17535 None:intergenic 10.0%
!!! TACCTAAAATAATATTTTTA+AGG + contig561end:20516-20535 MsG0080048952.01.T01:intron 10.0%
!!! TACTTTTCTTTTTAAAATTA+AGG - contig561end:24310-24329 None:intergenic 10.0%
!!! TGAAAATTTAAAATAACTAA+TGG - contig561end:17166-17185 None:intergenic 10.0%
!!! TGAAATTTTTTAATTTTTTG+GGG - contig561end:17514-17533 None:intergenic 10.0%
!!! TTAAAAACAAATTTGTTTAA+TGG + contig561end:18096-18115 MsG0080048952.01.T01:intron 10.0%
!!! TTAGTTCTTTTATAAAATTT+GGG + contig561end:25917-25936 MsG0080048952.01.T01:intron 10.0%
!!! TTATATATTTGTTATATTGT+TGG - contig561end:18034-18053 None:intergenic 10.0%
!!! TTATTCAATGAATAAAATTT+TGG - contig561end:27107-27126 None:intergenic 10.0%
!!! TTCCTTAAAAATATTATTTT+AGG - contig561end:20521-20540 None:intergenic 10.0%
!!! TTGTTTTTACTAAATTTATT+CGG + contig561end:16971-16990 MsG0080048952.01.T01:intron 10.0%
!!! TTTTTAAAATGTTATATTGT+TGG - contig561end:18083-18102 None:intergenic 10.0%
!!! TTTTTAATTTCTTTATCTAA+CGG + contig561end:14897-14916 MsG0080048952.01.T01:intron 10.0%
!!! TTTTTTGTAATGTAATTTTA+GGG + contig561end:28373-28392 MsG0080048952.01.T01:intron 10.0%
!!! TTTTTTTATTCATTTTTGTT+AGG - contig561end:20791-20810 None:intergenic 10.0%
!!! TTTTTTTGTAATGTAATTTT+AGG + contig561end:28372-28391 MsG0080048952.01.T01:intron 10.0%
!! AAAAAAAATGACTTATATAC+AGG + contig561end:17957-17976 MsG0080048952.01.T01:intron 15.0%
!! AAAAAAATGACTTATATACA+GGG + contig561end:17958-17977 MsG0080048952.01.T01:intron 15.0%
!! AAAACAATTAAATTCACAAA+AGG - contig561end:11334-11353 None:intergenic 15.0%
!! AAAATGTTGGTATATTTATA+GGG + contig561end:17735-17754 MsG0080048952.01.T01:intron 15.0%
!! AATACAATATATATAACCAA+GGG + contig561end:13159-13178 MsG0080048952.01.T01:intron 15.0%
!! AATTGAATCTAATAAAAGTT+CGG + contig561end:14608-14627 MsG0080048952.01.T01:intron 15.0%
!! AATTGTGATAATAAGTTAAA+AGG + contig561end:11015-11034 MsG0080048952.01.T01:intron 15.0%
!! ACAAAGAGAATAAAAAAAAA+AGG + contig561end:21001-21020 MsG0080048952.01.T01:intron 15.0%
!! ATACATATGAAGAAAAATTT+GGG + contig561end:17670-17689 MsG0080048952.01.T01:intron 15.0%
!! ATCTATATTTGAATAAATGA+TGG + contig561end:20565-20584 MsG0080048952.01.T01:intron 15.0%
!! ATGAAATTTATTAGATTGAT+AGG - contig561end:16386-16405 None:intergenic 15.0%
!! ATTTATAAATTTATTCCCAA+TGG - contig561end:17033-17052 None:intergenic 15.0%
!! CAAATAAATATCAAAATCAT+TGG - contig561end:24195-24214 None:intergenic 15.0%
!! CATTAATTGATTATATATAG+CGG + contig561end:20701-20720 MsG0080048952.01.T01:intron 15.0%
!! CTAAACAAATATAAACATTA+TGG + contig561end:15617-15636 MsG0080048952.01.T01:intron 15.0%
!! GTAATATATAAGATTAAACA+CGG + contig561end:11560-11579 MsG0080048952.01.T01:intron 15.0%
!! TAAAAAATAGTGAACAAAAA+TGG - contig561end:17461-17480 None:intergenic 15.0%
!! TAAACCATCAATTTAAATAT+GGG + contig561end:10988-11007 MsG0080048952.01.T01:intron 15.0%
!! TAACATGATTATGATTATTT+GGG - contig561end:10294-10313 None:intergenic 15.0%
!! TAGAAGATTTAGAAATTTAT+AGG + contig561end:26973-26992 MsG0080048952.01.T01:intron 15.0%
!! TATAACAACATAGATAAAAT+TGG - contig561end:26542-26561 None:intergenic 15.0%
!! TATACATATGAAGAAAAATT+TGG + contig561end:17669-17688 MsG0080048952.01.T01:intron 15.0%
!! TATATTGATGAATTTAAATC+GGG + contig561end:28567-28586 MsG0080048952.01.T01:intron 15.0%
!! TTATATTGAAAAAAAACCTT+GGG - contig561end:24909-24928 None:intergenic 15.0%
!! TTTATAAAGATGAATTTACA+AGG - contig561end:17110-17129 None:intergenic 15.0%
!!! AAGATTTTATTTTTCTTCAT+TGG - contig561end:24790-24809 None:intergenic 15.0%
!!! ACGTAAATTTTAAATAATAG+AGG - contig561end:9593-9612 None:intergenic 15.0%
!!! ACTTTAATTTTTTGAAACTA+AGG - contig561end:17009-17028 None:intergenic 15.0%
!!! AGGTTTTTCTTTATTTATTA+TGG - contig561end:19737-19756 None:intergenic 15.0%
!!! CTGAAAATTCTAATTTTATA+TGG - contig561end:22721-22740 None:intergenic 15.0%
!!! CTTTTATGATTTTTTTCATA+GGG - contig561end:19834-19853 None:intergenic 15.0%
!!! GATCTTTTTATGTATTTTTA+TGG - contig561end:22852-22871 None:intergenic 15.0%
!!! GCTTATTTTTCTTTTTTATT+AGG + contig561end:24383-24402 MsG0080048952.01.T01:intron 15.0%
!!! GTCAATTTTTTTTTAACAAT+AGG - contig561end:10422-10441 None:intergenic 15.0%
!!! GTCTTTTTCTTATAAATTAA+GGG + contig561end:17336-17355 MsG0080048952.01.T01:intron 15.0%
!!! GTTAGTTCTTTTATAAAATT+TGG + contig561end:25916-25935 MsG0080048952.01.T01:intron 15.0%
!!! GTTATATTTTTGATTCTAAT+AGG + contig561end:16935-16954 MsG0080048952.01.T01:intron 15.0%
!!! GTTATCTTTTATTTTTGTTT+TGG + contig561end:25291-25310 MsG0080048952.01.T01:intron 15.0%
!!! TCAATTTGATAACTAAATAA+GGG - contig561end:10706-10725 None:intergenic 15.0%
!!! TGTCTTTTTCTTATAAATTA+AGG + contig561end:17335-17354 MsG0080048952.01.T01:intron 15.0%
!!! TGTTTTTACTAAATTTATTC+GGG + contig561end:16972-16991 MsG0080048952.01.T01:intron 15.0%
!!! TTGATTCATTGATTTTTTTT+CGG - contig561end:19660-19679 None:intergenic 15.0%
!!! TTTTAACAATAGGAATATTT+GGG - contig561end:10412-10431 None:intergenic 15.0%
!!! TTTTATGATTTTTTTCATAG+GGG - contig561end:19833-19852 None:intergenic 15.0%
!!! TTTTATTAGATTCAATTAAC+TGG - contig561end:14605-14624 None:intergenic 15.0%
!!! TTTTTAACAATAGGAATATT+TGG - contig561end:10413-10432 None:intergenic 15.0%
!!! TTTTTCTTTTTTATTAGGAA+TGG + contig561end:24581-24600 MsG0080048952.01.T01:intron 15.0%
!!! TTTTTGTAATGTAATTTTAG+GGG + contig561end:28374-28393 MsG0080048952.01.T01:intron 15.0%
!!! TTTTTTCTTTTTGTGAATAT+TGG + contig561end:25726-25745 MsG0080048952.01.T01:intron 15.0%
!!! TTTTTTTTTTTTCTGTAAGT+AGG + contig561end:16493-16512 MsG0080048952.01.T01:intron 15.0%
!! AAAAACTCAAAACAAAACAA+TGG + contig561end:22777-22796 MsG0080048952.01.T01:intron 20.0%
!! AAAAAGAAGTTTAGTATAGA+AGG - contig561end:27966-27985 None:intergenic 20.0%
!! AAAACAATAGATTGAGAAAA+AGG - contig561end:11088-11107 None:intergenic 20.0%
!! AAAATTACTAGTACATCAAT+AGG - contig561end:28933-28952 None:intergenic 20.0%
!! AAACTGTAAACTAAACTTAT+GGG - contig561end:20339-20358 None:intergenic 20.0%
!! AAGAAATAGAAAAAAATGGA+AGG - contig561end:9360-9379 None:intergenic 20.0%
!! AAGAAATAGATGATATTAAG+AGG + contig561end:26409-26428 MsG0080048952.01.T01:intron 20.0%
!! AAGAGATTGAAGATAAAAAT+GGG - contig561end:28131-28150 None:intergenic 20.0%
!! AAGTAAAATATGTACAGATT+AGG + contig561end:15751-15770 MsG0080048952.01.T01:intron 20.0%
!! AATTCAGAAACAATTAAACA+TGG + contig561end:15571-15590 MsG0080048952.01.T01:intron 20.0%
!! AATTTATCATAAGTATCACA+TGG - contig561end:23512-23531 None:intergenic 20.0%
!! AATTTATTAGATTGATAGGA+AGG - contig561end:16382-16401 None:intergenic 20.0%
!! ACAAGATGTATACAATTAAT+GGG + contig561end:9961-9980 MsG0080048952.01.T01:intron 20.0%
!! ACATTAAATCTAATGAAGAA+TGG - contig561end:22016-22035 None:intergenic 20.0%
!! AGAAATAGAAAAAAATGGAA+GGG - contig561end:9359-9378 None:intergenic 20.0%
!! AGAAATAGATGATATTAAGA+GGG + contig561end:26410-26429 MsG0080048952.01.T01:intron 20.0%
!! AGGATAAAAAAAATGCATTT+CGG - contig561end:11314-11333 None:intergenic 20.0%
!! AGTAAAATACGGAAATTAAA+AGG + contig561end:19435-19454 MsG0080048952.01.T01:intron 20.0%
!! AGTTTGGACTTTAAATATTT+AGG - contig561end:17074-17093 None:intergenic 20.0%
!! ATAATCGGCAAAATTAATTA+TGG - contig561end:20389-20408 None:intergenic 20.0%
!! ATAGAAGAAACACATATAAT+AGG - contig561end:28630-28649 None:intergenic 20.0%
!! ATATACCTAGAAGTAAAATA+CGG + contig561end:19424-19443 MsG0080048952.01.T01:intron 20.0%
!! ATCCTAATAATAATACCATT+TGG - contig561end:9461-9480 None:intergenic 20.0%
!! ATTATGTTTGATCATTCATA+TGG + contig561end:12270-12289 MsG0080048952.01.T01:intron 20.0%
!! ATTGAAATTAGGTTTAGAAA+AGG + contig561end:14484-14503 MsG0080048952.01.T01:intron 20.0%
!! ATTTAAAAGAATGACAACTT+TGG - contig561end:20007-20026 None:intergenic 20.0%
!! ATTTATCATAAGTATCACAT+GGG - contig561end:23511-23530 None:intergenic 20.0%
!! CAAAAAATTAAAGTTCCATT+GGG + contig561end:17015-17034 MsG0080048952.01.T01:intron 20.0%
!! CAAAATGTTGGTATATTTAT+AGG + contig561end:17734-17753 MsG0080048952.01.T01:intron 20.0%
!! CAGAAATTGAAATTGAAATT+AGG + contig561end:14473-14492 MsG0080048952.01.T01:intron 20.0%
!! CATTACTCTTAAAATAAACA+TGG - contig561end:9622-9641 None:intergenic 20.0%
!! CGCTATATATAATCAATTAA+TGG - contig561end:20703-20722 None:intergenic 20.0%
!! CTAAACCATCAATTTAAATA+TGG + contig561end:10987-11006 MsG0080048952.01.T01:intron 20.0%
!! GAAAGAAAATAAAGTTGTAT+TGG - contig561end:17257-17276 None:intergenic 20.0%
!! GAATACAATATATATAACCA+AGG + contig561end:13158-13177 MsG0080048952.01.T01:intron 20.0%
!! GAATGATAAATTAATGCTTA+TGG - contig561end:26593-26612 None:intergenic 20.0%
!! GACAATATCAAATAATTCAA+CGG - contig561end:26931-26950 None:intergenic 20.0%
!! GTAAAAAAATACGTCATAAT+TGG + contig561end:11582-11601 MsG0080048952.01.T01:intron 20.0%
!! GTAACATGATTATGATTATT+TGG - contig561end:10295-10314 None:intergenic 20.0%
!! GTGTGTTTAAGAAAATATTA+GGG + contig561end:14981-15000 MsG0080048952.01.T01:intron 20.0%
!! GTTATATTGAAAAAAAACCT+TGG - contig561end:24910-24929 None:intergenic 20.0%
!! TAAAAACTTCAAAATTTCGT+GGG - contig561end:23034-23053 None:intergenic 20.0%
!! TAAACTGTAAACTAAACTTA+TGG - contig561end:20340-20359 None:intergenic 20.0%
!! TAAGAGATTGAAGATAAAAA+TGG - contig561end:28132-28151 None:intergenic 20.0%
!! TAATGATTATTGAGAAATGA+TGG + contig561end:20625-20644 MsG0080048952.01.T01:intron 20.0%
!! TAGATTGTTGAAGTAAAAAA+TGG - contig561end:21389-21408 None:intergenic 20.0%
!! TATATAAGTCTCAATGAAAT+TGG - contig561end:26721-26740 None:intergenic 20.0%
!! TATGGTAATTAGAATGTATT+TGG + contig561end:23353-23372 MsG0080048952.01.T01:intron 20.0%
!! TCAAAAAATTAAAGTTCCAT+TGG + contig561end:17014-17033 MsG0080048952.01.T01:intron 20.0%
!! TCAACATATTCACTAATAAT+GGG - contig561end:25096-25115 None:intergenic 20.0%
!! TCAATAATCATTAAGGAATT+CGG - contig561end:20618-20637 None:intergenic 20.0%
!! TCATTTCTCAATAATCATTA+AGG - contig561end:20625-20644 None:intergenic 20.0%
!! TGATTTATTGTTAATCAGAT+TGG - contig561end:19234-19253 None:intergenic 20.0%
!! TGTGTGTTTAAGAAAATATT+AGG + contig561end:14980-14999 MsG0080048952.01.T01:intron 20.0%
!! TGTGTTTAAGAAAATATTAG+GGG + contig561end:14982-15001 MsG0080048952.01.T01:intron 20.0%
!! TTAAAAACTTCAAAATTTCG+TGG - contig561end:23035-23054 None:intergenic 20.0%
!! TTCATTTATTGTGCAATTAT+AGG + contig561end:10246-10265 MsG0080048952.01.T01:intron 20.0%
!! TTGAAATTAGGTTTAGAAAA+GGG + contig561end:14485-14504 MsG0080048952.01.T01:intron 20.0%
!! TTGCAAGAAATAGAAAAAAA+TGG - contig561end:9364-9383 None:intergenic 20.0%
!! TTTGTAATCATAATTATGTC+TGG + contig561end:16421-16440 MsG0080048952.01.T01:intron 20.0%
!! TTTGTTTATTGTTAGGATAT+TGG + contig561end:27983-28002 MsG0080048952.01.T01:intron 20.0%
!!! AAAAAATGGTACTGAATAAT+CGG - contig561end:20404-20423 None:intergenic 20.0%
!!! AAGTGTAGATTTGTTAATTT+GGG - contig561end:15442-15461 None:intergenic 20.0%
!!! AAGTTGTCATTCTTTTAAAT+AGG + contig561end:20007-20026 MsG0080048952.01.T01:intron 20.0%
!!! AATAAAACTCTCCTAATTTT+GGG - contig561end:9304-9323 None:intergenic 20.0%
!!! AATTGAGTTGTAAATTGTAA+TGG + contig561end:14563-14582 MsG0080048952.01.T01:intron 20.0%
!!! AATTTTGAAGTTTTTAAACC+AGG + contig561end:23038-23057 MsG0080048952.01.T01:intron 20.0%
!!! ACATTCAACTTTTTTTAGAA+AGG + contig561end:28447-28466 MsG0080048952.01.T01:CDS 20.0%
!!! ACTTCTTTTTGTTTATTGTT+AGG + contig561end:27976-27995 MsG0080048952.01.T01:intron 20.0%
!!! AGGTTTAATTTTTCTTTGAT+TGG - contig561end:10938-10957 None:intergenic 20.0%
!!! AGTAATCTTTACTTTTGATA+TGG - contig561end:13468-13487 None:intergenic 20.0%
!!! AGTGTTTAGTTTAAAACTAA+AGG - contig561end:10678-10697 None:intergenic 20.0%
!!! AGTTGTCATTCTTTTAAATA+GGG + contig561end:20008-20027 MsG0080048952.01.T01:intron 20.0%
!!! ATAACTTCCTAATTTTGAAT+TGG + contig561end:27123-27142 MsG0080048952.01.T01:intron 20.0%
!!! ATAAGGTTGTTTTACATTTT+TGG - contig561end:20084-20103 None:intergenic 20.0%
!!! ATACAAATATGCTGATTAAT+TGG + contig561end:28539-28558 MsG0080048952.01.T01:intron 20.0%
!!! ATATTAATTTGTCAGAAAAG+GGG + contig561end:25526-25545 MsG0080048952.01.T01:intron 20.0%
!!! ATCAAAGTTTTGTTTTGTAT+TGG + contig561end:15799-15818 MsG0080048952.01.T01:intron 20.0%
!!! ATTCAATTTTCCATTATTCT+TGG + contig561end:21543-21562 MsG0080048952.01.T01:CDS 20.0%
!!! ATTGTTTTGTTTTGAGTTTT+TGG - contig561end:22778-22797 None:intergenic 20.0%
!!! ATTTTGAAGTTTTTAAACCA+GGG + contig561end:23039-23058 MsG0080048952.01.T01:intron 20.0%
!!! ATTTTTATCTTCAATCTCTT+AGG + contig561end:28131-28150 MsG0080048952.01.T01:intron 20.0%
!!! CAAAAATACTTTTCCAAAAA+AGG - contig561end:24444-24463 None:intergenic 20.0%
!!! CAATTGACAATTTTATACAA+AGG - contig561end:29069-29088 None:intergenic 20.0%
!!! CATATTAATTTGTCAGAAAA+GGG + contig561end:25525-25544 MsG0080048952.01.T01:intron 20.0%
!!! GATACATTTTACATAGAAAT+AGG - contig561end:21948-21967 None:intergenic 20.0%
!!! GCTTTTATGATTTTTTTCAT+AGG - contig561end:19835-19854 None:intergenic 20.0%
!!! GGAATGTTGAATTTATTTTA+TGG + contig561end:10891-10910 MsG0080048952.01.T01:intron 20.0%
!!! GTCAATTTGATAACTAAATA+AGG - contig561end:10707-10726 None:intergenic 20.0%
!!! GTGTTTAGTTTAAAACTAAA+GGG - contig561end:10677-10696 None:intergenic 20.0%
!!! GTTGATTTTATTGTTACTTA+AGG - contig561end:12048-12067 None:intergenic 20.0%
!!! TAAGGTACAAATTAGTTTAT+GGG - contig561end:14237-14256 None:intergenic 20.0%
!!! TAAGTGTAGATTTGTTAATT+TGG - contig561end:15443-15462 None:intergenic 20.0%
!!! TAATAAAACTCTCCTAATTT+TGG - contig561end:9305-9324 None:intergenic 20.0%
!!! TACAAATATGCTGATTAATT+GGG + contig561end:28540-28559 MsG0080048952.01.T01:intron 20.0%
!!! TATGATTGATTTTGGTTTTT+GGG - contig561end:14185-14204 None:intergenic 20.0%
!!! TATTCTGAAACATGTTTATT+TGG - contig561end:15491-15510 None:intergenic 20.0%
!!! TCATAGTAGTTTTAAAATCA+GGG + contig561end:22322-22341 MsG0080048952.01.T01:intron 20.0%
!!! TGGTTTTTATGCAAAATTTA+TGG + contig561end:25746-25765 MsG0080048952.01.T01:intron 20.0%
!!! TGTTATTTAAGAAAACCTTA+CGG - contig561end:10646-10665 None:intergenic 20.0%
!!! TGTTTAGTTTAAAACTAAAG+GGG - contig561end:10676-10695 None:intergenic 20.0%
!!! TTAAGGGTTAAATATGTTTT+TGG - contig561end:17762-17781 None:intergenic 20.0%
!!! TTATCCATTATTTAGTTTCA+AGG - contig561end:22442-22461 None:intergenic 20.0%
!!! TTATGTTGATTTTTTTGACT+TGG - contig561end:11908-11927 None:intergenic 20.0%
!!! TTCAATTTTCCATTATTCTT+GGG + contig561end:21544-21563 MsG0080048952.01.T01:CDS 20.0%
!!! TTCTTTTATAAAATTTGGGT+TGG + contig561end:25921-25940 MsG0080048952.01.T01:intron 20.0%
!!! TTGCATTTTGGATAAAAAAA+AGG - contig561end:11361-11380 None:intergenic 20.0%
!!! TTGTTTTGAGTTTTGTTTTT+GGG - contig561end:14208-14227 None:intergenic 20.0%
!!! TTTATGATAGAGCATTATTT+CGG - contig561end:12904-12923 None:intergenic 20.0%
!!! TTTATGATTTTTTTCATAGG+GGG - contig561end:19832-19851 None:intergenic 20.0%
!!! TTTATGGTTAGAAGATTTTA+GGG + contig561end:25211-25230 MsG0080048952.01.T01:intron 20.0%
!!! TTTCTTTTTTATTAGGGAAT+GGG + contig561end:24390-24409 MsG0080048952.01.T01:intron 20.0%
!!! TTTGTTTGATTTTTGTTTCT+GGG - contig561end:14156-14175 None:intergenic 20.0%
!!! TTTGTTTTGAGTTTTGTTTT+TGG - contig561end:14209-14228 None:intergenic 20.0%
!!! TTTTACTTCAACAATCTAAT+TGG + contig561end:21391-21410 MsG0080048952.01.T01:CDS 20.0%
!!! TTTTATTAAGGCATTAGTAT+TGG - contig561end:15514-15533 None:intergenic 20.0%
!!! TTTTATTCATTTTTGTTAGG+TGG - contig561end:20788-20807 None:intergenic 20.0%
!!! TTTTCTTTTTTATTAGGGAA+TGG + contig561end:24389-24408 MsG0080048952.01.T01:intron 20.0%
!!! TTTTGTTTGATTTTTGTTTC+TGG - contig561end:14157-14176 None:intergenic 20.0%
!!! TTTTGTTTTAAAAGCTTGTT+TGG + contig561end:11754-11773 MsG0080048952.01.T01:intron 20.0%
! AAAAAATGGCAAAACAAACA+TGG - contig561end:28216-28235 None:intergenic 25.0%
! AAAAATGGCAAAACAAACAT+GGG - contig561end:28215-28234 None:intergenic 25.0%
! AAAAGGATGAATTTGAATAG+TGG - contig561end:27472-27491 None:intergenic 25.0%
! AAAATGTATCTTGTCCTTTA+TGG + contig561end:18387-18406 MsG0080048952.01.T01:intron 25.0%
! AAACCTCATTAAGAAAATTG+AGG + contig561end:19340-19359 MsG0080048952.01.T01:intron 25.0%
! AAAGATACCAAGATTTATAG+AGG + contig561end:19468-19487 MsG0080048952.01.T01:intron 25.0%
! AAAGGATTCTAAATCTATGA+AGG - contig561end:18744-18763 None:intergenic 25.0%
! AAATTTCAATTCTTTCGAAG+GGG + contig561end:20188-20207 MsG0080048952.01.T01:intron 25.0%
! AACAAAACTAAATTAGTTGC+AGG + contig561end:22463-22482 MsG0080048952.01.T01:intron 25.0%
! AACCAAATTAGAGTACAATA+AGG - contig561end:28070-28089 None:intergenic 25.0%
! AACCTCATTAAGAAAATTGA+GGG + contig561end:19341-19360 MsG0080048952.01.T01:intron 25.0%
! AAGAAATCCAATGTTGTTAT+AGG - contig561end:13779-13798 None:intergenic 25.0%
! AAGAGAATGAAAATGGAAAA+TGG - contig561end:21442-21461 None:intergenic 25.0%
! AATAAACTCACTACTGATAT+AGG - contig561end:19685-19704 None:intergenic 25.0%
! AATACGGAAATTAAAAGGTA+AGG + contig561end:19440-19459 MsG0080048952.01.T01:intron 25.0%
! AATCTAATAAAAGTTCGGTT+CGG + contig561end:14613-14632 MsG0080048952.01.T01:intron 25.0%
! AATGAACACAAGATATATGA+AGG + contig561end:19265-19284 MsG0080048952.01.T01:intron 25.0%
! ACTCTTAAAATAAACATGGA+TGG - contig561end:9618-9637 None:intergenic 25.0%
! AGACACAAAATACAATGAAA+AGG + contig561end:12995-13014 MsG0080048952.01.T01:intron 25.0%
! AGGTATTTAGGAAAATAGTT+TGG - contig561end:17090-17109 None:intergenic 25.0%
! AGTAAACCATCTTCAAATAA+CGG + contig561end:14638-14657 MsG0080048952.01.T01:intron 25.0%
! AGTTGTAAATTGTAATGGTT+CGG + contig561end:14568-14587 MsG0080048952.01.T01:intron 25.0%
! ATAAGATTGATGAAAACATG+TGG + contig561end:21338-21357 MsG0080048952.01.T01:intron 25.0%
! ATAATGATGTGACATAAACA+CGG - contig561end:9921-9940 None:intergenic 25.0%
! ATACACACATATACCTATTT+GGG - contig561end:18266-18285 None:intergenic 25.0%
! ATACGAAATATGTGAATTGA+AGG + contig561end:16570-16589 MsG0080048952.01.T01:intron 25.0%
! ATACGGAAATTAAAAGGTAA+GGG + contig561end:19441-19460 MsG0080048952.01.T01:intron 25.0%
! ATCATATTTCCCTTATGTTA+GGG - contig561end:19893-19912 None:intergenic 25.0%
! ATGGAAAATTGAATATTGTC+AGG - contig561end:21537-21556 None:intergenic 25.0%
! ATGTACATGCATAAAAGTAA+GGG + contig561end:10603-10622 MsG0080048952.01.T01:intron 25.0%
! ATTAGTATGTAACTAGTTGT+AGG + contig561end:22156-22175 MsG0080048952.01.T01:intron 25.0%
! ATTAGTCAATCTCGATAATT+AGG - contig561end:20964-20983 None:intergenic 25.0%
! ATTATGTAGATAATGCATCT+AGG + contig561end:23305-23324 MsG0080048952.01.T01:intron 25.0%
! ATTATTCATTTGCAGTTTAG+AGG - contig561end:15781-15800 None:intergenic 25.0%
! ATTCAAAGAGAAAGTGAATT+TGG - contig561end:12643-12662 None:intergenic 25.0%
! ATTCTTCCTTTCATTATCAT+GGG + contig561end:23866-23885 MsG0080048952.01.T01:CDS 25.0%
! ATTTGCCATATAAAAAGATG+TGG - contig561end:20441-20460 None:intergenic 25.0%
! CAAATTCAATATTGTTCAAG+AGG - contig561end:22051-22070 None:intergenic 25.0%
! CAAGATGTATACAATTAATG+GGG + contig561end:9962-9981 MsG0080048952.01.T01:intron 25.0%
! CAATTCACATATTTCGTATT+AGG - contig561end:16569-16588 None:intergenic 25.0%
! CACAAGATGTATACAATTAA+TGG + contig561end:9960-9979 MsG0080048952.01.T01:intron 25.0%
! CAGACTAAGTTTATATTACA+AGG - contig561end:22538-22557 None:intergenic 25.0%
! CATACTTGCATAAGTTAATA+GGG + contig561end:12112-12131 MsG0080048952.01.T01:intron 25.0%
! CCAATAAATTTGATTACCAA+AGG + contig561end:13892-13911 MsG0080048952.01.T01:intron 25.0%
! CTAAACATGAATGCAAAAAA+TGG - contig561end:22680-22699 None:intergenic 25.0%
! CTCAACATATTCACTAATAA+TGG - contig561end:25097-25116 None:intergenic 25.0%
! CTCTATCATAAACCATATAT+CGG + contig561end:12912-12931 MsG0080048952.01.T01:intron 25.0%
! CTCTTAAAATAAACATGGAT+GGG - contig561end:9617-9636 None:intergenic 25.0%
! CTTATATAATGTAAGATCCA+TGG + contig561end:26733-26752 MsG0080048952.01.T01:intron 25.0%
! GAAAAAATGAGGTCAAAAAT+AGG - contig561end:22622-22641 None:intergenic 25.0%
! GAAACCCATATTTAAATTGA+TGG - contig561end:10995-11014 None:intergenic 25.0%
! GAAATAGAAAAAAATGGAAG+GGG - contig561end:9358-9377 None:intergenic 25.0%
! GAAATAGATGATATTAAGAG+GGG + contig561end:26411-26430 MsG0080048952.01.T01:intron 25.0%
! GAAATTTCAATTCTTTCGAA+GGG + contig561end:20187-20206 MsG0080048952.01.T01:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + contig561end:26487-26506 MsG0080048952.01.T01:intron 25.0%
! GAATGCAATATTTGAATAAC+AGG + contig561end:22495-22514 MsG0080048952.01.T01:intron 25.0%
! GAGGAATGATAGATATAAAT+TGG - contig561end:20473-20492 None:intergenic 25.0%
! GATCAATTATAATAGACGTA+CGG + contig561end:24986-25005 MsG0080048952.01.T01:intron 25.0%
! GATTGACTAAAACAAAATGT+TGG + contig561end:17722-17741 MsG0080048952.01.T01:intron 25.0%
! GGAAAATAACTTACAAACAA+TGG + contig561end:15095-15114 MsG0080048952.01.T01:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG + contig561end:26491-26510 MsG0080048952.01.T01:intron 25.0%
! TAACCATGCAAACAAAATTA+TGG - contig561end:22991-23010 None:intergenic 25.0%
! TACAACTAGTTACATACTAA+TGG - contig561end:22157-22176 None:intergenic 25.0%
! TAGTTATTGCAAGAATTTAC+AGG - contig561end:23116-23135 None:intergenic 25.0%
! TATACACACATATACCTATT+TGG - contig561end:18267-18286 None:intergenic 25.0%
! TATCATATTATAGAAAGTCG+TGG + contig561end:27035-27054 MsG0080048952.01.T01:intron 25.0%
! TATGATGATCTTTGAATATC+AGG + contig561end:27798-27817 MsG0080048952.01.T01:intron 25.0%
! TATGTACATGCATAAAAGTA+AGG + contig561end:10602-10621 MsG0080048952.01.T01:intron 25.0%
! TATTTAGGAGGGATTATAAT+AGG - contig561end:17059-17078 None:intergenic 25.0%
! TCATACTTGCATAAGTTAAT+AGG + contig561end:12111-12130 MsG0080048952.01.T01:intron 25.0%
! TCATTAACTAAACTCAACAT+TGG + contig561end:13358-13377 MsG0080048952.01.T01:intron 25.0%
! TCCAAAGAAAACTATTACAA+TGG + contig561end:12145-12164 MsG0080048952.01.T01:intron 25.0%
! TCGAAAGAATTGAAATTTCA+AGG - contig561end:20186-20205 None:intergenic 25.0%
! TCTAGATTATGCATACAATA+AGG - contig561end:27666-27685 None:intergenic 25.0%
! TCTCTCAAATCAATCTAAAA+GGG + contig561end:13831-13850 MsG0080048952.01.T01:intron 25.0%
! TCTGTTAAAGAGAATGAAAA+TGG - contig561end:21449-21468 None:intergenic 25.0%
! TCTTTCATTAAACAAGCTAA+GGG - contig561end:13140-13159 None:intergenic 25.0%
! TGAAACTTATAATACAACAG+TGG - contig561end:10830-10849 None:intergenic 25.0%
! TGAAATTTCAATTCTTTCGA+AGG + contig561end:20186-20205 MsG0080048952.01.T01:intron 25.0%
! TGAATTGTAGAGTATAAGAA+GGG + contig561end:13612-13631 MsG0080048952.01.T01:intron 25.0%
! TGCCAAATGGTATTATTATT+AGG + contig561end:9456-9475 MsG0080048952.01.T01:intron 25.0%
! TGGACTTTAAATATTTAGGA+GGG - contig561end:17070-17089 None:intergenic 25.0%
! TGTATTACTAATAGTCATTC+TGG - contig561end:16294-16313 None:intergenic 25.0%
! TGTTATTGTATAATGACTGT+AGG + contig561end:28808-28827 MsG0080048952.01.T01:intron 25.0%
! TTAATGAAACAGATACAATG+AGG - contig561end:20492-20511 None:intergenic 25.0%
! TTAGGATATTGGATTTAGTT+TGG + contig561end:27994-28013 MsG0080048952.01.T01:intron 25.0%
! TTAGTATAGAAGGATATCTT+AGG - contig561end:27956-27975 None:intergenic 25.0%
! TTAGTATGTAACTAGTTGTA+GGG + contig561end:22157-22176 MsG0080048952.01.T01:intron 25.0%
! TTAGTCAATCTCGATAATTA+GGG - contig561end:20963-20982 None:intergenic 25.0%
! TTCAGGATAAGTTATGTTTA+TGG + contig561end:25195-25214 MsG0080048952.01.T01:intron 25.0%
! TTCCTTATTGTACTCTAATT+TGG + contig561end:28065-28084 MsG0080048952.01.T01:intron 25.0%
! TTCTTTCATTAAACAAGCTA+AGG - contig561end:13141-13160 None:intergenic 25.0%
! TTGGACTTTAAATATTTAGG+AGG - contig561end:17071-17090 None:intergenic 25.0%
! TTTACTTAATCATAAGCATC+AGG + contig561end:13250-13269 MsG0080048952.01.T01:intron 25.0%
! TTTGATCATTCATATGGTAT+TGG + contig561end:12276-12295 MsG0080048952.01.T01:intron 25.0%
! TTTGGAAGAAAAAAAAAGGA+AGG - contig561end:9393-9412 None:intergenic 25.0%
!! AAATGAATGTCATATTTTCC+AGG - contig561end:11794-11813 None:intergenic 25.0%
!! AATTGATTTCTATGAAGGAA+GGG + contig561end:29008-29027 MsG0080048952.01.T01:exon 25.0%
!! AATTTCCGTATTTTACTTCT+AGG - contig561end:19432-19451 None:intergenic 25.0%
!! AATTTTCTCACAATCAAAGT+TGG - contig561end:19310-19329 None:intergenic 25.0%
!! ATAAAACTCTCCTAATTTTG+GGG - contig561end:9303-9322 None:intergenic 25.0%
!! ATCTTCTCCTTGTATATTTT+TGG + contig561end:24737-24756 MsG0080048952.01.T01:intron 25.0%
!! ATGATAATGAAAGGAAGAAT+CGG - contig561end:23866-23885 None:intergenic 25.0%
!! ATGTTTTCATCAATCTTATG+CGG - contig561end:21337-21356 None:intergenic 25.0%
!! ATTCACCACATCTTTTTATA+TGG + contig561end:20433-20452 MsG0080048952.01.T01:intron 25.0%
!! ATTTGATAACTAAATAAGGG+AGG - contig561end:10703-10722 None:intergenic 25.0%
!! CAATAAAAGCTTAAAGCTTT+TGG + contig561end:18879-18898 MsG0080048952.01.T01:intron 25.0%
!! CAGATTTTTCTATCAACTAA+TGG - contig561end:11689-11708 None:intergenic 25.0%
!! CAGCTCAAAATTTGATTTAT+AGG - contig561end:22812-22831 None:intergenic 25.0%
!! CATAAACTAATTTGTACCTT+AGG + contig561end:14236-14255 MsG0080048952.01.T01:intron 25.0%
!! CATATTTTACTTTGTCTCAT+TGG - contig561end:15743-15762 None:intergenic 25.0%
!! CATTACTAAGATAACTTGTA+TGG - contig561end:12752-12771 None:intergenic 25.0%
!! CCTTTGGTAATCAAATTTAT+TGG - contig561end:13895-13914 None:intergenic 25.0%
!! CTAAGGTACAAATTAGTTTA+TGG - contig561end:14238-14257 None:intergenic 25.0%
!! CTGTTCTCATTCTTTTATTA+AGG - contig561end:15526-15545 None:intergenic 25.0%
!! GAAAATTTTCTCAGTCTATA+GGG + contig561end:10353-10372 MsG0080048952.01.T01:intron 25.0%
!! GATATATTGAAGGAATCTTT+TGG + contig561end:18560-18579 MsG0080048952.01.T01:intron 25.0%
!! GATGAATTTACAAGGTATTT+AGG - contig561end:17102-17121 None:intergenic 25.0%
!! GTTGTCATTCTTTTAAATAG+GGG + contig561end:20009-20028 MsG0080048952.01.T01:intron 25.0%
!! GTTTAGTTTAAAACTAAAGG+GGG - contig561end:10675-10694 None:intergenic 25.0%
!! GTTTATGGTTAGAAGATTTT+AGG + contig561end:25210-25229 MsG0080048952.01.T01:intron 25.0%
!! TAATGGAGTTTTCATCTATT+AGG - contig561end:22140-22159 None:intergenic 25.0%
!! TACTTTTCCAAAAAAAGTGA+AGG - contig561end:24621-24640 None:intergenic 25.0%
!! TAGAATTTTCAGACAAAAGA+TGG + contig561end:22729-22748 MsG0080048952.01.T01:intron 25.0%
!! TATTCAAATGAACGGTTTTA+GGG - contig561end:24124-24143 None:intergenic 25.0%
!! TATTCAAATTCATCCTTTTC+AGG + contig561end:27473-27492 MsG0080048952.01.T01:intron 25.0%
!! TCTTTTCTCTATCTTTTCAT+TGG + contig561end:9681-9700 MsG0080048952.01.T01:intron 25.0%
!! TGAAAATTTTCTCAGTCTAT+AGG + contig561end:10352-10371 MsG0080048952.01.T01:intron 25.0%
!! TGTTCAATTGATTTCTATGA+AGG + contig561end:29003-29022 MsG0080048952.01.T01:exon 25.0%
!! TTATGGTTAGAAGATTTTAG+GGG + contig561end:25212-25231 MsG0080048952.01.T01:intron 25.0%
!! TTATTCAAATGAACGGTTTT+AGG - contig561end:24125-24144 None:intergenic 25.0%
!! TTGTAATAGTTTTCTTTGGA+AGG - contig561end:12145-12164 None:intergenic 25.0%
!! TTGTCATTCTTTTAAATAGG+GGG + contig561end:20010-20029 MsG0080048952.01.T01:intron 25.0%
!! TTTCTTCTATTGTTACGTTT+TGG + contig561end:28640-28659 MsG0080048952.01.T01:intron 25.0%
!! TTTTCATTGGTCAAAAACAA+TGG + contig561end:9694-9713 MsG0080048952.01.T01:intron 25.0%
!!! AATTTTAATATGGTTCGGTT+CGG + contig561end:14694-14713 MsG0080048952.01.T01:intron 25.0%
!!! AGATTGTTTAGTTTTGTGAT+TGG - contig561end:19207-19226 None:intergenic 25.0%
!!! ATTCATAATTAATTTGTCCC+TGG - contig561end:23059-23078 None:intergenic 25.0%
!!! ATTGCAAATTTTGAAACTTG+TGG - contig561end:22927-22946 None:intergenic 25.0%
!!! CAAAAGCTTTAAGCTTTTAT+TGG - contig561end:18881-18900 None:intergenic 25.0%
!!! CATTTTTTGCATTCATGTTT+AGG + contig561end:22678-22697 MsG0080048952.01.T01:intron 25.0%
!!! CGCAACTTTTTAAAACTTAA+GGG - contig561end:19802-19821 None:intergenic 25.0%
!!! CGGTTAATTTTAATATGGTT+CGG + contig561end:14689-14708 MsG0080048952.01.T01:intron 25.0%
!!! GCAACTTTTTAAAACTTAAG+GGG - contig561end:19801-19820 None:intergenic 25.0%
!!! GCATATTAATTTGTCAGAAA+AGG + contig561end:25524-25543 MsG0080048952.01.T01:intron 25.0%
!!! GCTTTTTTTTTTCATGTTAC+TGG - contig561end:12580-12599 None:intergenic 25.0%
!!! GTATGATTGATTTTGGTTTT+TGG - contig561end:14186-14205 None:intergenic 25.0%
!!! GTCATAGTAGTTTTAAAATC+AGG + contig561end:22321-22340 MsG0080048952.01.T01:intron 25.0%
!!! GTTTTAAAAAGTTGCGATTT+TGG + contig561end:19806-19825 MsG0080048952.01.T01:intron 25.0%
!!! TAGCAGAATTTTTTAACCTT+TGG - contig561end:11719-11738 None:intergenic 25.0%
!!! TATGATTGATTTTGGTTTGT+GGG - contig561end:14133-14152 None:intergenic 25.0%
!!! TCAAAATATTGGTTTTGGTT+CGG - contig561end:11290-11309 None:intergenic 25.0%
!!! TCATGTAATTTTAAGACCAT+AGG - contig561end:12465-12484 None:intergenic 25.0%
!!! TCGCAACTTTTTAAAACTTA+AGG - contig561end:19803-19822 None:intergenic 25.0%
!!! TCTCTTATTTTAACTTGTGT+AGG + contig561end:9802-9821 MsG0080048952.01.T01:intron 25.0%
!!! TGGTTCGGTTAATTTTAATA+TGG + contig561end:14684-14703 MsG0080048952.01.T01:intron 25.0%
!!! TGTTTTTGTGACATTTGTTA+AGG - contig561end:18190-18209 None:intergenic 25.0%
!!! TTCCTTTTTTTTTCTTCCAA+AGG + contig561end:9392-9411 MsG0080048952.01.T01:exon 25.0%
!!! TTGATTTTTTTGACTTGGAT+CGG - contig561end:11903-11922 None:intergenic 25.0%
!!! TTTGCCATTTTTTATTCTCA+TGG + contig561end:28223-28242 MsG0080048952.01.T01:intron 25.0%
!!! TTTTTGGGTATGATTGATTT+TGG - contig561end:14193-14212 None:intergenic 25.0%
AAAACAATGGAGAGAGAAAA+AGG + contig561end:9707-9726 MsG0080048952.01.T01:intron 30.0%
AAACATATCTCACACTCAAA+CGG + contig561end:19376-19395 MsG0080048952.01.T01:intron 30.0%
AAACCGTTCATTTGAATAAC+TGG + contig561end:24126-24145 MsG0080048952.01.T01:intron 30.0%
AAAGTCCACTTCAATTGTAA+GGG - contig561end:11116-11135 None:intergenic 30.0%
AAAGTGACGTGTGAAATATT+TGG - contig561end:14044-14063 None:intergenic 30.0%
AAATAAAATCTTACGCACAG+TGG + contig561end:24798-24817 MsG0080048952.01.T01:intron 30.0%
AAATAGATAACACGCTTCTT+GGG + contig561end:10004-10023 MsG0080048952.01.T01:intron 30.0%
AAATTGAATATTGTCAGGTG+TGG - contig561end:21532-21551 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - contig561end:17297-17316 None:intergenic 30.0%
AAATTTGACCAGTGAGTATA+TGG - contig561end:22964-22983 None:intergenic 30.0%
AACAAAACATGATACAGAAC+TGG - contig561end:28185-28204 None:intergenic 30.0%
AACAAGAATTTAACACCCAT+GGG - contig561end:15127-15146 None:intergenic 30.0%
AACATCCACTACTAATTGAT+TGG + contig561end:25157-25176 MsG0080048952.01.T01:intron 30.0%
AACCAATTGCACACAAATTA+AGG - contig561end:17406-17425 None:intergenic 30.0%
AACCGTTCATTTGAATAACT+GGG + contig561end:24127-24146 MsG0080048952.01.T01:intron 30.0%
AACGATTTCTTCTATTTGTG+TGG + contig561end:22113-22132 MsG0080048952.01.T01:intron 30.0%
AACTTTACCATCTCAAAATC+CGG + contig561end:22206-22225 MsG0080048952.01.T01:intron 30.0%
AAGTTCATTCTAGCATGAAT+CGG + contig561end:10870-10889 MsG0080048952.01.T01:intron 30.0%
AATAAAATCTTACGCACAGT+GGG + contig561end:24799-24818 MsG0080048952.01.T01:intron 30.0%
AATAACTGGGTAAAAAGTTG+TGG + contig561end:24140-24159 MsG0080048952.01.T01:intron 30.0%
AATACAAAACCCTCATCATT+TGG + contig561end:26463-26482 MsG0080048952.01.T01:intron 30.0%
AATACTTCCAATAAAACCGT+TGG - contig561end:15837-15856 None:intergenic 30.0%
AATAGATTCGTAACACAATG+CGG + contig561end:15202-15221 MsG0080048952.01.T01:intron 30.0%
AATAGGAACATATGCTATGA+AGG - contig561end:28613-28632 None:intergenic 30.0%
AATGAGATTATCCTAGTTGA+TGG - contig561end:12497-12516 None:intergenic 30.0%
AATGATATTGCATCGAAACA+TGG - contig561end:23192-23211 None:intergenic 30.0%
AATTAAACTAACCAACCGTA+AGG + contig561end:10628-10647 MsG0080048952.01.T01:intron 30.0%
ACAGAAGCAATATTGAGAAA+AGG + contig561end:16608-16627 MsG0080048952.01.T01:intron 30.0%
ACCACCATGAGAATAAAAAA+TGG - contig561end:28230-28249 None:intergenic 30.0%
ACCATTTCAAAATTTCGGTT+CGG - contig561end:11172-11191 None:intergenic 30.0%
ACGTGTTTATTAAGTCTCTT+AGG + contig561end:26323-26342 MsG0080048952.01.T01:intron 30.0%
ACTTGGATATAGCAAAACTA+AGG - contig561end:16199-16218 None:intergenic 30.0%
AGAAAGGAATAAGACATCTT+TGG - contig561end:18956-18975 None:intergenic 30.0%
AGACATGAATTGAAGTGAAT+TGG + contig561end:12314-12333 MsG0080048952.01.T01:intron 30.0%
AGAGAAGAAGAAGAAAAGAA+AGG + contig561end:21081-21100 MsG0080048952.01.T01:intron 30.0%
AGGTTTGAATCGTTTGATTA+TGG - contig561end:20166-20185 None:intergenic 30.0%
AGTAAACTCGTATATTGCAT+GGG + contig561end:27840-27859 MsG0080048952.01.T01:CDS 30.0%
AGTACAAGGCAAGATAAATA+TGG + contig561end:27873-27892 MsG0080048952.01.T01:CDS 30.0%
AGTATCATAGAACTGATAGA+GGG + contig561end:25241-25260 MsG0080048952.01.T01:intron 30.0%
AGTCCATTCAGTAATTTCAT+CGG - contig561end:18339-18358 None:intergenic 30.0%
AGTGAAAGTGAGAAAGATAA+CGG - contig561end:10765-10784 None:intergenic 30.0%
AGTTTCTACCATATGATGAT+AGG - contig561end:13187-13206 None:intergenic 30.0%
ATAAACCATATATCGGAGAA+AGG + contig561end:12919-12938 MsG0080048952.01.T01:intron 30.0%
ATACAAAACCCTCATCATTT+GGG + contig561end:26464-26483 MsG0080048952.01.T01:intron 30.0%
ATATCAGGTTATACTTTCAG+TGG + contig561end:27813-27832 MsG0080048952.01.T01:intron 30.0%
ATGAAAATGGAAAATGGATC+TGG - contig561end:21436-21455 None:intergenic 30.0%
ATTAAAATACCAAAGATGCG+AGG - contig561end:23922-23941 None:intergenic 30.0%
ATTATCTGCATAATGCAACT+AGG + contig561end:23249-23268 MsG0080048952.01.T01:intron 30.0%
ATTATGCAGATAATGCAACT+AGG - contig561end:23243-23262 None:intergenic 30.0%
ATTGAACCGTTATTTGAAGA+TGG - contig561end:14647-14666 None:intergenic 30.0%
ATTTAAGAAAACCTTACGGT+TGG - contig561end:10642-10661 None:intergenic 30.0%
ATTTGAGAGAGAAATAGGTT+TGG - contig561end:13821-13840 None:intergenic 30.0%
CAAATAATTCAACGGTAGAT+TGG - contig561end:26923-26942 None:intergenic 30.0%
CAACTAGGATATCTATACTA+TGG + contig561end:23264-23283 MsG0080048952.01.T01:intron 30.0%
CAATTCAAAGATCACAGTTA+AGG - contig561end:23972-23991 None:intergenic 30.0%
CAGTTACTACAACTCAAATT+AGG + contig561end:26130-26149 MsG0080048952.01.T01:intron 30.0%
CATAAAGTCAGAGATCAATT+TGG - contig561end:12249-12268 None:intergenic 30.0%
CATTGCACCAATTCAAAATT+AGG - contig561end:27133-27152 None:intergenic 30.0%
CTAAAAAATTGTATTGGAGG+AGG + contig561end:26490-26509 MsG0080048952.01.T01:intron 30.0%
CTAGAGGAATTCATAATTGA+GGG + contig561end:25410-25429 MsG0080048952.01.T01:intron 30.0%
CTATTGAATTGTTTCAGCAA+TGG - contig561end:12539-12558 None:intergenic 30.0%
CTCTCTCAAATCAATCTAAA+AGG + contig561end:13830-13849 MsG0080048952.01.T01:intron 30.0%
CTGAATTGTAGAGTATAAGA+AGG + contig561end:13611-13630 MsG0080048952.01.T01:intron 30.0%
CTGTGCTCAATCAAATATTA+GGG - contig561end:19615-19634 None:intergenic 30.0%
CTTCAAATAACGGTTCAATT+CGG + contig561end:14648-14667 MsG0080048952.01.T01:intron 30.0%
CTTGGATATAGCAAAACTAA+GGG - contig561end:16198-16217 None:intergenic 30.0%
GAAAATATTACCGATATTGG+TGG + contig561end:26280-26299 MsG0080048952.01.T01:intron 30.0%
GAAAGGAATAAGACATCTTT+GGG - contig561end:18955-18974 None:intergenic 30.0%
GAGAAGAAGAAGAAAAGAAA+GGG + contig561end:21082-21101 MsG0080048952.01.T01:intron 30.0%
GAGAGAAAGTTGTCATAAAA+TGG + contig561end:9763-9782 MsG0080048952.01.T01:intron 30.0%
GATAATCTCATTGTTAGTCA+TGG + contig561end:12505-12524 MsG0080048952.01.T01:intron 30.0%
GATATAGAGACTCATTTATC+AGG - contig561end:12412-12431 None:intergenic 30.0%
GATCATATTTCCCTTATGTT+AGG - contig561end:19894-19913 None:intergenic 30.0%
GATTATGAAGAAGACAATGA+AGG - contig561end:18770-18789 None:intergenic 30.0%
GATTCTTCCTTTCATTATCA+TGG + contig561end:23865-23884 MsG0080048952.01.T01:CDS 30.0%
GCATTATCTACATAATGCAA+GGG - contig561end:23301-23320 None:intergenic 30.0%
GGACTCAATTTCAAAATATG+AGG - contig561end:18723-18742 None:intergenic 30.0%
GGAGAAAATATTACCGATAT+TGG + contig561end:26277-26296 MsG0080048952.01.T01:intron 30.0%
GGATATCATTAATGAGAAGT+GGG - contig561end:22412-22431 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG + contig561end:26484-26503 MsG0080048952.01.T01:intron 30.0%
GTTTAAGAAAATATTAGGGG+AGG + contig561end:14985-15004 MsG0080048952.01.T01:intron 30.0%
TAACAAGAATTTAACACCCA+TGG - contig561end:15128-15147 None:intergenic 30.0%
TAACAGACAAATCAGAAGAA+AGG - contig561end:18972-18991 None:intergenic 30.0%
TAACCAAAATCAATCTGAAC+CGG - contig561end:14724-14743 None:intergenic 30.0%
TAATCTTGACCATCAATGTA+TGG - contig561end:25838-25857 None:intergenic 30.0%
TACCCAGTTATTCAAATGAA+CGG - contig561end:24132-24151 None:intergenic 30.0%
TACTATTCACACTGCAATTA+TGG + contig561end:23335-23354 MsG0080048952.01.T01:intron 30.0%
TAGTATCATAGAACTGATAG+AGG + contig561end:25240-25259 MsG0080048952.01.T01:intron 30.0%
TAGTCAATCTCGATAATTAG+GGG - contig561end:20962-20981 None:intergenic 30.0%
TATCTATTTGGAAAATGCGT+CGG - contig561end:9993-10012 None:intergenic 30.0%
TATGGTTATGTTTAGATGGA+GGG - contig561end:24357-24376 None:intergenic 30.0%
TATGTCTACAGGAAAAAATG+AGG - contig561end:22633-22652 None:intergenic 30.0%
TATTAGGAATGGAAAGATAG+AGG + contig561end:24592-24611 MsG0080048952.01.T01:intron 30.0%
TCAATTATGAATTCCTCTAG+AGG - contig561end:25410-25429 None:intergenic 30.0%
TCATATTTCCCTTATGTTAG+GGG - contig561end:19892-19911 None:intergenic 30.0%
TCATTAAGAAAATTGAGGGT+AGG + contig561end:19345-19364 MsG0080048952.01.T01:intron 30.0%
TCCATCTAAACATAACCATA+GGG + contig561end:24357-24376 MsG0080048952.01.T01:intron 30.0%
TCTAGAGGAATTCATAATTG+AGG + contig561end:25409-25428 MsG0080048952.01.T01:intron 30.0%
TCTGTGCTCAATCAAATATT+AGG - contig561end:19616-19635 None:intergenic 30.0%
TCTTAGACACGATATATTGA+AGG + contig561end:18550-18569 MsG0080048952.01.T01:intron 30.0%
TGATAAATTGTCTTACCCAT+TGG - contig561end:20123-20142 None:intergenic 30.0%
TGATGTATTGAGAGTAACTA+AGG - contig561end:12094-12113 None:intergenic 30.0%
TGCATTATCTACATAATGCA+AGG - contig561end:23302-23321 None:intergenic 30.0%
TGCATTTCGGTTCAAAATAT+TGG - contig561end:11301-11320 None:intergenic 30.0%
TGGAACTCCAAAAATATACA+AGG - contig561end:24747-24766 None:intergenic 30.0%
TGGAAGCTATAAACTGATAT+GGG + contig561end:28417-28436 MsG0080048952.01.T01:CDS 30.0%
TGTAAACTAAACTTATGGGT+TGG - contig561end:20335-20354 None:intergenic 30.0%
TTAACAGTGTTAAGGTTGAA+GGG - contig561end:10738-10757 None:intergenic 30.0%
TTCAGATATTGCATTCTTCA+GGG - contig561end:22591-22610 None:intergenic 30.0%
TTCAGTCAAGAATCCTAATA+AGG - contig561end:16144-16163 None:intergenic 30.0%
TTGATTATATATAGCGGTTG+AGG + contig561end:20707-20726 MsG0080048952.01.T01:intron 30.0%
TTTAACAGTGTTAAGGTTGA+AGG - contig561end:10739-10758 None:intergenic 30.0%
TTTATCTAACGGAAGTTTGA+CGG + contig561end:14908-14927 MsG0080048952.01.T01:intron 30.0%
TTTCAATATAACGAGTAGCT+TGG + contig561end:24918-24937 MsG0080048952.01.T01:intron 30.0%
TTTCTAGACTTTATGTCTAC+AGG - contig561end:22644-22663 None:intergenic 30.0%
! AAAACATTTTTCTTCACACC+CGG + contig561end:15316-15335 MsG0080048952.01.T01:intron 30.0%
! AAACATGGAGTTTTTGTTGA+TGG - contig561end:23177-23196 None:intergenic 30.0%
! AAGTTGTGTGTTTCTATTTG+AGG + contig561end:20873-20892 MsG0080048952.01.T01:intron 30.0%
! ACAAATTAGTTTCATCACCT+TGG + contig561end:25972-25991 MsG0080048952.01.T01:intron 30.0%
! AGCCTTTGGAAGAAAAAAAA+AGG - contig561end:9397-9416 None:intergenic 30.0%
! ATATTCCATTTGCAGTCTTT+TGG - contig561end:10585-10604 None:intergenic 30.0%
! ATGTTTTCTAATACGAAGAG+AGG - contig561end:19525-19544 None:intergenic 30.0%
! CAAAACAGTTGATTTCTATC+TGG + contig561end:25894-25913 MsG0080048952.01.T01:intron 30.0%
! CAATTGATTTCTATGAAGGA+AGG + contig561end:29007-29026 MsG0080048952.01.T01:exon 30.0%
! CTTTGAGAAAACAATACCAA+TGG + contig561end:10475-10494 MsG0080048952.01.T01:intron 30.0%
! GACTGTTCTATTTGAGTTAT+AGG + contig561end:23610-23629 MsG0080048952.01.T01:intron 30.0%
! GCCATTGTAATAGTTTTCTT+TGG - contig561end:12149-12168 None:intergenic 30.0%
! GGTGTGAAGAAAAATGTTTT+TGG - contig561end:15316-15335 None:intergenic 30.0%
! GTTGATAGAAAAATCTGCTA+AGG + contig561end:11692-11711 MsG0080048952.01.T01:intron 30.0%
! GTTTGAATGTTACTTCATGA+TGG + contig561end:25342-25361 MsG0080048952.01.T01:intron 30.0%
! TACCCTCAATTTTCTTAATG+AGG - contig561end:19346-19365 None:intergenic 30.0%
! TACTTTTCCAAAAAAGGTGA+AGG - contig561end:24438-24457 None:intergenic 30.0%
! TATTGTTTTCTCAAAGTCCA+CGG - contig561end:10471-10490 None:intergenic 30.0%
! TCAACTCAAAAAGCATAAAC+TGG - contig561end:18851-18870 None:intergenic 30.0%
! TGGGATTTTTCTTTAGTACA+AGG + contig561end:27859-27878 MsG0080048952.01.T01:CDS 30.0%
! TGTAAACATTTTCGTCATAG+TGG - contig561end:19563-19582 None:intergenic 30.0%
! TGTGTGAATATTTTGTGTGA+TGG - contig561end:12796-12815 None:intergenic 30.0%
! TTGTATGCATAATCTAGAGT+TGG + contig561end:27668-27687 MsG0080048952.01.T01:intron 30.0%
! TTTTGTAGTTCCCCAAAATT+AGG + contig561end:9290-9309 MsG0080048952.01.T01:exon 30.0%
!! AAACGACACTCATTTTGAAA+CGG - contig561end:17192-17211 None:intergenic 30.0%
!! AAATCGTCAAGAAAGTGTTT+AGG + contig561end:15928-15947 MsG0080048952.01.T01:intron 30.0%
!! AAGGTTTTGGTCATTTAGAA+AGG - contig561end:10520-10539 None:intergenic 30.0%
!! AATAATAATGCTCGAGTTGA+TGG + contig561end:25629-25648 MsG0080048952.01.T01:intron 30.0%
!! AATCGTCAAGAAAGTGTTTA+GGG + contig561end:15929-15948 MsG0080048952.01.T01:intron 30.0%
!! AGGTATTGCTTGATTTTACA+AGG + contig561end:23630-23649 MsG0080048952.01.T01:intron 30.0%
!! ATAGTTCAGTTAGTTGGTAA+AGG - contig561end:16531-16550 None:intergenic 30.0%
!! ATCTAATGAAGAATGGATTG+TGG - contig561end:22009-22028 None:intergenic 30.0%
!! ATTCAAATGAACGGTTTTAG+GGG - contig561end:24123-24142 None:intergenic 30.0%
!! CAACTTTTTGAGAAGATAAG+GGG - contig561end:19923-19942 None:intergenic 30.0%
!! CATGATCAGCATTTTTGATT+TGG - contig561end:21617-21636 None:intergenic 30.0%
!! GATTGATTTGAGAGAGAAAT+AGG - contig561end:13826-13845 None:intergenic 30.0%
!! GCAACTTTTTGAGAAGATAA+GGG - contig561end:19924-19943 None:intergenic 30.0%
!! GTAGATTTGTTAATTTGGGT+TGG - contig561end:15438-15457 None:intergenic 30.0%
!! GTGGTTAGAATTCACTTTTA+AGG - contig561end:20761-20780 None:intergenic 30.0%
!! GTTCCATAATTTTGTTTGCA+TGG + contig561end:22985-23004 MsG0080048952.01.T01:intron 30.0%
!! TAAATTGTAATGGTTCGGTT+CGG + contig561end:14573-14592 MsG0080048952.01.T01:intron 30.0%
!! TAGTTCAGTTAGTTGGTAAA+GGG - contig561end:16530-16549 None:intergenic 30.0%
!! TATTTTGAACCTAGTGTGAA+CGG + contig561end:27257-27276 MsG0080048952.01.T01:intron 30.0%
!! TGCTAGTAATTTTGATCAGT+GGG + contig561end:27341-27360 MsG0080048952.01.T01:intron 30.0%
!! TGTGTGGTATTGATTTGTAT+GGG - contig561end:13030-13049 None:intergenic 30.0%
!! TGTTGTAACTTTAAAGCCTT+TGG - contig561end:13911-13930 None:intergenic 30.0%
!! TTCCTTAATTTGTGTGCAAT+TGG + contig561end:17401-17420 MsG0080048952.01.T01:intron 30.0%
!! TTGCTAGTAATTTTGATCAG+TGG + contig561end:27340-27359 MsG0080048952.01.T01:intron 30.0%
!! TTTCTGGGTATGATTGATTT+TGG - contig561end:14141-14160 None:intergenic 30.0%
!!! AATCGTCATTTTTCCTGAAA+AGG - contig561end:27489-27508 None:intergenic 30.0%
!!! ACCGAAATTTTGAAATGGTT+CGG + contig561end:11173-11192 MsG0080048952.01.T01:intron 30.0%
!!! ACTTTTGAGGTATATTGACA+AGG + contig561end:27538-27557 MsG0080048952.01.T01:intron 30.0%
!!! ATCGCAACTTTTTGAAACTT+AGG + contig561end:20038-20057 MsG0080048952.01.T01:intron 30.0%
!!! ATTTTTGGAATCTAACAAGG+TGG - contig561end:12847-12866 None:intergenic 30.0%
!!! CTTTCTCTCTCTTTTTTTAG+AGG - contig561end:10962-10981 None:intergenic 30.0%
!!! GTATGATTGATTTTGGTTTG+TGG - contig561end:14134-14153 None:intergenic 30.0%
!!! TCATGTCTTTTTGTTTTGCA+GGG - contig561end:12302-12321 None:intergenic 30.0%
!!! TCGCAACTTTTTGAAACTTA+GGG + contig561end:20039-20058 MsG0080048952.01.T01:intron 30.0%
!!! TCGGTTCAAAATATTGGTTT+TGG - contig561end:11295-11314 None:intergenic 30.0%
!!! TTAGGTTTTGTTTGCAAGTT+TGG + contig561end:26341-26360 MsG0080048952.01.T01:intron 30.0%
!!! TTCATGTCTTTTTGTTTTGC+AGG - contig561end:12303-12322 None:intergenic 30.0%
AAAAATCTGCTAAGGTCCAA+AGG + contig561end:11700-11719 MsG0080048952.01.T01:intron 35.0%
AAAACTTTAGTGTCTCTGTC+TGG - contig561end:16800-16819 None:intergenic 35.0%
AAAAGAGTAAATCCTGACCA+TGG - contig561end:26753-26772 None:intergenic 35.0%
AAACAATGGTTATCTCCCAT+GGG + contig561end:15109-15128 MsG0080048952.01.T01:intron 35.0%
AAACCAAATAGTTACCCCAA+TGG - contig561end:25044-25063 None:intergenic 35.0%
AAACTCCAAAAGACTGCAAA+TGG + contig561end:10577-10596 MsG0080048952.01.T01:intron 35.0%
AAAGGAAGAGAATATTCGAG+AGG + contig561end:21019-21038 MsG0080048952.01.T01:intron 35.0%
AACAACAAATGGAAAGGAGA+AGG + contig561end:21790-21809 MsG0080048952.01.T01:CDS 35.0%
AACACAGACTAATCAACCTA+TGG + contig561end:12446-12465 MsG0080048952.01.T01:intron 35.0%
AACACTTTCTTGACGATTTC+TGG - contig561end:15927-15946 None:intergenic 35.0%
AACGAAGAAGATACCCAAAT+AGG + contig561end:18250-18269 MsG0080048952.01.T01:intron 35.0%
AACTACTATGACGTCAAATG+TGG - contig561end:22313-22332 None:intergenic 35.0%
AAGAAAAGAAAGGGAAAGGT+GGG + contig561end:21091-21110 MsG0080048952.01.T01:intron 35.0%
AAGAGATCCAACAAAATTCG+AGG - contig561end:18609-18628 None:intergenic 35.0%
AAGGAAGAGAATATTCGAGA+GGG + contig561end:21020-21039 MsG0080048952.01.T01:intron 35.0%
AAGTAATATCAAGCGCAGTT+TGG + contig561end:25944-25963 MsG0080048952.01.T01:intron 35.0%
AAGTCCACTTCAATTGTAAG+GGG - contig561end:11115-11134 None:intergenic 35.0%
AAGTTAACCCTTCAAATGAG+AGG + contig561end:28688-28707 MsG0080048952.01.T01:intron 35.0%
AATGAATTCACAGTGGTAAC+GGG + contig561end:16242-16261 MsG0080048952.01.T01:intron 35.0%
AATTAACCGAACCATTGCAT+TGG - contig561end:14678-14697 None:intergenic 35.0%
AATTCGGTTAACCAATGCAA+TGG + contig561end:14664-14683 MsG0080048952.01.T01:intron 35.0%
AATTGAACACATCTCGATCT+TGG - contig561end:28992-29011 None:intergenic 35.0%
AATTGTCTTACCCATTGGAA+TGG - contig561end:20118-20137 None:intergenic 35.0%
AATTTCTGCACATTAATGGC+TGG + contig561end:28397-28416 MsG0080048952.01.T01:CDS 35.0%
ACAAACATGACAGACTAACT+TGG - contig561end:28301-28320 None:intergenic 35.0%
ACAGGATAACTCTTATCTAC+TGG + contig561end:23768-23787 MsG0080048952.01.T01:intron 35.0%
ACAGTAGATGAAAAAGGAAG+AGG + contig561end:13083-13102 MsG0080048952.01.T01:intron 35.0%
ACCAAAGGATGTGAAATAGA+AGG - contig561end:16750-16769 None:intergenic 35.0%
ACCTTCTATTTCACATCCTT+TGG + contig561end:16746-16765 MsG0080048952.01.T01:intron 35.0%
ACGGTGATTTAACAGTGTTA+AGG - contig561end:10746-10765 None:intergenic 35.0%
ACTCAAATTAGGAGATGTCA+AGG + contig561end:26141-26160 MsG0080048952.01.T01:intron 35.0%
ACTCATAGAACCATTCCAAT+GGG + contig561end:20105-20124 MsG0080048952.01.T01:intron 35.0%
ACTGAACCAAAGTTATGGTT+CGG + contig561end:11231-11250 MsG0080048952.01.T01:intron 35.0%
AGAAAAAAAAAGGAAGGAGC+AGG - contig561end:9387-9406 None:intergenic 35.0%
AGAGAAGAGGATTAACTGTA+TGG + contig561end:26839-26858 MsG0080048952.01.T01:intron 35.0%
AGAGCGTGACTCAATTAATT+AGG - contig561end:18507-18526 None:intergenic 35.0%
AGAGGTTCATCACATTTCTT+AGG + contig561end:25600-25619 MsG0080048952.01.T01:CDS 35.0%
AGCATATTTCCCTAGACATA+AGG - contig561end:19862-19881 None:intergenic 35.0%
AGCGCCTTGAAACTAAATAA+TGG + contig561end:22435-22454 MsG0080048952.01.T01:intron 35.0%
AGCTATACTATGTAGGAACA+TGG - contig561end:23218-23237 None:intergenic 35.0%
AGGAGTCAAAATCCAAATTG+CGG - contig561end:16708-16727 None:intergenic 35.0%
AGGTGAATAAATCGAGTATC+CGG - contig561end:20741-20760 None:intergenic 35.0%
AGTATTAACCGCAAAATCAC+AGG + contig561end:15851-15870 MsG0080048952.01.T01:intron 35.0%
AGTCAAGAATCCTAATAAGG+TGG - contig561end:16141-16160 None:intergenic 35.0%
ATAAAATCTTACGCACAGTG+GGG + contig561end:24800-24819 MsG0080048952.01.T01:intron 35.0%
ATAATGTAAGATCCATGGTC+AGG + contig561end:26738-26757 MsG0080048952.01.T01:intron 35.0%
ATCATCAACATTCGTAACTG+CGG - contig561end:16775-16794 None:intergenic 35.0%
ATCATCAATTCCCAAATCAG+TGG - contig561end:21290-21309 None:intergenic 35.0%
ATCATCCTTTCTCCGATATA+TGG - contig561end:12927-12946 None:intergenic 35.0%
ATCTAAACATAACCATAGGG+AGG + contig561end:24360-24379 MsG0080048952.01.T01:intron 35.0%
ATCTATTTGGAAAATGCGTC+GGG - contig561end:9992-10011 None:intergenic 35.0%
ATCTGACTCAGATGTATTTG+TGG + contig561end:27726-27745 MsG0080048952.01.T01:intron 35.0%
ATGAAGATTGATAAGGCTTC+TGG - contig561end:28106-28125 None:intergenic 35.0%
ATGAGCATAGTTCAGTTAGT+TGG - contig561end:16537-16556 None:intergenic 35.0%
ATGCTTGCAATCTCAAAGTT+TGG + contig561end:10054-10073 MsG0080048952.01.T01:intron 35.0%
ATGGTCAGATTAACTCTTCA+TGG + contig561end:26858-26877 MsG0080048952.01.T01:intron 35.0%
ATGTGATATCAGAGAAAAGC+TGG + contig561end:15964-15983 MsG0080048952.01.T01:intron 35.0%
ATTCCAAAAATGCCACTAAG+TGG + contig561end:12856-12875 MsG0080048952.01.T01:CDS 35.0%
ATTGGGGTAACTATTTGGTT+TGG + contig561end:25043-25062 MsG0080048952.01.T01:intron 35.0%
ATTTCTATGAAGGAAGGGAT+AGG + contig561end:29013-29032 MsG0080048952.01.T01:exon 35.0%
ATTTCTCTGTTTCATCGAAG+TGG - contig561end:13056-13075 None:intergenic 35.0%
CAAAATCTTCTCCCTGTATA+GGG + contig561end:24550-24569 MsG0080048952.01.T01:intron 35.0%
CAAAGTCCACTTCAATTGTA+AGG - contig561end:11117-11136 None:intergenic 35.0%
CAAATAGATAACACGCTTCT+TGG + contig561end:10003-10022 MsG0080048952.01.T01:intron 35.0%
CAAATGTGAACCCTTGTAAA+CGG - contig561end:18423-18442 None:intergenic 35.0%
CAATGAATTCACAGTGGTAA+CGG + contig561end:16241-16260 MsG0080048952.01.T01:intron 35.0%
CAGCTTATGGGGAAAATATA+GGG - contig561end:26663-26682 None:intergenic 35.0%
CAGTAAACTCGTATATTGCA+TGG + contig561end:27839-27858 MsG0080048952.01.T01:CDS 35.0%
CATGAAGTAACATTCAAACG+CGG - contig561end:25341-25360 None:intergenic 35.0%
CATGATACAGAACTGGATAA+CGG - contig561end:28178-28197 None:intergenic 35.0%
CCAAATAACCATATACTCAC+TGG + contig561end:22953-22972 MsG0080048952.01.T01:intron 35.0%
CCAGTGAGTATATGGTTATT+TGG - contig561end:22956-22975 None:intergenic 35.0%
CCCGAACCATTTCAAAATTT+CGG - contig561end:11177-11196 None:intergenic 35.0%
CGAAATGCTATGAAACTTTG+CGG - contig561end:22874-22893 None:intergenic 35.0%
CGAATCCAATCAATTAGTAG+TGG - contig561end:25165-25184 None:intergenic 35.0%
CTAGTTCAGAACTTGAGAAA+CGG + contig561end:14812-14831 MsG0080048952.01.T01:intron 35.0%
CTATGGTTATGTTTAGATGG+AGG - contig561end:24358-24377 None:intergenic 35.0%
CTCCATCTAAACATAACCAT+AGG + contig561end:24356-24375 MsG0080048952.01.T01:intron 35.0%
CTGAAGTTATGCTTGATGAA+TGG + contig561end:10132-10151 MsG0080048952.01.T01:intron 35.0%
CTGGAAGCTATAAACTGATA+TGG + contig561end:28416-28435 MsG0080048952.01.T01:CDS 35.0%
CTTAAGGTCAATGCAACTTA+AGG + contig561end:13574-13593 MsG0080048952.01.T01:intron 35.0%
CTTATCTTAATTAGCCGCTA+GGG - contig561end:10547-10566 None:intergenic 35.0%
CTTCAGATATTGCATTCTTC+AGG - contig561end:22592-22611 None:intergenic 35.0%
GAACTTTATCTCTCACAAAG+TGG - contig561end:26252-26271 None:intergenic 35.0%
GAAGAAGAAAAGAAAGGGAA+AGG + contig561end:21087-21106 MsG0080048952.01.T01:intron 35.0%
GAAGAGATATGAAGTTGTTG+TGG - contig561end:18633-18652 None:intergenic 35.0%
GATAACTCTTATCTACTGGT+AGG + contig561end:23772-23791 MsG0080048952.01.T01:intron 35.0%
GATTGACTAATAACTGAGCA+TGG + contig561end:20973-20992 MsG0080048952.01.T01:intron 35.0%
GATTTGGAAAGATTCCAAAG+TGG - contig561end:21601-21620 None:intergenic 35.0%
GCATATTTCCCTAGACATAA+GGG - contig561end:19861-19880 None:intergenic 35.0%
GCTGAAACAATTCAATAGCA+AGG + contig561end:12541-12560 MsG0080048952.01.T01:intron 35.0%
GGATGTTACATTCAACTAGT+TGG - contig561end:25144-25163 None:intergenic 35.0%
GGCATGAGTAATTAGAACTT+CGG - contig561end:28971-28990 None:intergenic 35.0%
GGGATATCATTAATGAGAAG+TGG - contig561end:22413-22432 None:intergenic 35.0%
GGGGAAAATATAGGGAAAAT+TGG - contig561end:26655-26674 None:intergenic 35.0%
GGTCAATACATTGTTGAGTT+GGG - contig561end:15396-15415 None:intergenic 35.0%
GTCAAGAATCCTAATAAGGT+GGG - contig561end:16140-16159 None:intergenic 35.0%
GTCATTTAGAAAGGAGAAAG+AGG - contig561end:10511-10530 None:intergenic 35.0%
GTGAAGATCGCAGAAAAAAA+TGG + contig561end:14290-14309 MsG0080048952.01.T01:intron 35.0%
GTGAGAGATAAAGTTCTTTC+AGG + contig561end:26256-26275 MsG0080048952.01.T01:intron 35.0%
GTTGAAAGCAATATGTAGCT+TGG - contig561end:26189-26208 None:intergenic 35.0%
GTTTGATTCTATAGCAGTTG+TGG + contig561end:25442-25461 MsG0080048952.01.T01:intron 35.0%
TAAGTTGTACGATCTTACAC+AGG - contig561end:9493-9512 None:intergenic 35.0%
TAATCCTCTTCTCTCATTTC+AGG - contig561end:26833-26852 None:intergenic 35.0%
TACAAAACCCTCATCATTTG+GGG + contig561end:26465-26484 MsG0080048952.01.T01:intron 35.0%
TACAAACACACAAGTGAATC+TGG + contig561end:13660-13679 MsG0080048952.01.T01:intron 35.0%
TACAGTACTATACAGAGATG+TGG - contig561end:10217-10236 None:intergenic 35.0%
TACATAATGCAAGGGTTTGA+GGG - contig561end:23293-23312 None:intergenic 35.0%
TAGAAAAAAATGGAAGGGGA+TGG - contig561end:9354-9373 None:intergenic 35.0%
TAGATGATATTAAGAGGGGA+AGG + contig561end:26415-26434 MsG0080048952.01.T01:intron 35.0%
TAGCTTCAATGAATTCACAG+TGG + contig561end:16235-16254 MsG0080048952.01.T01:intron 35.0%
TATAATGACTGTAGGTGCTA+CGG + contig561end:28816-28835 MsG0080048952.01.T01:intron 35.0%
TATGAAGAAGACAATGAAGG+TGG - contig561end:18767-18786 None:intergenic 35.0%
TATTCAGTAATCAGTCCAAG+CGG - contig561end:28522-28541 None:intergenic 35.0%
TCAAAATCTTCTCCCTGTAT+AGG + contig561end:24549-24568 MsG0080048952.01.T01:intron 35.0%
TCACAAAGAGAAAGTGAATC+TGG - contig561end:12602-12621 None:intergenic 35.0%
TCCCTATGGTTATGTTTAGA+TGG - contig561end:24361-24380 None:intergenic 35.0%
TCGGTTCATAGGTAAGAAAA+CGG - contig561end:11261-11280 None:intergenic 35.0%
TCTAAACATAACCATAGGGA+GGG + contig561end:24361-24380 MsG0080048952.01.T01:intron 35.0%
TCTCATTTGAAGGGTTAACT+TGG - contig561end:28689-28708 None:intergenic 35.0%
TCTCCGATGAAATTACTGAA+TGG + contig561end:18333-18352 MsG0080048952.01.T01:intron 35.0%
TCTGGAAACAACAAATGGAA+AGG + contig561end:21784-21803 MsG0080048952.01.T01:CDS 35.0%
TCTGGCAAAGTCAATATCTT+AGG - contig561end:15909-15928 None:intergenic 35.0%
TCTGTGTTCAGTTACAATTC+AGG - contig561end:12434-12453 None:intergenic 35.0%
TCTTAGGAGTTGTCAAATGA+AGG - contig561end:13728-13747 None:intergenic 35.0%
TGAAAAACGATGACGACTAT+TGG + contig561end:19067-19086 MsG0080048952.01.T01:intron 35.0%
TGAAAACAGTTGTGACTATG+AGG + contig561end:16321-16340 MsG0080048952.01.T01:intron 35.0%
TGAACGAAAATAACTCCTGA+TGG - contig561end:18300-18319 None:intergenic 35.0%
TGACAATTTGTGAACTGACA+TGG + contig561end:26101-26120 MsG0080048952.01.T01:intron 35.0%
TGATGCAAAAATGTCGTAGA+AGG + contig561end:28887-28906 MsG0080048952.01.T01:exon 35.0%
TGGTCAATACATTGTTGAGT+TGG - contig561end:15397-15416 None:intergenic 35.0%
TGTGATATCAGAGAAAAGCT+GGG + contig561end:15965-15984 MsG0080048952.01.T01:intron 35.0%
TGTGTGTGAATAACAATCAC+AGG + contig561end:23750-23769 MsG0080048952.01.T01:intron 35.0%
TTATGTTTAGATGGAGGGTT+TGG - contig561end:24352-24371 None:intergenic 35.0%
TTATTAGGGAATGGGATGAA+TGG + contig561end:24398-24417 MsG0080048952.01.T01:intron 35.0%
TTATTCTCATGGTGGTTGAT+TGG + contig561end:28234-28253 MsG0080048952.01.T01:intron 35.0%
TTCATTTGTGTTCTCTACTG+TGG - contig561end:13981-14000 None:intergenic 35.0%
TTCCAAAAATGCCACTAAGT+GGG + contig561end:12857-12876 MsG0080048952.01.T01:CDS 35.0%
TTCCCATTTGCATAGATCAT+TGG + contig561end:28735-28754 MsG0080048952.01.T01:intron 35.0%
TTCCTGAGGTATGTATCTAT+GGG + contig561end:21877-21896 MsG0080048952.01.T01:intron 35.0%
TTCTGCTAAGTTAGTAGTTG+TGG + contig561end:11731-11750 MsG0080048952.01.T01:intron 35.0%
TTGGCGGTAATTTGATCAAA+TGG + contig561end:26014-26033 MsG0080048952.01.T01:intron 35.0%
TTGGTTACAGACACTAGAAA+AGG - contig561end:26904-26923 None:intergenic 35.0%
TTTGAGCTGATTGTTTGTAG+AGG + contig561end:22823-22842 MsG0080048952.01.T01:intron 35.0%
TTTGAGCTTCCCAAGAATAA+TGG - contig561end:21556-21575 None:intergenic 35.0%
! AATTACTGAATGGACTCGAT+AGG + contig561end:18343-18362 MsG0080048952.01.T01:intron 35.0%
! ACAATTGAAGTGGACTTTGT+GGG + contig561end:11118-11137 MsG0080048952.01.T01:intron 35.0%
! ACATTTTTGCATCAGTCGAA+TGG - contig561end:28881-28900 None:intergenic 35.0%
! ACCATAACTTTGGTTCAGTT+CGG - contig561end:11230-11249 None:intergenic 35.0%
! ACTGTTTTGTCTTCTAGTAC+TGG + contig561end:23553-23572 MsG0080048952.01.T01:intron 35.0%
! AGAACTTACAATCTTTTCCC+CGG - contig561end:28035-28054 None:intergenic 35.0%
! AGTTGATATGCACTTTGTGT+GGG - contig561end:26807-26826 None:intergenic 35.0%
! ATGAACAGAGCATCAAAGTT+AGG - contig561end:14759-14778 None:intergenic 35.0%
! ATTGTTTTCTCAAAGTCCAC+GGG - contig561end:10470-10489 None:intergenic 35.0%
! ATTTAGTTTCAAGGCGCTAT+GGG - contig561end:22433-22452 None:intergenic 35.0%
! ATTTTTGTTAGGTGGTCTAG+TGG - contig561end:20780-20799 None:intergenic 35.0%
! CAACTGTTTTGTGAGAGATA+AGG - contig561end:25885-25904 None:intergenic 35.0%
! CAAGAAGCGTGTTATCTATT+TGG - contig561end:10005-10024 None:intergenic 35.0%
! CATAGAAGAGCTAAGACTTT+TGG + contig561end:15153-15172 MsG0080048952.01.T01:intron 35.0%
! CTTTTCTCTGATATCACATC+TGG - contig561end:15963-15982 None:intergenic 35.0%
! GAAGTGAATTGGCTTAGAAA+GGG + contig561end:12325-12344 MsG0080048952.01.T01:intron 35.0%
! GAATATTTTGTGTGATGGCT+TGG - contig561end:12791-12810 None:intergenic 35.0%
! GAATGGTTCTATGAGTGATA+AGG - contig561end:20101-20120 None:intergenic 35.0%
! GAGTTTCTTTTCCATCAACT+AGG + contig561end:12483-12502 MsG0080048952.01.T01:intron 35.0%
! TACAATTGAAGTGGACTTTG+TGG + contig561end:11117-11136 MsG0080048952.01.T01:intron 35.0%
! TATCTACCACAAGATTTTCG+AGG + contig561end:21657-21676 MsG0080048952.01.T01:CDS 35.0%
! TATTTAGTTTCAAGGCGCTA+TGG - contig561end:22434-22453 None:intergenic 35.0%
! TCTTCTCTGGAAACAACAAA+TGG + contig561end:21779-21798 MsG0080048952.01.T01:CDS 35.0%
! TCTTTTGACCCCTAACATAA+GGG + contig561end:19881-19900 MsG0080048952.01.T01:intron 35.0%
! TGAAATAGAAGGTGCGTTTA+GGG - contig561end:16739-16758 None:intergenic 35.0%
! TGAACAGAGCATCAAAGTTA+GGG - contig561end:14758-14777 None:intergenic 35.0%
! TGAAGTGAATTGGCTTAGAA+AGG + contig561end:12324-12343 MsG0080048952.01.T01:intron 35.0%
! TTGGGGTAACTATTTGGTTT+GGG + contig561end:25044-25063 MsG0080048952.01.T01:intron 35.0%
! TTGTGTGTTTCTATTTGAGG+AGG + contig561end:20876-20895 MsG0080048952.01.T01:intron 35.0%
! TTTAGTTCCCCAAATGATGA+GGG - contig561end:26475-26494 None:intergenic 35.0%
! TTTCATGTTACTGGTTGTGT+TGG - contig561end:12571-12590 None:intergenic 35.0%
! TTTTCATCAATCTTATGCGG+AGG - contig561end:21334-21353 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + contig561end:17427-17446 MsG0080048952.01.T01:intron 35.0%
!! ACCGAACCGAAATTTTGAAA+TGG + contig561end:11168-11187 MsG0080048952.01.T01:intron 35.0%
!! AGTTCAGTTAGTTGGTAAAG+GGG - contig561end:16529-16548 None:intergenic 35.0%
!! ATCGTCAAGAAAGTGTTTAG+GGG + contig561end:15930-15949 MsG0080048952.01.T01:intron 35.0%
!! CATCTCCTAATTTGAGTTGT+TGG + contig561end:25995-26014 MsG0080048952.01.T01:intron 35.0%
!! CGCAACTTTTTGAGAAGATA+AGG - contig561end:19925-19944 None:intergenic 35.0%
!! CTTTTGGAGATGGATGAATA+TGG + contig561end:18576-18595 MsG0080048952.01.T01:intron 35.0%
!! GCTAGTAATTTTGATCAGTG+GGG + contig561end:27342-27361 MsG0080048952.01.T01:intron 35.0%
!! GTGTGGTATTGATTTGTATG+GGG - contig561end:13029-13048 None:intergenic 35.0%
!! GTGTGTGGTATTGATTTGTA+TGG - contig561end:13031-13050 None:intergenic 35.0%
!! TAACCGGTTCAGATTGATTT+TGG + contig561end:14718-14737 MsG0080048952.01.T01:intron 35.0%
!! TAGGTTTGGCTTGTATTGAA+AGG - contig561end:13807-13826 None:intergenic 35.0%
!! TCAGGAGTTATTTTCGTTCA+TGG + contig561end:18300-18319 MsG0080048952.01.T01:intron 35.0%
!! TTCAAAATTTCGGTTCGGTT+CGG - contig561end:11167-11186 None:intergenic 35.0%
!! TTGAAGGAATCTTTTGGAGA+TGG + contig561end:18566-18585 MsG0080048952.01.T01:intron 35.0%
!! TTGTTTTGTATTGGCACTCT+TGG + contig561end:15808-15827 MsG0080048952.01.T01:intron 35.0%
!! TTTCAAGAAGCAGCTTTAAG+AGG + contig561end:15686-15705 MsG0080048952.01.T01:intron 35.0%
!! TTTTGTTTGCAAGTTTGGTG+GGG + contig561end:26346-26365 MsG0080048952.01.T01:intron 35.0%
!! TTTTTGCTGTGTTTCTGTTG+CGG - contig561end:13403-13422 None:intergenic 35.0%
!!! ATATTGGTTTTGGTTCGGTT+CGG - contig561end:11285-11304 None:intergenic 35.0%
!!! CCGAAATTTTGAAATGGTTC+GGG + contig561end:11174-11193 MsG0080048952.01.T01:intron 35.0%
!!! CGCAACTTTTTGAAACTTAG+GGG + contig561end:20040-20059 MsG0080048952.01.T01:intron 35.0%
!!! CTCTCTCTTTTTTTAGAGGA+AGG - contig561end:10958-10977 None:intergenic 35.0%
!!! GAGGTATCCTTCACTTTTTT+TGG + contig561end:24611-24630 MsG0080048952.01.T01:intron 35.0%
!!! GCCATTTTTTATTCTCATGG+TGG + contig561end:28226-28245 MsG0080048952.01.T01:intron 35.0%
!!! GGCATTTTTGGAATCTAACA+AGG - contig561end:12850-12869 None:intergenic 35.0%
!!! GTTTTGTTTGCAAGTTTGGT+GGG + contig561end:26345-26364 MsG0080048952.01.T01:intron 35.0%
!!! TAAGGTTTTGTTTGCGAGTT+TGG - contig561end:9427-9446 None:intergenic 35.0%
!!! TTCAAATGAACGGTTTTAGG+GGG - contig561end:24122-24141 None:intergenic 35.0%
!!! TTCTCTACTGTGGAGTTTTT+TGG - contig561end:13971-13990 None:intergenic 35.0%
!!! TTTTAGTTCCCCAAATGATG+AGG - contig561end:26476-26495 None:intergenic 35.0%
!!! TTTTTTGACTTGGATCGGAT+CGG - contig561end:11898-11917 None:intergenic 35.0%
!!! TTTTTTGTGTGTGTGCGAAT+TGG + contig561end:27921-27940 MsG0080048952.01.T01:intron 35.0%
AAAAGCGATCCCTTATGTCT+AGG + contig561end:19849-19868 MsG0080048952.01.T01:intron 40.0%
AAAATAAGCCCTCCCTATAC+AGG - contig561end:24565-24584 None:intergenic 40.0%
AAACAGCAATTCGAGTAAGG+AGG + contig561end:16444-16463 MsG0080048952.01.T01:intron 40.0%
AAAGAGATAAGTGTTCCAGC+TGG + contig561end:27511-27530 MsG0080048952.01.T01:CDS 40.0%
AAAGCGATCCCTTATGTCTA+GGG + contig561end:19850-19869 MsG0080048952.01.T01:intron 40.0%
AAATAAGCCCTCCCTATACA+GGG - contig561end:24564-24583 None:intergenic 40.0%
AACAGATTTCCGTTCACACT+AGG - contig561end:27269-27288 None:intergenic 40.0%
AACCCATAGATACATACCTC+AGG - contig561end:21882-21901 None:intergenic 40.0%
AACCCTAATTTCTCCTCTTC+AGG - contig561end:14453-14472 None:intergenic 40.0%
AAGAGATAAGTGTTCCAGCT+GGG + contig561end:27512-27531 MsG0080048952.01.T01:CDS 40.0%
AAGAGGAAATGTGGTACCAT+TGG - contig561end:10494-10513 None:intergenic 40.0%
AATGCGGAATTTGGGGATAA+AGG + contig561end:15218-15237 MsG0080048952.01.T01:intron 40.0%
AATTGAGTCACGCTCTTATG+TGG + contig561end:18511-18530 MsG0080048952.01.T01:intron 40.0%
AATTGTCTCATTATCCCGCT+TGG + contig561end:28504-28523 MsG0080048952.01.T01:intron 40.0%
ACAATCTAATTGGCCAGACA+CGG + contig561end:21401-21420 MsG0080048952.01.T01:CDS 40.0%
ACATCTGCTGGAATGAAGAA+AGG - contig561end:27382-27401 None:intergenic 40.0%
ACCATCAATGTATGGTTGCA+TGG - contig561end:25830-25849 None:intergenic 40.0%
ACCATGCAACCATACATTGA+TGG + contig561end:25826-25845 MsG0080048952.01.T01:intron 40.0%
ACCCTAATTTCTCCTCTTCA+GGG - contig561end:14452-14471 None:intergenic 40.0%
ACCCTTCAAATGAGAGGAAA+AGG + contig561end:28694-28713 MsG0080048952.01.T01:intron 40.0%
ACCGAACTGAACCAAAGTTA+TGG + contig561end:11226-11245 MsG0080048952.01.T01:intron 40.0%
ACGTGACTTTGATGTCAACT+TGG - contig561end:16216-16235 None:intergenic 40.0%
ACTCAAATTAGGAGATGCCA+AGG - contig561end:25992-26011 None:intergenic 40.0%
ACTTCATGATGGTACAGAAC+TGG + contig561end:25353-25372 MsG0080048952.01.T01:intron 40.0%
AGAAAAATAAGCCCTCCCTA+TGG - contig561end:24375-24394 None:intergenic 40.0%
AGAAGACAATGAAGGTGGAA+AGG - contig561end:18762-18781 None:intergenic 40.0%
AGAGTTCCTCGAAAATCTTG+TGG - contig561end:21666-21685 None:intergenic 40.0%
AGCTGTTGATGTCTACACTA+TGG + contig561end:25571-25590 MsG0080048952.01.T01:CDS 40.0%
AGCTTCAATATCACCATCAC+TGG + contig561end:14425-14444 MsG0080048952.01.T01:CDS 40.0%
AGGAACATATGCTATGAAGG+TGG - contig561end:28610-28629 None:intergenic 40.0%
AGGCAGATTAATGACGATGA+CGG + contig561end:23650-23669 MsG0080048952.01.T01:CDS 40.0%
AGTCAAAATCCAAATTGCGG+CGG - contig561end:16705-16724 None:intergenic 40.0%
AGTGGGATAAACAACTCCAT+AGG - contig561end:22395-22414 None:intergenic 40.0%
ATATTAAGAGGGGAAGGCTT+TGG + contig561end:26421-26440 MsG0080048952.01.T01:intron 40.0%
ATCAATCTTATGCGGAGGTT+GGG - contig561end:21329-21348 None:intergenic 40.0%
ATCAGAGAAAAGCTGGGAAT+TGG + contig561end:15971-15990 MsG0080048952.01.T01:intron 40.0%
ATCATAGAACTGATAGAGGG+AGG + contig561end:25244-25263 MsG0080048952.01.T01:intron 40.0%
ATCATTGGAGCCACCAATAT+CGG - contig561end:26293-26312 None:intergenic 40.0%
ATGCCATTGGGGTAACTATT+TGG + contig561end:25038-25057 MsG0080048952.01.T01:intron 40.0%
ATGCGGAATTTGGGGATAAA+GGG + contig561end:15219-15238 MsG0080048952.01.T01:intron 40.0%
ATGGGCGATGAAGATTGATA+AGG - contig561end:28113-28132 None:intergenic 40.0%
ATTAAACCCCTCTCATATGG+TGG - contig561end:24767-24786 None:intergenic 40.0%
ATTCAGTAATCAGTCCAAGC+GGG - contig561end:28521-28540 None:intergenic 40.0%
ATTGAGGTGAGGCTGTATAA+TGG - contig561end:23831-23850 None:intergenic 40.0%
CAAACAATGGTTATCTCCCA+TGG + contig561end:15108-15127 MsG0080048952.01.T01:intron 40.0%
CAAACCCCTTACAATTGAAG+TGG + contig561end:11108-11127 MsG0080048952.01.T01:intron 40.0%
CAAGGGATCCTATCATCATA+TGG + contig561end:13176-13195 MsG0080048952.01.T01:intron 40.0%
CACGTCAACCATTAGATCAT+TGG - contig561end:26308-26327 None:intergenic 40.0%
CACTCATAGAACCATTCCAA+TGG + contig561end:20104-20123 MsG0080048952.01.T01:intron 40.0%
CACTTTCACTCACATTGCTA+TGG + contig561end:10775-10794 MsG0080048952.01.T01:intron 40.0%
CAGAAAGAATCATTGAGGTG+AGG - contig561end:23842-23861 None:intergenic 40.0%
CAGAAGAGAAAAATGCTCAC+TGG + contig561end:14339-14358 MsG0080048952.01.T01:CDS 40.0%
CAGCTCACAGTAGATGAAAA+AGG + contig561end:13077-13096 MsG0080048952.01.T01:intron 40.0%
CATATGATGATAGGATCCCT+TGG - contig561end:13178-13197 None:intergenic 40.0%
CATCTCAAAATCCGGATGAA+CGG + contig561end:22214-22233 MsG0080048952.01.T01:intron 40.0%
CATTTGGCACAATGTCTCTA+AGG - contig561end:9445-9464 None:intergenic 40.0%
CCAGCTTATGGGGAAAATAT+AGG - contig561end:26664-26683 None:intergenic 40.0%
CCTAGCGGCTAATTAAGATA+AGG + contig561end:10545-10564 MsG0080048952.01.T01:intron 40.0%
CCTTATCTTAATTAGCCGCT+AGG - contig561end:10548-10567 None:intergenic 40.0%
CGTAACACAATGCGGAATTT+GGG + contig561end:15210-15229 MsG0080048952.01.T01:intron 40.0%
CTACATAATGCAAGGGTTTG+AGG - contig561end:23294-23313 None:intergenic 40.0%
CTACTTCTGCAAATGCCATT+GGG + contig561end:25026-25045 MsG0080048952.01.T01:intron 40.0%
CTTAGAGACATTGTGCCAAA+TGG + contig561end:9443-9462 MsG0080048952.01.T01:exon 40.0%
CTTAGGGATGTGCAAAAATC+TGG + contig561end:16653-16672 MsG0080048952.01.T01:intron 40.0%
CTTCATGATGGTACAGAACT+GGG + contig561end:25354-25373 MsG0080048952.01.T01:intron 40.0%
CTTGTTACAACCAGCTTATG+GGG - contig561end:26674-26693 None:intergenic 40.0%
CTTTATCTCTCACAAAGTGG+CGG - contig561end:26249-26268 None:intergenic 40.0%
CTTTGAATTGTTGTCTCACG+TGG - contig561end:9857-9876 None:intergenic 40.0%
GAAAAATGCTCACTGGTCAA+TGG + contig561end:14346-14365 MsG0080048952.01.T01:CDS 40.0%
GAAAGGAGAAAGAGGAAATG+TGG - contig561end:10503-10522 None:intergenic 40.0%
GAAGAAAAGAAAGGGAAAGG+TGG + contig561end:21090-21109 MsG0080048952.01.T01:intron 40.0%
GACAAAGGAAGGAGTGAAAA+GGG - contig561end:24842-24861 None:intergenic 40.0%
GCAAGAAGCAATGCAACTTA+AGG + contig561end:13558-13577 MsG0080048952.01.T01:intron 40.0%
GCTTTACTAGACATCTGATG+TGG + contig561end:28333-28352 MsG0080048952.01.T01:intron 40.0%
GGCCAATGATCTATGCAAAT+GGG - contig561end:28740-28759 None:intergenic 40.0%
GGGCTATAATTGTCTTTGCA+TGG + contig561end:25064-25083 MsG0080048952.01.T01:intron 40.0%
GGGGAATTTCTGCACATTAA+TGG + contig561end:28393-28412 MsG0080048952.01.T01:intron 40.0%
GGTAGATTTGAATGTAACCC+TGG - contig561end:16177-16196 None:intergenic 40.0%
GGTTAACCAATGCAATGGTT+CGG + contig561end:14669-14688 MsG0080048952.01.T01:intron 40.0%
GGTTAACCGAACCATAACTT+TGG - contig561end:11240-11259 None:intergenic 40.0%
GTAACACAATGCGGAATTTG+GGG + contig561end:15211-15230 MsG0080048952.01.T01:intron 40.0%
GTATACAAGAAGCTACCATC+AGG + contig561end:18282-18301 MsG0080048952.01.T01:intron 40.0%
GTCATAAGAGTTGTCTCAAG+TGG - contig561end:9657-9676 None:intergenic 40.0%
GTGGATGCTTTGGTAAATTC+TGG + contig561end:21732-21751 MsG0080048952.01.T01:CDS 40.0%
GTTCCTGAGGTATGTATCTA+TGG + contig561end:21876-21895 MsG0080048952.01.T01:intron 40.0%
TAAAATCTTACGCACAGTGG+GGG + contig561end:24801-24820 MsG0080048952.01.T01:intron 40.0%
TAACTTGGTCAGACTCGTAT+CGG - contig561end:28286-28305 None:intergenic 40.0%
TAAGCTGGTTGTAACAAGCT+TGG + contig561end:26676-26695 MsG0080048952.01.T01:intron 40.0%
TACCGCCAACAACTCAAATT+AGG - contig561end:26003-26022 None:intergenic 40.0%
TACTTCTGCAAATGCCATTG+GGG + contig561end:25027-25046 MsG0080048952.01.T01:intron 40.0%
TACTTGAAGCCCACCTTATT+AGG + contig561end:16128-16147 MsG0080048952.01.T01:intron 40.0%
TAGTACGAAGCAGAGAAGTA+AGG - contig561end:21264-21283 None:intergenic 40.0%
TATTAAGAGGGGAAGGCTTT+GGG + contig561end:26422-26441 MsG0080048952.01.T01:intron 40.0%
TCATAGAACTGATAGAGGGA+GGG + contig561end:25245-25264 MsG0080048952.01.T01:intron 40.0%
TCCAAAAATGCCACTAAGTG+GGG + contig561end:12858-12877 MsG0080048952.01.T01:CDS 40.0%
TCCAATGTTGTTATAGGCAG+TGG - contig561end:13773-13792 None:intergenic 40.0%
TCCACTGCCTATAACAACAT+TGG + contig561end:13769-13788 MsG0080048952.01.T01:intron 40.0%
TCCATGAAACCTGATAGAGA+AGG + contig561end:18451-18470 MsG0080048952.01.T01:intron 40.0%
TCCCTGAAGAGGAGAAATTA+GGG + contig561end:14448-14467 MsG0080048952.01.T01:CDS 40.0%
TCCTCTTTCTATAGCTTTCG+CGG + contig561end:11832-11851 MsG0080048952.01.T01:intron 40.0%
TCGGACAGAAAGAATCATTG+AGG - contig561end:23847-23866 None:intergenic 40.0%
TCGTAACACAATGCGGAATT+TGG + contig561end:15209-15228 MsG0080048952.01.T01:intron 40.0%
TCGTAATGTGTGTGAGGAAA+GGG - contig561end:15252-15271 None:intergenic 40.0%
TCTACACTATGGAGTTTGAG+AGG + contig561end:25582-25601 MsG0080048952.01.T01:CDS 40.0%
TCTATTTGGAAAATGCGTCG+GGG - contig561end:9991-10010 None:intergenic 40.0%
TGAAAATTGTTCATTCCCCG+TGG + contig561end:10451-10470 MsG0080048952.01.T01:intron 40.0%
TGAGGTTGCTTGAATTTCAG+AGG + contig561end:18913-18932 MsG0080048952.01.T01:intron 40.0%
TGGAAACAGCAATTCGAGTA+AGG + contig561end:16441-16460 MsG0080048952.01.T01:intron 40.0%
TGGATTAAACCCCTCTCATA+TGG - contig561end:24770-24789 None:intergenic 40.0%
TGGATTGTGGACAATGATGA+AGG - contig561end:21996-22015 None:intergenic 40.0%
TGGCCAATGATCTATGCAAA+TGG - contig561end:28741-28760 None:intergenic 40.0%
TGGGATGAATGGAAAGATAG+AGG + contig561end:24409-24428 MsG0080048952.01.T01:intron 40.0%
TGGGTAAAAAGTTGTGGAAC+CGG + contig561end:24146-24165 MsG0080048952.01.T01:intron 40.0%
TGTGAGAGAAAAGTTGGAGA+AGG - contig561end:17291-17310 None:intergenic 40.0%
TTAAGAGGAGAAGAGAGAGT+TGG + contig561end:15701-15720 MsG0080048952.01.T01:intron 40.0%
TTATGCGAACTCTTCACCTA+AGG - contig561end:14255-14274 None:intergenic 40.0%
TTCGTGGGTGAAGATTCTTA+TGG - contig561end:23019-23038 None:intergenic 40.0%
TTCGTTAGAGATCGTATCGA+CGG + contig561end:18480-18499 MsG0080048952.01.T01:intron 40.0%
TTGATAGGAAGGATGAAAGC+AGG - contig561end:16371-16390 None:intergenic 40.0%
TTTACAACATGCTGAGACCA+TGG - contig561end:28761-28780 None:intergenic 40.0%
TTTCTATAGCTTTCGCGGTT+CGG + contig561end:11837-11856 MsG0080048952.01.T01:intron 40.0%
TTTGCATAGATCATTGGCCA+TGG + contig561end:28741-28760 MsG0080048952.01.T01:intron 40.0%
TTTGTTTGCGAGTTTGGAGA+GGG - contig561end:9421-9440 None:intergenic 40.0%
! ACAATACCAAGAGTATGCTG+GGG + contig561end:19001-19020 MsG0080048952.01.T01:intron 40.0%
! ACATATCTGTACCTGGTCTT+AGG + contig561end:16636-16655 MsG0080048952.01.T01:intron 40.0%
! ACTTGCACCTCGAATTTTGT+TGG + contig561end:18599-18618 MsG0080048952.01.T01:intron 40.0%
! AGAGAAGAGCATATCGATCA+CGG - contig561end:21767-21786 None:intergenic 40.0%
! AGTTTGACGGTGTTAAAGTG+AGG + contig561end:14921-14940 MsG0080048952.01.T01:intron 40.0%
! ATCGTGCCCATGATAATGAA+AGG - contig561end:23875-23894 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG + contig561end:26497-26516 MsG0080048952.01.T01:intron 40.0%
! CAGTTGATATGCACTTTGTG+TGG - contig561end:26808-26827 None:intergenic 40.0%
! CCTATATTTTCCCCATAAGC+TGG + contig561end:26661-26680 MsG0080048952.01.T01:intron 40.0%
! CTAGGCTAGCTATACTATGT+AGG - contig561end:23225-23244 None:intergenic 40.0%
! CTCTTTTGACCCCTAACATA+AGG + contig561end:19880-19899 MsG0080048952.01.T01:intron 40.0%
! GAACAGAGCATCAAAGTTAG+GGG - contig561end:14757-14776 None:intergenic 40.0%
! GACAATACCAAGAGTATGCT+GGG + contig561end:19000-19019 MsG0080048952.01.T01:intron 40.0%
! GCCTTTTCCTCTCATTTGAA+GGG - contig561end:28698-28717 None:intergenic 40.0%
! GCTTGTTACAACCAGCTTAT+GGG - contig561end:26675-26694 None:intergenic 40.0%
! GTGAAATAGAAGGTGCGTTT+AGG - contig561end:16740-16759 None:intergenic 40.0%
! GTGAAGAGCAAGTTTTCTGT+TGG + contig561end:24018-24037 MsG0080048952.01.T01:intron 40.0%
! GTTTGACGGTGTTAAAGTGA+GGG + contig561end:14922-14941 MsG0080048952.01.T01:intron 40.0%
! TGACAATACCAAGAGTATGC+TGG + contig561end:18999-19018 MsG0080048952.01.T01:intron 40.0%
! TGCCTTTTCCTCTCATTTGA+AGG - contig561end:28699-28718 None:intergenic 40.0%
! TTGTTTTCTCAAAGTCCACG+GGG - contig561end:10469-10488 None:intergenic 40.0%
! TTTGACGGTGTTAAAGTGAG+GGG + contig561end:14923-14942 MsG0080048952.01.T01:intron 40.0%
!! AACTGGATAACGGAGAAGAA+GGG - contig561end:28168-28187 None:intergenic 40.0%
!! AATGGTCTCTGAAGTAGAAG+TGG + contig561end:14308-14327 MsG0080048952.01.T01:intron 40.0%
!! AGCAGAGTATTGTGCTATTG+TGG + contig561end:26078-26097 MsG0080048952.01.T01:intron 40.0%
!! AGCTTGTTACAACCAGCTTA+TGG - contig561end:26676-26695 None:intergenic 40.0%
!! ATGGTCTCTGAAGTAGAAGT+GGG + contig561end:14309-14328 MsG0080048952.01.T01:intron 40.0%
!! ATTGTTGAGTTGGGTAGTGT+TGG - contig561end:15387-15406 None:intergenic 40.0%
!! CAGACTAGTCTTGTAGTCTT+AGG - contig561end:13744-13763 None:intergenic 40.0%
!! CATATCTGTACCTGGTCTTA+GGG + contig561end:16637-16656 MsG0080048952.01.T01:intron 40.0%
!! CATGGAGTTTTTGTTGATGG+AGG - contig561end:23174-23193 None:intergenic 40.0%
!! CTCCTAATTTGAGTTGTTGG+CGG + contig561end:25998-26017 MsG0080048952.01.T01:intron 40.0%
!! TGTGGGCATGTTTTTGTTTC+TGG - contig561end:14116-14135 None:intergenic 40.0%
!! TTGGTTGCCAACGGTTTTAT+TGG + contig561end:15827-15846 MsG0080048952.01.T01:intron 40.0%
!! TTGTTGAGTTGGGTAGTGTT+GGG - contig561end:15386-15405 None:intergenic 40.0%
!! TTTTGTTTGCGAGTTTGGAG+AGG - contig561end:9422-9441 None:intergenic 40.0%
!! TTTTTGGTGACTGAGAGTGT+CGG - contig561end:15300-15319 None:intergenic 40.0%
!!! AGTGTTTTGAGGACAAAGGA+AGG - contig561end:24853-24872 None:intergenic 40.0%
!!! CTACTGTGGAGTTTTTTGGT+AGG - contig561end:13967-13986 None:intergenic 40.0%
!!! GAGGTATCCTTCACCTTTTT+TGG + contig561end:24428-24447 MsG0080048952.01.T01:intron 40.0%
!!! GCGATTATGACCCCTTTTTT+GGG + contig561end:19942-19961 MsG0080048952.01.T01:intron 40.0%
!!! GGTTTTGTTTGCAAGTTTGG+TGG + contig561end:26344-26363 MsG0080048952.01.T01:intron 40.0%
!!! TGCGATTATGACCCCTTTTT+TGG + contig561end:19941-19960 MsG0080048952.01.T01:intron 40.0%
!!! TGTGGAGTTTTTTGGTAGGA+TGG - contig561end:13963-13982 None:intergenic 40.0%
AAAATGCCACTAAGTGGGGT+CGG + contig561end:12862-12881 MsG0080048952.01.T01:intron 45.0%
AACCGCAAAATCACAGGATG+CGG + contig561end:15857-15876 MsG0080048952.01.T01:intron 45.0%
AATCTTCTCCCTGTATAGGG+AGG + contig561end:24553-24572 MsG0080048952.01.T01:intron 45.0%
AATTACAGAGGCCAGCTCAT+AGG - contig561end:16086-16105 None:intergenic 45.0%
AATTAGCCGCTAGGGAAAGA+AGG - contig561end:10539-10558 None:intergenic 45.0%
ACCGCGAAAGCTATAGAAAG+AGG - contig561end:11836-11855 None:intergenic 45.0%
ACTGCACACCTCAATTACAG+AGG - contig561end:16098-16117 None:intergenic 45.0%
AGAAGGCAATTAGCTCAGCT+AGG + contig561end:21807-21826 MsG0080048952.01.T01:CDS 45.0%
AGAGAGGAATAAGCAAGCAG+AGG + contig561end:21710-21729 MsG0080048952.01.T01:CDS 45.0%
AGATGTCTCCAGCAGAGATA+GGG + contig561end:16054-16073 MsG0080048952.01.T01:intron 45.0%
AGGTATCCTGCATAATGCAG+AGG - contig561end:28913-28932 None:intergenic 45.0%
ATACCTCAGGAACTCCAACA+AGG - contig561end:21869-21888 None:intergenic 45.0%
ATCTTCTCCCTGTATAGGGA+GGG + contig561end:24554-24573 MsG0080048952.01.T01:intron 45.0%
ATGAAAGCAGGAGCTGGTAA+AGG - contig561end:16359-16378 None:intergenic 45.0%
ATGTGAACCCTTGTAAACGG+TGG - contig561end:18420-18439 None:intergenic 45.0%
ATGTGTGTGAGGAAAGGGTA+TGG - contig561end:15247-15266 None:intergenic 45.0%
ATTAAGAGGGGAAGGCTTTG+GGG + contig561end:26423-26442 MsG0080048952.01.T01:intron 45.0%
ATTCGAGAGGGATCGATGAA+TGG + contig561end:21032-21051 MsG0080048952.01.T01:intron 45.0%
CAACAGTGGACGAAAATGCT+CGG - contig561end:10816-10835 None:intergenic 45.0%
CATCAATCTTATGCGGAGGT+TGG - contig561end:21330-21349 None:intergenic 45.0%
CATTGGAACAAGTGAACTGC+CGG - contig561end:24178-24197 None:intergenic 45.0%
CCAAAACCTTCTTTCCCTAG+CGG + contig561end:10530-10549 MsG0080048952.01.T01:intron 45.0%
CCAATGGCATTTGCAGAAGT+AGG - contig561end:25028-25047 None:intergenic 45.0%
CCTACTTCTGCAAATGCCAT+TGG + contig561end:25025-25044 MsG0080048952.01.T01:intron 45.0%
CTACTGTCGTAATGTGTGTG+AGG - contig561end:15258-15277 None:intergenic 45.0%
CTGGATTACATTACCGTGTC+TGG - contig561end:21417-21436 None:intergenic 45.0%
GAACTTCTGCCTTCTCTATC+AGG - contig561end:18463-18482 None:intergenic 45.0%
GACTGAAACATCGACATCCA+GGG + contig561end:16157-16176 MsG0080048952.01.T01:intron 45.0%
GCAGAAGAGTGAATTGAGTG+AGG + contig561end:14395-14414 MsG0080048952.01.T01:intron 45.0%
GCAGACATCTTCTCTCAACA+AGG + contig561end:12199-12218 MsG0080048952.01.T01:intron 45.0%
GCCTTCTCTATCAGGTTTCA+TGG - contig561end:18455-18474 None:intergenic 45.0%
GGACAAAGGAAGGAGTGAAA+AGG - contig561end:24843-24862 None:intergenic 45.0%
GGAGGGGTTTGGAAAAAAGA+AGG + contig561end:26377-26396 MsG0080048952.01.T01:intron 45.0%
GGCAGATTAATGACGATGAC+GGG + contig561end:23651-23670 MsG0080048952.01.T01:CDS 45.0%
GGCGATAACATATCTGTACC+TGG + contig561end:16629-16648 MsG0080048952.01.T01:intron 45.0%
GGGGAAGCCTCTATAAATCT+TGG - contig561end:19478-19497 None:intergenic 45.0%
GTAGAAGCAGCCATCGAAAT+CGG - contig561end:21151-21170 None:intergenic 45.0%
GTCCCTGAAGAGGAGAAATT+AGG + contig561end:14447-14466 MsG0080048952.01.T01:CDS 45.0%
GTCGTAATGTGTGTGAGGAA+AGG - contig561end:15253-15272 None:intergenic 45.0%
GTGATCGATATGCTCTTCTC+TGG + contig561end:21766-21785 MsG0080048952.01.T01:CDS 45.0%
GTTTAGATGGAGGGTTTGGA+GGG - contig561end:24348-24367 None:intergenic 45.0%
GTTTGTCGTAGTAAGACGAC+AGG - contig561end:21204-21223 None:intergenic 45.0%
TACTAGCATGACCTAGAGAC+CGG - contig561end:15338-15357 None:intergenic 45.0%
TCAGGGCTGTAATGTAGCTA+AGG + contig561end:22339-22358 MsG0080048952.01.T01:intron 45.0%
TCATCGCACTTTGACCACTT+TGG + contig561end:21584-21603 MsG0080048952.01.T01:CDS 45.0%
TCCCAACTGAGTCACAAACA+CGG + contig561end:24883-24902 MsG0080048952.01.T01:intron 45.0%
TCCTCTGATTCCGATTTCGA+TGG + contig561end:21138-21157 MsG0080048952.01.T01:intron 45.0%
TCTATGAAGGAAGGGATAGG+AGG + contig561end:29016-29035 MsG0080048952.01.T01:exon 45.0%
TCTCTTCATTCCTCCTTCCT+TGG + contig561end:23452-23471 MsG0080048952.01.T01:intron 45.0%
TCTGTAATTGAGGTGTGCAG+TGG + contig561end:16097-16116 MsG0080048952.01.T01:intron 45.0%
TGAAAGCAGGAGCTGGTAAA+GGG - contig561end:16358-16377 None:intergenic 45.0%
TGACTGAAACATCGACATCC+AGG + contig561end:16156-16175 MsG0080048952.01.T01:intron 45.0%
TGAGCCTGAAATGAGAGAAG+AGG + contig561end:26826-26845 MsG0080048952.01.T01:intron 45.0%
TGCATTGCAGTTGGAAGGAA+GGG + contig561end:11060-11079 MsG0080048952.01.T01:intron 45.0%
TGGAGTTCCACCATATGAGA+GGG + contig561end:24757-24776 MsG0080048952.01.T01:intron 45.0%
TGGTGGCTCCAATGATCTAA+TGG + contig561end:26297-26316 MsG0080048952.01.T01:intron 45.0%
TGTCGCATGTTATGTGCAAC+AGG - contig561end:27635-27654 None:intergenic 45.0%
TGTGAGTTACCTCGCATCTT+TGG + contig561end:23910-23929 MsG0080048952.01.T01:intron 45.0%
TGTTTAGATGGAGGGTTTGG+AGG - contig561end:24349-24368 None:intergenic 45.0%
TTCATTCCAGCAGATGTTGC+TGG + contig561end:27385-27404 MsG0080048952.01.T01:CDS 45.0%
TTCGAGAGGGATCGATGAAT+GGG + contig561end:21033-21052 MsG0080048952.01.T01:intron 45.0%
TTCGTAACTGCGGAAACCAA+AGG - contig561end:16765-16784 None:intergenic 45.0%
TTGATTGGATTCGAGCTGTC+AGG + contig561end:25172-25191 MsG0080048952.01.T01:intron 45.0%
TTGCGATTCATGTGCTTAGC+TGG - contig561end:22245-22264 None:intergenic 45.0%
TTGCTGGTGCAGTGGAAATA+AGG + contig561end:27401-27420 MsG0080048952.01.T01:CDS 45.0%
TTGGAGTTCCACCATATGAG+AGG + contig561end:24756-24775 MsG0080048952.01.T01:intron 45.0%
TTGGAGTTTGCAAGTCCTAC+CGG + contig561end:28013-28032 MsG0080048952.01.T01:CDS 45.0%
TTTGGAGGGAGAGATGGTAA+GGG - contig561end:24334-24353 None:intergenic 45.0%
TTTGTGACTCAGTTGGGACA+TGG - contig561end:24881-24900 None:intergenic 45.0%
! AAACCGAACCGTTTCAGGTA+TGG + contig561end:11198-11217 MsG0080048952.01.T01:intron 45.0%
! AATACCAAGAGTATGCTGGG+GGG + contig561end:19003-19022 MsG0080048952.01.T01:intron 45.0%
! ACCCCACTTAGTGGCATTTT+TGG - contig561end:12862-12881 None:intergenic 45.0%
! ACCTCAAAAGTTTTCCCAGC+TGG - contig561end:27529-27548 None:intergenic 45.0%
! ACTGTAGGTGCTACGGTATA+AGG + contig561end:28823-28842 MsG0080048952.01.T01:intron 45.0%
! AGAGCATCAAAGTTAGGGGT+GGG - contig561end:14753-14772 None:intergenic 45.0%
! AGCTGGATTTTCCGTTCATC+CGG - contig561end:22228-22247 None:intergenic 45.0%
! AGGCTTTATCAAAGTCCACG+TGG - contig561end:15889-15908 None:intergenic 45.0%
! ATAGGAGGTGTAAAGGAGCT+TGG + contig561end:29031-29050 MsG0080048952.01.T01:exon 45.0%
! ATTTGAAGCAGATGGCATGC+TGG - contig561end:24097-24116 None:intergenic 45.0%
! CAATACCAAGAGTATGCTGG+GGG + contig561end:19002-19021 MsG0080048952.01.T01:intron 45.0%
! CTGTGTTTCTGTTGCGGAAT+TGG - contig561end:13397-13416 None:intergenic 45.0%
! CTTACAATCTTTTCCCCGGT+AGG - contig561end:28031-28050 None:intergenic 45.0%
! CTTTTGGACACAAGAGTCTG+AGG + contig561end:18895-18914 MsG0080048952.01.T01:intron 45.0%
! GCGTCTTCTCAGCAATTTTG+GGG + contig561end:19972-19991 MsG0080048952.01.T01:intron 45.0%
! GGCGTCTTCTCAGCAATTTT+GGG + contig561end:19971-19990 MsG0080048952.01.T01:intron 45.0%
! GGTTAGCTCCATACCTGAAA+CGG - contig561end:11209-11228 None:intergenic 45.0%
! GTATTGACCATGACACGAGT+GGG + contig561end:15407-15426 MsG0080048952.01.T01:intron 45.0%
! GTGGACTATGTGACGTCAAA+TGG - contig561end:22294-22313 None:intergenic 45.0%
! TCCAACAAGGTACTTGACGA+GGG - contig561end:21856-21875 None:intergenic 45.0%
! TCCAGCTGGGAAAACTTTTG+AGG + contig561end:27525-27544 MsG0080048952.01.T01:CDS 45.0%
! TGGCGTCTTCTCAGCAATTT+TGG + contig561end:19970-19989 MsG0080048952.01.T01:intron 45.0%
! TGTATTGACCATGACACGAG+TGG + contig561end:15406-15425 MsG0080048952.01.T01:intron 45.0%
! TTCATCGAAGTGGAAGTGTG+TGG - contig561end:13046-13065 None:intergenic 45.0%
! TTTGCAAGTTTGGTGGGGAA+GGG + contig561end:26351-26370 MsG0080048952.01.T01:intron 45.0%
! TTTTGCACATCCCTAAGACC+AGG - contig561end:16650-16669 None:intergenic 45.0%
!! AGTAGTCAGTGCTACTTCTG+AGG - contig561end:18699-18718 None:intergenic 45.0%
!! CGGTTCGGTTTAGTTTGCTT+CGG + contig561end:11852-11871 MsG0080048952.01.T01:intron 45.0%
!! CGTTCATCCGGATTTTGAGA+TGG - contig561end:22216-22235 None:intergenic 45.0%
!! GAACTGGATAACGGAGAAGA+AGG - contig561end:28169-28188 None:intergenic 45.0%
!! TATGGTTCGGTTCGGTTAAC+CGG + contig561end:14702-14721 MsG0080048952.01.T01:intron 45.0%
!! TCACAAGAGCGCACATCTTT+TGG + contig561end:11939-11958 MsG0080048952.01.T01:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+TGG + contig561end:26501-26520 MsG0080048952.01.T01:intron 45.0%
!!! TCAGCAATTTTGGGGCGAAA+GGG + contig561end:19980-19999 MsG0080048952.01.T01:intron 45.0%
!!! TCGGTTCGGTTCGGTTTTTT+AGG - contig561end:11158-11177 None:intergenic 45.0%
!! ATATTAACAAAAAAAATATA+GGG + contig561end:19759-19778 MsG0080048952.01.T01:intron 5.0%
!! ATTTATTCTTTAATATTTAT+TGG + contig561end:11628-11647 MsG0080048952.01.T01:intron 5.0%
!! TAATAAGAAAAAAAATATTA+AGG + contig561end:20590-20609 MsG0080048952.01.T01:intron 5.0%
!! TATATTAACAAAAAAAATAT+AGG + contig561end:19758-19777 MsG0080048952.01.T01:intron 5.0%
!!! AATAACTTTTAATAAATAAT+TGG + contig561end:27183-27202 MsG0080048952.01.T01:intron 5.0%
!!! TATTTTTTTTGTTAATATAT+AGG - contig561end:19757-19776 None:intergenic 5.0%
!!! TTGAAATTTTTTAATTTTTT+GGG - contig561end:17515-17534 None:intergenic 5.0%
AACAACGTGAACGCTCAGAG+AGG + contig561end:21694-21713 MsG0080048952.01.T01:CDS 50.0%
AACGGTCAGCCATAATGGTG+AGG + contig561end:16000-16019 MsG0080048952.01.T01:intron 50.0%
ACCAGTGCATTGCAGTTGGA+AGG + contig561end:11055-11074 MsG0080048952.01.T01:intron 50.0%
ACCCCTAGCGAAGACGAAAA+GGG - contig561end:19498-19517 None:intergenic 50.0%
ACCCTCGTCAAGTACCTTGT+TGG + contig561end:21852-21871 MsG0080048952.01.T01:CDS 50.0%
ACGCCACGTGTCCCAAAAAA+GGG - contig561end:19956-19975 None:intergenic 50.0%
ACGGTCAGCCATAATGGTGA+GGG + contig561end:16001-16020 MsG0080048952.01.T01:intron 50.0%
ACTAGCATGACCTAGAGACC+GGG - contig561end:15337-15356 None:intergenic 50.0%
ACTGGTCAATGGTTGCTGGT+CGG + contig561end:14357-14376 MsG0080048952.01.T01:intron 50.0%
AGAAGGCCTCTGCATTATGC+AGG + contig561end:28904-28923 MsG0080048952.01.T01:exon 50.0%
AGCGGTTGAGGTTTGAACTC+CGG + contig561end:20719-20738 MsG0080048952.01.T01:intron 50.0%
AGCGTTCACGTTGTTGTCTG+AGG - contig561end:21689-21708 None:intergenic 50.0%
AGGGGAACAGTTAGCTGTCT+TGG + contig561end:25544-25563 MsG0080048952.01.T01:CDS 50.0%
AGTCACGCTCTTATGTGGTG+AGG + contig561end:18516-18535 MsG0080048952.01.T01:intron 50.0%
AGTTTGGAGAGGGAAGCCTT+TGG - contig561end:9411-9430 None:intergenic 50.0%
ATCTCTTCCGGTGAGACCAA+GGG - contig561end:16038-16057 None:intergenic 50.0%
CAACCTCACCCTCACCATTA+TGG - contig561end:16012-16031 None:intergenic 50.0%
CAGTATACACCGCCGCAATT+TGG + contig561end:16693-16712 MsG0080048952.01.T01:intron 50.0%
CTACACCAGTGCATTGCAGT+TGG + contig561end:11051-11070 MsG0080048952.01.T01:intron 50.0%
CTTATCTACTGGTAGGCCCA+TGG + contig561end:23779-23798 MsG0080048952.01.T01:intron 50.0%
GAAGTAAGGTGAGAGACGTC+TGG - contig561end:21250-21269 None:intergenic 50.0%
GACAGGAAGGCCCTAGTTAT+GGG - contig561end:21187-21206 None:intergenic 50.0%
GAGAAAGAGGAGGAGTGAAG+GGG - contig561end:21228-21247 None:intergenic 50.0%
GAGATGTCTCCAGCAGAGAT+AGG + contig561end:16053-16072 MsG0080048952.01.T01:intron 50.0%
GAGCAAACGGTCAGCCATAA+TGG + contig561end:15995-16014 MsG0080048952.01.T01:intron 50.0%
GAGGAATAAGCAAGCAGAGG+TGG + contig561end:21713-21732 MsG0080048952.01.T01:CDS 50.0%
GAGGTGAGGCTGTATAATGG+TGG - contig561end:23828-23847 None:intergenic 50.0%
GCACAAAGAGAGACGACAGA+GGG - contig561end:25506-25525 None:intergenic 50.0%
GCCATCGAAATCGGAATCAG+AGG - contig561end:21142-21161 None:intergenic 50.0%
GCCGTGTTTGTGACTCAGTT+GGG - contig561end:24887-24906 None:intergenic 50.0%
GCTCCATACCTGAAACGGTT+CGG - contig561end:11204-11223 None:intergenic 50.0%
GCTGGGAATTGGAGAGCAAA+CGG + contig561end:15982-16001 MsG0080048952.01.T01:intron 50.0%
GGAGAAAGAGGAGGAGTGAA+GGG - contig561end:21229-21248 None:intergenic 50.0%
GGAGTTCCACCATATGAGAG+GGG + contig561end:24758-24777 MsG0080048952.01.T01:intron 50.0%
GGGATGTGCAAAAATCTGGC+TGG + contig561end:16657-16676 MsG0080048952.01.T01:intron 50.0%
GTACCTTGTTGGAGTTCCTG+AGG + contig561end:21863-21882 MsG0080048952.01.T01:CDS 50.0%
GTCGTAGTAAGACGACAGGA+AGG - contig561end:21200-21219 None:intergenic 50.0%
GTGCATTGCAGTTGGAAGGA+AGG + contig561end:11059-11078 MsG0080048952.01.T01:intron 50.0%
GTTGAATCCCTTGGTCTCAC+CGG + contig561end:16028-16047 MsG0080048952.01.T01:intron 50.0%
GTTGTGGAACCGGACAAAAC+CGG + contig561end:24156-24175 MsG0080048952.01.T01:intron 50.0%
GTTTGGAGGGAGAGATGGTA+AGG - contig561end:24335-24354 None:intergenic 50.0%
TACCCCTAGCGAAGACGAAA+AGG - contig561end:19499-19518 None:intergenic 50.0%
TAGGGAGTTCACCTATGAGC+TGG + contig561end:16072-16091 MsG0080048952.01.T01:intron 50.0%
TATCAGCCTGCAGCATGCAA+AGG + contig561end:22369-22388 MsG0080048952.01.T01:intron 50.0%
TCAACCTAACTCTGCTGCCA+AGG - contig561end:23472-23491 None:intergenic 50.0%
TCCTTCCAACTGCAATGCAC+TGG - contig561end:11059-11078 None:intergenic 50.0%
TCGAGAGGGATCGATGAATG+GGG + contig561end:21034-21053 MsG0080048952.01.T01:intron 50.0%
TCGATGGCTGCTTCTACAGA+GGG + contig561end:21154-21173 MsG0080048952.01.T01:intron 50.0%
TCTGCTGGAGACATCTCTTC+CGG - contig561end:16050-16069 None:intergenic 50.0%
TGACTCAGTTGGGACATGGA+GGG - contig561end:24877-24896 None:intergenic 50.0%
TGAGAGACGTCTGGAGAAAG+AGG - contig561end:21241-21260 None:intergenic 50.0%
TGCACAAAGAGAGACGACAG+AGG - contig561end:25507-25526 None:intergenic 50.0%
TGCGAAGCCACCGTTTACAA+GGG + contig561end:18410-18429 MsG0080048952.01.T01:intron 50.0%
TGCTGGGGGGATAACGTTTA+TGG + contig561end:19016-19035 MsG0080048952.01.T01:intron 50.0%
TGGACTTTGTGGGCATGGTT+CGG + contig561end:11128-11147 MsG0080048952.01.T01:intron 50.0%
TGGAGAAAGAGGAGGAGTGA+AGG - contig561end:21230-21249 None:intergenic 50.0%
TGGAGTTTGCAAGTCCTACC+GGG + contig561end:28014-28033 MsG0080048952.01.T01:CDS 50.0%
TTATCCCCCCAGCATACTCT+TGG - contig561end:19010-19029 None:intergenic 50.0%
TTCGATGGCTGCTTCTACAG+AGG + contig561end:21153-21172 MsG0080048952.01.T01:intron 50.0%
TTGCATCAGTCGAATGGCAC+TGG - contig561end:28875-28894 None:intergenic 50.0%
TTGGCACTCTTGGTTGCCAA+CGG + contig561end:15818-15837 MsG0080048952.01.T01:intron 50.0%
TTTCTTCACACCCGGTCTCT+AGG + contig561end:15324-15343 MsG0080048952.01.T01:intron 50.0%
! AATGGAAGGGGATGGCTTTG+AGG - contig561end:9346-9365 None:intergenic 50.0%
! AGGGGGCTATTTGAAGCAGA+TGG - contig561end:24105-24124 None:intergenic 50.0%
! CAGAGCATCAAAGTTAGGGG+TGG - contig561end:14754-14773 None:intergenic 50.0%
! CCGCTAGGGAAAGAAGGTTT+TGG - contig561end:10533-10552 None:intergenic 50.0%
! CTCCAACAAGGTACTTGACG+AGG - contig561end:21857-21876 None:intergenic 50.0%
! CTCCGCATCCTGTGATTTTG+CGG - contig561end:15862-15881 None:intergenic 50.0%
! GGAAGGGATAGGAGGTGTAA+AGG + contig561end:29024-29043 MsG0080048952.01.T01:exon 50.0%
! GTTTGCAAGTTTGGTGGGGA+AGG + contig561end:26350-26369 MsG0080048952.01.T01:intron 50.0%
! TCCCCTTTTCGTCTTCGCTA+GGG + contig561end:19493-19512 MsG0080048952.01.T01:intron 50.0%
! TGAAGTGGACTTTGTGGGCA+TGG + contig561end:11123-11142 MsG0080048952.01.T01:intron 50.0%
! TGACTTGGATCGGATCGGAT+CGG - contig561end:11893-11912 None:intergenic 50.0%
! TGAGCTGGCCTCTGTAATTG+AGG + contig561end:16087-16106 MsG0080048952.01.T01:intron 50.0%
! TTAAGAGGGGAAGGCTTTGG+GGG + contig561end:26424-26443 MsG0080048952.01.T01:intron 50.0%
! TTCCCCTTTTCGTCTTCGCT+AGG + contig561end:19492-19511 MsG0080048952.01.T01:intron 50.0%
!! AGGGTTTGGTGCCCATAACT+AGG + contig561end:21173-21192 MsG0080048952.01.T01:intron 50.0%
!! ATGGAAGGGGATGGCTTTGA+GGG - contig561end:9345-9364 None:intergenic 50.0%
!! GGGTTTGGTGCCCATAACTA+GGG + contig561end:21174-21193 MsG0080048952.01.T01:intron 50.0%
!! TTCGGTTCGGTTCGGTTCAT+AGG - contig561end:11272-11291 None:intergenic 50.0%
!!! ACATGGAGGGGAGTGTTTTG+AGG - contig561end:24864-24883 None:intergenic 50.0%
!!! AGTGAACTGCCGGTTTTGTC+CGG - contig561end:24168-24187 None:intergenic 50.0%
!!! CAGCAATTTTGGGGCGAAAG+GGG + contig561end:19981-20000 MsG0080048952.01.T01:intron 50.0%
!!! CTCAGCAATTTTGGGGCGAA+AGG + contig561end:19979-19998 MsG0080048952.01.T01:intron 50.0%
!!! GGGGAGTGTTTTGAGGACAA+AGG - contig561end:24857-24876 None:intergenic 50.0%
!!! GGTTTTGGTTCGGTTCGGTT+CGG - contig561end:11280-11299 None:intergenic 50.0%
AACTCTGCTGCCAAGGAAGG+AGG - contig561end:23465-23484 None:intergenic 55.0%
AATCTTACGCACAGTGGGGG+TGG + contig561end:24804-24823 MsG0080048952.01.T01:intron 55.0%
ACACGCTTCTTGGGTGACGT+AGG + contig561end:10013-10032 MsG0080048952.01.T01:intron 55.0%
ACCATCACTGGTCCCTGAAG+AGG + contig561end:14437-14456 MsG0080048952.01.T01:CDS 55.0%
ACGGTGGCTTCGCACCATAA+AGG - contig561end:18404-18423 None:intergenic 55.0%
ACTGCACCAGCAACATCTGC+TGG - contig561end:27394-27413 None:intergenic 55.0%
AGCAGATGTTGCTGGTGCAG+TGG + contig561end:27393-27412 MsG0080048952.01.T01:CDS 55.0%
AGGCTGTGAGCAGACACACA+GGG - contig561end:25390-25409 None:intergenic 55.0%
ATCTACTGGTAGGCCCATGG+AGG + contig561end:23782-23801 MsG0080048952.01.T01:intron 55.0%
ATCTTACGCACAGTGGGGGT+GGG + contig561end:24805-24824 MsG0080048952.01.T01:intron 55.0%
ATGGTTGCTGGTCGGTGAAG+TGG + contig561end:14365-14384 MsG0080048952.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - contig561end:12871-12890 None:intergenic 55.0%
CAGCCATAATGGTGAGGGTG+AGG + contig561end:16006-16025 MsG0080048952.01.T01:intron 55.0%
CATAGGCCTTTGCATGCTGC+AGG - contig561end:22378-22397 None:intergenic 55.0%
CATCTCTTCCGGTGAGACCA+AGG - contig561end:16039-16058 None:intergenic 55.0%
CCCCTAGCGAAGACGAAAAG+GGG - contig561end:19497-19516 None:intergenic 55.0%
CCTAACTCTGCTGCCAAGGA+AGG - contig561end:23468-23487 None:intergenic 55.0%
CCTTCCTTGGCAGCAGAGTT+AGG + contig561end:23465-23484 MsG0080048952.01.T01:intron 55.0%
CGACAGGAAGGCCCTAGTTA+TGG - contig561end:21188-21207 None:intergenic 55.0%
CGCAAAATCACAGGATGCGG+AGG + contig561end:15860-15879 MsG0080048952.01.T01:intron 55.0%
CGCCACGTGTCCCAAAAAAG+GGG - contig561end:19955-19974 None:intergenic 55.0%
CGGGAAAACCGAACCGTTTC+AGG + contig561end:11193-11212 MsG0080048952.01.T01:intron 55.0%
CTGCAGCATGCAAAGGCCTA+TGG + contig561end:22376-22395 MsG0080048952.01.T01:intron 55.0%
CTTGGTCAGACTCGTATCGG+CGG - contig561end:28283-28302 None:intergenic 55.0%
GACGCCACGTGTCCCAAAAA+AGG - contig561end:19957-19976 None:intergenic 55.0%
GACTCAGTTGGGACATGGAG+GGG - contig561end:24876-24895 None:intergenic 55.0%
GAGACGTCTGGAGAAAGAGG+AGG - contig561end:21238-21257 None:intergenic 55.0%
GAGGGTGAGGTTGAATCCCT+TGG + contig561end:16019-16038 MsG0080048952.01.T01:intron 55.0%
GCAAGCAGAGGTGGATGCTT+TGG + contig561end:21722-21741 MsG0080048952.01.T01:CDS 55.0%
GCTCACTGGTCAATGGTTGC+TGG + contig561end:14353-14372 MsG0080048952.01.T01:intron 55.0%
GGAAGGATGAAAGCAGGAGC+TGG - contig561end:16365-16384 None:intergenic 55.0%
GGACTCGATAGGAGAGTCGA+TGG + contig561end:18354-18373 MsG0080048952.01.T01:intron 55.0%
GGAGTTTGCAAGTCCTACCG+GGG + contig561end:28015-28034 MsG0080048952.01.T01:CDS 55.0%
GGATTCGAGCTGTCAGGTTC+AGG + contig561end:25178-25197 MsG0080048952.01.T01:intron 55.0%
GGCCGTGTTTGTGACTCAGT+TGG - contig561end:24888-24907 None:intergenic 55.0%
GGCTGCTTCTACAGAGGGTT+TGG + contig561end:21159-21178 MsG0080048952.01.T01:intron 55.0%
GGTGAACTCCCTATCTCTGC+TGG - contig561end:16065-16084 None:intergenic 55.0%
GTGACTCAGTTGGGACATGG+AGG - contig561end:24878-24897 None:intergenic 55.0%
GTGCGAAGCCACCGTTTACA+AGG + contig561end:18409-18428 MsG0080048952.01.T01:intron 55.0%
TCCTCTTCAGGGACCAGTGA+TGG - contig561end:14441-14460 None:intergenic 55.0%
TGAGTCACAAACACGGCCCA+AGG + contig561end:24890-24909 MsG0080048952.01.T01:intron 55.0%
TGGTTGCTGGTCGGTGAAGT+GGG + contig561end:14366-14385 MsG0080048952.01.T01:intron 55.0%
TGTCTGCTCACAGCCTCTAG+AGG + contig561end:25394-25413 MsG0080048952.01.T01:intron 55.0%
TTGGTTCACTTGCAGCAGCC+TGG + contig561end:11773-11792 MsG0080048952.01.T01:intron 55.0%
! AAGTTTGGTGGGGAAGGGAG+GGG + contig561end:26356-26375 MsG0080048952.01.T01:intron 55.0%
! CAAGTTTGGTGGGGAAGGGA+GGG + contig561end:26355-26374 MsG0080048952.01.T01:intron 55.0%
! CCCCTTTTCGTCTTCGCTAG+GGG + contig561end:19494-19513 MsG0080048952.01.T01:intron 55.0%
! GTGCGTTTAGGGTTTGCGAG+AGG - contig561end:16728-16747 None:intergenic 55.0%
! TCAGACTCGTATCGGCGGTA+AGG - contig561end:28278-28297 None:intergenic 55.0%
!! AATGGCACTGGCTCTGCAAC+AGG - contig561end:28863-28882 None:intergenic 55.0%
!! ACTGAGAGTGTCGGTGCTTG+GGG - contig561end:15291-15310 None:intergenic 55.0%
!! CACAGTGGTAACGGGATGCT+TGG + contig561end:16250-16269 MsG0080048952.01.T01:intron 55.0%
!! GACTGAGAGTGTCGGTGCTT+GGG - contig561end:15292-15311 None:intergenic 55.0%
!! GAGCTGGCTCGGTTTCGATT+TGG - contig561end:24061-24080 None:intergenic 55.0%
!! TAAGAGGGGAAGGCTTTGGG+GGG + contig561end:26425-26444 MsG0080048952.01.T01:intron 55.0%
!! TGACTGAGAGTGTCGGTGCT+TGG - contig561end:15293-15312 None:intergenic 55.0%
!! TGGAAGGGGATGGCTTTGAG+GGG - contig561end:9344-9363 None:intergenic 55.0%
!!! GACCCCTTTTTTGGGACACG+TGG + contig561end:19950-19969 MsG0080048952.01.T01:intron 55.0%
AGGATGCGGAGGAATCCACG+TGG + contig561end:15871-15890 MsG0080048952.01.T01:intron 60.0%
CGATGACGCTGCTCCTCCAT+GGG - contig561end:23798-23817 None:intergenic 60.0%
GAGGAGCAGCGTCATCGCTA+TGG + contig561end:23801-23820 MsG0080048952.01.T01:CDS 60.0%
GAGGCTGTGAGCAGACACAC+AGG - contig561end:25391-25410 None:intergenic 60.0%
GCTCAGCTAGGCTCTGCAAC+AGG + contig561end:21819-21838 MsG0080048952.01.T01:CDS 60.0%
GGAGGGTTTGGAGGGAGAGA+TGG - contig561end:24340-24359 None:intergenic 60.0%
TCGAAACCGAGCCAGCTCGT+TGG + contig561end:24063-24082 MsG0080048952.01.T01:intron 60.0%
TCTTACGCACAGTGGGGGTG+GGG + contig561end:24806-24825 MsG0080048952.01.T01:intron 60.0%
TGGTTCCTGGTCCAACGAGC+TGG - contig561end:24077-24096 None:intergenic 60.0%
! GCAAGTTTGGTGGGGAAGGG+AGG + contig561end:26354-26373 MsG0080048952.01.T01:intron 60.0%
!! GCAGATGGCATGCTGGTTCC+TGG - contig561end:24090-24109 None:intergenic 60.0%
CCTGGTCCAACGAGCTGGCT+CGG - contig561end:24072-24091 None:intergenic 65.0%
CTTACGCACAGTGGGGGTGG+GGG + contig561end:24807-24826 MsG0080048952.01.T01:intron 65.0%
GCGATGACGCTGCTCCTCCA+TGG - contig561end:23799-23818 None:intergenic 65.0%
GGCTCAGCCCACTCGTGTCA+TGG - contig561end:15417-15436 None:intergenic 65.0%
TTACGCACAGTGGGGGTGGG+GGG + contig561end:24808-24827 MsG0080048952.01.T01:intron 65.0%
TTGGTGGGGAAGGGAGGGGA+GGG + contig561end:26360-26379 MsG0080048952.01.T01:intron 65.0%
TTTGGTGGGGAAGGGAGGGG+AGG + contig561end:26359-26378 MsG0080048952.01.T01:intron 65.0%
!! GGCACTGGCTCTGCAACAGG+AGG - contig561end:28860-28879 None:intergenic 65.0%
CCGAGCCAGCTCGTTGGACC+AGG + contig561end:24069-24088 MsG0080048952.01.T01:intron 70.0%
GGGAAGGGAGGGGAGGGGTT+TGG + contig561end:26366-26385 MsG0080048952.01.T01:intron 70.0%
TACGCACAGTGGGGGTGGGG+GGG + contig561end:24809-24828 MsG0080048952.01.T01:intron 70.0%
TGGTGGGGAAGGGAGGGGAG+GGG + contig561end:26361-26380 MsG0080048952.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig561end gene 9286 29091 9286 ID=MsG0080048952.01;
contig561end mRNA 9286 29091 9286 ID=MsG0080048952.01.T01;Parent=MsG0080048952.01
contig561end exon 9286 9464 9286 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end exon 9966 9985 9966 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 9966 9985 9966 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end CDS 10185 10201 10185 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 10185 10201 10185 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 11846 11858 11846 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 11846 11858 11846 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 12758 12770 12758 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 12758 12770 12758 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 12856 12879 12856 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 12856 12879 12856 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 13622 13635 13622 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 13622 13635 13622 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 14325 14367 14325 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 14325 14367 14325 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 14423 14469 14423 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 14423 14469 14423 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 14839 14850 14839 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 14839 14850 14839 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 15030 15043 15030 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 15030 15043 15030 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 15706 15718 15706 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 15706 15718 15706 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 16957 16968 16957 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 16957 16968 16957 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 21383 21422 21383 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 21383 21422 21383 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 21513 21884 21513 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 21513 21884 21513 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 23632 23672 23632 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 23632 23672 23632 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 23794 23910 23794 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 23794 23910 23794 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 25541 25621 25541 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 25541 25621 25541 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 27360 27422 27360 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 27360 27422 27360 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 27495 27546 27495 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 27495 27546 27495 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 27820 27894 27820 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 27820 27894 27820 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 27998 28045 27998 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 27998 28045 27998 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 28266 28301 28266 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 28266 28301 28266 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 28394 28468 28394 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 28394 28468 28394 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
contig561end CDS 28830 28889 28830 ID=MsG0080048952.01.T01.cds;Parent=MsG0080048952.01.T01
contig561end exon 28830 29091 28830 ID=MsG0080048952.01.T01.exon;Parent=MsG0080048952.01.T01
Gene Sequence

>MsG0080048952.01.T01

ATGTATACAATTAATGGGGTTGTAAAAATCACTTTATCTTTCGCGGTTCGTTATCTTAGTAATATTCCAAAAATGCCACTAAGTGGGAGTATAAGAAGGGAAAGTGGGAAAATCGCAGAAGAGAAAAATGCTCACTGGTCAATGAAAGCTTCAATATCACCATCACTGGTCCCTGAAGAGGAGAAATTAGGAGAGAAGAAAATTAAAACAAACTTGTAGGAGAAGAGAGAGAATATTATTATAAACCATTTTTTACTTCAACAATCTAATTGGCCAGACACGCTGAAACAACAGCAGTCCACACCTGACAATATTCAATTTTCCATTATTCTTGGGAAGCTCAAAGATAAACTTCATCGCACTTTGACCACTTTGGAATCTTTCCAAATCAAAAATGCTGATCATGTATTTAACACAGTTATGACATATCTACCACAAGATTTTCGAGGAACTCTCCTCAGACAACAACGTGAACGCTCAGAGAGGAATAAGCAAGCAGAGGTGGATGCTTTGGTAAATTCTGGTGCTAGCATCCGTGATCGATATGCTCTTCTCTGGAAACAACAAATGGAAAGGAGAAGGCAATTAGCTCAGCTAGGCTCTGCAACAGGAGTCTATAAAACCCTCGTCAAGTACCTTGTTGGAGTTCCTGAGGTATTGCTTGATTTTACAAGGCAGATTAATGACGATGACGGGCCCATGGAGGAGCAGCGTCATCGCTATGGACCACCATTATACAGCCTCACCTCAATGATTCTTTCTGTCCGATTCTTCCTTTCATTATCATGGGCACGATATGAGTCTAAGAAATTAAAAGGGGAACAGTTAGCTGTCTTGGAACAAGCTGTTGATGTCTACACTATGGAGTTTGAGAGGTTCATCACATTTCTTAGTGGGGTCTTTGCAAACTCGCCTTTCTTCATTCCAGCAGATGTTGCTGGTGCAGTGGAAATAAGGAAAAATGACGATTACAAAGAGATAAGTGTTCCAGCTGGGAAAACTTTTGAGGTTATACTTTCAGTGGACTCAGTAAACTCGTATATTGCATGGGATTTTTCTTTAGTACAAGGCAAGATAAATATGGATATTGGATTTAGTTTGGAGTTTGCAAGTCCTACCGGGGAAAAGATTCTGATGTTGCCTTACCGCCGATACGAGTCTGACCAAGGGAATTTCTGCACATTAATGGCTGGAAGCTATAAACTGATATGGGACAACACACATTCAACTTTTTTTAGAAAGGTGCTACGGTATAAGGTAGATTGTATACCTCCTGTTGCAGAGCCAGTGCCATTCGACTGA

Protein sequence

>MsG0080048952.01.T01

MYTINGVVKITLSFAVRYLSNIPKMPLSGSIRRESGKIAEEKNAHWSMKASISPSLVPEEEKLGEKKIKTNL*EKRENIIINHFLLQQSNWPDTLKQQQSTPDNIQFSIILGKLKDKLHRTLTTLESFQIKNADHVFNTVMTYLPQDFRGTLLRQQRERSERNKQAEVDALVNSGASIRDRYALLWKQQMERRRQLAQLGSATGVYKTLVKYLVGVPEVLLDFTRQINDDDGPMEEQRHRYGPPLYSLTSMILSVRFFLSLSWARYESKKLKGEQLAVLEQAVDVYTMEFERFITFLSGVFANSPFFIPADVAGAVEIRKNDDYKEISVPAGKTFEVILSVDSVNSYIAWDFSLVQGKINMDIGFSLEFASPTGEKILMLPYRRYESDQGNFCTLMAGSYKLIWDNTHSTFFRKVLRYKVDCIPPVAEPVPFD*