AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042543.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042543.01.T01 MTR_8g016090 82.119 302 7 1 1 302 201 455 8.85e-169 476
MsG0880042543.01.T01 MTR_8g016090 82.119 302 7 1 1 302 251 505 5.57e-168 476
MsG0880042543.01.T01 MTR_8g016090 97.297 111 3 0 1 111 251 361 5.71e-68 216
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042543.01.T01 AT1G06470 62.706 303 63 2 1 300 157 412 5.36e-121 353
MsG0880042543.01.T01 AT1G06470 62.706 303 63 2 1 300 157 412 5.36e-121 353
MsG0880042543.01.T01 AT1G06470 62.706 303 63 2 1 300 157 412 5.36e-121 353
MsG0880042543.01.T01 AT1G06470 62.706 303 63 2 1 300 157 412 5.36e-121 353
MsG0880042543.01.T01 AT5G25400 26.384 307 150 11 5 301 102 342 8.56e-13 68.6
MsG0880042543.01.T01 AT1G53660 24.913 289 149 9 5 288 8 233 1.13e-12 67.0
MsG0880042543.01.T01 AT1G53660 24.913 289 149 9 5 288 120 345 2.07e-12 67.4
MsG0880042543.01.T01 AT1G53660 24.913 289 149 9 5 288 102 327 2.11e-12 67.0
MsG0880042543.01.T01 AT1G53660 24.913 289 149 9 5 288 68 293 2.20e-12 66.6

Find 85 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAACAGAATTTGAAATT+TGG 0.144508 8:+10323577 MsG0880042543.01.T01:CDS
ATTTGGCCTATTCACTATTA+TGG 0.187662 8:+10326270 MsG0880042543.01.T01:CDS
GATTATTCAGTTACAGATTT+TGG 0.191219 8:+10327108 MsG0880042543.01.T01:three_prime_UTR
ACTTTGGATATGAAATTATT+TGG 0.222214 8:-10326568 None:intergenic
CTCCTCAAGAATAACATATT+TGG 0.237086 8:-10326505 None:intergenic
AGAAACAGAATTTGAAATTT+GGG 0.241265 8:+10323578 MsG0880042543.01.T01:CDS
GTGGATAGTATTCATTAAAA+AGG 0.244409 8:-10321099 None:intergenic
TGCGAGGTAAATTTCATTCT+TGG 0.245888 8:+10321216 MsG0880042543.01.T01:five_prime_UTR
ATGCTTGCTGCTGTTATGTC+TGG 0.276795 8:+10323615 MsG0880042543.01.T01:CDS
ATTATTGTTGGGAGCGTATC+TGG 0.277369 8:+10323701 MsG0880042543.01.T01:CDS
AGTTTCTTGCTGATGTTCTT+TGG 0.296937 8:+10325794 MsG0880042543.01.T01:CDS
TTTACTTGGTTGAAAGGATT+TGG 0.305186 8:+10326253 MsG0880042543.01.T01:CDS
TTTCTCTTGCATTAGATCCT+TGG 0.319284 8:+10325720 MsG0880042543.01.T01:CDS
ATGAGTACTTTGATAGTTCA+TGG 0.322932 8:+10325759 MsG0880042543.01.T01:CDS
TTCTCTTGCATTAGATCCTT+GGG 0.329763 8:+10325721 MsG0880042543.01.T01:CDS
TATATGTTGTAGATCATAAT+AGG 0.345789 8:+10327152 MsG0880042543.01.T01:three_prime_UTR
GCGGTTGCCACAGCCATTAC+TGG 0.348920 8:-10325692 None:intergenic
GAGCATTGGCGTTGATGATA+TGG 0.349849 8:-10327062 None:intergenic
AAGTCTGTTGGGAGATCATA+TGG 0.350049 8:+10321061 MsG0880042543.01.T01:five_prime_UTR
TTTCTTACCAATACAGTGAT+TGG 0.360244 8:+10327265 MsG0880042543.01.T01:three_prime_UTR
TGAAATTATTTGGTCCATAT+AGG 0.374264 8:-10326558 None:intergenic
TGTCACCTGCATGAAGCTTC+TGG 0.376676 8:-10326449 None:intergenic
ACAGTTGTCCCGACTGCTCT+TGG 0.379237 8:+10321749 MsG0880042543.01.T01:five_prime_UTR
AAAGTTAATTGATACCAATA+TGG 0.397508 8:-10326058 None:intergenic
GTGGCATCTGAAAACCTATA+TGG 0.411109 8:+10326544 MsG0880042543.01.T01:exon
CACAATAGCAGGGGTTGTTA+AGG 0.412687 8:+10326026 MsG0880042543.01.T01:CDS
GCAAACAAGAGGAGAAAGAT+TGG 0.417679 8:-10322005 None:intergenic
GGCCTATTCACTATTATGGT+TGG 0.420950 8:+10326274 MsG0880042543.01.T01:CDS
TGCTTGCTGCTGTTATGTCT+GGG 0.429245 8:+10323616 MsG0880042543.01.T01:CDS
CTCTGTCACATTTGCTACAA+TGG 0.434598 8:+10321817 MsG0880042543.01.T01:CDS
TTCTTGCTGATGTTCTTTGG+TGG 0.442105 8:+10325797 MsG0880042543.01.T01:CDS
CTGTTATGTCTGGGTTTCGC+TGG 0.446264 8:+10323625 MsG0880042543.01.T01:CDS
TAAGGAGGCCGTCACCATAT+TGG 0.448702 8:+10326044 MsG0880042543.01.T01:CDS
CAGGTATAATAAAAGTCTGT+TGG 0.453501 8:+10321049 MsG0880042543.01.T01:intron
ACCAATACAGTGATTGGTAA+TGG 0.453845 8:+10327271 MsG0880042543.01.T01:three_prime_UTR
ACTTTCATGATGCGTTTACT+TGG 0.454790 8:+10326239 MsG0880042543.01.T01:CDS
GCCGTCACAGTCACAATAGC+AGG 0.457610 8:+10326015 MsG0880042543.01.T01:CDS
AGACTAATGTTGTCATGTCT+TGG 0.469305 8:+10321180 MsG0880042543.01.T01:five_prime_UTR
GATGCGTTTACTTGGTTGAA+AGG 0.473291 8:+10326247 MsG0880042543.01.T01:CDS
ATTCCTGATAGTTTAAAACT+TGG 0.475966 8:-10322664 None:intergenic
AGGTATAATAAAAGTCTGTT+GGG 0.478616 8:+10321050 MsG0880042543.01.T01:intron
CACCAACCATAATAGTGAAT+AGG 0.480731 8:-10326276 None:intergenic
AATGCATCTAAAATATTAAG+TGG 0.484373 8:-10327237 None:intergenic
ACCATTACCAATCACTGTAT+TGG 0.491682 8:-10327272 None:intergenic
CACAGGCAAAGAAAAGGATC+AGG 0.500092 8:-10325565 None:intergenic
GAAACAGAATTTGAAATTTG+GGG 0.502876 8:+10323579 MsG0880042543.01.T01:CDS
AGATCATCATACAAAAGATT+CGG 0.504216 8:+10326479 MsG0880042543.01.T01:CDS
GATAAACACAGGCAAAGAAA+AGG 0.508548 8:-10325571 None:intergenic
ATATGTTATTCTTGAGGAGA+TGG 0.508928 8:+10326509 MsG0880042543.01.T01:CDS
CTAATGTTGTCATGTCTTGG+AGG 0.515012 8:+10321183 MsG0880042543.01.T01:five_prime_UTR
ACATAGCTCATCAAGGTAAG+TGG 0.518542 8:-10325665 None:intergenic
GACTGCTCTTGGAACAGCTA+TGG 0.528783 8:+10321760 MsG0880042543.01.T01:exon
GCATATATAATACCTGCAAA+AGG 0.531461 8:-10323662 None:intergenic
AATAATATAAGAAAATGAAA+AGG 0.542918 8:-10323684 None:intergenic
ATATGGCTAAGGCAAGTCCC+TGG 0.544792 8:-10327045 None:intergenic
TCCATCGGCATATTACTGAC+AGG 0.547715 8:+10322700 MsG0880042543.01.T01:CDS
AGCCAAATATGTTATTCTTG+AGG 0.551577 8:+10326503 MsG0880042543.01.T01:CDS
GCAGTCGGGACAACTGTGAA+AGG 0.567917 8:-10321743 None:intergenic
TAATGTTGTCATGTCTTGGA+GGG 0.567982 8:+10321184 MsG0880042543.01.T01:five_prime_UTR
AAGCAATGATTTCGAAGAAG+AGG 0.568201 8:+10327006 MsG0880042543.01.T01:three_prime_UTR
AATAGCAGGGGTTGTTAAGG+AGG 0.572240 8:+10326029 MsG0880042543.01.T01:CDS
TGGCGTTGATGATATGGCTA+AGG 0.583630 8:-10327056 None:intergenic
AGATACCAGAAGCTTCATGC+AGG 0.583657 8:+10326444 MsG0880042543.01.T01:intron
GGTTTGAATTGGAAGGTTGG+AGG 0.584315 8:+10322639 MsG0880042543.01.T01:intron
TAGCTGTTCCAAGAGCAGTC+GGG 0.589209 8:-10321757 None:intergenic
ACCTGTCAGTAATATGCCGA+TGG 0.590074 8:-10322701 None:intergenic
ATAGCTGTTCCAAGAGCAGT+CGG 0.592561 8:-10321758 None:intergenic
TGGAGCTACATAGCTCATCA+AGG 0.595512 8:-10325672 None:intergenic
AGCAATGATTTCGAAGAAGA+GGG 0.603074 8:+10327007 MsG0880042543.01.T01:three_prime_UTR
TATCCACTTTGTAATGCAAG+CGG 0.604803 8:+10321115 MsG0880042543.01.T01:five_prime_UTR
CCGTCACAGTCACAATAGCA+GGG 0.608410 8:+10326016 MsG0880042543.01.T01:CDS
AGTCTGTTGGGAGATCATAT+GGG 0.608730 8:+10321062 MsG0880042543.01.T01:five_prime_UTR
GGAAAGCAAAAGCAAACAAG+AGG 0.608751 8:-10322016 None:intergenic
GAACCGCTTGCATTACAAAG+TGG 0.614590 8:-10321118 None:intergenic
AATTGATACCAATATGGTGA+CGG 0.618158 8:-10326052 None:intergenic
TGTAGCTCCAGTAATGGCTG+TGG 0.626348 8:+10325685 MsG0880042543.01.T01:CDS
GACAGAATAGAAGAGAGCAT+TGG 0.631652 8:-10327076 None:intergenic
GAGCTATGTAGCTCCAGTAA+TGG 0.650395 8:+10325679 MsG0880042543.01.T01:CDS
TACAAGTAGAAGATAAACAC+AGG 0.656230 8:-10325582 None:intergenic
CCCTGCTATTGTGACTGTGA+CGG 0.667298 8:-10326016 None:intergenic
CGTCACAGTCACAATAGCAG+GGG 0.682759 8:+10326017 MsG0880042543.01.T01:CDS
GCTTCATGCAGGTGACAATG+TGG 0.684466 8:+10326455 MsG0880042543.01.T01:CDS
GAGGAGATGGATGAACAAGA+TGG 0.689009 8:+10326522 MsG0880042543.01.T01:CDS
GAGATGGATGAACAAGATGG+TGG 0.719797 8:+10326525 MsG0880042543.01.T01:CDS
TAATGCAAGAGAAAGAAGTG+CGG 0.763184 8:-10325711 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATATATATATATA+GGG - Chr8:10324903-10324922 None:intergenic 0.0%
!! AATAATATAAGAAAATGAAA+AGG - Chr8:10323687-10323706 None:intergenic 10.0%
!!! AAATATTTTAATACAATACT+AGG - Chr8:10327211-10327230 None:intergenic 10.0%
!!! ATATTTTATATATTCATTTG+TGG + Chr8:10326635-10326654 MsG0880042543.01.T01:intron 10.0%
!!! ATTAAACATTCTAAAATTTA+AGG + Chr8:10322101-10322120 MsG0880042543.01.T01:intron 10.0%
!! AGTACTATATATCTATATTT+AGG - Chr8:10324020-10324039 None:intergenic 15.0%
!! AGTTTATTTATTGAAAACAT+TGG + Chr8:10324701-10324720 MsG0880042543.01.T01:intron 15.0%
!! ATATATCTATATTTAGGAAT+TGG - Chr8:10324014-10324033 None:intergenic 15.0%
!! CAACTGTTTATTATATTTAA+TGG + Chr8:10324416-10324435 MsG0880042543.01.T01:intron 15.0%
!! CTTTAATATGATAATTAAGT+AGG + Chr8:10321263-10321282 MsG0880042543.01.T01:intron 15.0%
!! TAAAATCATATTAATGATGA+AGG + Chr8:10326681-10326700 MsG0880042543.01.T01:intron 15.0%
!! TAAATATAGATATATAGTAC+TGG + Chr8:10324019-10324038 MsG0880042543.01.T01:intron 15.0%
!! TATAACAAAATTCAGATTAA+AGG + Chr8:10323758-10323777 MsG0880042543.01.T01:intron 15.0%
!! TATAATTAATGTTCGATTTA+AGG - Chr8:10325004-10325023 None:intergenic 15.0%
!! TGAAATGATAAATAATACTA+TGG - Chr8:10322748-10322767 None:intergenic 15.0%
!! TTAAAATATCAACTTTACAT+CGG + Chr8:10323005-10323024 MsG0880042543.01.T01:intron 15.0%
!! TTTATACTAACAAATTAGTA+TGG + Chr8:10323272-10323291 MsG0880042543.01.T01:intron 15.0%
!!! ATATGAAATGTTTTAACAAT+AGG + Chr8:10321561-10321580 MsG0880042543.01.T01:intron 15.0%
!!! CATTTTCTTATATTATTGTT+GGG + Chr8:10323690-10323709 MsG0880042543.01.T01:CDS 15.0%
!!! TATTTTTCTTTCCTAAATTA+AGG + Chr8:10322900-10322919 MsG0880042543.01.T01:intron 15.0%
!!! TCATTTTCTTATATTATTGT+TGG + Chr8:10323689-10323708 MsG0880042543.01.T01:CDS 15.0%
!!! TCTACATTTTTTTATATGAT+TGG + Chr8:10326088-10326107 MsG0880042543.01.T01:intron 15.0%
!!! TGTCATTTAATTATAAATGT+TGG + Chr8:10322618-10322637 MsG0880042543.01.T01:intron 15.0%
!! AAAATTACACTGTAAATGTA+AGG - Chr8:10324230-10324249 None:intergenic 20.0%
!! AAAGTTAATTGATACCAATA+TGG - Chr8:10326061-10326080 None:intergenic 20.0%
!! AAATTTATGAGACCAAAAAT+AGG - Chr8:10321159-10321178 None:intergenic 20.0%
!! AAGTCAAATATATATATCAG+AGG - Chr8:10325858-10325877 None:intergenic 20.0%
!! ACAGAATTACAAATTATATG+CGG - Chr8:10321377-10321396 None:intergenic 20.0%
!! ACTTTGGATATGAAATTATT+TGG - Chr8:10326571-10326590 None:intergenic 20.0%
!! AGTCAAATATATATATCAGA+GGG - Chr8:10325857-10325876 None:intergenic 20.0%
!! ATTTAACTGTATCAAAGAAA+AGG - Chr8:10326597-10326616 None:intergenic 20.0%
!! GATTACAAAAACAAAATGAA+AGG - Chr8:10322051-10322070 None:intergenic 20.0%
!! TATAAGTTCAATCATTATGA+AGG + Chr8:10325383-10325402 MsG0880042543.01.T01:intron 20.0%
!! TATATGTTGTAGATCATAAT+AGG + Chr8:10327152-10327171 MsG0880042543.01.T01:three_prime_UTR 20.0%
!! TATTCGTCTATCAATTATAA+TGG + Chr8:10323360-10323379 MsG0880042543.01.T01:intron 20.0%
!! TGGATAGTATTCATTAAAAA+GGG - Chr8:10321101-10321120 None:intergenic 20.0%
!! TTCTTGAATAATCATATGTT+TGG + Chr8:10322544-10322563 MsG0880042543.01.T01:intron 20.0%
!!! AAGAAACAGAATTTGAAATT+TGG + Chr8:10323577-10323596 MsG0880042543.01.T01:CDS 20.0%
!!! AATGCATCTAAAATATTAAG+TGG - Chr8:10327240-10327259 None:intergenic 20.0%
!!! AATTTCTGATATAGTCTTTT+AGG - Chr8:10322339-10322358 None:intergenic 20.0%
!!! AGAAACAGAATTTGAAATTT+GGG + Chr8:10323578-10323597 MsG0880042543.01.T01:CDS 20.0%
!!! ATTATTTGAGACATGAATAT+TGG + Chr8:10326849-10326868 MsG0880042543.01.T01:intron 20.0%
!!! ATTGAACTTATAATTTTCCT+TGG - Chr8:10325375-10325394 None:intergenic 20.0%
!!! TAATGTCTTCAAGTTTATTT+TGG + Chr8:10323538-10323557 MsG0880042543.01.T01:intron 20.0%
!!! TATTGACAATGATTTCTTTT+CGG - Chr8:10325120-10325139 None:intergenic 20.0%
!!! TATTTAATTTTTACCAGTCA+TGG + Chr8:10325030-10325049 MsG0880042543.01.T01:intron 20.0%
!!! TCTACAATATTTTTCACATT+AGG - Chr8:10325243-10325262 None:intergenic 20.0%
!!! TGTAACTTCATAATACATTT+TGG + Chr8:10321295-10321314 MsG0880042543.01.T01:intron 20.0%
!!! TTACTCAACAACTATATTTT+TGG + Chr8:10327294-10327313 MsG0880042543.01.T01:three_prime_UTR 20.0%
!!! TTAGTTTTGAATTATTGTTG+AGG - Chr8:10323521-10323540 None:intergenic 20.0%
!!! TTATAAATGTTGGTTTGAAT+TGG + Chr8:10322628-10322647 MsG0880042543.01.T01:intron 20.0%
!!! TTGGTTTTTCTATAAATGAT+TGG + Chr8:10323383-10323402 MsG0880042543.01.T01:intron 20.0%
!!! TTTTCTTTGATACAGTTAAA+TGG + Chr8:10326596-10326615 MsG0880042543.01.T01:intron 20.0%
!!! TTTTGTAGTTTCCTTAATTT+AGG - Chr8:10322914-10322933 None:intergenic 20.0%
! AAAAGGAAAGGTAAATAAAG+AGG - Chr8:10321961-10321980 None:intergenic 25.0%
! AAAGGAAAGGTAAATAAAGA+GGG - Chr8:10321960-10321979 None:intergenic 25.0%
! AATAAACTATTACATGTGCA+AGG - Chr8:10324689-10324708 None:intergenic 25.0%
! AATAATGAACTGATGTTACA+TGG - Chr8:10326779-10326798 None:intergenic 25.0%
! AATACTCAATATCTGTTAAG+AGG + Chr8:10325339-10325358 MsG0880042543.01.T01:intron 25.0%
! AATCATATTAATGATGAAGG+CGG + Chr8:10326684-10326703 MsG0880042543.01.T01:intron 25.0%
! AGATCATCATACAAAAGATT+CGG + Chr8:10326479-10326498 MsG0880042543.01.T01:CDS 25.0%
! AGCAAGTTATAACTAAAAAG+TGG + Chr8:10324815-10324834 MsG0880042543.01.T01:intron 25.0%
! AGGTATAATAAAAGTCTGTT+GGG + Chr8:10321050-10321069 MsG0880042543.01.T01:intron 25.0%
! ATAAACTCCTACCATAAAAA+AGG - Chr8:10325831-10325850 None:intergenic 25.0%
! ATAACTTTCTTACTACTGTA+AGG - Chr8:10323088-10323107 None:intergenic 25.0%
! ATCACAAACAACACTAAAAA+GGG - Chr8:10320984-10321003 None:intergenic 25.0%
! ATTAAGATTCTAATGTTACG+TGG + Chr8:10321449-10321468 MsG0880042543.01.T01:intron 25.0%
! ATTGAAAAGAAAGAATCCTA+TGG + Chr8:10324657-10324676 MsG0880042543.01.T01:intron 25.0%
! GATTTACACTGCAAAATAAA+AGG - Chr8:10321978-10321997 None:intergenic 25.0%
! GGTATTGTTAGATTTAGATT+AGG + Chr8:10324722-10324741 MsG0880042543.01.T01:intron 25.0%
! GTGGATAGTATTCATTAAAA+AGG - Chr8:10321102-10321121 None:intergenic 25.0%
! TAACTTTCTTACTACTGTAA+GGG - Chr8:10323087-10323106 None:intergenic 25.0%
! TATATTTAGGAATTGGAACT+AGG - Chr8:10324007-10324026 None:intergenic 25.0%
! TCAATCATTATGAAGGATTT+AGG + Chr8:10325390-10325409 MsG0880042543.01.T01:intron 25.0%
! TGAAATTATTTGGTCCATAT+AGG - Chr8:10326561-10326580 None:intergenic 25.0%
! TGAATTGATGTTACATTACA+TGG - Chr8:10326830-10326849 None:intergenic 25.0%
! TTATATCTTTATCTTCTTGC+AGG + Chr8:10325957-10325976 MsG0880042543.01.T01:intron 25.0%
! TTCTATAAATGATTGGAACA+GGG + Chr8:10323390-10323409 MsG0880042543.01.T01:intron 25.0%
! TTTCTATAAATGATTGGAAC+AGG + Chr8:10323389-10323408 MsG0880042543.01.T01:intron 25.0%
!! AGGATTCTTTCTTTTCAATT+TGG - Chr8:10324656-10324675 None:intergenic 25.0%
!! AGTTTATTGACTGAGAATTA+TGG - Chr8:10326930-10326949 None:intergenic 25.0%
!! ATTCCTGATAGTTTAAAACT+TGG - Chr8:10322667-10322686 None:intergenic 25.0%
!! CGAAATTTATCACCTATTTT+TGG + Chr8:10321144-10321163 MsG0880042543.01.T01:five_prime_UTR 25.0%
!! GAAACAGAATTTGAAATTTG+GGG + Chr8:10323579-10323598 MsG0880042543.01.T01:CDS 25.0%
!! GATTATTCAGTTACAGATTT+TGG + Chr8:10327108-10327127 MsG0880042543.01.T01:three_prime_UTR 25.0%
!! GCATATAATTTGTAATTCTG+TGG + Chr8:10321376-10321395 MsG0880042543.01.T01:intron 25.0%
!! GTTAGTTGTTTCCTTAAAAA+TGG - Chr8:10321929-10321948 None:intergenic 25.0%
!!! ACAATTTGCATTTTTCAGAA+GGG - Chr8:10323892-10323911 None:intergenic 25.0%
!!! ACCTTATTTTGTTGTGTTTA+CGG + Chr8:10325896-10325915 MsG0880042543.01.T01:intron 25.0%
!!! ACCTTTTTTACAATTAGCAA+GGG + Chr8:10326735-10326754 MsG0880042543.01.T01:intron 25.0%
!!! ATCGTTATATGTTTTGAAAC+AGG + Chr8:10321030-10321049 MsG0880042543.01.T01:intron 25.0%
!!! ATTCAGATTAAAGGTTTTGT+TGG + Chr8:10323767-10323786 MsG0880042543.01.T01:intron 25.0%
!!! GTTTTGGGATTTTAATTTGT+TGG - Chr8:10324152-10324171 None:intergenic 25.0%
!!! TACCTTTTTTACAATTAGCA+AGG + Chr8:10326734-10326753 MsG0880042543.01.T01:intron 25.0%
!!! TATCAAAGTACTCATTTTCT+CGG - Chr8:10325754-10325773 None:intergenic 25.0%
!!! TGGTATTCTATGTTTTAACT+TGG + Chr8:10321236-10321255 MsG0880042543.01.T01:intron 25.0%
!!! TGTTTTAACAATAGGTTGAT+TGG + Chr8:10321569-10321588 MsG0880042543.01.T01:intron 25.0%
AAAGATAGTGCTATCTACAA+AGG - Chr8:10325545-10325564 None:intergenic 30.0%
AAATTGAAAGAACAGCATGA+TGG - Chr8:10322983-10323002 None:intergenic 30.0%
AACCAAACATTTAAGTGAAC+AGG - Chr8:10326419-10326438 None:intergenic 30.0%
AACCTGTTCACTTAAATGTT+TGG + Chr8:10326414-10326433 MsG0880042543.01.T01:intron 30.0%
AAGGAAAGGTAAATAAAGAG+GGG - Chr8:10321959-10321978 None:intergenic 30.0%
AATAATCTAGATTCATGCTC+AGG + Chr8:10326151-10326170 MsG0880042543.01.T01:intron 30.0%
AATTGATACCAATATGGTGA+CGG - Chr8:10326055-10326074 None:intergenic 30.0%
ACAAACTAATATTCATCGAG+AGG - Chr8:10322578-10322597 None:intergenic 30.0%
ACACCTTCACAAAAATTAGT+TGG - Chr8:10324790-10324809 None:intergenic 30.0%
ACACTGCAAAATAAAAGGAA+AGG - Chr8:10321973-10321992 None:intergenic 30.0%
ACCGTAAACACAACAAAATA+AGG - Chr8:10325900-10325919 None:intergenic 30.0%
ACTCTTATGATTATGTGGTT+CGG + Chr8:10321510-10321529 MsG0880042543.01.T01:intron 30.0%
AGCCAAATATGTTATTCTTG+AGG + Chr8:10326503-10326522 MsG0880042543.01.T01:CDS 30.0%
ATAGAGGATCTTAAAAAGGA+GGG - Chr8:10323055-10323074 None:intergenic 30.0%
ATATGTTATTCTTGAGGAGA+TGG + Chr8:10326509-10326528 MsG0880042543.01.T01:CDS 30.0%
ATCAAAGAAAAGGCTTACTT+TGG - Chr8:10326587-10326606 None:intergenic 30.0%
ATCAGTTCATTATTTGAGCA+AGG + Chr8:10326785-10326804 MsG0880042543.01.T01:intron 30.0%
ATCATATTAATGATGAAGGC+GGG + Chr8:10326685-10326704 MsG0880042543.01.T01:intron 30.0%
ATTTGGCCTATTCACTATTA+TGG + Chr8:10326270-10326289 MsG0880042543.01.T01:CDS 30.0%
CAATAAATAAGAGTTCTCAC+CGG + Chr8:10324465-10324484 MsG0880042543.01.T01:intron 30.0%
CAATCATGTTTCTCATTTGT+CGG - Chr8:10324123-10324142 None:intergenic 30.0%
CAGGTATAATAAAAGTCTGT+TGG + Chr8:10321049-10321068 MsG0880042543.01.T01:intron 30.0%
CATCACAAACAACACTAAAA+AGG - Chr8:10320985-10321004 None:intergenic 30.0%
CATCATAGATGAGAATTGTT+GGG - Chr8:10322316-10322335 None:intergenic 30.0%
CCAGAACATTAAGTTCAATA+TGG - Chr8:10326185-10326204 None:intergenic 30.0%
CCATATTGAACTTAATGTTC+TGG + Chr8:10326182-10326201 MsG0880042543.01.T01:intron 30.0%
CGTCTATCAATTATAATGGT+TGG + Chr8:10323364-10323383 MsG0880042543.01.T01:intron 30.0%
CTCCTCAAGAATAACATATT+TGG - Chr8:10326508-10326527 None:intergenic 30.0%
CTTTACAATGCAAGAAATTG+TGG + Chr8:10322364-10322383 MsG0880042543.01.T01:intron 30.0%
GAATCATGTTTGATATCCAA+AGG + Chr8:10323197-10323216 MsG0880042543.01.T01:intron 30.0%
GAGATAAAAACCACAGAAAA+CGG - Chr8:10321600-10321619 None:intergenic 30.0%
GCATATATAATACCTGCAAA+AGG - Chr8:10323665-10323684 None:intergenic 30.0%
GCATTGCTAGGATAATTTAT+GGG + Chr8:10322128-10322147 MsG0880042543.01.T01:intron 30.0%
GTGGATACTAAAGACAAAAT+AGG + Chr8:10325170-10325189 MsG0880042543.01.T01:intron 30.0%
GTTCTATGGAACTAAATGTT+GGG + Chr8:10325084-10325103 MsG0880042543.01.T01:intron 30.0%
TAAGCTCTTCATATTCTTGT+TGG + Chr8:10323337-10323356 MsG0880042543.01.T01:intron 30.0%
TACAAGTAGAAGATAAACAC+AGG - Chr8:10325585-10325604 None:intergenic 30.0%
TATCAAACATGATTCCTGAT+AGG - Chr8:10323192-10323211 None:intergenic 30.0%
TATTCATTAAAAAGGGAGCT+GGG - Chr8:10321094-10321113 None:intergenic 30.0%
TCAGTTCATTATTTGAGCAA+GGG + Chr8:10326786-10326805 MsG0880042543.01.T01:intron 30.0%
TCCCTTGCTAATTGTAAAAA+AGG - Chr8:10326739-10326758 None:intergenic 30.0%
TGAATGTGAAAAGGTAAAAG+TGG + Chr8:10324339-10324358 MsG0880042543.01.T01:intron 30.0%
TGATTCCTGATAGGATATAA+TGG - Chr8:10323183-10323202 None:intergenic 30.0%
TGCATTGCTAGGATAATTTA+TGG + Chr8:10322127-10322146 MsG0880042543.01.T01:intron 30.0%
TGTTAAACATGATTTACGAC+AGG + Chr8:10325427-10325446 MsG0880042543.01.T01:intron 30.0%
TGTTCTATGGAACTAAATGT+TGG + Chr8:10325083-10325102 MsG0880042543.01.T01:intron 30.0%
TGTTGATCCATAAGAAACAA+GGG + Chr8:10324195-10324214 MsG0880042543.01.T01:intron 30.0%
TTGGATAGAGGATCTTAAAA+AGG - Chr8:10323059-10323078 None:intergenic 30.0%
TTGTTGATCCATAAGAAACA+AGG + Chr8:10324194-10324213 MsG0880042543.01.T01:intron 30.0%
TTTAAGGATTGATTGACCAA+AGG - Chr8:10324988-10325007 None:intergenic 30.0%
TTTACTTGGTTGAAAGGATT+TGG + Chr8:10326253-10326272 MsG0880042543.01.T01:CDS 30.0%
TTTCTTACCAATACAGTGAT+TGG + Chr8:10327265-10327284 MsG0880042543.01.T01:three_prime_UTR 30.0%
! AAGACAATAGGTGTTCTTTT+TGG + Chr8:10322208-10322227 MsG0880042543.01.T01:intron 30.0%
! ACACCAACTAATTTTTGTGA+AGG + Chr8:10324784-10324803 MsG0880042543.01.T01:intron 30.0%
! ACATTCTTGCTTCATTTTCT+TGG + Chr8:10324588-10324607 MsG0880042543.01.T01:intron 30.0%
! AGTTGTTTCCTTAAAAATGG+AGG - Chr8:10321926-10321945 None:intergenic 30.0%
! ATCTTAAAAAGGAGGGTTTT+TGG - Chr8:10323048-10323067 None:intergenic 30.0%
! ATGAGTACTTTGATAGTTCA+TGG + Chr8:10325759-10325778 MsG0880042543.01.T01:CDS 30.0%
! CATTCTTGCTTCATTTTCTT+GGG + Chr8:10324589-10324608 MsG0880042543.01.T01:intron 30.0%
! GGATTTAGGTTTAAAATGTC+TGG + Chr8:10325404-10325423 MsG0880042543.01.T01:intron 30.0%
! GTTTTCGTTGCTATGTTTAA+CGG + Chr8:10324279-10324298 MsG0880042543.01.T01:intron 30.0%
! TAAAGCACTATACGAGTAAT+AGG - Chr8:10326126-10326145 None:intergenic 30.0%
! TTAATATTCTAGAGAGCCAT+GGG - Chr8:10323467-10323486 None:intergenic 30.0%
! TTGTTACTTGTTGAGTGTTA+TGG + Chr8:10321339-10321358 MsG0880042543.01.T01:intron 30.0%
! TTTAATATTCTAGAGAGCCA+TGG - Chr8:10323468-10323487 None:intergenic 30.0%
!! AAATGTTGGTTTGAATTGGA+AGG + Chr8:10322632-10322651 MsG0880042543.01.T01:intron 30.0%
!! ATCATTTTAGTCATCTCCAT+CGG + Chr8:10322685-10322704 MsG0880042543.01.T01:CDS 30.0%
!! CAATTTGCATTTTTCAGAAG+GGG - Chr8:10323891-10323910 None:intergenic 30.0%
!! CACAATTTGCATTTTTCAGA+AGG - Chr8:10323893-10323912 None:intergenic 30.0%
!! CGCTAAATTTTGAGTGAAAA+TGG - Chr8:10321541-10321560 None:intergenic 30.0%
!! CTACATTTCCTCCATTTTTA+AGG + Chr8:10321915-10321934 MsG0880042543.01.T01:intron 30.0%
!! TTTTTATATGATTGGTCCAG+TGG + Chr8:10326096-10326115 MsG0880042543.01.T01:intron 30.0%
!!! ATACTTTTTCCAATGACTTC+AGG + Chr8:10325632-10325651 MsG0880042543.01.T01:CDS 30.0%
!!! GTACCAAGTTTTAAACTATC+AGG + Chr8:10322661-10322680 MsG0880042543.01.T01:CDS 30.0%
!!! TATATTTTTTCTGCTGCCTT+TGG + Chr8:10324969-10324988 MsG0880042543.01.T01:intron 30.0%
AAAAGTGGAGAACAATTTGG+TGG + Chr8:10324354-10324373 MsG0880042543.01.T01:intron 35.0%
AAAGGTAAATAAAGAGGGGA+AGG - Chr8:10321955-10321974 None:intergenic 35.0%
AAGCAATGATTTCGAAGAAG+AGG + Chr8:10327006-10327025 MsG0880042543.01.T01:three_prime_UTR 35.0%
AAGTGCATTGTTCAAGCTTT+AGG + Chr8:10323487-10323506 MsG0880042543.01.T01:intron 35.0%
AATAATGCAGATCTTACACG+AGG - Chr8:10323960-10323979 None:intergenic 35.0%
ACAATAATAGGGATCGTATC+CGG - Chr8:10324487-10324506 None:intergenic 35.0%
ACCAATACAGTGATTGGTAA+TGG + Chr8:10327271-10327290 MsG0880042543.01.T01:three_prime_UTR 35.0%
ACCATTACCAATCACTGTAT+TGG - Chr8:10327275-10327294 None:intergenic 35.0%
ACTTTCATGATGCGTTTACT+TGG + Chr8:10326239-10326258 MsG0880042543.01.T01:CDS 35.0%
AGACTAATGTTGTCATGTCT+TGG + Chr8:10321180-10321199 MsG0880042543.01.T01:five_prime_UTR 35.0%
AGCAATGATTTCGAAGAAGA+GGG + Chr8:10327007-10327026 MsG0880042543.01.T01:three_prime_UTR 35.0%
AGTTTCTTGCTGATGTTCTT+TGG + Chr8:10325794-10325813 MsG0880042543.01.T01:CDS 35.0%
ATAAGACTGGCAATGTTCTA+TGG + Chr8:10325070-10325089 MsG0880042543.01.T01:intron 35.0%
ATAATGCAGATCTTACACGA+GGG - Chr8:10323959-10323978 None:intergenic 35.0%
ATATCAACTAATGCCACAGA+TGG + Chr8:10321714-10321733 MsG0880042543.01.T01:intron 35.0%
ATGTAGGAAGGAGGTAAAAA+GGG - Chr8:10323834-10323853 None:intergenic 35.0%
CAAAATGAAAGGAAACTCAC+CGG - Chr8:10322040-10322059 None:intergenic 35.0%
CAAATGGCAATAGGATAACT+TGG - Chr8:10324757-10324776 None:intergenic 35.0%
CAACTCCATTATATCCTATC+AGG + Chr8:10323175-10323194 MsG0880042543.01.T01:intron 35.0%
CACCAACCATAATAGTGAAT+AGG - Chr8:10326279-10326298 None:intergenic 35.0%
CTCTCACTCTTATGATTATG+TGG + Chr8:10321505-10321524 MsG0880042543.01.T01:intron 35.0%
CTGAATCACGTGAATATTGA+AGG + Chr8:10326980-10326999 MsG0880042543.01.T01:intron 35.0%
CTTCAATATTCACGTGATTC+AGG - Chr8:10326982-10327001 None:intergenic 35.0%
GAAAATGAGGCAAATAGACT+AGG + Chr8:10321482-10321501 MsG0880042543.01.T01:intron 35.0%
GAACAAAGCGATTAAACTGT+AGG - Chr8:10324065-10324084 None:intergenic 35.0%
GATAAACACAGGCAAAGAAA+AGG - Chr8:10325574-10325593 None:intergenic 35.0%
GATAAGAGACGAAGCATAAA+AGG - Chr8:10321013-10321032 None:intergenic 35.0%
GATAGAGGATCTTAAAAAGG+AGG - Chr8:10323056-10323075 None:intergenic 35.0%
GCAAGTGACTAAATCATCTA+AGG - Chr8:10325272-10325291 None:intergenic 35.0%
GCATAGAAGTGAATGTGAAA+AGG + Chr8:10324330-10324349 MsG0880042543.01.T01:intron 35.0%
GCATCATAGATGAGAATTGT+TGG - Chr8:10322317-10322336 None:intergenic 35.0%
GGACACAAAAATATCTTCCA+GGG + Chr8:10327028-10327047 MsG0880042543.01.T01:three_prime_UTR 35.0%
GGTAAAAGTGGAGAACAATT+TGG + Chr8:10324351-10324370 MsG0880042543.01.T01:intron 35.0%
GTATTCATTAAAAAGGGAGC+TGG - Chr8:10321095-10321114 None:intergenic 35.0%
GTTGATCCATAAGAAACAAG+GGG + Chr8:10324196-10324215 MsG0880042543.01.T01:intron 35.0%
TAATGCAAGAGAAAGAAGTG+CGG - Chr8:10325714-10325733 None:intergenic 35.0%
TAATGTTGTCATGTCTTGGA+GGG + Chr8:10321184-10321203 MsG0880042543.01.T01:five_prime_UTR 35.0%
TATCCACTTTGTAATGCAAG+CGG + Chr8:10321115-10321134 MsG0880042543.01.T01:five_prime_UTR 35.0%
TCACATTCACTTCTATGCTT+CGG - Chr8:10324328-10324347 None:intergenic 35.0%
TCGTGTAAGATCTGCATTAT+TGG + Chr8:10323959-10323978 MsG0880042543.01.T01:intron 35.0%
TGCATATCTCAGAAGACAAT+AGG + Chr8:10322196-10322215 MsG0880042543.01.T01:intron 35.0%
TGCGAGGTAAATTTCATTCT+TGG + Chr8:10321216-10321235 MsG0880042543.01.T01:five_prime_UTR 35.0%
TTATTGCCTGTTCGAAATTC+TGG - Chr8:10323320-10323339 None:intergenic 35.0%
TTCTCTTGCATTAGATCCTT+GGG + Chr8:10325721-10325740 MsG0880042543.01.T01:CDS 35.0%
TTGATCCATAAGAAACAAGG+GGG + Chr8:10324197-10324216 MsG0880042543.01.T01:intron 35.0%
TTTCTCTTGCATTAGATCCT+TGG + Chr8:10325720-10325739 MsG0880042543.01.T01:CDS 35.0%
TTTGTGTGTGTATGTGTAGA+TGG - Chr8:10324528-10324547 None:intergenic 35.0%
! AATTTCCCCCTTGTTTCTTA+TGG - Chr8:10324205-10324224 None:intergenic 35.0%
! ACATTTGCTACAATGGTTTG+TGG + Chr8:10321824-10321843 MsG0880042543.01.T01:intron 35.0%
! CGTTAGTTATTCTTTTCCCA+TGG + Chr8:10323448-10323467 MsG0880042543.01.T01:intron 35.0%
! GTCTTTTAGCAAATGGCAAT+AGG - Chr8:10324766-10324785 None:intergenic 35.0%
! TAAGAGGTATAGAAAGACCA+AGG + Chr8:10325355-10325374 MsG0880042543.01.T01:intron 35.0%
! TACTTCTGTAGGGTATCTTT+GGG + Chr8:10322848-10322867 MsG0880042543.01.T01:intron 35.0%
! TGGTAATGTTACATCAGAAC+CGG + Chr8:10321889-10321908 MsG0880042543.01.T01:intron 35.0%
! TTGCATAAAAGTGTGCTTCA+GGG - Chr8:10321655-10321674 None:intergenic 35.0%
! TTTGCATAAAAGTGTGCTTC+AGG - Chr8:10321656-10321675 None:intergenic 35.0%
! TTTGCCTCATTTTCCATGTT+TGG - Chr8:10321476-10321495 None:intergenic 35.0%
!! ACCTAAAAGTGCTGTTAGAA+TGG + Chr8:10322424-10322443 MsG0880042543.01.T01:intron 35.0%
!! AGTTGGTGTCTTTTAGCAAA+TGG - Chr8:10324773-10324792 None:intergenic 35.0%
!! ATGTACATTGATTCGCACTT+AGG + Chr8:10322768-10322787 MsG0880042543.01.T01:intron 35.0%
!! TAAAAAGGAGGGTTTTTGGA+GGG - Chr8:10323044-10323063 None:intergenic 35.0%
!! TCTTGTTTGCTTTTGCTTTC+CGG + Chr8:10322018-10322037 MsG0880042543.01.T01:CDS 35.0%
!! TGACAACTTTGAAGGGTTTT+GGG - Chr8:10324167-10324186 None:intergenic 35.0%
!! TTAAAAAGGAGGGTTTTTGG+AGG - Chr8:10323045-10323064 None:intergenic 35.0%
!! TTGACAACTTTGAAGGGTTT+TGG - Chr8:10324168-10324187 None:intergenic 35.0%
!! TTTTTCAGACCTGAAGTCAT+TGG - Chr8:10325644-10325663 None:intergenic 35.0%
!!! ACACTTGCCTTTTTTATGGT+AGG + Chr8:10325821-10325840 MsG0880042543.01.T01:intron 35.0%
!!! CTGTCTGTATGCTACTTTTT+TGG - Chr8:10323236-10323255 None:intergenic 35.0%
!!! TGGAACACTTGCCTTTTTTA+TGG + Chr8:10325817-10325836 MsG0880042543.01.T01:CDS 35.0%
!!! TTCATGCTGCTTTGTGATTT+TGG + Chr8:10322521-10322540 MsG0880042543.01.T01:intron 35.0%
AAGGAGGTAAAAAGGGTAAG+AGG - Chr8:10323827-10323846 None:intergenic 40.0%
AAGTCTGTTGGGAGATCATA+TGG + Chr8:10321061-10321080 MsG0880042543.01.T01:five_prime_UTR 40.0%
AAGTGGATAATCACACCTTG+AGG + Chr8:10324832-10324851 MsG0880042543.01.T01:intron 40.0%
AATGGAGGAAATGTAGAGTC+CGG - Chr8:10321911-10321930 None:intergenic 40.0%
AATGTTACGTGGTCCAAACA+TGG + Chr8:10321460-10321479 MsG0880042543.01.T01:intron 40.0%
AATGTTCAGTTAGCGATAGC+AGG - Chr8:10324573-10324592 None:intergenic 40.0%
ACATAGCTCATCAAGGTAAG+TGG - Chr8:10325668-10325687 None:intergenic 40.0%
ACCGTGTTTGACAACTTTGA+AGG - Chr8:10324175-10324194 None:intergenic 40.0%
AGGTACATCTGTACTTCTGT+AGG + Chr8:10322837-10322856 MsG0880042543.01.T01:intron 40.0%
AGTCAAGAGATGATGTAGGA+AGG - Chr8:10323846-10323865 None:intergenic 40.0%
AGTCTGTTGGGAGATCATAT+GGG + Chr8:10321062-10321081 MsG0880042543.01.T01:five_prime_UTR 40.0%
ATGTGCAAGGAACTTACCAT+AGG - Chr8:10324676-10324695 None:intergenic 40.0%
ATTTAAGGAGCTGCATTGCT+AGG + Chr8:10322116-10322135 MsG0880042543.01.T01:intron 40.0%
CAGTTACCAGAATTTCGAAC+AGG + Chr8:10323311-10323330 MsG0880042543.01.T01:intron 40.0%
CCCTTCAAAGTTGTCAAACA+CGG + Chr8:10324171-10324190 MsG0880042543.01.T01:intron 40.0%
CCGTGTTTGACAACTTTGAA+GGG - Chr8:10324174-10324193 None:intergenic 40.0%
CTAATGTTGTCATGTCTTGG+AGG + Chr8:10321183-10321202 MsG0880042543.01.T01:five_prime_UTR 40.0%
GATAGAAAGTTGAGAGTGAG+AGG + Chr8:10325212-10325231 MsG0880042543.01.T01:intron 40.0%
GATGAGTCAAGAGATGATGT+AGG - Chr8:10323850-10323869 None:intergenic 40.0%
GATGCGTTTACTTGGTTGAA+AGG + Chr8:10326247-10326266 MsG0880042543.01.T01:CDS 40.0%
GATGTAGGAAGGAGGTAAAA+AGG - Chr8:10323835-10323854 None:intergenic 40.0%
GCAAACAAGAGGAGAAAGAT+TGG - Chr8:10322008-10322027 None:intergenic 40.0%
GGAAAGCAAAAGCAAACAAG+AGG - Chr8:10322019-10322038 None:intergenic 40.0%
GGCCTATTCACTATTATGGT+TGG + Chr8:10326274-10326293 MsG0880042543.01.T01:CDS 40.0%
GGGACACAAAAATATCTTCC+AGG + Chr8:10327027-10327046 MsG0880042543.01.T01:three_prime_UTR 40.0%
GGTACATCTGTACTTCTGTA+GGG + Chr8:10322838-10322857 MsG0880042543.01.T01:intron 40.0%
GTAGCATACAGACAGAAGTT+CGG + Chr8:10323241-10323260 MsG0880042543.01.T01:intron 40.0%
GTGGCATCTGAAAACCTATA+TGG + Chr8:10326544-10326563 MsG0880042543.01.T01:exon 40.0%
TGCTAAAAGACACCTCCAAA+GGG + Chr8:10324862-10324881 MsG0880042543.01.T01:intron 40.0%
TGGATGTCAACAACAACCTT+TGG - Chr8:10323216-10323235 None:intergenic 40.0%
TGGGAGCGATTAATGCATAA+AGG + Chr8:10322147-10322166 MsG0880042543.01.T01:intron 40.0%
TGGTCCAAACATGGAAAATG+AGG + Chr8:10321469-10321488 MsG0880042543.01.T01:intron 40.0%
TTCAAAAGATCAAGCCAGCA+TGG + Chr8:10322793-10322812 MsG0880042543.01.T01:intron 40.0%
TTCTTGCTGATGTTCTTTGG+TGG + Chr8:10325797-10325816 MsG0880042543.01.T01:CDS 40.0%
TTGCAAAGAAGACCAGAAGA+AGG + Chr8:10325288-10325307 MsG0880042543.01.T01:intron 40.0%
TTGCTAAAAGACACCTCCAA+AGG + Chr8:10324861-10324880 MsG0880042543.01.T01:intron 40.0%
! ATTATTGTTGGGAGCGTATC+TGG + Chr8:10323701-10323720 MsG0880042543.01.T01:CDS 40.0%
! CTCTGTCACATTTGCTACAA+TGG + Chr8:10321817-10321836 MsG0880042543.01.T01:CDS 40.0%
! CTTGCTTCATTTTCTTGGGT+TGG + Chr8:10324593-10324612 MsG0880042543.01.T01:intron 40.0%
! GACAGAATAGAAGAGAGCAT+TGG - Chr8:10327079-10327098 None:intergenic 40.0%
! GCCATTCTAACAGCACTTTT+AGG - Chr8:10322428-10322447 None:intergenic 40.0%
! GTACTTCTGTAGGGTATCTT+TGG + Chr8:10322847-10322866 MsG0880042543.01.T01:intron 40.0%
! GTTTCATGCTGTTTGTGTGT+AGG + Chr8:10326204-10326223 MsG0880042543.01.T01:intron 40.0%
! TATATGATTGGTCCAGTGGA+TGG + Chr8:10326100-10326119 MsG0880042543.01.T01:intron 40.0%
! TATCTTTGGGTGGAGGATTT+TGG + Chr8:10322861-10322880 MsG0880042543.01.T01:intron 40.0%
! TATGACTCAGATCCTTTTGC+AGG + Chr8:10323650-10323669 MsG0880042543.01.T01:CDS 40.0%
! TTTTCTCGGAATTCTTCCCA+AGG - Chr8:10325740-10325759 None:intergenic 40.0%
! TTTTGCTAGAAGACACCCTT+TGG - Chr8:10324880-10324899 None:intergenic 40.0%
!! GTTGGTTTGAATTGGAAGGT+TGG + Chr8:10322636-10322655 MsG0880042543.01.T01:intron 40.0%
!! TTTGCATTTTTCAGAAGGGG+AGG - Chr8:10323888-10323907 None:intergenic 40.0%
!!! AAAGCCTTTTTCAACCACGT+GGG - Chr8:10325483-10325502 None:intergenic 40.0%
!!! TGGAGGGATTATTTTTTGCG+AGG + Chr8:10321200-10321219 MsG0880042543.01.T01:five_prime_UTR 40.0%
AATAGCAGGGGTTGTTAAGG+AGG + Chr8:10326029-10326048 MsG0880042543.01.T01:CDS 45.0%
ACCTGTCAGTAATATGCCGA+TGG - Chr8:10322704-10322723 None:intergenic 45.0%
ACTAGGCTACCTGTGAAGTA+TGG - Chr8:10323990-10324009 None:intergenic 45.0%
AGAAGAAGGCCTAATACGGA+CGG + Chr8:10325302-10325321 MsG0880042543.01.T01:intron 45.0%
AGATACCAGAAGCTTCATGC+AGG + Chr8:10326444-10326463 MsG0880042543.01.T01:intron 45.0%
AGCGATATGGCATGCTAAGA+TGG - Chr8:10323127-10323146 None:intergenic 45.0%
ATAGCTGTTCCAAGAGCAGT+CGG - Chr8:10321761-10321780 None:intergenic 45.0%
CAAGAGATGATGTAGGAAGG+AGG - Chr8:10323843-10323862 None:intergenic 45.0%
CAATCCTACCTAGAGCGATA+TGG - Chr8:10323140-10323159 None:intergenic 45.0%
CACAATAGCAGGGGTTGTTA+AGG + Chr8:10326026-10326045 MsG0880042543.01.T01:CDS 45.0%
CACAGGCAAAGAAAAGGATC+AGG - Chr8:10325568-10325587 None:intergenic 45.0%
CGAATGCAACAGTTTATGCG+TGG + Chr8:10325151-10325170 MsG0880042543.01.T01:intron 45.0%
GAACCGCTTGCATTACAAAG+TGG - Chr8:10321121-10321140 None:intergenic 45.0%
GACCAGAAGAAGGCCTAATA+CGG + Chr8:10325298-10325317 MsG0880042543.01.T01:intron 45.0%
GAGATGGATGAACAAGATGG+TGG + Chr8:10326525-10326544 MsG0880042543.01.T01:CDS 45.0%
GAGCTATGTAGCTCCAGTAA+TGG + Chr8:10325679-10325698 MsG0880042543.01.T01:CDS 45.0%
GAGGAGATGGATGAACAAGA+TGG + Chr8:10326522-10326541 MsG0880042543.01.T01:CDS 45.0%
GATAATCACACCTTGAGGTG+TGG + Chr8:10324837-10324856 MsG0880042543.01.T01:intron 45.0%
GGGTAAGAGGAAGAATTGAG+CGG - Chr8:10323814-10323833 None:intergenic 45.0%
GGTTTGAATTGGAAGGTTGG+AGG + Chr8:10322639-10322658 MsG0880042543.01.T01:intron 45.0%
GTGTGGACAAAATCCATGAC+TGG - Chr8:10325046-10325065 None:intergenic 45.0%
TAACCCCACGTGGTTGAAAA+AGG + Chr8:10325476-10325495 MsG0880042543.01.T01:intron 45.0%
TAAGAGGAAGAATTGAGCGG+AGG - Chr8:10323811-10323830 None:intergenic 45.0%
TACCTAACCACTGAGCTTGT+AGG - Chr8:10322822-10322841 None:intergenic 45.0%
TCCATATAACTAACCCCACG+TGG + Chr8:10325466-10325485 MsG0880042543.01.T01:intron 45.0%
TCCATCGGCATATTACTGAC+AGG + Chr8:10322700-10322719 MsG0880042543.01.T01:CDS 45.0%
TGAAAGGCAAAGTCCATCTG+TGG - Chr8:10321730-10321749 None:intergenic 45.0%
TGCGATTTACCGTCCGTATT+AGG - Chr8:10325314-10325333 None:intergenic 45.0%
TGGAGCTACATAGCTCATCA+AGG - Chr8:10325675-10325694 None:intergenic 45.0%
TGTCCACACAGCTATAAGAC+TGG + Chr8:10325057-10325076 MsG0880042543.01.T01:intron 45.0%
TTAGCATGCCATATCGCTCT+AGG + Chr8:10323129-10323148 MsG0880042543.01.T01:intron 45.0%
TTCAGAAGGGGAGGAAGATA+GGG - Chr8:10323879-10323898 None:intergenic 45.0%
TTCCTACAAGCTCAGTGGTT+AGG + Chr8:10322817-10322836 MsG0880042543.01.T01:intron 45.0%
TTTCAGAAGGGGAGGAAGAT+AGG - Chr8:10323880-10323899 None:intergenic 45.0%
! AGTGGAGAACAATTTGGTGG+AGG + Chr8:10324357-10324376 MsG0880042543.01.T01:intron 45.0%
! ATGCTTGCTGCTGTTATGTC+TGG + Chr8:10323615-10323634 MsG0880042543.01.T01:CDS 45.0%
! CATATCGCTCTAGGTAGGAT+TGG + Chr8:10323138-10323157 MsG0880042543.01.T01:intron 45.0%
! GTGGAGAACAATTTGGTGGA+GGG + Chr8:10324358-10324377 MsG0880042543.01.T01:intron 45.0%
! TACTACTGTAAGGGTGTGCT+TGG - Chr8:10323078-10323097 None:intergenic 45.0%
! TGCTGTTTGTGTGTAGGTTG+CGG + Chr8:10326210-10326229 MsG0880042543.01.T01:intron 45.0%
! TGCTTGCTGCTGTTATGTCT+GGG + Chr8:10323616-10323635 MsG0880042543.01.T01:CDS 45.0%
! TGGAGAACAATTTGGTGGAG+GGG + Chr8:10324359-10324378 MsG0880042543.01.T01:intron 45.0%
! TTCTGTAGGGTATCTTTGGG+TGG + Chr8:10322851-10322870 MsG0880042543.01.T01:intron 45.0%
! TTGCCAGTCTTATAGCTGTG+TGG - Chr8:10325063-10325082 None:intergenic 45.0%
! TTTTAGCAAGCCACACCTCA+AGG - Chr8:10324850-10324869 None:intergenic 45.0%
!! ACCACGTGGGGTTAGTTATA+TGG - Chr8:10325470-10325489 None:intergenic 45.0%
!! GAGCATTGGCGTTGATGATA+TGG - Chr8:10327065-10327084 None:intergenic 45.0%
!! TGGCGTTGATGATATGGCTA+AGG - Chr8:10327059-10327078 None:intergenic 45.0%
!!! AAGCCTTTTTCAACCACGTG+GGG - Chr8:10325482-10325501 None:intergenic 45.0%
!!! ATTGGTTGTGCCGTTTTCTG+TGG + Chr8:10321587-10321606 MsG0880042543.01.T01:intron 45.0%
!!! CAAAGCCTTTTTCAACCACG+TGG - Chr8:10325484-10325503 None:intergenic 45.0%
!! ATATATAAATATACAATAAT+AGG - Chr8:10324499-10324518 None:intergenic 5.0%
!! GAATATATATATATATATAT+AGG - Chr8:10324904-10324923 None:intergenic 5.0%
!! TATATAAATATACAATAATA+GGG - Chr8:10324498-10324517 None:intergenic 5.0%
!!! AATGAAATAATTTATTTTTT+TGG + Chr8:10321869-10321888 MsG0880042543.01.T01:intron 5.0%
!!! ATTGTATTAAAATATTTTTT+TGG + Chr8:10327214-10327233 MsG0880042543.01.T01:three_prime_UTR 5.0%
ACGAGTAATAGGCCATCCAC+TGG - Chr8:10326115-10326134 None:intergenic 50.0%
ACTTCTATGCTTCGGCCTCA+AGG - Chr8:10324320-10324339 None:intergenic 50.0%
AGGAAGAATTGAGCGGAGGA+GGG - Chr8:10323807-10323826 None:intergenic 50.0%
ATATGGCTAAGGCAAGTCCC+TGG - Chr8:10327048-10327067 None:intergenic 50.0%
ATGGCTTCCTACAAGCTCAG+TGG + Chr8:10322812-10322831 MsG0880042543.01.T01:intron 50.0%
CAACACAGTGTGCAGTTTGG+CGG - Chr8:10323934-10323953 None:intergenic 50.0%
CCCTGCTATTGTGACTGTGA+CGG - Chr8:10326019-10326038 None:intergenic 50.0%
CCGTCACAGTCACAATAGCA+GGG + Chr8:10326016-10326035 MsG0880042543.01.T01:CDS 50.0%
CGTCACAGTCACAATAGCAG+GGG + Chr8:10326017-10326036 MsG0880042543.01.T01:CDS 50.0%
CTGTTATGTCTGGGTTTCGC+TGG + Chr8:10323625-10323644 MsG0880042543.01.T01:CDS 50.0%
GACTGCTCTTGGAACAGCTA+TGG + Chr8:10321760-10321779 MsG0880042543.01.T01:exon 50.0%
GCACAACACAGTGTGCAGTT+TGG - Chr8:10323937-10323956 None:intergenic 50.0%
GCTATGTTTAACGGTGACGC+CGG + Chr8:10324288-10324307 MsG0880042543.01.T01:intron 50.0%
GCTTCAGGGTAGAAGATCAG+CGG - Chr8:10321641-10321660 None:intergenic 50.0%
GCTTCATGCAGGTGACAATG+TGG + Chr8:10326455-10326474 MsG0880042543.01.T01:CDS 50.0%
GGCTACCTGTGAAGTATGGA+CGG - Chr8:10323986-10324005 None:intergenic 50.0%
GTCCGTATTAGGCCTTCTTC+TGG - Chr8:10325303-10325322 None:intergenic 50.0%
TAAGGAGGCCGTCACCATAT+TGG + Chr8:10326044-10326063 MsG0880042543.01.T01:CDS 50.0%
TACGGACGGTAAATCGCATG+TGG + Chr8:10325316-10325335 MsG0880042543.01.T01:intron 50.0%
TAGCTGTTCCAAGAGCAGTC+GGG - Chr8:10321760-10321779 None:intergenic 50.0%
TGCTAGAAGACACCCTTTGG+AGG - Chr8:10324877-10324896 None:intergenic 50.0%
TGTAGCTCCAGTAATGGCTG+TGG + Chr8:10325685-10325704 MsG0880042543.01.T01:CDS 50.0%
TGTCACCTGCATGAAGCTTC+TGG - Chr8:10326452-10326471 None:intergenic 50.0%
TTGGACCGTCCATACTTCAC+AGG + Chr8:10323978-10323997 MsG0880042543.01.T01:intron 50.0%
! CATGCCATATCGCTCTAGGT+AGG + Chr8:10323133-10323152 MsG0880042543.01.T01:intron 50.0%
! CTTTGGGTGGAGGATTTTGG+AGG + Chr8:10322864-10322883 MsG0880042543.01.T01:intron 50.0%
! GTAAGGGTGTGCTTGGATAG+AGG - Chr8:10323071-10323090 None:intergenic 50.0%
! TGTAGGGTATCTTTGGGTGG+AGG + Chr8:10322854-10322873 MsG0880042543.01.T01:intron 50.0%
!! AGGATTTTGGAGGAGAGTGG+GGG + Chr8:10322874-10322893 MsG0880042543.01.T01:intron 50.0%
!! GAGGATTTTGGAGGAGAGTG+GGG + Chr8:10322873-10322892 MsG0880042543.01.T01:intron 50.0%
!! GGAGGATTTTGGAGGAGAGT+GGG + Chr8:10322872-10322891 MsG0880042543.01.T01:intron 50.0%
!! TGGAGGATTTTGGAGGAGAG+TGG + Chr8:10322871-10322890 MsG0880042543.01.T01:intron 50.0%
ACAGTTGTCCCGACTGCTCT+TGG + Chr8:10321749-10321768 MsG0880042543.01.T01:five_prime_UTR 55.0%
GAGCTTGTAGGAAGCCATGC+TGG - Chr8:10322810-10322829 None:intergenic 55.0%
GAGGAAGAATTGAGCGGAGG+AGG - Chr8:10323808-10323827 None:intergenic 55.0%
GCAGTCGGGACAACTGTGAA+AGG - Chr8:10321746-10321765 None:intergenic 55.0%
GCCGTCACAGTCACAATAGC+AGG + Chr8:10326015-10326034 MsG0880042543.01.T01:CDS 55.0%
GGGGAGGAAGATAGGGTTGA+TGG - Chr8:10323872-10323891 None:intergenic 55.0%
TTCGGCCTCAAGGTTGTAGC+CGG - Chr8:10324310-10324329 None:intergenic 55.0%
!! GGATTTTGGAGGAGAGTGGG+GGG + Chr8:10322875-10322894 MsG0880042543.01.T01:intron 55.0%
GCGGTTGCCACAGCCATTAC+TGG - Chr8:10325695-10325714 None:intergenic 60.0%
! TGACGCCGGCTACAACCTTG+AGG + Chr8:10324302-10324321 MsG0880042543.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 10320942 10327316 10320942 ID=MsG0880042543.01;Name=MsG0880042543.01
Chr8 mRNA 10320942 10327316 10320942 ID=MsG0880042543.01.T01;Parent=MsG0880042543.01;Name=MsG0880042543.01.T01;_AED=0.40;_eAED=0.46;_QI=240|0.7|0.63|1|0.6|0.45|11|349|302
Chr8 exon 10320942 10320949 10320942 ID=MsG0880042543.01.T01:exon:4206;Parent=MsG0880042543.01.T01
Chr8 exon 10321052 10321237 10321052 ID=MsG0880042543.01.T01:exon:4207;Parent=MsG0880042543.01.T01
Chr8 exon 10321733 10321838 10321733 ID=MsG0880042543.01.T01:exon:4208;Parent=MsG0880042543.01.T01
Chr8 exon 10321990 10322039 10321990 ID=MsG0880042543.01.T01:exon:4209;Parent=MsG0880042543.01.T01
Chr8 exon 10322654 10322721 10322654 ID=MsG0880042543.01.T01:exon:4210;Parent=MsG0880042543.01.T01
Chr8 exon 10323571 10323722 10323571 ID=MsG0880042543.01.T01:exon:4211;Parent=MsG0880042543.01.T01
Chr8 exon 10325551 10325838 10325551 ID=MsG0880042543.01.T01:exon:4212;Parent=MsG0880042543.01.T01
Chr8 exon 10325979 10326065 10325979 ID=MsG0880042543.01.T01:exon:4213;Parent=MsG0880042543.01.T01
Chr8 exon 10326226 10326320 10326226 ID=MsG0880042543.01.T01:exon:4214;Parent=MsG0880042543.01.T01
Chr8 exon 10326446 10326588 10326446 ID=MsG0880042543.01.T01:exon:4215;Parent=MsG0880042543.01.T01
Chr8 exon 10327002 10327316 10327002 ID=MsG0880042543.01.T01:exon:4216;Parent=MsG0880042543.01.T01
Chr8 five_prime_UTR 10320942 10320949 10320942 ID=MsG0880042543.01.T01:five_prime_utr;Parent=MsG0880042543.01.T01
Chr8 five_prime_UTR 10321052 10321237 10321052 ID=MsG0880042543.01.T01:five_prime_utr;Parent=MsG0880042543.01.T01
Chr8 five_prime_UTR 10321733 10321778 10321733 ID=MsG0880042543.01.T01:five_prime_utr;Parent=MsG0880042543.01.T01
Chr8 CDS 10321779 10321838 10321779 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10321990 10322039 10321990 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10322654 10322721 10322654 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10323571 10323722 10323571 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10325551 10325838 10325551 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10325979 10326065 10325979 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10326226 10326320 10326226 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 CDS 10326446 10326554 10326446 ID=MsG0880042543.01.T01:cds;Parent=MsG0880042543.01.T01
Chr8 three_prime_UTR 10326555 10326588 10326555 ID=MsG0880042543.01.T01:three_prime_utr;Parent=MsG0880042543.01.T01
Chr8 three_prime_UTR 10327002 10327316 10327002 ID=MsG0880042543.01.T01:three_prime_utr;Parent=MsG0880042543.01.T01
Gene Sequence

>MsG0880042543.01.T01

ATGGATGTTAACTTGAGCAATGCATCTCTAGTTTTCATCTCTGTCACATTTGCTACAATGTGTAAATCTGCTGCTCCAATCTTTCTCCTCTTGTTTGCTTTTGCTTTCCGGTTGGAGGTACCAAGTTTTAAACTATCAGGAATCATTTTAGTCATCTCCATCGGCATATTACTGACAGTTTCAAAAGAAACAGAATTTGAAATTTGGGGATTTGTACTTGTCATGCTTGCTGCTGTTATGTCTGGGTTTCGCTGGTGTATGACTCAGATCCTTTTGCAGGTATTATATATGCCTTTTCATTTTCTTATATTATTGTTGGGAGCGTATCTGATAGCACTATCTTTCCTGATCCTTTTCTTTGCCTGTGTTTATCTTCTACTTGTAAGTTTGTACATTCTGTTTTATATTTATATACTTTTTCCAATGACTTCAGGTCTGAAAAATCCACTTACCTTGATGAGCTATGTAGCTCCAGTAATGGCTGTGGCAACCGCACTTCTTTCTCTTGCATTAGATCCTTGGGAAGAATTCCGAGAAAATGAGTACTTTGATAGTTCATGGCATATAACTCGAAGTTTCTTGCTGATGTTCTTTGGTGGAACACTTGCCTTTTTTATGGTACTGACAGAATATATTTTAGTCTCTGTAACTAGTGCCGTCACAGTCACAATAGCAGGGGTTGTTAAGGAGGCCGTCACCATATTGGTTGCGGTATTATACTTTCATGATGCGTTTACTTGGTTGAAAGGATTTGGCCTATTCACTATTATGGTTGGTGTCAGTTTGTTTAATGTGTACAAATACCAGAAGCTTCATGCAGGTGACAATGTGGCAGATCATCATACAAAAGATTCGGCAGCCAAATATGTTATTCTTGAGGAGATGGATGAACAAGATGGTGGCATCTGA

Protein sequence

>MsG0880042543.01.T01

MDVNLSNASLVFISVTFATMCKSAAPIFLLLFAFAFRLEVPSFKLSGIILVISIGILLTVSKETEFEIWGFVLVMLAAVMSGFRWCMTQILLQVLYMPFHFLILLLGAYLIALSFLILFFACVYLLLVSLYILFYIYILFPMTSGLKNPLTLMSYVAPVMAVATALLSLALDPWEEFRENEYFDSSWHITRSFLLMFFGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVLYFHDAFTWLKGFGLFTIMVGVSLFNVYKYQKLHAGDNVADHHTKDSAAKYVILEEMDEQDGGI*