AlfalfaGEDB | MsG0280011450.01

M. sativa cultivar ZhongmuNo.1 / MsG0280011450.01

KEGG: -
GO: GO:0046983
PFAM: PF00010

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011450.01.T01	AES68218.2	77.5	280	46	5	1	273	1	270	1.74E-145	419

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011450.01.T01	Q9T072	39.157	166	96	4	103	267	152	313	2.77E-26	108

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049040.01	MsG0280011450.01	0.819855	9.327452e-53	7.261871e-50
MsG0080049068.01	MsG0280011450.01	0.805625	1.219502e-49	6.482950e-47
MsG0180001270.01	MsG0280011450.01	0.813178	2.919277e-51	1.892834e-48
MsG0280011450.01	MsG0380017703.01	0.800787	1.223107e-48	5.745589e-46
MsG0280011450.01	MsG0480019284.01	0.800357	1.496727e-48	6.955140e-46
MsG0280011450.01	MsG0480021814.01	0.800241	1.580797e-48	7.323757e-46
MsG0280011450.01	MsG0580024873.01	0.805771	1.136711e-49	6.065722e-47
MsG0280011450.01	MsG0580029312.01	0.808590	2.874694e-50	1.650150e-47
MsG0280011450.01	MsG0680031469.01	0.812380	4.365997e-51	2.771651e-48
MsG0280011450.01	MsG0680034064.01	0.800869	1.177238e-48	5.541946e-46
MsG0280011450.01	MsG0780038948.01	0.815401	9.421552e-52	6.489077e-49
MsG0280011450.01	MsG0880044392.01	0.811966	5.375223e-51	3.374159e-48
MsG0280011450.01	MsG0880045558.01	0.814695	1.351645e-51	9.132359e-49
MsG0280011450.01	MsG0880047703.01	0.813497	2.484785e-51	1.625339e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011450.01.T01	MTR_2g104500	77.500	280	46	5	1	273	1	270	2.11e-149	419
MsG0280011450.01.T01	MTR_2g104530	63.273	275	62	9	1	258	1	253	5.00e-102	299
MsG0280011450.01.T01	MTR_2g104490	42.705	281	132	9	2	260	16	289	4.78e-52	172
MsG0280011450.01.T01	MTR_2g104490	42.294	279	132	9	2	258	16	287	3.55e-51	170
MsG0280011450.01.T01	MTR_2g104550	42.199	282	134	11	1	258	15	291	8.71e-51	169
MsG0280011450.01.T01	MTR_4g009540	42.396	217	114	4	50	258	97	310	3.97e-44	152
MsG0280011450.01.T01	MTR_4g009540	41.935	217	115	4	50	258	97	310	2.99e-43	150
MsG0280011450.01.T01	MTR_4g009110	40.909	220	117	3	50	258	112	329	6.89e-43	150
MsG0280011450.01.T01	MTR_8g009020	48.148	162	76	4	103	258	143	302	2.38e-36	132
MsG0280011450.01.T01	MTR_2g104560	44.048	168	82	5	104	268	55	213	1.30e-34	125
MsG0280011450.01.T01	MTR_8g069740	35.185	270	145	8	9	257	5	265	1.98e-33	123
MsG0280011450.01.T01	MTR_5g014600	41.176	187	98	4	103	278	149	334	8.01e-32	120
MsG0280011450.01.T01	MTR_5g014520	38.596	171	101	2	96	266	150	316	6.58e-29	112
MsG0280011450.01.T01	MTR_2g104590	42.262	168	75	4	101	268	67	212	5.86e-28	107
MsG0280011450.01.T01	MTR_2g010450	34.807	181	110	4	89	268	166	339	1.32e-27	109
MsG0280011450.01.T01	MTR_5g014640	34.343	198	120	4	62	258	115	303	2.31e-27	108
MsG0280011450.01.T01	MTR_0246s0020	33.478	230	128	6	67	273	142	369	2.06e-26	106
MsG0280011450.01.T01	MTR_4g092700	34.940	166	104	2	103	268	158	319	2.96e-26	105
MsG0280011450.01.T01	MTR_6g047570	32.377	244	142	5	43	279	98	325	2.09e-25	103
MsG0280011450.01.T01	MTR_2g104650	35.125	279	138	10	8	268	4	257	3.83e-25	101
MsG0280011450.01.T01	MTR_0250s0040	36.306	157	95	2	103	258	88	240	4.08e-25	101
MsG0280011450.01.T01	MTR_7g080780	36.449	214	112	5	54	258	110	308	1.35e-24	101
MsG0280011450.01.T01	MTR_4g097940	35.135	185	107	4	99	277	151	328	1.36e-24	100
MsG0280011450.01.T01	MTR_7g080780	36.449	214	112	5	54	258	97	295	1.36e-24	100
MsG0280011450.01.T01	MTR_0246s0020	33.482	224	123	7	67	267	142	362	2.38e-24	101
MsG0280011450.01.T01	MTR_0011s0260	37.580	157	93	3	103	258	183	335	2.77e-24	100
MsG0280011450.01.T01	MTR_8g009010	41.401	157	52	3	103	258	134	251	4.09e-24	99.8
MsG0280011450.01.T01	MTR_0011s0210	34.615	156	99	1	103	258	183	335	2.38e-23	98.2
MsG0280011450.01.T01	MTR_7g451650	40.541	148	63	3	131	272	62	190	2.50e-23	94.7
MsG0280011450.01.T01	MTR_5g014560	35.519	183	109	3	89	266	112	290	1.66e-22	95.1
MsG0280011450.01.T01	MTR_7g050350	42.748	131	50	3	133	257	2	113	7.09e-22	89.0
MsG0280011450.01.T01	MTR_7g451650	42.748	131	50	3	133	257	2	113	7.09e-22	89.0
MsG0280011450.01.T01	MTR_7g451650	42.537	134	52	3	131	258	62	176	7.17e-22	90.9
MsG0280011450.01.T01	MTR_4g066460	34.254	181	101	5	83	258	137	304	2.99e-21	92.0
MsG0280011450.01.T01	MTR_0246s0050	29.864	221	138	5	49	268	101	305	5.34e-21	91.3
MsG0280011450.01.T01	MTR_4g098035	29.864	221	138	5	49	268	122	326	5.53e-21	91.3
MsG0280011450.01.T01	MTR_4g097920	35.404	161	97	2	99	258	136	290	6.70e-21	90.5
MsG0280011450.01.T01	MTR_4g097920	35.404	161	97	2	99	258	151	305	7.49e-21	90.9
MsG0280011450.01.T01	MTR_4g009510	39.189	148	71	4	114	258	53	184	1.46e-20	87.4
MsG0280011450.01.T01	MTR_4g067010	34.302	172	105	4	87	258	133	296	3.78e-20	89.0
MsG0280011450.01.T01	MTR_4g097950	34.043	188	93	4	103	276	70	240	4.78e-20	87.4
MsG0280011450.01.T01	MTR_4g009420	38.776	147	68	3	114	260	54	178	1.03e-19	85.1
MsG0280011450.01.T01	MTR_4g009420	37.931	145	68	3	114	258	54	176	8.88e-19	82.4
MsG0280011450.01.T01	MTR_4g066380	33.708	178	101	3	89	258	133	301	6.70e-16	77.0
MsG0280011450.01.T01	MTR_5g014550	34.074	135	78	2	132	262	53	180	3.57e-14	70.1
MsG0280011450.01.T01	MTR_8g098275	24.766	214	124	6	78	259	279	487	6.81e-12	65.9
MsG0280011450.01.T01	MTR_8g098275	24.766	214	124	6	78	259	372	580	8.57e-12	65.5
MsG0280011450.01.T01	MTR_8g098275	24.766	214	124	6	78	259	215	423	9.64e-12	65.1
MsG0280011450.01.T01	MTR_1g072320	27.815	151	86	3	101	237	468	609	2.68e-11	64.3
MsG0280011450.01.T01	MTR_6g047550	31.852	135	79	3	43	170	112	240	2.70e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011450.01.T01	AT4G37850	39.157	166	96	4	103	267	152	313	2.82e-27	108
MsG0280011450.01.T01	AT4G37850	39.157	166	96	4	103	267	152	313	2.82e-27	108
MsG0280011450.01.T01	AT2G22760	37.037	162	100	2	103	263	119	279	1.63e-26	105
MsG0280011450.01.T01	AT2G22760	36.747	166	102	3	103	267	119	282	4.21e-26	104
MsG0280011450.01.T01	AT2G22770	35.955	178	101	3	103	268	132	308	2.24e-23	97.8
MsG0280011450.01.T01	AT2G22750	35.196	179	90	4	103	268	126	291	1.33e-18	84.3
MsG0280011450.01.T01	AT2G22750	35.196	179	90	4	103	268	154	319	1.66e-18	84.3
MsG0280011450.01.T01	AT2G22750	35.196	179	90	4	103	268	150	315	2.04e-18	84.0
MsG0280011450.01.T01	AT2G22750	35.714	168	83	3	103	257	126	281	2.93e-18	83.2
MsG0280011450.01.T01	AT2G22750	35.714	168	83	3	103	257	154	309	3.21e-18	83.6
MsG0280011450.01.T01	AT4G09820	33.529	170	77	6	102	265	362	501	1.16e-13	71.2
MsG0280011450.01.T01	AT1G63650	29.050	179	111	3	103	266	405	582	2.14e-13	70.5
MsG0280011450.01.T01	AT1G63650	29.050	179	111	3	103	266	405	582	2.14e-13	70.5
MsG0280011450.01.T01	AT1G63650	29.050	179	111	3	103	266	405	582	2.14e-13	70.5
MsG0280011450.01.T01	AT5G41315	26.316	190	119	4	95	264	438	626	7.33e-12	65.9
MsG0280011450.01.T01	AT5G41315	26.316	190	119	4	95	264	441	629	8.12e-12	65.9
MsG0280011450.01.T01	AT5G41315	26.316	190	119	4	95	264	433	621	8.94e-12	65.5

Find 48 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAATAGTTAATGAAAATT+TGG	0.144317	2:-84173600	None:intergenic
CTAACTCCTTCACTCGTTTC+TGG	0.173101	2:-84173262	None:intergenic
TAGAGCTTGCATTATCTCTT+TGG	0.266677	2:+84172363	MsG0280011450.01.T01:CDS
ATCAATTGTGAGAAGGAAAA+TGG	0.286777	2:+84173458	MsG0280011450.01.T01:CDS
ACAACGTGGTGGTTTGGATT+TGG	0.302005	2:-84172422	None:intergenic
CTGGAGTTGCTCCACGTAAT+TGG	0.302982	2:-84173243	None:intergenic
TGGCATTCAACACAAAATAT+TGG	0.325928	2:+84173478	MsG0280011450.01.T01:CDS
AGAGATCTAATAATTGCTTT+TGG	0.331987	2:-84172487	None:intergenic
ATGAATCTTGACAATTATCT+TGG	0.345786	2:+84173374	MsG0280011450.01.T01:CDS
AGACTTCCTTTGTGACTTCA+TGG	0.350365	2:+84172246	MsG0280011450.01.T01:CDS
GCAATGGCAGCTCCAGCTAC+TGG	0.359273	2:-84172274	None:intergenic
GACAAAGCTTCTATCGTTGC+TGG	0.389114	2:+84173215	MsG0280011450.01.T01:CDS
CCGTTTGGCAATTCAACTCT+TGG	0.391384	2:+84173548	MsG0280011450.01.T01:CDS
ACATCAGGAAGCAATTCATT+TGG	0.411022	2:-84173398	None:intergenic
TTCTTATTGAGAAGTATCAT+TGG	0.433422	2:-84173314	None:intergenic
GACACTTTCACTTTGACATC+AGG	0.450201	2:-84173413	None:intergenic
TGTGGGACAACGTGGTGGTT+TGG	0.461838	2:-84172428	None:intergenic
AGCACTAGCACATTGCCGTT+TGG	0.467143	2:+84173533	MsG0280011450.01.T01:CDS
TTCATGGCACAGCCAGTAGC+TGG	0.474815	2:+84172262	MsG0280011450.01.T01:CDS
ACGCAATGGGAGAGAGGAAA+AGG	0.480162	2:+84172515	MsG0280011450.01.T01:CDS
TTGGATTTGGACATCACAGC+TGG	0.517868	2:-84172409	None:intergenic
GTGGACGGAGGAAGAAGCTC+CGG	0.531427	2:-84172334	None:intergenic
AATGCAAGCTCTAGAGGATG+TGG	0.535694	2:-84172353	None:intergenic
AGATCTCTAGATCACGCAAT+GGG	0.542864	2:+84172502	MsG0280011450.01.T01:CDS
AAAGGAAGTCTTCATCTTCG+TGG	0.550705	2:-84172234	None:intergenic
AAGATTCATTTCACTAGATG+TGG	0.558723	2:-84173360	None:intergenic
AGAGATAATGCAAGCTCTAG+AGG	0.565903	2:-84172359	None:intergenic
ACGCTCGGTAGCAGCAGCAA+TGG	0.570572	2:-84172290	None:intergenic
CCAAGAGTTGAATTGCCAAA+CGG	0.575048	2:-84173548	None:intergenic
TGTAGTCTCTGATGAGTCAC+CGG	0.575944	2:+84172315	MsG0280011450.01.T01:CDS
ATTAGTACCTTGTTTGAGCG+AGG	0.577779	2:-84172583	None:intergenic
AGCTGGTAACAGTATCTTCG+CGG	0.585382	2:-84172392	None:intergenic
AAATTTGGTGATGCGAACCT+TGG	0.588692	2:-84173585	None:intergenic
ATCAGAGACTACAATACGCT+CGG	0.591680	2:-84172305	None:intergenic
CATTTACATCAATTGTGAGA+AGG	0.601314	2:+84173451	MsG0280011450.01.T01:CDS
AAACGGCAATGTGCTAGTGC+TGG	0.603776	2:-84173531	None:intergenic
TATTATTCCTCGCTCAAACA+AGG	0.615369	2:+84172576	MsG0280011450.01.T01:CDS
TAGATCACGCAATGGGAGAG+AGG	0.615416	2:+84172509	MsG0280011450.01.T01:CDS
TAGATCTCTAGATCACGCAA+TGG	0.625523	2:+84172501	MsG0280011450.01.T01:CDS
TGGCATAACTATCATCGCCA+AGG	0.626059	2:+84173568	MsG0280011450.01.T01:CDS
GAAGTACAACAAAACAAGAG+AGG	0.647529	2:+84173284	MsG0280011450.01.T01:CDS
TGCTGGCGCAACCAATTACG+TGG	0.650808	2:+84173232	MsG0280011450.01.T01:CDS
GACTTCTGAGAATCGAAACA+TGG	0.657951	2:+84172462	MsG0280011450.01.T01:CDS
TGATGTCAAAGTGAAAGTGT+CGG	0.659461	2:+84173415	MsG0280011450.01.T01:CDS
GCAACTCCAGAAACGAGTGA+AGG	0.675689	2:+84173256	MsG0280011450.01.T01:CDS
CAAGCTCTAGAGGATGTGGA+CGG	0.686043	2:-84172349	None:intergenic
GCTCTAGAGGATGTGGACGG+AGG	0.694196	2:-84172346	None:intergenic
GCTGTGCCATGAAGTCACAA+AGG	0.700598	2:-84172252	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTAAATACATTAATAATTT+GGG	-	Chr2:84173178-84173197	None:intergenic	10.0%
!!	TTGTAAATACATTAATAATT+TGG	-	Chr2:84173179-84173198	None:intergenic	10.0%
!!	TTCAATAGTTAATGAAAATT+TGG	-	Chr2:84173603-84173622	None:intergenic	15.0%
!!!	ATTATTTTTTTGATAAGCAA+AGG	-	Chr2:84172642-84172661	None:intergenic	15.0%
!!!	CCATTTTAAAACATTTTTTA+AGG	-	Chr2:84173030-84173049	None:intergenic	15.0%
!!!	CCTTAAAAAATGTTTTAAAA+TGG	+	Chr2:84173027-84173046	MsG0280011450.01.T01:intron	15.0%
!!!	TGAAATGAATATGTTTTTAA+GGG	+	Chr2:84173619-84173638	MsG0280011450.01.T01:CDS	15.0%
!!!	TTGAAATGAATATGTTTTTA+AGG	+	Chr2:84173618-84173637	MsG0280011450.01.T01:CDS	15.0%
!!	TAGAAAATAAAGACCAATAT+AGG	+	Chr2:84173004-84173023	MsG0280011450.01.T01:intron	20.0%
!	ATGAATCTTGACAATTATCT+TGG	+	Chr2:84173374-84173393	MsG0280011450.01.T01:CDS	25.0%
!	CTCAATAAGAAAAATTCTTG+TGG	+	Chr2:84173326-84173345	MsG0280011450.01.T01:CDS	25.0%
!!	AGAGATCTAATAATTGCTTT+TGG	-	Chr2:84172490-84172509	None:intergenic	25.0%
!!	TAATTTGGGATGTCTAATAT+CGG	-	Chr2:84173164-84173183	None:intergenic	25.0%
!!!	ACATTTTTTAAGGCCTATAT+TGG	-	Chr2:84173020-84173039	None:intergenic	25.0%
!!!	TTCTTATTGAGAAGTATCAT+TGG	-	Chr2:84173317-84173336	None:intergenic	25.0%
	AAAACATCTCTTCAAATCGT+TGG	+	Chr2:84172780-84172799	MsG0280011450.01.T01:intron	30.0%
	AAGATTCATTTCACTAGATG+TGG	-	Chr2:84173363-84173382	None:intergenic	30.0%
	AGTAGAATCTACCTTTAAAC+CGG	+	Chr2:84173137-84173156	MsG0280011450.01.T01:intron	30.0%
	ATCAATTGTGAGAAGGAAAA+TGG	+	Chr2:84173458-84173477	MsG0280011450.01.T01:CDS	30.0%
	CATTTACATCAATTGTGAGA+AGG	+	Chr2:84173451-84173470	MsG0280011450.01.T01:CDS	30.0%
	GTATCAACAACAAATGTTGA+GGG	-	Chr2:84172871-84172890	None:intergenic	30.0%
	TGACATAATACCATTCTTCA+GGG	+	Chr2:84172820-84172839	MsG0280011450.01.T01:intron	30.0%
	TGGCATTCAACACAAAATAT+TGG	+	Chr2:84173478-84173497	MsG0280011450.01.T01:CDS	30.0%
	TTGACATAATACCATTCTTC+AGG	+	Chr2:84172819-84172838	MsG0280011450.01.T01:intron	30.0%
!!!	AGAAGTCATCATCTTTTTTG+TGG	-	Chr2:84172449-84172468	None:intergenic	30.0%
!!!	GAAGTCATCATCTTTTTTGT+GGG	-	Chr2:84172448-84172467	None:intergenic	30.0%
!!!	TTTTTTGATAAGCAAAGGCA+AGG	-	Chr2:84172637-84172656	None:intergenic	30.0%
	ACATCAGGAAGCAATTCATT+TGG	-	Chr2:84173401-84173420	None:intergenic	35.0%
	CATATTCAAACCCTGAAGAA+TGG	-	Chr2:84172833-84172852	None:intergenic	35.0%
	GAAGTACAACAAAACAAGAG+AGG	+	Chr2:84173284-84173303	MsG0280011450.01.T01:CDS	35.0%
	GGTATCAACAACAAATGTTG+AGG	-	Chr2:84172872-84172891	None:intergenic	35.0%
	TAGAGCTTGCATTATCTCTT+TGG	+	Chr2:84172363-84172382	MsG0280011450.01.T01:CDS	35.0%
	TATTATTCCTCGCTCAAACA+AGG	+	Chr2:84172576-84172595	MsG0280011450.01.T01:CDS	35.0%
!	TGATGTCAAAGTGAAAGTGT+CGG	+	Chr2:84173415-84173434	MsG0280011450.01.T01:CDS	35.0%
!!	AATGAGTGTTGAGTTTGGAA+GGG	-	Chr2:84172914-84172933	None:intergenic	35.0%
	AAAGGAAGTCTTCATCTTCG+TGG	-	Chr2:84172237-84172256	None:intergenic	40.0%
	AGACTTCCTTTGTGACTTCA+TGG	+	Chr2:84172246-84172265	MsG0280011450.01.T01:CDS	40.0%
	AGATCTCTAGATCACGCAAT+GGG	+	Chr2:84172502-84172521	MsG0280011450.01.T01:CDS	40.0%
	ATCAGAGACTACAATACGCT+CGG	-	Chr2:84172308-84172327	None:intergenic	40.0%
	CCAAGAGTTGAATTGCCAAA+CGG	-	Chr2:84173551-84173570	None:intergenic	40.0%
	CTAATATCGGTCCGGTTTAA+AGG	-	Chr2:84173151-84173170	None:intergenic	40.0%
	GACACTTTCACTTTGACATC+AGG	-	Chr2:84173416-84173435	None:intergenic	40.0%
	TAGATCTCTAGATCACGCAA+TGG	+	Chr2:84172501-84172520	MsG0280011450.01.T01:CDS	40.0%
!	AGAGATAATGCAAGCTCTAG+AGG	-	Chr2:84172362-84172381	None:intergenic	40.0%
!	ATTAGTACCTTGTTTGAGCG+AGG	-	Chr2:84172586-84172605	None:intergenic	40.0%
!	GACTTCTGAGAATCGAAACA+TGG	+	Chr2:84172462-84172481	MsG0280011450.01.T01:CDS	40.0%
!!	AAATTTGGTGATGCGAACCT+TGG	-	Chr2:84173588-84173607	None:intergenic	40.0%
!!	CAATGAGTGTTGAGTTTGGA+AGG	-	Chr2:84172915-84172934	None:intergenic	40.0%
!!	CTTGCAATGAGTGTTGAGTT+TGG	-	Chr2:84172919-84172938	None:intergenic	40.0%
!!!	ATCTTTTTTGTGGGACAACG+TGG	-	Chr2:84172439-84172458	None:intergenic	40.0%
	AAGGGAAGAATGAGGAGGTT+TGG	-	Chr2:84172896-84172915	None:intergenic	45.0%
	AGCTGGTAACAGTATCTTCG+CGG	-	Chr2:84172395-84172414	None:intergenic	45.0%
	CCGTTTGGCAATTCAACTCT+TGG	+	Chr2:84173548-84173567	MsG0280011450.01.T01:CDS	45.0%
	CTAACTCCTTCACTCGTTTC+TGG	-	Chr2:84173265-84173284	None:intergenic	45.0%
	GACAAAGCTTCTATCGTTGC+TGG	+	Chr2:84173215-84173234	MsG0280011450.01.T01:CDS	45.0%
	GAGTTTGGAAGGGAAGAATG+AGG	-	Chr2:84172904-84172923	None:intergenic	45.0%
	TGGCATAACTATCATCGCCA+AGG	+	Chr2:84173568-84173587	MsG0280011450.01.T01:CDS	45.0%
	TGGGATGTCTAATATCGGTC+CGG	-	Chr2:84173159-84173178	None:intergenic	45.0%
	TGTAGTCTCTGATGAGTCAC+CGG	+	Chr2:84172315-84172334	MsG0280011450.01.T01:CDS	45.0%
	TTGGATTTGGACATCACAGC+TGG	-	Chr2:84172412-84172431	None:intergenic	45.0%
	TTTGGAAGGGAAGAATGAGG+AGG	-	Chr2:84172901-84172920	None:intergenic	45.0%
!	ACAACGTGGTGGTTTGGATT+TGG	-	Chr2:84172425-84172444	None:intergenic	45.0%
!!	AATGCAAGCTCTAGAGGATG+TGG	-	Chr2:84172356-84172375	None:intergenic	45.0%
!!!	TTTTTTGTGGGACAACGTGG+TGG	-	Chr2:84172436-84172455	None:intergenic	45.0%
	AAACGGCAATGTGCTAGTGC+TGG	-	Chr2:84173534-84173553	None:intergenic	50.0%
	ACGCAATGGGAGAGAGGAAA+AGG	+	Chr2:84172515-84172534	MsG0280011450.01.T01:CDS	50.0%
	AGCACTAGCACATTGCCGTT+TGG	+	Chr2:84173533-84173552	MsG0280011450.01.T01:CDS	50.0%
	CTGGAGTTGCTCCACGTAAT+TGG	-	Chr2:84173246-84173265	None:intergenic	50.0%
	GCAACTCCAGAAACGAGTGA+AGG	+	Chr2:84173256-84173275	MsG0280011450.01.T01:CDS	50.0%
	GCTGTGCCATGAAGTCACAA+AGG	-	Chr2:84172255-84172274	None:intergenic	50.0%
	GGAAGAATGAGGAGGTTTGG+TGG	-	Chr2:84172893-84172912	None:intergenic	50.0%
	TAGATCACGCAATGGGAGAG+AGG	+	Chr2:84172509-84172528	MsG0280011450.01.T01:CDS	50.0%
!!	CAAGCTCTAGAGGATGTGGA+CGG	-	Chr2:84172352-84172371	None:intergenic	50.0%
	TGCTGGCGCAACCAATTACG+TGG	+	Chr2:84173232-84173251	MsG0280011450.01.T01:CDS	55.0%
	TGTGGGACAACGTGGTGGTT+TGG	-	Chr2:84172431-84172450	None:intergenic	55.0%
	TTCATGGCACAGCCAGTAGC+TGG	+	Chr2:84172262-84172281	MsG0280011450.01.T01:CDS	55.0%
	ACGCTCGGTAGCAGCAGCAA+TGG	-	Chr2:84172293-84172312	None:intergenic	60.0%
	GCAATGGCAGCTCCAGCTAC+TGG	-	Chr2:84172277-84172296	None:intergenic	60.0%
	GTGGACGGAGGAAGAAGCTC+CGG	-	Chr2:84172337-84172356	None:intergenic	60.0%
!!	GCTCTAGAGGATGTGGACGG+AGG	-	Chr2:84172349-84172368	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	84172205	84173664	84172205	ID=MsG0280011450.01;Name=MsG0280011450.01
Chr2	mRNA	84172205	84173664	84172205	ID=MsG0280011450.01.T01;Parent=MsG0280011450.01;Name=MsG0280011450.01.T01;_AED=0.47;_eAED=0.47;_QI=0\|1\|0\|1\|1\|1\|2\|0\|281
Chr2	exon	84172205	84172597	84172205	ID=MsG0280011450.01.T01:exon:12609;Parent=MsG0280011450.01.T01
Chr2	exon	84173212	84173664	84173212	ID=MsG0280011450.01.T01:exon:12610;Parent=MsG0280011450.01.T01
Chr2	CDS	84172205	84172597	84172205	ID=MsG0280011450.01.T01:cds;Parent=MsG0280011450.01.T01
Chr2	CDS	84173212	84173664	84173212	ID=MsG0280011450.01.T01:cds;Parent=MsG0280011450.01.T01

Gene Sequence

>MsG0280011450.01.T01

ATGGATGTGGAATATTTGTTAGAGATGTGCCACGAAGATGAAGACTTCCTTTGTGACTTCATGGCACAGCCAGTAGCTGGAGCTGCCATTGCTGCTGCTACCGAGCGTATTGTAGTCTCTGATGAGTCACCGGAGCTTCTTCCTCCGTCCACATCCTCTAGAGCTTGCATTATCTCTTTGGATAATTCCGCGAAGATACTGTTACCAGCTGTGATGTCCAAATCCAAACCACCACGTTGTCCCACAAAAAAGATGATGACTTCTGAGAATCGAAACATGGAACCAAAAGCAATTATTAGATCTCTAGATCACGCAATGGGAGAGAGGAAAAGGAGACTTGAACTTGCACACAAATTCATAGAGCTTTCAGCTATTATTCCTCGCTCAAACAAGACAGACAAAGCTTCTATCGTTGCTGGCGCAACCAATTACGTGGAGCAACTCCAGAAACGAGTGAAGGAGTTAGAAGTACAACAAAACAAGAGAGGTAAAGAACCAATGATACTTCTCAATAAGAAAAATTCTTGTGGAGTTTCACGTACCACATCTAGTGAAATGAATCTTGACAATTATCTTGGACCAAATGAATTGCTTCCTGATGTCAAAGTGAAAGTGTCGGAGAATAATATACTCATTTACATCAATTGTGAGAAGGAAAATGGCATTCAACACAAAATATTGGACATGCTTCAAAATCTTCATTTGTTTGTCACCAGCACTAGCACATTGCCGTTTGGCAATTCAACTCTTGGCATAACTATCATCGCCAAGGTTCGCATCACCAAATTTTCATTAACTATTGAAATGAATATGTTTTTAAGGGAAATGTTGTTGAATGAATGTTGA

Protein sequence

>MsG0280011450.01.T01

MDVEYLLEMCHEDEDFLCDFMAQPVAGAAIAAATERIVVSDESPELLPPSTSSRACIISLDNSAKILLPAVMSKSKPPRCPTKKMMTSENRNMEPKAIIRSLDHAMGERKRRLELAHKFIELSAIIPRSNKTDKASIVAGATNYVEQLQKRVKELEVQQNKRGKEPMILLNKKNSCGVSRTTSSEMNLDNYLGPNELLPDVKVKVSENNILIYINCEKENGIQHKILDMLQNLHLFVTSTSTLPFGNSTLGITIIAKVRITKFSLTIEMNMFLREMLLNEC*