AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029312.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029312.01.T01 MTR_5g084570 88.000 50 5 1 1 49 1 50 2.90e-23 92.4
MsG0580029312.01.T01 MTR_5g084540 87.719 57 6 1 1 56 1 57 8.66e-22 88.2
MsG0580029312.01.T01 MTR_5g084530 100.000 49 0 0 1 49 1 49 2.50e-18 78.2
MsG0580029312.01.T01 MTR_5g084470 97.959 49 1 0 1 49 1 49 2.91e-17 77.4
MsG0580029312.01.T01 MTR_5g084410 55.102 98 30 5 1 95 1 87 2.18e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 110 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACTACCACCTCCATATT+TGG 0.177321 5:+95159627 None:intergenic
ATTGTAACCACCACCATATT+TGG 0.258110 5:+95164325 None:intergenic
TTGAACAATGGATTCGAAAA+AGG 0.281503 5:-95164854 None:intergenic
GAAGTAAACGATGCCAAATA+TGG 0.342429 5:-95164338 MsG0580029312.01.T01:CDS
GAAGTAAATGATGCCAAATA+TGG 0.357966 5:-95159640 MsG0580029312.01.T01:CDS
GGTGGAGGTCACGGTGGTCA+TGG 0.421667 5:-95159706 MsG0580029312.01.T01:CDS
GGTGGAGGTCACGGTGGTCA+TGG 0.425233 5:-95159748 MsG0580029312.01.T01:CDS
CATGCTAGGCCTCTTGGCTA+TGG 0.442877 5:-95164824 MsG0580029312.01.T01:CDS
GGTGGTTACAATGGTGGAGG+TGG 0.449116 5:-95164179 MsG0580029312.01.T01:CDS
GGTGGTTACAATGGTGGAGG+TGG 0.449116 5:-95164257 MsG0580029312.01.T01:CDS
CACGGTGGACATGGTGGCCA+TGG 0.451717 5:-95159553 MsG0580029312.01.T01:CDS
CACGGTGGACACGGTGGACA+TGG 0.456773 5:-95159562 MsG0580029312.01.T01:CDS
GGTGGATACAATGGTGGAGG+TGG 0.457644 5:-95164140 MsG0580029312.01.T01:CDS
AATCCTCATGCTAGGCCTCT+TGG 0.463972 5:-95164830 MsG0580029312.01.T01:CDS
CACGGTGGTCATGGTGGAGG+TGG 0.469838 5:-95159739 MsG0580029312.01.T01:CDS
AACTTCCACTGATGCTAAGA+AGG 0.471659 5:-95164761 MsG0580029312.01.T01:CDS
GGCGGTTCCCACAACGGTGG+TGG 0.476507 5:-95164200 MsG0580029312.01.T01:CDS
GGAGGTGGTTACAATGGTGG+TGG 0.479043 5:-95159724 MsG0580029312.01.T01:CDS
GGTCACGGTGGTCATGGTGG+AGG 0.488013 5:-95159742 MsG0580029312.01.T01:CDS
GGCTACAACCACGGTGGAGG+TGG 0.494875 5:-95159586 MsG0580029312.01.T01:CDS
GTAACCACCACCACCGTTGT+GGG 0.499800 5:+95164193 None:intergenic
GTAACCACCACCACCGTTGT+GGG 0.499800 5:+95164232 None:intergenic
GTAACCACCACCACCGTTGT+GGG 0.499800 5:+95164271 None:intergenic
GGTGGTTACAATGGTGGTGG+AGG 0.504299 5:-95159721 MsG0580029312.01.T01:CDS
GGTGGTTCCCACAACGGTGG+TGG 0.506318 5:-95164161 MsG0580029312.01.T01:CDS
GGTGGTTCCCACAACGGTGG+TGG 0.506318 5:-95164239 MsG0580029312.01.T01:CDS
GGTGGTTCCCACAACGGTGG+TGG 0.506318 5:-95164278 MsG0580029312.01.T01:CDS
TACAATGGTGGTGGAGGTCA+CGG 0.506705 5:-95159715 MsG0580029312.01.T01:CDS
CATGGTGGCCATGGTGGTCA+CGG 0.508694 5:-95159544 MsG0580029312.01.T01:CDS
TTTCCTCAGTGATGTCCGCT+AGG 0.509380 5:-95164795 MsG0580029312.01.T01:CDS
GTATCCACCACCACCGTTGT+GGG 0.511667 5:+95164154 None:intergenic
GGTTATAACCACGGTGGAGG+TGG 0.516490 5:-95164296 MsG0580029312.01.T01:CDS
GGTTCCCACAACGGTGGTGG+TGG 0.519632 5:-95164158 MsG0580029312.01.T01:CDS
GGTGGTTACAATGGTGGAGG+CGG 0.520288 5:-95164218 MsG0580029312.01.T01:CDS
CATGGTGGAGGTGGTTACAA+TGG 0.522016 5:-95159730 MsG0580029312.01.T01:CDS
GGTTCCCACAACGGTGGTGG+TGG 0.523687 5:-95164197 MsG0580029312.01.T01:CDS
GGAGGTGGTCACGGTGGACA+CGG 0.533640 5:-95159571 MsG0580029312.01.T01:CDS
TACAATGGTGGTGGAGGTCA+CGG 0.533697 5:-95159757 MsG0580029312.01.T01:CDS
AGTGTTGTCCTCAGTTTGCA+CGG 0.535241 5:+95159519 None:intergenic
AGTAATTACAACGATGGTAG+AGG 0.535647 5:-95159610 MsG0580029312.01.T01:CDS
AACAGTTACAATGGTGGTGG+AGG 0.538112 5:-95159763 MsG0580029312.01.T01:intron
GGTTCCCACAACGGTGGTGG+TGG 0.538164 5:-95164236 MsG0580029312.01.T01:CDS
GGTTCCCACAACGGTGGTGG+TGG 0.538164 5:-95164275 MsG0580029312.01.T01:CDS
GGTAGAGGTGGCTACAACCA+CGG 0.539916 5:-95159595 MsG0580029312.01.T01:CDS
TTCCTCAGTGATGTCCGCTA+GGG 0.540952 5:-95164794 MsG0580029312.01.T01:CDS
TGTATCCACCACCACCGTTG+TGG 0.544285 5:+95164153 None:intergenic
GGAGGTTATAACCACGGTGG+AGG 0.550860 5:-95164299 MsG0580029312.01.T01:CDS
GGTTACAACAATGGTGGAGG+TGG 0.550910 5:-95164119 MsG0580029312.01.T01:CDS
TGTAACCACCACCACCGTTG+TGG 0.554711 5:+95164192 None:intergenic
TGTAACCACCACCACCGTTG+TGG 0.554711 5:+95164231 None:intergenic
TGTAACCACCACCACCGTTG+TGG 0.554711 5:+95164270 None:intergenic
TACAACAGTTACAATGGTGG+TGG 0.560693 5:-95159766 MsG0580029312.01.T01:intron
AACCACGGTGGAGGTGGTCA+CGG 0.575658 5:-95159580 MsG0580029312.01.T01:CDS
AACGGTGGTGGTGGTTACAA+TGG 0.578197 5:-95164188 MsG0580029312.01.T01:CDS
AACGGTGGTGGTGGTTACAA+TGG 0.578197 5:-95164227 MsG0580029312.01.T01:CDS
AACGGTGGTGGTGGTTACAA+TGG 0.578197 5:-95164266 MsG0580029312.01.T01:CDS
AACGATGCCAAATATGGTGG+TGG 0.582570 5:-95164332 MsG0580029312.01.T01:CDS
GGTGGTGGTTACAATGGTGG+AGG 0.583444 5:-95164221 MsG0580029312.01.T01:CDS
CTCACCCTTCTTAGCATCAG+TGG 0.584062 5:+95164756 None:intergenic
GGAGGTCACGGTGGTCATGG+TGG 0.586548 5:-95159745 MsG0580029312.01.T01:CDS
AATGATGCCAAATATGGAGG+TGG 0.589889 5:-95159634 MsG0580029312.01.T01:CDS
AACGGTGGTGGTGGATACAA+TGG 0.590390 5:-95164149 MsG0580029312.01.T01:CDS
GGTGGTGGATACAATGGTGG+AGG 0.601928 5:-95164143 MsG0580029312.01.T01:CDS
GGTGGCTACAACCACGGTGG+AGG 0.603384 5:-95159589 MsG0580029312.01.T01:CDS
GGTGGTGGTTACAATGGTGG+AGG 0.609082 5:-95164182 MsG0580029312.01.T01:CDS
GGTGGTGGTTACAATGGTGG+AGG 0.609082 5:-95164260 MsG0580029312.01.T01:CDS
GGTGGTTACAACAATGGTGG+AGG 0.611857 5:-95164122 MsG0580029312.01.T01:CDS
GGTGGAGGTGGTTACAATGG+TGG 0.613370 5:-95159727 MsG0580029312.01.T01:CDS
GGTGGTGGTTACAATGGTGG+AGG 0.619509 5:-95164317 MsG0580029312.01.T01:CDS
TATGGTGGTGGTTACAATGG+TGG 0.621083 5:-95164320 MsG0580029312.01.T01:CDS
GGTGGAGGTGGTTCCCACAA+CGG 0.621482 5:-95164284 MsG0580029312.01.T01:CDS
GGTGGAGGCGGTTCCCACAA+CGG 0.629170 5:-95164206 MsG0580029312.01.T01:CDS
ACTTCCACTGATGCTAAGAA+GGG 0.629929 5:-95164760 MsG0580029312.01.T01:intron
GGTGGAGGTGGTTCCCACAA+CGG 0.630975 5:-95164167 MsG0580029312.01.T01:CDS
GGTGGAGGTGGTTCCCACAA+CGG 0.630975 5:-95164245 MsG0580029312.01.T01:CDS
ATCTGTTGCCGTGCAAACTG+AGG 0.633170 5:-95159674 MsG0580029312.01.T01:CDS
GGTGGACATGGTGGCCATGG+TGG 0.633718 5:-95159550 MsG0580029312.01.T01:CDS
GGAGGCGGTTCCCACAACGG+TGG 0.636831 5:-95164203 MsG0580029312.01.T01:CDS
GGAGGTGGTTCCCACAACGG+TGG 0.639901 5:-95164281 MsG0580029312.01.T01:CDS
GGAGGTCACGGTGGTCATGG+CGG 0.640286 5:-95159703 MsG0580029312.01.T01:CDS
TAGCCAAGAGGCCTAGCATG+AGG 0.641377 5:+95164827 None:intergenic
GGAGGTGGTTCCCACAACGG+TGG 0.642570 5:-95164164 MsG0580029312.01.T01:CDS
GGAGGTGGTTCCCACAACGG+TGG 0.642570 5:-95164242 MsG0580029312.01.T01:CDS
AAATATGGTGGTGGTTACAA+TGG 0.651048 5:-95164323 MsG0580029312.01.T01:CDS
GCACGGCACCGTGACCACCA+TGG 0.651087 5:+95159536 None:intergenic
AATTACAACGATGGTAGAGG+TGG 0.652701 5:-95159607 MsG0580029312.01.T01:CDS
TCACGGTGCCGTGCAAACTG+AGG 0.653858 5:-95159527 MsG0580029312.01.T01:CDS
GGTGGACACGGTGGACATGG+TGG 0.654274 5:-95159559 MsG0580029312.01.T01:CDS
CACGGTGGAGGTGGTCACGG+TGG 0.660681 5:-95159577 MsG0580029312.01.T01:CDS
AATTACAACAGTTACAATGG+TGG 0.663011 5:-95159769 MsG0580029312.01.T01:intron
GGTGGTCACGGTGGACACGG+TGG 0.663754 5:-95159568 MsG0580029312.01.T01:CDS
GGTGGAGGTGGTTACAACAA+TGG 0.666787 5:-95164128 MsG0580029312.01.T01:CDS
GGTGGTGGTGGTTACAATGG+TGG 0.671495 5:-95164185 MsG0580029312.01.T01:CDS
GGTGGTGGTGGTTACAATGG+TGG 0.671495 5:-95164224 MsG0580029312.01.T01:CDS
GGTGGTGGTGGTTACAATGG+TGG 0.671495 5:-95164263 MsG0580029312.01.T01:CDS
GGTGGTAGTAATTACAACGA+TGG 0.680382 5:-95159616 MsG0580029312.01.T01:CDS
GGAGGTGGTTACAACAATGG+TGG 0.681941 5:-95164125 MsG0580029312.01.T01:CDS
CACCGTGACCACCTCCACCG+TGG 0.688584 5:+95159578 None:intergenic
GGTGGTGGTGGATACAATGG+TGG 0.695355 5:-95164146 MsG0580029312.01.T01:CDS
GTAAATGATGCCAAATATGG+AGG 0.695370 5:-95159637 MsG0580029312.01.T01:CDS
AAATAAGAGCCATAGCCAAG+AGG 0.700367 5:+95164815 None:intergenic
AATGGTGGTGGAGGTCACGG+TGG 0.715780 5:-95159712 MsG0580029312.01.T01:CDS
AATGGTGGTGGAGGTCACGG+TGG 0.715780 5:-95159754 MsG0580029312.01.T01:CDS
AATGGTGGAGGTTATAACCA+CGG 0.716087 5:-95164305 MsG0580029312.01.T01:CDS
TGTGGGAACCACCTCCACCG+TGG 0.717584 5:+95164288 None:intergenic
AGTTTCAGTTAAGTCCCTAG+CGG 0.722649 5:+95164780 None:intergenic
GTCCCTAGCGGACATCACTG+AGG 0.722830 5:+95164792 None:intergenic
GTAAACGATGCCAAATATGG+TGG 0.739461 5:-95164335 MsG0580029312.01.T01:CDS
GGTGGAGGTTATAACCACGG+TGG 0.774475 5:-95164302 MsG0580029312.01.T01:CDS
AGAGGTGGCTACAACCACGG+TGG 0.781749 5:-95159592 MsG0580029312.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAATAATATAAAATTGAT+GGG + Chr5:95161444-95161463 None:intergenic 10.0%
!!! AATTAAACTTTGAAATAATT+TGG + Chr5:95162341-95162360 None:intergenic 10.0%
!!! ATTGTATTATTTTAATACAA+TGG - Chr5:95162122-95162141 MsG0580029312.01.T01:intron 10.0%
!!! TTTGTATTATTTTAATACAA+AGG - Chr5:95161872-95161891 MsG0580029312.01.T01:intron 10.0%
!! AATCAATTTATATAACATTG+AGG + Chr5:95159821-95159840 None:intergenic 15.0%
!! ACATCAAATTATTAAATGTA+TGG + Chr5:95163727-95163746 None:intergenic 15.0%
!! CAAACAATCATTATTATTAA+GGG + Chr5:95160964-95160983 None:intergenic 15.0%
!! CATAATAATATAAACCTATA+TGG - Chr5:95163574-95163593 MsG0580029312.01.T01:intron 15.0%
!! CATATAGGTTTATATTATTA+TGG + Chr5:95163576-95163595 None:intergenic 15.0%
!! GCTAAATAATATAAAATTGA+TGG + Chr5:95161445-95161464 None:intergenic 15.0%
!! TTATATTATTATGGAATTCT+TGG + Chr5:95163567-95163586 None:intergenic 15.0%
!!! ACTACTTTTATAATTTAAAG+GGG - Chr5:95163188-95163207 MsG0580029312.01.T01:intron 15.0%
!!! CACTACTTTTATAATTTAAA+GGG - Chr5:95163187-95163206 MsG0580029312.01.T01:intron 15.0%
!!! TTTAAACTTTTGAAATATGT+GGG + Chr5:95161039-95161058 None:intergenic 15.0%
!!! TTTTAAACTTTTGAAATATG+TGG + Chr5:95161040-95161059 None:intergenic 15.0%
!! AAAAATTACAACAGTTACAA+TGG - Chr5:95164585-95164604 MsG0580029312.01.T01:intron 20.0%
!! ACTTATAGATTTATTCTCAT+TGG - Chr5:95161829-95161848 MsG0580029312.01.T01:intron 20.0%
!! AGTGAAAATATATATTTGTG+TGG + Chr5:95162092-95162111 None:intergenic 20.0%
!! ATTAGAAACTCTTTGTTAAA+TGG + Chr5:95163232-95163251 None:intergenic 20.0%
!! ATTTGGTCAAATAAACATTA+AGG - Chr5:95160927-95160946 MsG0580029312.01.T01:intron 20.0%
!! CAAGTCTATAATAATAAACT+TGG - Chr5:95161724-95161743 MsG0580029312.01.T01:intron 20.0%
!! CCTTTAAATTATAAAAGTAG+TGG + Chr5:95163189-95163208 None:intergenic 20.0%
!! CTTATTGTATTTAGACTATT+TGG + Chr5:95162506-95162525 None:intergenic 20.0%
!! GATTCCTAATTATAAACTTT+GGG + Chr5:95163423-95163442 None:intergenic 20.0%
!! GCAAACAATCATTATTATTA+AGG + Chr5:95160965-95160984 None:intergenic 20.0%
!! TGAGATTCATCTTAAATTAT+TGG + Chr5:95162166-95162185 None:intergenic 20.0%
!! TGATTCCTAATTATAAACTT+TGG + Chr5:95163424-95163443 None:intergenic 20.0%
!! TTATCAAAATATACTTCATC+AGG - Chr5:95161938-95161957 MsG0580029312.01.T01:intron 20.0%
!! TTTACTGAATTTAAACAAGT+CGG - Chr5:95161760-95161779 MsG0580029312.01.T01:intron 20.0%
!!! AAATTATTGGTGATATATTG+TGG + Chr5:95162153-95162172 None:intergenic 20.0%
!!! AACTTTGAAATAATTTGGTT+AGG + Chr5:95162336-95162355 None:intergenic 20.0%
!!! ATGTTAAAAAAAAGTTTTCC+TGG - Chr5:95161065-95161084 MsG0580029312.01.T01:intron 20.0%
!!! ATGTTTATTTTTGTACCTTT+TGG + Chr5:95163081-95163100 None:intergenic 20.0%
!!! ATTATTTTACAACAATCTTG+AGG + Chr5:95163825-95163844 None:intergenic 20.0%
!!! CCACTACTTTTATAATTTAA+AGG - Chr5:95163186-95163205 MsG0580029312.01.T01:intron 20.0%
!!! GTTTTTTTCTACTTATTTGA+AGG - Chr5:95159709-95159728 MsG0580029312.01.T01:CDS 20.0%
!!! TGTAAATTTTGTGAAATTTC+TGG + Chr5:95162724-95162743 None:intergenic 20.0%
!!! TGTTAAAAAAAAGTTTTCCT+GGG - Chr5:95161066-95161085 MsG0580029312.01.T01:intron 20.0%
!!! TTAAACTTTTGAAATATGTG+GGG + Chr5:95161038-95161057 None:intergenic 20.0%
! ATAAAAATAGGGATACTAGT+AGG - Chr5:95160809-95160828 MsG0580029312.01.T01:intron 25.0%
! ATGTGAACAAATATTAAACG+TGG - Chr5:95160890-95160909 MsG0580029312.01.T01:intron 25.0%
! ATTATAACAACTTCATGAGA+GGG - Chr5:95162803-95162822 MsG0580029312.01.T01:intron 25.0%
! ATTTATATTTCCTCAATGTG+GGG + Chr5:95161993-95162012 None:intergenic 25.0%
! ATTTGCTTCATAACATACAA+AGG - Chr5:95159845-95159864 MsG0580029312.01.T01:intron 25.0%
! CAAAATACACACATGTTTAA+CGG - Chr5:95162216-95162235 MsG0580029312.01.T01:intron 25.0%
! CATCCAAATATTGAGTTTAT+GGG + Chr5:95160592-95160611 None:intergenic 25.0%
! CTAGTCATAGCATAAAAATA+GGG - Chr5:95160798-95160817 MsG0580029312.01.T01:intron 25.0%
! GATTTATATTTCCTCAATGT+GGG + Chr5:95161994-95162013 None:intergenic 25.0%
! GTCAATATTTGTGAATTTAG+CGG + Chr5:95161669-95161688 None:intergenic 25.0%
! TAAATTAGAGAACAAGTGAA+AGG - Chr5:95160326-95160345 MsG0580029312.01.T01:intron 25.0%
! TAACCCATAAACTCAATATT+TGG - Chr5:95160586-95160605 MsG0580029312.01.T01:intron 25.0%
! TATAGACTTGATGAAATAAG+AGG + Chr5:95161714-95161733 None:intergenic 25.0%
! TATTATACGTTGCAGAAAAA+TGG - Chr5:95163319-95163338 MsG0580029312.01.T01:intron 25.0%
! TATTTATATTCTGCACTAAC+CGG + Chr5:95162270-95162289 None:intergenic 25.0%
! TCAAATATATCTCAGATATC+AGG - Chr5:95160558-95160577 MsG0580029312.01.T01:intron 25.0%
! TCATCCAAATATTGAGTTTA+TGG + Chr5:95160593-95160612 None:intergenic 25.0%
! TGATTTATATTTCCTCAATG+TGG + Chr5:95161995-95162014 None:intergenic 25.0%
! TTCTTAACCTACTTTGTATA+AGG - Chr5:95162595-95162614 MsG0580029312.01.T01:intron 25.0%
! TTGTTGTCAGTTAAATATTG+CGG + Chr5:95163675-95163694 None:intergenic 25.0%
! TTTCCTATAGAGTATGATAA+TGG + Chr5:95161477-95161496 None:intergenic 25.0%
!! TAGTTTTCCTTATACAAAGT+AGG + Chr5:95162605-95162624 None:intergenic 25.0%
!! TCATATTCTTTTGACCATTT+TGG + Chr5:95163450-95163469 None:intergenic 25.0%
!! TTAAACATGTGTGTATTTTG+CGG + Chr5:95162216-95162235 None:intergenic 25.0%
!! TTATGACAGCTCTTTTTAAA+AGG + Chr5:95163124-95163143 None:intergenic 25.0%
!!! ATTTAAAGGGGTATTTCTTT+AGG - Chr5:95163200-95163219 MsG0580029312.01.T01:intron 25.0%
!!! CTTTTGGCTTTTAAAAATGA+GGG + Chr5:95163065-95163084 None:intergenic 25.0%
!!! TAAACTTTTGAAATATGTGG+GGG + Chr5:95161037-95161056 None:intergenic 25.0%
!!! TTGATTTGTGAACATTTTGA+TGG + Chr5:95160382-95160401 None:intergenic 25.0%
!!! TTTTTTGAATGTGCATGTTT+TGG + Chr5:95163007-95163026 None:intergenic 25.0%
AAATAATTTGGTTAGGCACT+TGG + Chr5:95162329-95162348 None:intergenic 30.0%
AAGCTCAAGAAAAATTAGCA+TGG - Chr5:95162838-95162857 MsG0580029312.01.T01:intron 30.0%
AATTACAACAGTTACAATGG+TGG - Chr5:95164588-95164607 MsG0580029312.01.T01:intron 30.0%
ACCAAAGCAACATATATACA+AGG - Chr5:95160717-95160736 MsG0580029312.01.T01:intron 30.0%
ATAAGGAAAACTACACAGAA+AGG - Chr5:95162612-95162631 MsG0580029312.01.T01:intron 30.0%
ATACTCCACGTTTATTATAG+TGG + Chr5:95160759-95160778 None:intergenic 30.0%
ATATGTGTGTATGCTATCTA+CGG - Chr5:95160656-95160675 MsG0580029312.01.T01:intron 30.0%
ATGTTTATTTGACCAAATCC+TGG + Chr5:95160925-95160944 None:intergenic 30.0%
ATTAGGAATCAACACCAAAA+TGG - Chr5:95163433-95163452 MsG0580029312.01.T01:intron 30.0%
CAGGATGAATAATGAATTTG+TGG + Chr5:95162432-95162451 None:intergenic 30.0%
CATATATATTGTGTTTGCAG+AGG - Chr5:95159979-95159998 MsG0580029312.01.T01:intron 30.0%
CATCCATTATCATACTCTAT+AGG - Chr5:95161471-95161490 MsG0580029312.01.T01:intron 30.0%
CATTATAACAACTTCATGAG+AGG - Chr5:95162802-95162821 MsG0580029312.01.T01:intron 30.0%
CCTAGTCATAGCATAAAAAT+AGG - Chr5:95160797-95160816 MsG0580029312.01.T01:intron 30.0%
CTATATAGTTGTAACATGCA+TGG - Chr5:95162406-95162425 MsG0580029312.01.T01:intron 30.0%
GAAGTAAATGATGCCAAATA+TGG - Chr5:95164717-95164736 MsG0580029312.01.T01:intron 30.0%
TGAAAGGAACTTATCGAATT+TGG - Chr5:95160342-95160361 MsG0580029312.01.T01:intron 30.0%
TGCTCCCAAAGTTTATAATT+AGG - Chr5:95163416-95163435 MsG0580029312.01.T01:intron 30.0%
TGTTTGTAACTATCTTCTCT+TGG + Chr5:95162892-95162911 None:intergenic 30.0%
TTTATATTTCCTCAATGTGG+GGG + Chr5:95161992-95162011 None:intergenic 30.0%
TTTATTATCCTTGTCTGAGA+TGG + Chr5:95162675-95162694 None:intergenic 30.0%
TTTCGATTACTTAGCCATAT+AGG + Chr5:95163591-95163610 None:intergenic 30.0%
! CATACTCTAGTTCAACATAT+TGG - Chr5:95162480-95162499 MsG0580029312.01.T01:intron 30.0%
! GATTCGAGTATATGTGATTT+TGG + Chr5:95162530-95162549 None:intergenic 30.0%
!! CCTCATTTTTAAAAGCCAAA+AGG - Chr5:95163063-95163082 MsG0580029312.01.T01:intron 30.0%
!!! CCTATTTTTATGCTATGACT+AGG + Chr5:95160800-95160819 None:intergenic 30.0%
!!! CCTTTTGGCTTTTAAAAATG+AGG + Chr5:95163066-95163085 None:intergenic 30.0%
AAAACATTACCACTGCTAGT+TGG + Chr5:95163640-95163659 None:intergenic 35.0%
AAACCCTTGGGAAGAAATTT+AGG + Chr5:95161635-95161654 None:intergenic 35.0%
AACCCTTGGGAAGAAATTTA+GGG + Chr5:95161634-95161653 None:intergenic 35.0%
ACATCGTAGATGTAATGCAT+CGG - Chr5:95161092-95161111 MsG0580029312.01.T01:intron 35.0%
ACTCGAATACGACAAGTAAT+GGG + Chr5:95161596-95161615 None:intergenic 35.0%
ACTTAATGAGCACGTTTAAG+AGG - Chr5:95160835-95160854 MsG0580029312.01.T01:intron 35.0%
AGACTTAACACACAGTGAAT+TGG - Chr5:95161154-95161173 MsG0580029312.01.T01:intron 35.0%
AGTAATTACAACGATGGTAG+AGG - Chr5:95164747-95164766 MsG0580029312.01.T01:intron 35.0%
ATGATTACCATAAGCCCTTA+TGG + Chr5:95161402-95161421 None:intergenic 35.0%
ATTACTACCACCTCCATATT+TGG + Chr5:95164733-95164752 None:intergenic 35.0%
ATTGTAACCACCACCATATT+TGG + Chr5:95160035-95160054 None:intergenic 35.0%
GAAGTAAACGATGCCAAATA+TGG - Chr5:95160019-95160038 MsG0580029312.01.T01:intron 35.0%
GATCCGTATATAAAACCCTT+GGG + Chr5:95161647-95161666 None:intergenic 35.0%
GTAAATGATGCCAAATATGG+AGG - Chr5:95164720-95164739 MsG0580029312.01.T01:intron 35.0%
GTGGTTCCTAAAAATAAGCA+AGG - Chr5:95160866-95160885 MsG0580029312.01.T01:intron 35.0%
TAACTGACAACAAACTTCCT+AGG - Chr5:95163682-95163701 MsG0580029312.01.T01:intron 35.0%
TACACATACACATGTCATTG+AGG - Chr5:95162740-95162759 MsG0580029312.01.T01:intron 35.0%
TAGCATACAACAAGTGTCTT+GGG + Chr5:95161197-95161216 None:intergenic 35.0%
TGATTACCATAAGCCCTTAT+GGG + Chr5:95161401-95161420 None:intergenic 35.0%
TTACTGCATCACTCAAATAC+CGG - Chr5:95162248-95162267 MsG0580029312.01.T01:intron 35.0%
TTCCCTAAATTTCTTCCCAA+GGG - Chr5:95161629-95161648 MsG0580029312.01.T01:intron 35.0%
TTTCCCTAAATTTCTTCCCA+AGG - Chr5:95161628-95161647 MsG0580029312.01.T01:intron 35.0%
! ATTTAAACAAGTCGGCTTAG+TGG - Chr5:95161768-95161787 MsG0580029312.01.T01:intron 35.0%
! CCACGTTTATTATAGTGGAA+CGG + Chr5:95160754-95160773 None:intergenic 35.0%
! GCCTTGTATATATGTTGCTT+TGG + Chr5:95160721-95160740 None:intergenic 35.0%
! GTGTTAAGTCTCATTAGTCT+AGG + Chr5:95161145-95161164 None:intergenic 35.0%
! TAAGTCTCATTAGTCTAGGA+CGG + Chr5:95161141-95161160 None:intergenic 35.0%
! TGAATTGGTTTAGCAAGCTA+TGG - Chr5:95161169-95161188 MsG0580029312.01.T01:intron 35.0%
! TTCTTGGTCTCTTGTTATAC+TGG + Chr5:95163551-95163570 None:intergenic 35.0%
!! AAATATGGTGGTGGTTACAA+TGG - Chr5:95160034-95160053 MsG0580029312.01.T01:intron 35.0%
!! ATTTATTTTCCCCAATGTGG+GGG + Chr5:95162069-95162088 None:intergenic 35.0%
!! CACATGCCTTGCTTATTTTT+AGG + Chr5:95160875-95160894 None:intergenic 35.0%
!! CTTCCCAAGGGTTTTATATA+CGG - Chr5:95161641-95161660 MsG0580029312.01.T01:intron 35.0%
!! GATTTATTTTCCCCAATGTG+GGG + Chr5:95162070-95162089 None:intergenic 35.0%
!! GGATTTATTTTCCCCAATGT+GGG + Chr5:95162071-95162090 None:intergenic 35.0%
!! TGGATTTATTTTCCCCAATG+TGG + Chr5:95162072-95162091 None:intergenic 35.0%
!!! TTAACAGTGTGTTGTTTTGC+AGG + Chr5:95160416-95160435 None:intergenic 35.0%
AAAAAGGCAATCCTCATGCT+AGG - Chr5:95159519-95159538 MsG0580029312.01.T01:CDS 40.0%
AAATAAGAGCCATAGCCAAG+AGG + Chr5:95159545-95159564 None:intergenic 40.0%
AACTTCCACTGATGCTAAGA+AGG - Chr5:95159596-95159615 MsG0580029312.01.T01:CDS 40.0%
AATGAGCACGTTTAAGAGGA+AGG - Chr5:95160839-95160858 MsG0580029312.01.T01:intron 40.0%
AATGATGCCAAATATGGAGG+TGG - Chr5:95164723-95164742 MsG0580029312.01.T01:intron 40.0%
AATGTATGGTGTGAGACCTT+CGG + Chr5:95163713-95163732 None:intergenic 40.0%
AATTACAACGATGGTAGAGG+TGG - Chr5:95164750-95164769 MsG0580029312.01.T01:intron 40.0%
ACACACTGTTAAGTAACCTG+AGG - Chr5:95160424-95160443 MsG0580029312.01.T01:intron 40.0%
ACATACACATGTCATTGAGG+TGG - Chr5:95162743-95162762 MsG0580029312.01.T01:intron 40.0%
ACCCATTGAACCTTCTTCAT+GGG - Chr5:95161546-95161565 MsG0580029312.01.T01:intron 40.0%
ACCTATATGAGTGTCAAGTG+GGG + Chr5:95161344-95161363 None:intergenic 40.0%
ACTTCCACTGATGCTAAGAA+GGG - Chr5:95159597-95159616 MsG0580029312.01.T01:CDS 40.0%
AGTTTCAGTTAAGTCCCTAG+CGG + Chr5:95159580-95159599 None:intergenic 40.0%
ATCCCATGAAGAAGGTTCAA+TGG + Chr5:95161551-95161570 None:intergenic 40.0%
CACCTATATGAGTGTCAAGT+GGG + Chr5:95161345-95161364 None:intergenic 40.0%
CACTCGAATACGACAAGTAA+TGG + Chr5:95161597-95161616 None:intergenic 40.0%
CATTACTTGTCGTATTCGAG+TGG - Chr5:95161595-95161614 MsG0580029312.01.T01:intron 40.0%
CCGTTCCACTATAATAAACG+TGG - Chr5:95160751-95160770 MsG0580029312.01.T01:intron 40.0%
CCTCCGCTTATGATTCATAA+CGG + Chr5:95160526-95160545 None:intergenic 40.0%
CGCTGGCACAATAAACAAAA+CGG - Chr5:95163286-95163305 MsG0580029312.01.T01:intron 40.0%
CGTGTAACAGCAAGAATTGT+GGG + Chr5:95161244-95161263 None:intergenic 40.0%
CTAGCATACAACAAGTGTCT+TGG + Chr5:95161198-95161217 None:intergenic 40.0%
CTCCGCTTATGATTCATAAC+GGG + Chr5:95160525-95160544 None:intergenic 40.0%
GATCTCCAATCACAAAGGTT+GGG - Chr5:95161568-95161587 MsG0580029312.01.T01:intron 40.0%
GCTTTGATCAAAACCTATCG+TGG - Chr5:95163747-95163766 MsG0580029312.01.T01:intron 40.0%
GGATCCGTATATAAAACCCT+TGG + Chr5:95161648-95161667 None:intergenic 40.0%
GGTGGTAGTAATTACAACGA+TGG - Chr5:95164741-95164760 MsG0580029312.01.T01:intron 40.0%
GTAAACGATGCCAAATATGG+TGG - Chr5:95160022-95160041 MsG0580029312.01.T01:intron 40.0%
GTAGATGTAATGCATCGGAA+CGG - Chr5:95161097-95161116 MsG0580029312.01.T01:intron 40.0%
GTGTAACAGCAAGAATTGTG+GGG + Chr5:95161243-95161262 None:intergenic 40.0%
TAAACGTGGATGTAAAAGCC+AGG - Chr5:95160904-95160923 MsG0580029312.01.T01:intron 40.0%
TAATTTGGTTAGGCACTTGG+TGG + Chr5:95162326-95162345 None:intergenic 40.0%
TACAACAGTTACAATGGTGG+TGG - Chr5:95164591-95164610 MsG0580029312.01.T01:intron 40.0%
TACATCTACGATGTTTACCC+AGG + Chr5:95161086-95161105 None:intergenic 40.0%
TACCCATTGAACCTTCTTCA+TGG - Chr5:95161545-95161564 MsG0580029312.01.T01:intron 40.0%
TCACCTATATGAGTGTCAAG+TGG + Chr5:95161346-95161365 None:intergenic 40.0%
TCCCATGAAGAAGGTTCAAT+GGG + Chr5:95161550-95161569 None:intergenic 40.0%
TCCCCGTTATGAATCATAAG+CGG - Chr5:95160520-95160539 MsG0580029312.01.T01:intron 40.0%
TCCGCTTATGATTCATAACG+GGG + Chr5:95160524-95160543 None:intergenic 40.0%
TGGATGTAAAAGCCAGGATT+TGG - Chr5:95160910-95160929 MsG0580029312.01.T01:intron 40.0%
TGGTTGTAGCATACACTAGA+TGG + Chr5:95161371-95161390 None:intergenic 40.0%
TGTAACAGCAAGAATTGTGG+GGG + Chr5:95161242-95161261 None:intergenic 40.0%
TTGATCAAAACCTATCGTGG+TGG - Chr5:95163750-95163769 MsG0580029312.01.T01:intron 40.0%
TTGGAACCAAGGAAAAGTTC+AGG + Chr5:95163621-95163640 None:intergenic 40.0%
TTTCACATCCATCTCAGACA+AGG - Chr5:95162664-95162683 MsG0580029312.01.T01:intron 40.0%
! AAGTCTCATTAGTCTAGGAC+GGG + Chr5:95161140-95161159 None:intergenic 40.0%
! AATGGTGGAGGTTATAACCA+CGG - Chr5:95160052-95160071 MsG0580029312.01.T01:intron 40.0%
! AGTCTTTTCCTCAGTTTGCA+CGG + Chr5:95164694-95164713 None:intergenic 40.0%
! ATGTCACCTGAACTTTTCCT+TGG - Chr5:95163612-95163631 MsG0580029312.01.T01:intron 40.0%
!! AGACACTTGTTGTATGCTAG+AGG - Chr5:95161198-95161217 MsG0580029312.01.T01:intron 40.0%
!! CCACAATTCTTGCTGTTACA+CGG - Chr5:95161242-95161261 MsG0580029312.01.T01:intron 40.0%
AACGATGCCAAATATGGTGG+TGG - Chr5:95160025-95160044 MsG0580029312.01.T01:intron 45.0%
AAGAACTGTTGTATCCTGGG+AGG + Chr5:95160501-95160520 None:intergenic 45.0%
ACAACCATACACCACCCATA+AGG - Chr5:95161384-95161403 MsG0580029312.01.T01:intron 45.0%
ACCCCACTTGACACTCATAT+AGG - Chr5:95161340-95161359 MsG0580029312.01.T01:intron 45.0%
AGTGTTGTCCTCAGTTTGCA+CGG + Chr5:95164841-95164860 None:intergenic 45.0%
ATCAAAACCTATCGTGGTGG+TGG - Chr5:95163753-95163772 MsG0580029312.01.T01:intron 45.0%
ATGTATGGTGTGAGACCTTC+GGG + Chr5:95163712-95163731 None:intergenic 45.0%
CAACCATACACCACCCATAA+GGG - Chr5:95161385-95161404 MsG0580029312.01.T01:intron 45.0%
CATGGGATCTCCAATCACAA+AGG - Chr5:95161563-95161582 MsG0580029312.01.T01:intron 45.0%
CCGTGTAACAGCAAGAATTG+TGG + Chr5:95161245-95161264 None:intergenic 45.0%
CCGTTATGAATCATAAGCGG+AGG - Chr5:95160523-95160542 MsG0580029312.01.T01:intron 45.0%
CGTTTAAGAGGAAGGTTGAG+TGG - Chr5:95160847-95160866 MsG0580029312.01.T01:intron 45.0%
CTGGGAGAATATGCGCTTAT+GGG + Chr5:95164052-95164071 None:intergenic 45.0%
GATTGGAGATCCCATGAAGA+AGG + Chr5:95161559-95161578 None:intergenic 45.0%
GGATCTCCAATCACAAAGGT+TGG - Chr5:95161567-95161586 MsG0580029312.01.T01:intron 45.0%
GGGAAGAACTGTTGTATCCT+GGG + Chr5:95160504-95160523 None:intergenic 45.0%
TACATACAAGATGCAGACGC+TGG - Chr5:95163269-95163288 MsG0580029312.01.T01:intron 45.0%
TCCTCTACGTATTGTGCATC+AGG + Chr5:95162451-95162470 None:intergenic 45.0%
TCCTGATGCACAATACGTAG+AGG - Chr5:95162447-95162466 MsG0580029312.01.T01:intron 45.0%
TGACATAGTCACTGTCCTTG+AGG - Chr5:95160449-95160468 MsG0580029312.01.T01:intron 45.0%
TGAGGCGGATAAAATCCTCA+AGG + Chr5:95160467-95160486 None:intergenic 45.0%
TGGGAGAATATGCGCTTATG+GGG + Chr5:95164051-95164070 None:intergenic 45.0%
TTACCATAAGCCCTTATGGG+TGG + Chr5:95161398-95161417 None:intergenic 45.0%
! CTAGAGCACTCATGAATACC+AGG + Chr5:95161294-95161313 None:intergenic 45.0%
!! AACAGTTACAATGGTGGTGG+AGG - Chr5:95164594-95164613 MsG0580029312.01.T01:intron 45.0%
!! TATGGTGGTGGTTACAATGG+TGG - Chr5:95160037-95160056 MsG0580029312.01.T01:intron 45.0%
AAGCCCTTATGGGTGGTGTA+TGG + Chr5:95161391-95161410 None:intergenic 50.0%
AATCCTCATGCTAGGCCTCT+TGG - Chr5:95159527-95159546 MsG0580029312.01.T01:CDS 50.0%
ACACCACCCATAAGGGCTTA+TGG - Chr5:95161392-95161411 MsG0580029312.01.T01:intron 50.0%
ACCACTGCTAGTTGGAACCA+AGG + Chr5:95163632-95163651 None:intergenic 50.0%
ATCTGTTGCCGTGCAAACTG+AGG - Chr5:95164683-95164702 MsG0580029312.01.T01:intron 50.0%
CCATAAGCGCATATTCTCCC+AGG - Chr5:95164050-95164069 MsG0580029312.01.T01:intron 50.0%
CCTGGGAGAATATGCGCTTA+TGG + Chr5:95164053-95164072 None:intergenic 50.0%
CTCACCCTTCTTAGCATCAG+TGG + Chr5:95159604-95159623 None:intergenic 50.0%
GAGAATATGCGCTTATGGGG+CGG + Chr5:95164048-95164067 None:intergenic 50.0%
GAGGATATGCGCTTATGAGG+CGG + Chr5:95160482-95160501 None:intergenic 50.0%
GGAGGTGGTTACAACAATGG+TGG - Chr5:95160232-95160251 MsG0580029312.01.T01:intron 50.0%
GGGAACCCAACCTTTGTGAT+TGG + Chr5:95161576-95161595 None:intergenic 50.0%
GGGGAAGAACTGTTGTATCC+TGG + Chr5:95160505-95160524 None:intergenic 50.0%
GGTGGAGGTGGTTACAACAA+TGG - Chr5:95160229-95160248 MsG0580029312.01.T01:intron 50.0%
GGTGGTTACAACAATGGTGG+AGG - Chr5:95160235-95160254 MsG0580029312.01.T01:intron 50.0%
TCATAAGCGCATATCCTCCC+AGG - Chr5:95160484-95160503 MsG0580029312.01.T01:intron 50.0%
TCCTTGGTTCCAACTAGCAG+TGG - Chr5:95163628-95163647 MsG0580029312.01.T01:intron 50.0%
TGGGAGGATATGCGCTTATG+AGG + Chr5:95160485-95160504 None:intergenic 50.0%
TGGGGCGGATAAAATCCTCA+AGG + Chr5:95164033-95164052 None:intergenic 50.0%
TTACACGGTTGTGCGCGAAT+AGG - Chr5:95161257-95161276 MsG0580029312.01.T01:intron 50.0%
TTCCTCAGTGATGTCCGCTA+GGG - Chr5:95159563-95159582 MsG0580029312.01.T01:CDS 50.0%
TTTCCTCAGTGATGTCCGCT+AGG - Chr5:95159562-95159581 MsG0580029312.01.T01:CDS 50.0%
! CATGGTGGAGGTGGTTACAA+TGG - Chr5:95164627-95164646 MsG0580029312.01.T01:intron 50.0%
! GGTTACAACAATGGTGGAGG+TGG - Chr5:95160238-95160257 MsG0580029312.01.T01:intron 50.0%
!! AACGGTGGTGGTGGATACAA+TGG - Chr5:95160208-95160227 MsG0580029312.01.T01:intron 50.0%
!! AACGGTGGTGGTGGTTACAA+TGG - Chr5:95160091-95160110 MsG0580029312.01.T01:intron 50.0%
!! GGTGGTGGATCTGCGAATTA+GGG - Chr5:95163768-95163787 MsG0580029312.01.T01:intron 50.0%
!! TACAATGGTGGTGGAGGTCA+CGG - Chr5:95164600-95164619 MsG0580029312.01.T01:intron 50.0%
!! TGGTGGTGGATCTGCGAATT+AGG - Chr5:95163767-95163786 MsG0580029312.01.T01:intron 50.0%
AACTTCCTAGGCACACCCGA+AGG - Chr5:95163694-95163713 MsG0580029312.01.T01:intron 55.0%
AAGTGACGACACCCCCACAT+TGG - Chr5:95162055-95162074 MsG0580029312.01.T01:intron 55.0%
AGCGACAAACCCCCACATTG+AGG - Chr5:95161980-95161999 MsG0580029312.01.T01:intron 55.0%
AGTGACGACACCCCCACATT+GGG - Chr5:95162056-95162075 MsG0580029312.01.T01:intron 55.0%
ATGAATACCAGGCACGCGCA+CGG + Chr5:95161283-95161302 None:intergenic 55.0%
CAGTGACTATGTCACGCCTC+AGG + Chr5:95160443-95160462 None:intergenic 55.0%
CATGCTAGGCCTCTTGGCTA+TGG - Chr5:95159533-95159552 MsG0580029312.01.T01:CDS 55.0%
CGGAACGGTGTAGCAAGCTA+TGG - Chr5:95161112-95161131 MsG0580029312.01.T01:intron 55.0%
GGAGGTGGTTACAATGGTGG+TGG - Chr5:95164633-95164652 MsG0580029312.01.T01:intron 55.0%
GGAGGTTATAACCACGGTGG+AGG - Chr5:95160058-95160077 MsG0580029312.01.T01:intron 55.0%
GGTAGAGGTGGCTACAACCA+CGG - Chr5:95164762-95164781 MsG0580029312.01.T01:CDS 55.0%
GGTGGAGGTGGTTACAATGG+TGG - Chr5:95164630-95164649 MsG0580029312.01.T01:intron 55.0%
GGTGGAGGTTATAACCACGG+TGG - Chr5:95160055-95160074 MsG0580029312.01.T01:intron 55.0%
GGTTATAACCACGGTGGAGG+TGG - Chr5:95160061-95160080 MsG0580029312.01.T01:intron 55.0%
GTAACCACCACCACCGTTGT+GGG + Chr5:95160089-95160108 None:intergenic 55.0%
GTATCCACCACCACCGTTGT+GGG + Chr5:95160206-95160225 None:intergenic 55.0%
TAGCCAAGAGGCCTAGCATG+AGG + Chr5:95159533-95159552 None:intergenic 55.0%
TGTAACCACCACCACCGTTG+TGG + Chr5:95160090-95160109 None:intergenic 55.0%
TGTATCCACCACCACCGTTG+TGG + Chr5:95160207-95160226 None:intergenic 55.0%
! GGTGGATACAATGGTGGAGG+TGG - Chr5:95160217-95160236 MsG0580029312.01.T01:intron 55.0%
! GGTGGTGGTTACAATGGTGG+AGG - Chr5:95160040-95160059 MsG0580029312.01.T01:intron 55.0%
! GGTGGTTACAATGGTGGAGG+CGG - Chr5:95160043-95160062 MsG0580029312.01.T01:intron 55.0%
! GGTGGTTACAATGGTGGAGG+TGG - Chr5:95160043-95160062 MsG0580029312.01.T01:intron 55.0%
!! GGTGGTGGATACAATGGTGG+AGG - Chr5:95160214-95160233 MsG0580029312.01.T01:intron 55.0%
!! GGTGGTGGTGGATACAATGG+TGG - Chr5:95160211-95160230 MsG0580029312.01.T01:intron 55.0%
!! GGTGGTGGTGGTTACAATGG+TGG - Chr5:95160094-95160113 MsG0580029312.01.T01:intron 55.0%
!! GGTGGTTACAATGGTGGTGG+AGG - Chr5:95164636-95164655 MsG0580029312.01.T01:intron 55.0%
AACCACGGTGGAGGTGGTCA+CGG - Chr5:95164777-95164796 MsG0580029312.01.T01:CDS 60.0%
AGAGGTGGCTACAACCACGG+TGG - Chr5:95164765-95164784 MsG0580029312.01.T01:CDS 60.0%
CATGGTGGCCATGGTGGTCA+CGG - Chr5:95164813-95164832 MsG0580029312.01.T01:CDS 60.0%
CGCAGATCCACCACCACGAT+AGG + Chr5:95163763-95163782 None:intergenic 60.0%
GGTGGAGGTGGTTCCCACAA+CGG - Chr5:95160073-95160092 MsG0580029312.01.T01:intron 60.0%
GTGACGACACCCCCACATTG+GGG - Chr5:95162057-95162076 MsG0580029312.01.T01:intron 60.0%
TCGCTTGCATGAGACCGTGG+CGG + Chr5:95161321-95161340 None:intergenic 60.0%
TGAGACCTTCGGGTGTGCCT+AGG + Chr5:95163702-95163721 None:intergenic 60.0%
! GTCCCTAGCGGACATCACTG+AGG + Chr5:95159568-95159587 None:intergenic 60.0%
!! AATGGTGGTGGAGGTCACGG+TGG - Chr5:95164603-95164622 MsG0580029312.01.T01:intron 60.0%
!! AGTGCTCTAGAGACCCGCCA+CGG - Chr5:95161304-95161323 MsG0580029312.01.T01:intron 60.0%
!! TCACGGTGCCGTGCAAACTG+AGG - Chr5:95164830-95164849 MsG0580029312.01.T01:CDS 60.0%
CACGGTGGACACGGTGGACA+TGG - Chr5:95164795-95164814 MsG0580029312.01.T01:CDS 65.0%
CACGGTGGACATGGTGGCCA+TGG - Chr5:95164804-95164823 MsG0580029312.01.T01:CDS 65.0%
CGCTTGCATGAGACCGTGGC+GGG + Chr5:95161320-95161339 None:intergenic 65.0%
GGAGGTCACGGTGGTCATGG+CGG - Chr5:95164612-95164631 MsG0580029312.01.T01:intron 65.0%
GGAGGTCACGGTGGTCATGG+TGG - Chr5:95164612-95164631 MsG0580029312.01.T01:intron 65.0%
GGAGGTGGTCACGGTGGACA+CGG - Chr5:95164786-95164805 MsG0580029312.01.T01:CDS 65.0%
GGAGGTGGTTCCCACAACGG+TGG - Chr5:95160076-95160095 MsG0580029312.01.T01:intron 65.0%
GGCTACAACCACGGTGGAGG+TGG - Chr5:95164771-95164790 MsG0580029312.01.T01:CDS 65.0%
GGGTCGCTTGCATGAGACCG+TGG + Chr5:95161324-95161343 None:intergenic 65.0%
GGTCACGGTGGTCATGGTGG+AGG - Chr5:95164615-95164634 MsG0580029312.01.T01:intron 65.0%
GGTGGACACGGTGGACATGG+TGG - Chr5:95164798-95164817 MsG0580029312.01.T01:CDS 65.0%
GGTGGACATGGTGGCCATGG+TGG - Chr5:95164807-95164826 MsG0580029312.01.T01:CDS 65.0%
GGTGGAGGCGGTTCCCACAA+CGG - Chr5:95160151-95160170 MsG0580029312.01.T01:intron 65.0%
GGTGGAGGTCACGGTGGTCA+TGG - Chr5:95164609-95164628 MsG0580029312.01.T01:intron 65.0%
GGTGGCTACAACCACGGTGG+AGG - Chr5:95164768-95164787 MsG0580029312.01.T01:CDS 65.0%
GGTGGTTCCCACAACGGTGG+TGG - Chr5:95160079-95160098 MsG0580029312.01.T01:intron 65.0%
TGTGGGAACCACCTCCACCG+TGG + Chr5:95160072-95160091 None:intergenic 65.0%
! CACGGTGGTCATGGTGGAGG+TGG - Chr5:95164618-95164637 MsG0580029312.01.T01:intron 65.0%
! GGTTCCCACAACGGTGGTGG+TGG - Chr5:95160082-95160101 MsG0580029312.01.T01:intron 65.0%
CACCGTGACCACCTCCACCG+TGG + Chr5:95164782-95164801 None:intergenic 70.0%
CACGGTGGAGGTGGTCACGG+TGG - Chr5:95164780-95164799 MsG0580029312.01.T01:CDS 70.0%
GAATAGGCCGTGCGCGTGCC+TGG - Chr5:95161273-95161292 MsG0580029312.01.T01:intron 70.0%
GCACGGCACCGTGACCACCA+TGG + Chr5:95164824-95164843 None:intergenic 70.0%
GGAGGCGGTTCCCACAACGG+TGG - Chr5:95160154-95160173 MsG0580029312.01.T01:intron 70.0%
GGCGGTTCCCACAACGGTGG+TGG - Chr5:95160157-95160176 MsG0580029312.01.T01:intron 70.0%
GGTGGTCACGGTGGACACGG+TGG - Chr5:95164789-95164808 MsG0580029312.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 95159510 95164869 95159510 ID=MsG0580029312.01;Name=MsG0580029312.01
Chr5 mRNA 95159510 95164869 95159510 ID=MsG0580029312.01.T01;Parent=MsG0580029312.01;Name=MsG0580029312.01.T01;_AED=0.50;_eAED=0.57;_QI=0|0|0|1|1|1|3|0|225
Chr5 exon 95164761 95164869 95164761 ID=MsG0580029312.01.T01:exon:50052;Parent=MsG0580029312.01.T01
Chr5 exon 95164083 95164380 95164083 ID=MsG0580029312.01.T01:exon:50051;Parent=MsG0580029312.01.T01
Chr5 exon 95159510 95159780 95159510 ID=MsG0580029312.01.T01:exon:50050;Parent=MsG0580029312.01.T01
Chr5 CDS 95164761 95164869 95164761 ID=MsG0580029312.01.T01:cds;Parent=MsG0580029312.01.T01
Chr5 CDS 95164083 95164380 95164083 ID=MsG0580029312.01.T01:cds;Parent=MsG0580029312.01.T01
Chr5 CDS 95159510 95159780 95159510 ID=MsG0580029312.01.T01:cds;Parent=MsG0580029312.01.T01
Gene Sequence

>MsG0580029312.01.T01

ATGGATTCGAAAAAGGCAATCCTCATGCTAGGCCTCTTGGCTATGGCTCTTATTTCCTCAGTGATGTCCGCTAGGGACTTAACTGAAACTTCCACTGATGCTAAGAAGGAGGTTGTTGAAAAGACTAATGAAGTAAACGATGCCAAATATGGTGGTGGTTACAATGGTGGAGGTTATAACCACGGTGGAGGTGGTTCCCACAACGGTGGTGGTGGTTACAATGGTGGAGGTGGTTCCCACAACGGTGGTGGTGGTTACAATGGTGGAGGCGGTTCCCACAACGGTGGTGGTGGTTACAATGGTGGAGGTGGTTCCCACAACGGTGGTGGTGGATACAATGGTGGAGGTGGTTACAACAATGGTGGAGGTGGTTACTGTTGTAAAATAATGACATATAATCATCTCAATTACAATGGTGGTGGAGGTCACGGTGGTCATGGTGGAGGTGGTTACAATGGTGGTGGAGGTCACGGTGGTCATGGCGGTGCTGAATCTGTTGCCGTGCAAACTGAGGAAAAGACTAATGAAGTAAATGATGCCAAATATGGAGGTGGTAGTAATTACAACGATGGTAGAGGTGGCTACAACCACGGTGGAGGTGGTCACGGTGGACACGGTGGACATGGTGGCCATGGTGGTCACGGTGCCGTGCAAACTGAGGACAACACTCAAAACTGA

Protein sequence

>MsG0580029312.01.T01

MDSKKAILMLGLLAMALISSVMSARDLTETSTDAKKEVVEKTNEVNDAKYGGGYNGGGYNHGGGGSHNGGGGYNGGGGSHNGGGGYNGGGGSHNGGGGYNGGGGSHNGGGGYNGGGGYNNGGGGYCCKIMTYNHLNYNGGGGHGGHGGGGYNGGGGHGGHGGAESVAVQTEEKTNEVNDAKYGGGSNYNDGRGGYNHGGGGHGGHGGHGGHGGHGAVQTEDNTQN*