AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080049040.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049040.01.T01 MTR_1g045510 87.379 309 15 1 1 309 1 285 3.91e-176 488
MsG0080049040.01.T01 MTR_7g106440 29.412 323 184 6 1 309 1 293 2.15e-43 151
MsG0080049040.01.T01 MTR_4g104470 46.795 156 80 1 114 266 123 278 1.08e-42 149
MsG0080049040.01.T01 MTR_4g104470 48.780 82 41 1 114 195 217 297 4.27e-19 86.3
MsG0080049040.01.T01 MTR_3g075500 33.540 322 153 8 10 311 9 289 1.52e-42 148
MsG0080049040.01.T01 MTR_3g075500 35.379 277 142 7 10 266 9 268 1.55e-40 142
MsG0080049040.01.T01 MTR_1g064230 31.804 327 146 9 2 307 5 275 4.01e-39 139
MsG0080049040.01.T01 MTR_1g056520 36.190 210 102 2 107 308 102 287 1.02e-36 134
MsG0080049040.01.T01 MTR_3g027140 40.741 162 88 1 114 267 61 222 2.00e-36 131
MsG0080049040.01.T01 MTR_2g097960 31.013 158 106 2 115 269 17 174 5.83e-18 84.3
MsG0080049040.01.T01 MTR_5g030020 36.242 149 88 3 110 252 93 240 9.13e-18 82.8
MsG0080049040.01.T01 MTR_7g118120 30.964 197 112 4 75 268 75 250 1.04e-16 80.9
MsG0080049040.01.T01 MTR_3g099590 30.857 175 105 6 97 262 74 241 1.65e-16 78.6
MsG0080049040.01.T01 MTR_4g070080 39.759 83 46 1 200 278 2 84 2.97e-16 74.3
MsG0080049040.01.T01 MTR_4g070080 43.284 67 38 0 200 266 2 68 1.51e-15 73.2
MsG0080049040.01.T01 MTR_4g131970 29.936 157 107 2 115 268 76 232 3.05e-15 76.3
MsG0080049040.01.T01 MTR_4g070190 38.554 83 47 1 200 278 4 86 5.10e-15 72.0
MsG0080049040.01.T01 MTR_7g013740 41.975 81 46 1 114 193 41 121 1.11e-14 70.5
MsG0080049040.01.T01 MTR_7g013740 32.456 114 53 1 192 305 28 117 4.30e-13 66.2
MsG0080049040.01.T01 MTR_4g109540 40.964 83 48 1 113 195 42 123 1.69e-14 72.8
MsG0080049040.01.T01 MTR_7g013730 40.244 82 48 1 114 194 41 122 2.21e-14 72.0
MsG0080049040.01.T01 MTR_7g013730 33.000 100 43 1 205 304 41 116 9.65e-12 64.3
MsG0080049040.01.T01 MTR_3g065190 31.056 161 106 2 107 266 19 175 3.70e-14 72.8
MsG0080049040.01.T01 MTR_2g022950 28.814 177 101 4 107 268 54 220 7.32e-14 70.9
MsG0080049040.01.T01 MTR_3g080130 37.805 82 50 1 113 193 36 117 8.11e-14 67.8
MsG0080049040.01.T01 MTR_3g080130 43.548 62 35 0 205 266 37 98 6.41e-12 62.4
MsG0080049040.01.T01 MTR_4g070140 39.759 83 46 1 200 278 4 86 1.10e-13 68.9
MsG0080049040.01.T01 MTR_2g022950 25.871 201 123 5 83 268 31 220 2.43e-13 69.3
MsG0080049040.01.T01 MTR_4g086600 27.607 163 110 3 115 269 118 280 2.65e-13 70.5
MsG0080049040.01.T01 MTR_1g020080 29.114 158 109 2 115 269 99 256 3.24e-13 69.3
MsG0080049040.01.T01 MTR_4g124940 29.054 148 99 2 115 262 48 189 3.32e-13 70.1
MsG0080049040.01.T01 MTR_2g022950 28.333 180 104 4 104 268 51 220 4.68e-13 69.7
MsG0080049040.01.T01 MTR_3g025880 37.647 85 52 1 112 196 43 126 4.98e-13 69.7
MsG0080049040.01.T01 MTR_1g080150 44.118 68 38 0 199 266 127 194 1.31e-12 66.6
MsG0080049040.01.T01 MTR_6g040190 27.389 157 108 3 113 268 25 176 2.24e-12 67.8
MsG0080049040.01.T01 MTR_1g020080 29.114 158 109 2 115 269 99 256 2.37e-12 67.4
MsG0080049040.01.T01 MTR_1g061870 28.846 156 108 3 112 266 102 255 3.10e-12 67.4
MsG0080049040.01.T01 MTR_3g109090 28.477 151 102 2 115 265 46 190 3.32e-12 67.0
MsG0080049040.01.T01 MTR_3g109090 28.477 151 102 2 115 265 62 206 3.37e-12 67.0
MsG0080049040.01.T01 MTR_4g109540 37.363 91 48 2 113 195 42 131 3.85e-12 65.9
MsG0080049040.01.T01 MTR_5g017280 31.250 144 90 4 114 254 5 142 5.62e-12 66.2
MsG0080049040.01.T01 MTR_5g017280 31.250 144 90 4 114 254 5 142 6.30e-12 65.9
MsG0080049040.01.T01 MTR_3g084040 46.667 60 32 0 205 264 37 96 7.48e-12 61.6
MsG0080049040.01.T01 MTR_5g097580 29.341 167 91 4 114 262 7 164 1.84e-11 65.1
MsG0080049040.01.T01 MTR_5g097580 29.341 167 91 4 114 262 7 164 1.97e-11 64.7
MsG0080049040.01.T01 MTR_3g084040 34.286 105 44 2 205 309 37 116 2.22e-11 61.2
MsG0080049040.01.T01 MTR_3g084040 37.179 78 48 1 113 190 36 112 8.71e-11 59.7
MsG0080049040.01.T01 MTR_1g115375 27.950 161 112 3 110 268 217 375 2.52e-11 64.7
MsG0080049040.01.T01 MTR_3g055990 31.325 166 89 6 114 262 7 164 3.51e-11 63.9
MsG0080049040.01.T01 MTR_7g105260 44.444 63 35 0 204 266 32 94 3.68e-11 60.5
MsG0080049040.01.T01 MTR_3g055990 31.325 166 89 6 114 262 7 164 4.12e-11 63.9
MsG0080049040.01.T01 MTR_8g022050 28.289 152 101 3 115 266 64 207 4.25e-11 63.5
MsG0080049040.01.T01 MTR_4g052940 22.363 237 147 5 97 307 94 319 5.17e-11 63.2
MsG0080049040.01.T01 MTR_3g101370 29.412 170 103 6 109 268 90 252 7.91e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049040.01.T01 AT1G60000 60.465 215 58 3 97 308 67 257 3.50e-87 262
MsG0080049040.01.T01 AT5G50250 35.793 271 150 6 7 266 12 269 6.14e-43 149
MsG0080049040.01.T01 AT5G50250 43.902 82 46 0 110 191 204 285 1.84e-15 75.9
MsG0080049040.01.T01 AT2G37220 37.037 216 90 3 114 307 92 283 1.32e-39 140
MsG0080049040.01.T01 AT2G37220 38.554 83 51 0 113 195 204 286 7.34e-13 68.2
MsG0080049040.01.T01 AT4G24770 38.776 196 91 3 114 305 151 321 3.38e-39 140
MsG0080049040.01.T01 AT4G24770 47.561 82 43 0 114 195 245 326 2.25e-19 87.4
MsG0080049040.01.T01 AT4G24770 38.776 196 91 3 114 305 151 321 3.38e-39 140
MsG0080049040.01.T01 AT4G24770 47.561 82 43 0 114 195 245 326 2.25e-19 87.4
MsG0080049040.01.T01 AT3G52150 38.547 179 96 2 103 267 62 240 1.26e-37 134
MsG0080049040.01.T01 AT3G52150 38.547 179 96 2 103 267 62 240 1.26e-37 134
MsG0080049040.01.T01 AT3G52380 33.498 203 99 2 114 304 117 295 1.66e-36 134
MsG0080049040.01.T01 AT2G35410 36.598 194 109 6 83 266 68 257 6.79e-28 110
MsG0080049040.01.T01 AT1G01080 35.583 163 92 2 115 264 110 272 1.54e-27 108
MsG0080049040.01.T01 AT1G01080 35.583 163 92 2 115 264 110 272 2.05e-27 108
MsG0080049040.01.T01 AT1G01080 35.366 164 92 3 115 264 110 273 2.44e-26 105
MsG0080049040.01.T01 AT3G53460 54.878 82 36 1 114 195 100 180 2.03e-18 84.7
MsG0080049040.01.T01 AT3G53460 39.759 83 50 0 113 195 257 339 3.36e-13 69.7
MsG0080049040.01.T01 AT3G53460 32.407 108 49 1 205 312 258 341 1.84e-12 67.4
MsG0080049040.01.T01 AT3G53460 54.878 82 36 1 114 195 100 180 2.03e-18 84.7
MsG0080049040.01.T01 AT3G53460 39.759 83 50 0 113 195 257 339 3.36e-13 69.7
MsG0080049040.01.T01 AT3G53460 32.407 108 49 1 205 312 258 341 1.84e-12 67.4
MsG0080049040.01.T01 AT3G53460 54.878 82 36 1 114 195 100 180 2.03e-18 84.7
MsG0080049040.01.T01 AT3G53460 39.759 83 50 0 113 195 257 339 3.36e-13 69.7
MsG0080049040.01.T01 AT3G53460 32.407 108 49 1 205 312 258 341 1.84e-12 67.4
MsG0080049040.01.T01 AT4G09040 32.121 165 105 3 104 262 85 248 2.52e-17 81.3
MsG0080049040.01.T01 AT4G09040 31.646 158 101 3 111 262 32 188 3.66e-17 79.7
MsG0080049040.01.T01 AT5G19350 30.178 169 111 4 104 269 18 182 1.12e-15 77.4
MsG0080049040.01.T01 AT5G19350 30.178 169 111 4 104 269 18 182 1.33e-15 77.4
MsG0080049040.01.T01 AT3G23830 41.558 77 45 0 113 189 35 111 9.37e-15 70.5
MsG0080049040.01.T01 AT3G23830 37.037 108 44 1 205 312 36 119 4.57e-12 63.2
MsG0080049040.01.T01 AT3G23830 41.558 77 45 0 113 189 35 111 9.37e-15 70.5
MsG0080049040.01.T01 AT3G23830 37.037 108 44 1 205 312 36 119 4.57e-12 63.2
MsG0080049040.01.T01 AT4G00830 26.786 224 138 6 69 279 71 281 9.80e-15 75.1
MsG0080049040.01.T01 AT4G00830 26.786 224 138 6 69 279 71 281 9.80e-15 75.1
MsG0080049040.01.T01 AT4G00830 26.786 224 138 6 69 279 71 281 9.80e-15 75.1
MsG0080049040.01.T01 AT3G53460 43.689 103 36 2 114 195 100 201 2.04e-14 73.6
MsG0080049040.01.T01 AT3G53460 39.759 83 50 0 113 195 278 360 4.56e-13 69.3
MsG0080049040.01.T01 AT3G53460 32.407 108 49 1 205 312 279 362 2.40e-12 67.4
MsG0080049040.01.T01 AT1G11650 28.743 167 96 4 115 268 64 220 3.22e-14 72.4
MsG0080049040.01.T01 AT4G00830 26.126 222 134 5 69 279 71 273 3.36e-14 73.2
MsG0080049040.01.T01 AT4G00830 26.126 222 134 5 69 279 71 273 3.36e-14 73.2
MsG0080049040.01.T01 AT5G54900 28.994 169 116 3 102 266 49 217 6.76e-14 72.0
MsG0080049040.01.T01 AT1G11650 28.743 167 96 4 115 268 64 220 1.20e-13 71.2
MsG0080049040.01.T01 AT1G54080 29.412 153 100 4 115 266 65 210 3.05e-13 70.1
MsG0080049040.01.T01 AT5G61030 40.000 80 48 0 111 190 38 117 3.33e-13 69.3
MsG0080049040.01.T01 AT5G61030 40.000 80 48 0 111 190 38 117 3.33e-13 69.3
MsG0080049040.01.T01 AT3G14100 30.263 152 100 3 115 266 61 206 3.54e-13 70.1
MsG0080049040.01.T01 AT4G39260 31.250 112 53 1 200 311 2 89 5.36e-13 64.3
MsG0080049040.01.T01 AT3G26420 32.381 105 47 1 201 305 4 84 6.97e-13 67.8
MsG0080049040.01.T01 AT4G39260 38.806 67 41 0 200 266 2 68 9.27e-13 63.9
MsG0080049040.01.T01 AT4G39260 38.806 67 41 0 200 266 2 68 1.38e-12 64.3
MsG0080049040.01.T01 AT4G13850 40.000 85 50 1 113 197 35 118 1.66e-12 64.3
MsG0080049040.01.T01 AT4G13850 35.185 108 46 1 205 312 36 119 1.85e-12 64.3
MsG0080049040.01.T01 AT4G36960 27.326 172 111 6 114 280 4 166 1.74e-12 67.8
MsG0080049040.01.T01 AT4G36960 27.326 172 111 6 114 280 4 166 1.74e-12 67.8
MsG0080049040.01.T01 AT4G13850 40.000 85 50 1 113 197 35 118 2.01e-12 64.3
MsG0080049040.01.T01 AT4G13850 35.185 108 46 1 205 312 36 119 2.24e-12 64.3
MsG0080049040.01.T01 AT4G13850 40.000 85 50 1 113 197 35 118 2.23e-12 64.3
MsG0080049040.01.T01 AT4G13850 35.185 108 46 1 205 312 36 119 2.48e-12 64.3
MsG0080049040.01.T01 AT4G13850 46.774 62 33 0 205 266 36 97 2.40e-12 63.5
MsG0080049040.01.T01 AT4G13850 41.975 81 46 1 113 192 35 115 2.79e-12 63.5
MsG0080049040.01.T01 AT1G17370 28.378 148 100 2 115 262 56 197 2.73e-12 67.4
MsG0080049040.01.T01 AT1G17370 28.378 148 100 2 115 262 56 197 3.20e-12 67.0
MsG0080049040.01.T01 AT4G39260 38.806 67 41 0 200 266 2 68 3.44e-12 64.3
MsG0080049040.01.T01 AT4G27000 29.677 155 106 2 115 266 82 236 4.32e-12 66.6
MsG0080049040.01.T01 AT1G74230 40.260 77 45 1 113 189 34 109 4.53e-12 65.9
MsG0080049040.01.T01 AT5G40490 26.203 187 129 4 80 262 7 188 5.34e-12 66.6
MsG0080049040.01.T01 AT2G21660 39.394 66 40 0 201 266 5 70 5.52e-12 63.5
MsG0080049040.01.T01 AT3G04500 44.118 68 38 0 199 266 132 199 6.55e-12 64.7
MsG0080049040.01.T01 AT3G13224 29.114 158 95 4 114 263 20 168 7.42e-12 64.7
MsG0080049040.01.T01 AT2G21660 39.394 66 40 0 201 266 5 70 7.63e-12 63.5
MsG0080049040.01.T01 AT4G34110 26.752 157 109 3 113 268 36 187 8.01e-12 66.2
MsG0080049040.01.T01 AT4G34110 29.787 141 96 3 115 254 126 264 7.99e-11 63.2
MsG0080049040.01.T01 AT4G14300 30.303 165 96 4 114 262 7 168 1.02e-11 65.5
MsG0080049040.01.T01 AT4G14300 30.303 165 96 4 114 262 7 168 1.02e-11 65.5
MsG0080049040.01.T01 AT3G08000 42.857 63 36 0 205 267 42 104 1.69e-11 61.6
MsG0080049040.01.T01 AT3G08000 36.842 76 48 0 114 189 42 117 6.09e-11 60.1
MsG0080049040.01.T01 AT1G54080 28.662 157 100 5 115 266 65 214 2.06e-11 64.7
MsG0080049040.01.T01 AT2G18510 29.375 160 108 2 107 265 19 174 3.34e-11 63.9
MsG0080049040.01.T01 AT4G13860 45.161 62 34 0 205 266 4 65 3.78e-11 58.9
MsG0080049040.01.T01 AT3G16380 29.167 168 91 5 113 261 202 360 4.60e-11 63.9
MsG0080049040.01.T01 AT3G16380 31.410 156 100 4 111 262 107 259 7.06e-11 63.2
MsG0080049040.01.T01 AT3G19130 28.659 164 112 4 110 269 106 268 5.28e-11 63.5
MsG0080049040.01.T01 AT1G03457 28.235 170 111 4 103 269 3 164 5.93e-11 63.5
MsG0080049040.01.T01 AT1G47500 28.125 160 109 4 115 268 105 264 6.10e-11 62.8
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 6.45e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 6.45e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 6.45e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 6.45e-11 63.2
MsG0080049040.01.T01 AT2G23350 31.638 177 104 4 104 266 216 389 6.94e-11 63.5
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 7.31e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 7.31e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 7.31e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 7.31e-11 63.2
MsG0080049040.01.T01 AT5G55550 27.811 169 95 6 114 262 7 168 7.31e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCCCCTTCTCATTTCTT+TGG 0.195436 contig628end:+10505 MsG0080049040.01.T01:intergenic
AAAAGCTTGTACTCAGTTTC+AGG 0.198175 contig628end:+11092 MsG0080049040.01.T01:intergenic
GGCATCCATTTCTGCTTTAT+TGG 0.203256 contig628end:+10932 MsG0080049040.01.T01:intergenic
GCCATAGCCACGAGACTTTC+CGG 0.218687 contig628end:+10968 MsG0080049040.01.T01:intergenic
ACTAGGACTAAGCTTTATTT+TGG 0.251905 contig628end:-12380 MsG0080049040.01.T01:CDS
ATATGAAACTTTACACCTTT+AGG 0.288618 contig628end:+10240 MsG0080049040.01.T01:intergenic
TAACACAACAAAATATCATT+TGG 0.295974 contig628end:+10378 MsG0080049040.01.T01:intergenic
GTTGATAGTGCACTACTTGC+AGG 0.298430 contig628end:-12341 MsG0080049040.01.T01:CDS
TCAGGATACAATGGTTCTTT+TGG 0.300465 contig628end:+11110 MsG0080049040.01.T01:intergenic
GCAACAGCAACAGAAATTCT+AGG 0.317781 contig628end:+12530 MsG0080049040.01.T01:intergenic
CAACAGTTTCACACAAGTTA+TGG 0.334238 contig628end:-12556 MsG0080049040.01.T01:CDS
TCAGTGGAACCTTTGTCTAT+TGG 0.359656 contig628end:-12581 MsG0080049040.01.T01:CDS
GCAGGGTTAATTGAGGAGTA+TGG 0.364135 contig628end:-12323 MsG0080049040.01.T01:CDS
GTTCATGGGGCGAACCTTAC+GGG 0.383471 contig628end:-11156 MsG0080049040.01.T01:CDS
AACACAACAAAATATCATTT+GGG 0.387457 contig628end:+10379 MsG0080049040.01.T01:intergenic
CTATGCCAATAAAGCAGAAA+TGG 0.389179 contig628end:-10937 MsG0080049040.01.T01:CDS
CCACATTATCCATGATTGTA+AGG 0.390696 contig628end:+10907 MsG0080049040.01.T01:intergenic
AGTGCACTATCAACACTATA+AGG 0.401443 contig628end:+12350 MsG0080049040.01.T01:intergenic
GTGTTATATGATGGCGAAAC+CGG 0.401723 contig628end:-10987 MsG0080049040.01.T01:CDS
ATGACAAATATCAACATGAT+AGG 0.404200 contig628end:-10208 None:intergenic
GAGACATTTGACAGTGTTGA+TGG 0.406112 contig628end:+12670 MsG0080049040.01.T01:intergenic
CAAGAACATGGAACTGTTGT+CGG 0.409683 contig628end:-11017 MsG0080049040.01.T01:CDS
AACAACTTCTCAGGAGTTCA+TGG 0.409783 contig628end:-11171 MsG0080049040.01.T01:intron
AGTTCATGGGGCGAACCTTA+CGG 0.429710 contig628end:-11157 MsG0080049040.01.T01:CDS
GGAAGCAAGTGCATCATGTT+AGG 0.432485 contig628end:+10475 MsG0080049040.01.T01:intergenic
ACCGGAAAGTCTCGTGGCTA+TGG 0.439880 contig628end:-10969 MsG0080049040.01.T01:CDS
GTAGTAGAAGAGAAGGAGAA+TGG 0.450116 contig628end:-12428 MsG0080049040.01.T01:CDS
AGAGAAAGTTGTAGTGGAAG+AGG 0.455192 contig628end:-12474 MsG0080049040.01.T01:CDS
TGTTGCTGTTGCACAGGAAG+AGG 0.459809 contig628end:-12519 MsG0080049040.01.T01:CDS
ACGAACATTGCGCGTAAGCT+TGG 0.468808 contig628end:-10594 MsG0080049040.01.T01:CDS
GGATGCCGCCCTTACAATCA+TGG 0.469351 contig628end:-10916 MsG0080049040.01.T01:CDS
AACAACATGGCTACTGCAGC+AGG 0.474982 contig628end:-12716 MsG0080049040.01.T01:exon
TAAAACTAAAGTGAATAAGT+TGG 0.475182 contig628end:+12754 MsG0080049040.01.T01:intergenic
TGTGCACTTCAGGAACTAGA+AGG 0.476194 contig628end:-10617 MsG0080049040.01.T01:intron
AGAAGAAGTAGTAGAAGAGA+AGG 0.477009 contig628end:-12435 MsG0080049040.01.T01:CDS
CAAAGGAACTTCTCATCAAA+CGG 0.489309 contig628end:+10454 MsG0080049040.01.T01:intergenic
CATTTCTGCTTTATTGGCAT+AGG 0.501951 contig628end:+10938 MsG0080049040.01.T01:intergenic
AATTTCTGTTGCTGTTGCAC+AGG 0.504166 contig628end:-12525 MsG0080049040.01.T01:CDS
CATGGCTACTGCAGCAGGCA+TGG 0.506381 contig628end:-12711 MsG0080049040.01.T01:CDS
CAGTAATTCAAAATCTTGAC+GGG 0.510605 contig628end:-11268 MsG0080049040.01.T01:CDS
GCAGTAATTCAAAATCTTGA+CGG 0.511117 contig628end:-11269 MsG0080049040.01.T01:CDS
ATGGAACTGTTGTCGGAGCT+AGG 0.513806 contig628end:-11010 MsG0080049040.01.T01:CDS
GGTCGATAGAAACTCGGAAA+AGG 0.517729 contig628end:-10551 MsG0080049040.01.T01:exon
GGATGAAGAGAAAGTTGTAG+TGG 0.517744 contig628end:-12480 MsG0080049040.01.T01:CDS
AACAGTTCCATGTTCTTGAA+AGG 0.519477 contig628end:+11022 MsG0080049040.01.T01:intergenic
GTCAGCGAAATTCACCCGTA+AGG 0.527368 contig628end:+11142 MsG0080049040.01.T01:intergenic
GTTCTTTATGACAGAGACAC+TGG 0.531305 contig628end:-11344 MsG0080049040.01.T01:CDS
GGAGCTAGGGTGTTATATGA+TGG 0.538094 contig628end:-10996 MsG0080049040.01.T01:CDS
CAGTAGCCATGTTGTTGTGA+TGG 0.541710 contig628end:+12723 MsG0080049040.01.T01:intergenic
ATGAAGTATTAAGCACCTAA+AGG 0.546263 contig628end:-10255 MsG0080049040.01.T01:three_prime_UTR
ACACAAGCCTTTCAAGAACA+TGG 0.556072 contig628end:-11029 MsG0080049040.01.T01:CDS
TGCACAGGAAGAGGCTGTTG+TGG 0.557897 contig628end:-12510 MsG0080049040.01.T01:CDS
TGGAACTGTTGTCGGAGCTA+GGG 0.558089 contig628end:-11009 MsG0080049040.01.T01:CDS
CCATGTTGTTGTGATGGTAG+TGG 0.560440 contig628end:+12729 MsG0080049040.01.T01:intergenic
ACAACTTCTCAGGAGTTCAT+GGG 0.561128 contig628end:-11170 MsG0080049040.01.T01:intron
TACTCAGTTTCAGGATACAA+TGG 0.561289 contig628end:+11101 MsG0080049040.01.T01:intergenic
AAGTTCCTTTGCATTTCTTG+TGG 0.561326 contig628end:-10442 MsG0080049040.01.T01:three_prime_UTR
ACTACTTGCAGGGTTAATTG+AGG 0.562878 contig628end:-12330 MsG0080049040.01.T01:CDS
CTGTAGCAGAAGTAGACACT+AGG 0.564886 contig628end:-12397 MsG0080049040.01.T01:CDS
AGAGGCTGTTGTGGCTGTTG+AGG 0.565212 contig628end:-12501 MsG0080049040.01.T01:CDS
ATTGTGCCAAAGAAATGAGA+AGG 0.572599 contig628end:-10511 MsG0080049040.01.T01:three_prime_UTR
GCAATTATATTCAAATGTCT+AGG 0.575382 contig628end:-10736 MsG0080049040.01.T01:CDS
TTGATAGTGCACTACTTGCA+GGG 0.581102 contig628end:-12340 MsG0080049040.01.T01:CDS
TTGTGCCAAAGAAATGAGAA+GGG 0.586939 contig628end:-10510 MsG0080049040.01.T01:three_prime_UTR
GTTTGAAGATGTATCTAATG+AGG 0.590112 contig628end:+12634 MsG0080049040.01.T01:intergenic
AGAAGAGAAGGAGAATGGAG+AGG 0.590345 contig628end:-12423 MsG0080049040.01.T01:CDS
CCTTACAATCATGGATAATG+TGG 0.592838 contig628end:-10907 MsG0080049040.01.T01:intron
AGTGCATCATGTTAGGTACA+TGG 0.596728 contig628end:+10482 MsG0080049040.01.T01:intergenic
CACATTATCCATGATTGTAA+GGG 0.601934 contig628end:+10908 MsG0080049040.01.T01:intergenic
ATTATCCATGATTGTAAGGG+CGG 0.604033 contig628end:+10911 MsG0080049040.01.T01:intergenic
GCTCAAGGAAAACGTTCAGA+AGG 0.609341 contig628end:-10572 MsG0080049040.01.T01:CDS
GCGTATCTTATGAGAATGAG+AGG 0.612358 contig628end:+10405 MsG0080049040.01.T01:intergenic
ATACACCACAAGAAATGCAA+AGG 0.633106 contig628end:+10437 MsG0080049040.01.T01:intergenic
TTGCGCGTAAGCTTGGCTCA+AGG 0.635035 contig628end:-10587 MsG0080049040.01.T01:CDS
GGCGAAACCGGAAAGTCTCG+TGG 0.640311 contig628end:-10975 MsG0080049040.01.T01:CDS
CCACTACCATCACAACAACA+TGG 0.641263 contig628end:-12729 MsG0080049040.01.T01:exon
CCAAAGAAATGAGAAGGGGA+TGG 0.643850 contig628end:-10505 MsG0080049040.01.T01:three_prime_UTR
CAACTTCTCAGGAGTTCATG+GGG 0.648152 contig628end:-11169 MsG0080049040.01.T01:intron
TGTGCCAAAGAAATGAGAAG+GGG 0.683118 contig628end:-10509 MsG0080049040.01.T01:three_prime_UTR
TCAGAAGGTCGATAGAAACT+CGG 0.683837 contig628end:-10557 MsG0080049040.01.T01:exon
ACTGTTGTACCAATAGACAA+AGG 0.689977 contig628end:+12572 MsG0080049040.01.T01:intergenic
TTTGATCACACAATCCTCAG+TGG 0.693978 contig628end:-12597 MsG0080049040.01.T01:CDS
GATGGAAGATGAAAACAATG+AGG 0.726129 contig628end:+12688 MsG0080049040.01.T01:intergenic
TGGTAGCGCAGAATTAATCG+AGG 0.732451 contig628end:-12303 MsG0080049040.01.T01:intron
TGATCAAAGATACAGACATG+CGG 0.735347 contig628end:+12612 MsG0080049039.01.T01:intergenic
AATAGACAAAGGTTCCACTG+AGG 0.798572 contig628end:+12583 MsG0080049039.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTTGAAAATGAAAT+CGG + contig628end:10834-10853 MsG0080049040.01.T01:intergenic 10.0%
!! TAAACTATAAAACTTAGTTA+TGG - contig628end:11432-11451 MsG0080049040.01.T01:intron 15.0%
!!! TAAAGTAATTCTATTAGTTT+TGG - contig628end:10970-10989 MsG0080049040.01.T01:CDS 15.0%
!! AAAAATAATGGCAGAAAATT+TGG + contig628end:11508-11527 MsG0080049040.01.T01:intergenic 20.0%
!! AACACAACAAAATATCATTT+GGG + contig628end:12599-12618 MsG0080049040.01.T01:intergenic 20.0%
!! CAGAAAAATTTCATTTCAAT+TGG + contig628end:11076-11095 MsG0080049040.01.T01:intergenic 20.0%
!! CTATCTATATATGATGATTT+AGG - contig628end:11030-11049 MsG0080049040.01.T01:CDS 20.0%
!! TAAAACTAAAGTGAATAAGT+TGG + contig628end:10224-10243 MsG0080049040.01.T01:intergenic 20.0%
!! TAACACAACAAAATATCATT+TGG + contig628end:12600-12619 MsG0080049040.01.T01:intergenic 20.0%
!!! AATGATTTGTATATGTCTTT+AGG - contig628end:11609-11628 MsG0080049040.01.T01:intron 20.0%
!!! GTAATTGTGATTTAAAACTT+CGG - contig628end:12276-12295 MsG0080049040.01.T01:intron 20.0%
! AGTCACAATAATGAGTTATT+TGG + contig628end:11395-11414 MsG0080049040.01.T01:intergenic 25.0%
! ATATGAAACTTTACACCTTT+AGG + contig628end:12738-12757 MsG0080049040.01.T01:intergenic 25.0%
! ATCATACAATACAAGTTTGA+GGG + contig628end:11541-11560 MsG0080049040.01.T01:intergenic 25.0%
! CAAACTTGTATTGTATGATA+TGG - contig628end:11542-11561 MsG0080049040.01.T01:intron 25.0%
! GCAATTATATTCAAATGTCT+AGG - contig628end:12239-12258 MsG0080049040.01.T01:intron 25.0%
! GGATGTATACTGAAAAATAA+TGG + contig628end:11520-11539 MsG0080049040.01.T01:intergenic 25.0%
! GTCACAATAATGAGTTATTT+GGG + contig628end:11394-11413 MsG0080049040.01.T01:intergenic 25.0%
! TATCATACAATACAAGTTTG+AGG + contig628end:11542-11561 MsG0080049040.01.T01:intergenic 25.0%
!! ACTTAGTTATGGATAGATTT+TGG - contig628end:11443-11462 MsG0080049040.01.T01:intron 25.0%
AATACTCATCGTTAAGAACT+AGG - contig628end:10717-10736 MsG0080049040.01.T01:intron 30.0%
ATTAACATTACTGTAACTCC+AGG + contig628end:11592-11611 MsG0080049040.01.T01:intergenic 30.0%
CACATTATCCATGATTGTAA+GGG + contig628end:12070-12089 MsG0080049040.01.T01:intergenic 30.0%
CAGTAATTCAAAATCTTGAC+GGG - contig628end:11707-11726 MsG0080049040.01.T01:intron 30.0%
GCAGTAATTCAAAATCTTGA+CGG - contig628end:11706-11725 MsG0080049040.01.T01:intron 30.0%
GTGCATAAAAGATTGAATAG+AGG + contig628end:12106-12125 MsG0080049040.01.T01:intergenic 30.0%
GTTTGAAGATGTATCTAATG+AGG + contig628end:10344-10363 MsG0080049040.01.T01:intergenic 30.0%
TTGTAAATGAACAACTTCTC+AGG - contig628end:11795-11814 MsG0080049040.01.T01:intron 30.0%
! ATGAAGTATTAAGCACCTAA+AGG - contig628end:12720-12739 MsG0080049040.01.T01:exon 30.0%
! GATGCAACTGATAATGATAA+TGG + contig628end:11356-11375 MsG0080049040.01.T01:intergenic 30.0%
! TGTATCTAATGAGGAGTTTT+TGG + contig628end:10335-10354 MsG0080049040.01.T01:intergenic 30.0%
! TTACACGTGAGTTTTTACTA+TGG + contig628end:11156-11175 MsG0080049040.01.T01:intergenic 30.0%
! TTCTGAAAATCTATGCAACT+AGG - contig628end:11091-11110 MsG0080049040.01.T01:CDS 30.0%
!!! ACTAGGACTAAGCTTTATTT+TGG - contig628end:10595-10614 MsG0080049040.01.T01:CDS 30.0%
!!! ATTTTAGCTAGTGCTAACAT+TGG - contig628end:12622-12641 MsG0080049040.01.T01:CDS 30.0%
!!! GCACATCGACTTTTAAAAAA+CGG - contig628end:12122-12141 MsG0080049040.01.T01:intron 30.0%
!!! TACAATGGTTCTTTTGGTTT+AGG + contig628end:11862-11881 MsG0080049040.01.T01:intergenic 30.0%
AAAAGCTTGTACTCAGTTTC+AGG + contig628end:11886-11905 MsG0080049039.01.T01:intergenic 35.0%
AACAGTTCCATGTTCTTGAA+AGG + contig628end:11956-11975 MsG0080049040.01.T01:intergenic 35.0%
AAGTTCCTTTGCATTTCTTG+TGG - contig628end:12533-12552 MsG0080049040.01.T01:CDS 35.0%
ACTGTTGTACCAATAGACAA+AGG + contig628end:10406-10425 MsG0080049040.01.T01:intergenic 35.0%
AGAAGAAGTAGTAGAAGAGA+AGG - contig628end:10540-10559 MsG0080049040.01.T01:three_prime_UTR 35.0%
AGTGCACTATCAACACTATA+AGG + contig628end:10628-10647 MsG0080049040.01.T01:intergenic 35.0%
ATACACCACAAGAAATGCAA+AGG + contig628end:12541-12560 MsG0080049040.01.T01:intergenic 35.0%
ATTATCCATGATTGTAAGGG+CGG + contig628end:12067-12086 MsG0080049040.01.T01:intergenic 35.0%
ATTGTGCCAAAGAAATGAGA+AGG - contig628end:12464-12483 MsG0080049040.01.T01:CDS 35.0%
CAAAGGAACTTCTCATCAAA+CGG + contig628end:12524-12543 MsG0080049040.01.T01:intergenic 35.0%
CAACAGTTTCACACAAGTTA+TGG - contig628end:10419-10438 MsG0080049040.01.T01:three_prime_UTR 35.0%
CCACATTATCCATGATTGTA+AGG + contig628end:12071-12090 MsG0080049040.01.T01:intergenic 35.0%
CCAGGAATGAAACATAAACA+TGG + contig628end:11574-11593 MsG0080049040.01.T01:intergenic 35.0%
CCATGTTTATGTTTCATTCC+TGG - contig628end:11571-11590 MsG0080049040.01.T01:intron 35.0%
CCTTACAATCATGGATAATG+TGG - contig628end:12068-12087 MsG0080049040.01.T01:intron 35.0%
CTATGCCAATAAAGCAGAAA+TGG - contig628end:12038-12057 MsG0080049040.01.T01:intron 35.0%
GATGGAAGATGAAAACAATG+AGG + contig628end:10290-10309 MsG0080049040.01.T01:intergenic 35.0%
TACGTTTGTGTGTGTAAACA+AGG - contig628end:12302-12321 MsG0080049040.01.T01:intron 35.0%
TACTCAGTTTCAGGATACAA+TGG + contig628end:11877-11896 MsG0080049040.01.T01:intergenic 35.0%
TCAGATTAAATACGCGTCTA+GGG - contig628end:10766-10785 MsG0080049040.01.T01:CDS 35.0%
TGATCAAAGATACAGACATG+CGG + contig628end:10366-10385 MsG0080049040.01.T01:intergenic 35.0%
TTATTTCAGACTCTGATCGA+TGG + contig628end:11292-11311 MsG0080049040.01.T01:intergenic 35.0%
TTCAGATTAAATACGCGTCT+AGG - contig628end:10765-10784 MsG0080049040.01.T01:CDS 35.0%
TTGTGCCAAAGAAATGAGAA+GGG - contig628end:12465-12484 MsG0080049040.01.T01:CDS 35.0%
! ACTGAGTACAAGCTTTTTGT+TGG - contig628end:11889-11908 MsG0080049040.01.T01:intron 35.0%
! CATTTCTGCTTTATTGGCAT+AGG + contig628end:12040-12059 MsG0080049040.01.T01:intergenic 35.0%
! CTGAGTACAAGCTTTTTGTT+GGG - contig628end:11890-11909 MsG0080049040.01.T01:intron 35.0%
! CTTTGTAATTTGTGCACTTC+AGG - contig628end:12348-12367 MsG0080049040.01.T01:CDS 35.0%
! GCGTATTTAATCTGAAGTGT+CGG + contig628end:10761-10780 MsG0080049040.01.T01:intergenic 35.0%
! TCAGGATACAATGGTTCTTT+TGG + contig628end:11868-11887 MsG0080049040.01.T01:intergenic 35.0%
!! CTAATGAGGAGTTTTTGGAA+CGG + contig628end:10330-10349 MsG0080049040.01.T01:intergenic 35.0%
AACAACTTCTCAGGAGTTCA+TGG - contig628end:11804-11823 MsG0080049040.01.T01:intron 40.0%
AATAGACAAAGGTTCCACTG+AGG + contig628end:10395-10414 MsG0080049040.01.T01:intergenic 40.0%
ACAACTTCTCAGGAGTTCAT+GGG - contig628end:11805-11824 MsG0080049040.01.T01:intron 40.0%
ACACAAGCCTTTCAAGAACA+TGG - contig628end:11946-11965 MsG0080049040.01.T01:intron 40.0%
ACTACTTGCAGGGTTAATTG+AGG - contig628end:10645-10664 MsG0080049040.01.T01:intron 40.0%
AGAGACACTGGAAAAAGTAG+AGG - contig628end:11643-11662 MsG0080049040.01.T01:intron 40.0%
AGTGCATCATGTTAGGTACA+TGG + contig628end:12496-12515 MsG0080049040.01.T01:intergenic 40.0%
CAAGAACATGGAACTGTTGT+CGG - contig628end:11958-11977 MsG0080049040.01.T01:intron 40.0%
CTGATCGATGGAAATCAAAC+TGG + contig628end:11280-11299 MsG0080049040.01.T01:intergenic 40.0%
GCAACAGCAACAGAAATTCT+AGG + contig628end:10448-10467 MsG0080049040.01.T01:intergenic 40.0%
GCGTATCTTATGAGAATGAG+AGG + contig628end:12573-12592 MsG0080049040.01.T01:intergenic 40.0%
GGATGAAGAGAAAGTTGTAG+TGG - contig628end:10495-10514 MsG0080049040.01.T01:three_prime_UTR 40.0%
GGCATCCATTTCTGCTTTAT+TGG + contig628end:12046-12065 MsG0080049040.01.T01:intergenic 40.0%
GTAGTAGAAGAGAAGGAGAA+TGG - contig628end:10547-10566 MsG0080049040.01.T01:exon 40.0%
GTTCGCTCAAATTCAAGTCA+CGG + contig628end:12149-12168 MsG0080049040.01.T01:intergenic 40.0%
GTTCTTTATGACAGAGACAC+TGG - contig628end:11631-11650 MsG0080049040.01.T01:intron 40.0%
TCAGAAGGTCGATAGAAACT+CGG - contig628end:12418-12437 MsG0080049040.01.T01:CDS 40.0%
TCAGTGGAACCTTTGTCTAT+TGG - contig628end:10394-10413 MsG0080049040.01.T01:three_prime_UTR 40.0%
TGTGCCAAAGAAATGAGAAG+GGG - contig628end:12466-12485 MsG0080049040.01.T01:CDS 40.0%
TTCGCTCAAATTCAAGTCAC+GGG + contig628end:12148-12167 MsG0080049040.01.T01:intergenic 40.0%
TTTGATCACACAATCCTCAG+TGG - contig628end:10378-10397 MsG0080049040.01.T01:three_prime_UTR 40.0%
! AATTTCTGTTGCTGTTGCAC+AGG - contig628end:10450-10469 MsG0080049040.01.T01:three_prime_UTR 40.0%
! AGAGAAAGTTGTAGTGGAAG+AGG - contig628end:10501-10520 MsG0080049040.01.T01:three_prime_UTR 40.0%
! CAAGCTTTTTGTTGGGAACT+TGG - contig628end:11897-11916 MsG0080049040.01.T01:intron 40.0%
! GAGACATTTGACAGTGTTGA+TGG + contig628end:10308-10327 MsG0080049040.01.T01:intergenic 40.0%
! GTGTTATATGATGGCGAAAC+CGG - contig628end:11988-12007 MsG0080049040.01.T01:intron 40.0%
! TTTTTGTTGGGAACTTGGCT+TGG - contig628end:11902-11921 MsG0080049040.01.T01:intron 40.0%
!! TTGATAGTGCACTACTTGCA+GGG - contig628end:10635-10654 MsG0080049040.01.T01:intron 40.0%
AGAAGAGAAGGAGAATGGAG+AGG - contig628end:10552-10571 MsG0080049040.01.T01:exon 45.0%
CAACTTCTCAGGAGTTCATG+GGG - contig628end:11806-11825 MsG0080049040.01.T01:intron 45.0%
CAGTAGCCATGTTGTTGTGA+TGG + contig628end:10255-10274 MsG0080049040.01.T01:intergenic 45.0%
CCAAAGAAATGAGAAGGGGA+TGG - contig628end:12470-12489 MsG0080049040.01.T01:CDS 45.0%
CCACTACCATCACAACAACA+TGG - contig628end:10246-10265 MsG0080049040.01.T01:three_prime_UTR 45.0%
CCATCCCCTTCTCATTTCTT+TGG + contig628end:12473-12492 MsG0080049040.01.T01:intergenic 45.0%
CCATGTTGTTGTGATGGTAG+TGG + contig628end:10249-10268 MsG0080049040.01.T01:intergenic 45.0%
CTGTAGCAGAAGTAGACACT+AGG - contig628end:10578-10597 MsG0080049040.01.T01:CDS 45.0%
GAAGATTGTGTGCTGTAGCT+AGG - contig628end:10918-10937 MsG0080049040.01.T01:CDS 45.0%
GCAGGGTTAATTGAGGAGTA+TGG - contig628end:10652-10671 MsG0080049040.01.T01:intron 45.0%
GCTCAAGGAAAACGTTCAGA+AGG - contig628end:12403-12422 MsG0080049040.01.T01:CDS 45.0%
GGAAGCAAGTGCATCATGTT+AGG + contig628end:12503-12522 MsG0080049040.01.T01:intergenic 45.0%
GGTCGATAGAAACTCGGAAA+AGG - contig628end:12424-12443 MsG0080049040.01.T01:CDS 45.0%
TGTGCACTTCAGGAACTAGA+AGG - contig628end:12358-12377 MsG0080049040.01.T01:CDS 45.0%
TTGTGTGCTGTAGCTAGGAT+AGG - contig628end:10923-10942 MsG0080049040.01.T01:CDS 45.0%
! GGAGCTAGGGTGTTATATGA+TGG - contig628end:11979-11998 MsG0080049040.01.T01:intron 45.0%
! GTCTAGGGTTCAACATGTGT+TGG - contig628end:10781-10800 MsG0080049040.01.T01:CDS 45.0%
! TGGTAGCGCAGAATTAATCG+AGG - contig628end:10672-10691 MsG0080049040.01.T01:intron 45.0%
!! GTTGATAGTGCACTACTTGC+AGG - contig628end:10634-10653 MsG0080049040.01.T01:intron 45.0%
!! TTGGTGTCACAACTCACAAG+TGG - contig628end:10800-10819 MsG0080049040.01.T01:intron 45.0%
AACAACATGGCTACTGCAGC+AGG - contig628end:10259-10278 MsG0080049040.01.T01:three_prime_UTR 50.0%
ACGAACATTGCGCGTAAGCT+TGG - contig628end:12381-12400 MsG0080049040.01.T01:CDS 50.0%
AGTTCATGGGGCGAACCTTA+CGG - contig628end:11818-11837 MsG0080049040.01.T01:intron 50.0%
ATGGAACTGTTGTCGGAGCT+AGG - contig628end:11965-11984 MsG0080049040.01.T01:intron 50.0%
GTCAGCGAAATTCACCCGTA+AGG + contig628end:11836-11855 MsG0080049040.01.T01:intergenic 50.0%
TGGAACTGTTGTCGGAGCTA+GGG - contig628end:11966-11985 MsG0080049040.01.T01:intron 50.0%
! TGTTGCTGTTGCACAGGAAG+AGG - contig628end:10456-10475 MsG0080049040.01.T01:three_prime_UTR 50.0%
ACCGGAAAGTCTCGTGGCTA+TGG - contig628end:12006-12025 MsG0080049040.01.T01:intron 55.0%
AGAGGCTGTTGTGGCTGTTG+AGG - contig628end:10474-10493 MsG0080049040.01.T01:three_prime_UTR 55.0%
GCCATAGCCACGAGACTTTC+CGG + contig628end:12010-12029 MsG0080049040.01.T01:intergenic 55.0%
GGATGCCGCCCTTACAATCA+TGG - contig628end:12059-12078 MsG0080049040.01.T01:intron 55.0%
GTTCATGGGGCGAACCTTAC+GGG - contig628end:11819-11838 MsG0080049040.01.T01:intron 55.0%
TGCACAGGAAGAGGCTGTTG+TGG - contig628end:10465-10484 MsG0080049040.01.T01:three_prime_UTR 55.0%
TTGCGCGTAAGCTTGGCTCA+AGG - contig628end:12388-12407 MsG0080049040.01.T01:CDS 55.0%
CATGGCTACTGCAGCAGGCA+TGG - contig628end:10264-10283 MsG0080049040.01.T01:three_prime_UTR 60.0%
GGCGAAACCGGAAAGTCTCG+TGG - contig628end:12000-12019 MsG0080049040.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
contig628end gene 10211 12786 10211 ID=MsG0080049040.01;Name=MsG0080049040.01
contig628end mRNA 10211 12786 10211 ID=MsG0080049040.01.T01;Parent=MsG0080049040.01;Name=MsG0080049040.01.T01;_AED=0.44;_eAED=0.47;_QI=54|0.5|0.8|1|1|1|5|354|312
contig628end exon 12304 12786 12304 ID=MsG0080049040.01.T01:exon:5027;Parent=MsG0080049040.01.T01
contig628end exon 11265 11366 11265 ID=MsG0080049040.01.T01:exon:5028;Parent=MsG0080049040.01.T01
contig628end exon 10908 11180 10908 ID=MsG0080049040.01.T01:exon:5029;Parent=MsG0080049040.01.T01
contig628end exon 10730 10801 10730 ID=MsG0080049040.01.T01:exon:5030;Parent=MsG0080049040.01.T01
contig628end exon 10211 10627 10211 ID=MsG0080049040.01.T01:exon:5031;Parent=MsG0080049040.01.T01
contig628end five_prime_UTR 12733 12786 12733 ID=MsG0080049040.01.T01:five_prime_utr;Parent=MsG0080049040.01.T01
contig628end CDS 12304 12732 12304 ID=MsG0080049040.01.T01:cds;Parent=MsG0080049040.01.T01
contig628end CDS 11265 11366 11265 ID=MsG0080049040.01.T01:cds;Parent=MsG0080049040.01.T01
contig628end CDS 10908 11180 10908 ID=MsG0080049040.01.T01:cds;Parent=MsG0080049040.01.T01
contig628end CDS 10730 10801 10730 ID=MsG0080049040.01.T01:cds;Parent=MsG0080049040.01.T01
contig628end CDS 10565 10627 10565 ID=MsG0080049040.01.T01:cds;Parent=MsG0080049040.01.T01
contig628end three_prime_UTR 10211 10564 10211 ID=MsG0080049040.01.T01:three_prime_utr;Parent=MsG0080049040.01.T01
Gene Sequence

>MsG0080049040.01.T01

ATGGCTACTGCAGCAGGCATGGCCTCATTGTTTTCATCTTCCATCAACACTGTCAAATGTCTCCGTTCCAAAAACTCCTCATTAGATACATCTTCAAACCGCATGTCTGTATCTTTGATCACACAATCCTCAGTGGAACCTTTGTCTATTGGTACAACAGTTTCACACAAGTTATGGTTTCCTAGAATTTCTGTTGCTGTTGCACAGGAAGAGGCTGTTGTGGCTGTTGAGGATGAAGAGAAAGTTGTAGTGGAAGAGGAAGAAAAAGAAGAAGAAGAAGAAGTAGTAGAAGAGAAGGAGAATGGAGAGGAAACTGTAGCAGAAGTAGACACTAGGACTAAGCTTTATTTTGGTAATTTGCCTTATAGTGTTGATAGTGCACTACTTGCAGGGTTAATTGAGGAGTATGGTAGCGCAGAATTAATCGAGGTTCTTTATGACAGAGACACTGGAAAAAGTAGAGGCTTTGCATTTGTGACAATGAGTTGTGTTGAAGATTGTAATGCAGTAATTCAAAATCTTGACGGGAAAGAGTTCATGGGGCGAACCTTACGGGTGAATTTCGCTGACAAACCTAAACCAAAAGAACCATTGTATCCTGAAACTGAGTACAAGCTTTTTGTTGGGAACTTGGCTTGGACAGTAACTTCTGAGAGTCTTACACAAGCCTTTCAAGAACATGGAACTGTTGTCGGAGCTAGGGTGTTATATGATGGCGAAACCGGAAAGTCTCGTGGCTATGGCTTTGTTTCCTATGCCAATAAAGCAGAAATGGATGCCGCCCTTACAATCATGGATAATGTGCATAATGTGACAACAATTGACGCTGAATCTGCAGTATTTGACTGCAATTATATTCAAATGTCTAGGATAGCTGAACTAGAAGGACGAACATTGCGCGTAAGCTTGGCTCAAGGAAAACGTTCAGAAGGTCGATAG

Protein sequence

>MsG0080049040.01.T01

MATAAGMASLFSSSINTVKCLRSKNSSLDTSSNRMSVSLITQSSVEPLSIGTTVSHKLWFPRISVAVAQEEAVVAVEDEEKVVVEEEEKEEEEEVVEEKENGEETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFADKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLYDGETGKSRGYGFVSYANKAEMDAALTIMDNVHNVTTIDAESAVFDCNYIQMSRIAELEGRTLRVSLAQGKRSEGR*