AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011697.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011697.01.T01 MTR_3g008960 71.795 117 33 0 138 254 369 485 3.35e-49 171
MsG0380011697.01.T01 MTR_3g008960 94.545 55 3 0 1 55 1 55 2.23e-28 114
MsG0380011697.01.T01 MTR_3g008960 75.000 72 17 1 56 126 159 230 2.13e-25 105
MsG0380011697.01.T01 MTR_3g008960 96.875 32 1 0 106 137 267 298 9.26e-14 72.0
MsG0380011697.01.T01 MTR_3g009010 64.957 117 41 0 138 254 442 558 1.28e-41 151
MsG0380011697.01.T01 MTR_3g009010 92.727 55 4 0 1 55 72 126 6.56e-27 110
MsG0380011697.01.T01 MTR_3g009010 72.973 74 19 1 54 126 230 303 2.54e-24 103
MsG0380011697.01.T01 MTR_3g009010 86.486 37 5 0 106 142 340 376 5.74e-15 75.5
MsG0380011697.01.T01 MTR_3g009030 63.200 125 30 2 138 254 377 493 2.28e-40 147
MsG0380011697.01.T01 MTR_3g009030 56.164 73 29 3 56 125 165 237 2.40e-14 73.6
MsG0380011697.01.T01 MTR_3g009030 76.271 59 10 1 1 55 1 59 9.64e-14 72.0
MsG0380011697.01.T01 MTR_3g009030 65.909 44 15 0 107 150 276 319 7.60e-11 63.2
MsG0380011697.01.T01 MTR_3g009020 57.983 119 46 2 138 254 353 469 2.35e-39 144
MsG0380011697.01.T01 MTR_3g009020 58.667 75 29 2 54 126 140 214 3.03e-17 82.4
MsG0380011697.01.T01 MTR_3g009020 93.548 31 2 0 107 137 252 282 2.77e-11 64.3
MsG0380011697.01.T01 MTR_8g091310 51.261 119 53 3 138 253 385 501 1.34e-29 117
MsG0380011697.01.T01 MTR_4g035760 36.441 118 74 1 138 254 58 175 5.54e-20 85.9
MsG0380011697.01.T01 MTR_1g098430 61.017 59 21 1 253 309 123 181 2.08e-18 81.6
MsG0380011697.01.T01 MTR_5g062190 36.441 118 74 1 138 254 386 503 2.71e-18 85.5
MsG0380011697.01.T01 MTR_5g062290 42.342 111 47 3 153 254 399 501 5.51e-17 81.6
MsG0380011697.01.T01 MTR_1g098200 53.704 54 23 1 255 306 123 176 3.40e-11 61.6
MsG0380011697.01.T01 MTR_1g098400 53.704 54 23 1 255 306 123 176 3.40e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 65 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTATTTGAGCTTCTTAT+TGG 0.155909 3:-3653194 MsG0380011697.01.T01:CDS
GCTTACAAAGCTGTGAATTT+AGG 0.195268 3:-3653136 MsG0380011697.01.T01:CDS
CAGATTATCAAGGCACAAAT+TGG 0.214773 3:-3651067 MsG0380011697.01.T01:CDS
GCAACATTGGATGGGCCTAT+TGG 0.302594 3:-3646380 MsG0380011697.01.T01:CDS
ATGGTTATATTGACATTTAT+AGG 0.303157 3:+3646356 None:intergenic
GCAGTTGAAGGTTCTCAAAA+TGG 0.307654 3:-3647386 MsG0380011697.01.T01:CDS
CAACATTGGATGGGCCTATT+GGG 0.352235 3:-3646379 MsG0380011697.01.T01:CDS
AAGCTGTGAATTTAGGAAAC+TGG 0.354101 3:-3653129 MsG0380011697.01.T01:CDS
AAGAAGCTCAAATAATAGTT+TGG 0.360133 3:+3653199 None:intergenic
TTGACATTTATAGGCCCAAT+AGG 0.385790 3:+3646365 None:intergenic
CAATTATAACTAATAGTATC+AGG 0.401954 3:+3643821 None:intergenic
TTCCAAGTTTATCAATAGTT+CGG 0.404395 3:+3643668 None:intergenic
CCTTTGTGAGCTTGTTTCCA+TGG 0.415433 3:-3643705 MsG0380011697.01.T01:CDS
TTTGTGCTTGGACATATCTC+TGG 0.424881 3:+3646420 None:intergenic
ATGGAACCTTCTCGCTTTGA+CGG 0.442568 3:-3653088 MsG0380011697.01.T01:CDS
GCATTACTACAATATGTATT+CGG 0.453344 3:-3646706 MsG0380011697.01.T01:CDS
TATTCTCATGCAACATTGGA+TGG 0.464122 3:-3646389 MsG0380011697.01.T01:CDS
CACAAAGGAATTCCATTTGA+CGG 0.464188 3:+3643720 None:intergenic
ACATAAGAAATGACAGAGCC+TGG 0.466178 3:-3646644 MsG0380011697.01.T01:CDS
TACTGCTCTTAACCGTCAAA+TGG 0.470021 3:-3643732 MsG0380011697.01.T01:CDS
GTGGATTTGCATGCAGTTGA+AGG 0.473376 3:-3647398 MsG0380011697.01.T01:CDS
CTCAAGTGGTTGATCGAGAA+TGG 0.484613 3:-3646327 MsG0380011697.01.T01:intron
CTTCTTCTCTCATTTGTCAA+AGG 0.486302 3:-3646753 MsG0380011697.01.T01:CDS
TGCCATGACCATTAGTAAGT+TGG 0.491605 3:+3650985 None:intergenic
AATTGTCAACAAAGATCTCT+TGG 0.496005 3:-3653065 MsG0380011697.01.T01:intron
CGGTTAAGAGCAGTAACAGC+AGG 0.501469 3:+3643740 None:intergenic
ATAAATGTCAATATAACCAT+TGG 0.502897 3:-3646353 MsG0380011697.01.T01:CDS
AAGAGATGGATATACAGAAT+GGG 0.504441 3:-3647345 MsG0380011697.01.T01:CDS
ATGTATTCGGATAAATTCAA+TGG 0.504587 3:-3646693 MsG0380011697.01.T01:CDS
GGAGAGTACCAACTTACTAA+TGG 0.504832 3:-3650993 MsG0380011697.01.T01:CDS
CAAGAGATGGATATACAGAA+TGG 0.505790 3:-3647346 MsG0380011697.01.T01:CDS
GAGATATGTCCAAGCACAAA+TGG 0.509273 3:-3646417 MsG0380011697.01.T01:CDS
GACAGAGCCTGGGATCTTAG+TGG 0.512889 3:-3646633 MsG0380011697.01.T01:CDS
ACTGGCTTGTTGCTGAAGGA+TGG 0.521485 3:-3653111 MsG0380011697.01.T01:CDS
ACAATTGTAAACACATTACA+AGG 0.521868 3:-3651014 MsG0380011697.01.T01:CDS
TTTCTTACTCGCATAACTTG+AGG 0.526026 3:+3650954 None:intergenic
AGATTATCAAGGCACAAATT+GGG 0.526125 3:-3651066 MsG0380011697.01.T01:CDS
GAGCATAGTGGGACAAGAGA+TGG 0.527467 3:-3647359 MsG0380011697.01.T01:CDS
AATACACATCCATTTGTGCT+TGG 0.540193 3:+3646408 None:intergenic
GTAGGGGATGGACAGCTGAA+TGG 0.542374 3:-3646474 MsG0380011697.01.T01:intron
GCATGGGATGAAAGTGATTG+TGG 0.543506 3:-3647417 MsG0380011697.01.T01:CDS
ACAGCTGAATGGAGCATACA+AGG 0.544710 3:-3646463 MsG0380011697.01.T01:CDS
TACTCTATGCGATAGTGCAA+TGG 0.545303 3:-3643777 MsG0380011697.01.T01:CDS
GCTTGTTGCTGAAGGATGGA+TGG 0.547369 3:-3653107 MsG0380011697.01.T01:CDS
GGAAACTGGCTTGTTGCTGA+AGG 0.571457 3:-3653115 MsG0380011697.01.T01:CDS
CTATGCGATAGTGCAATGGC+TGG 0.572073 3:-3643773 MsG0380011697.01.T01:CDS
TGTGTATTCTCATGCAACAT+TGG 0.582443 3:-3646393 MsG0380011697.01.T01:CDS
TTGGGATGACAATGATCCAT+CGG 0.585148 3:-3651048 MsG0380011697.01.T01:CDS
TACCAACTTACTAATGGTCA+TGG 0.602763 3:-3650987 MsG0380011697.01.T01:CDS
ACAATTCCGTCAAAGCGAGA+AGG 0.606902 3:+3653082 None:intergenic
TCAGTGACTGCAGATTATCA+AGG 0.606979 3:-3651077 MsG0380011697.01.T01:CDS
TATTGTAGTAATGCACATCA+AGG 0.609097 3:+3646715 None:intergenic
CATAAGAAATGACAGAGCCT+GGG 0.612530 3:-3646643 MsG0380011697.01.T01:CDS
ATTCTCATGCAACATTGGAT+GGG 0.620925 3:-3646388 MsG0380011697.01.T01:CDS
ATTGCACTATCGCATAGAGT+AGG 0.621035 3:+3643779 None:intergenic
CGGAAGTTGATGCATAGCCA+TGG 0.627927 3:+3643688 None:intergenic
AGAGACACCACTAAGATCCC+AGG 0.628976 3:+3646626 None:intergenic
TCTCTGGTAGTCTTGCGCAT+AGG 0.633209 3:+3646436 None:intergenic
GATACTATTAGTTATAATTG+CGG 0.634421 3:-3643818 MsG0380011697.01.T01:CDS
ATAACCATTGGAGTCTCAAG+TGG 0.641339 3:-3646341 MsG0380011697.01.T01:CDS
TAAGCAAACGAAAGAGAGTG+AGG 0.651768 3:+3653154 None:intergenic
AGAGATGGATATACAGAATG+GGG 0.651789 3:-3647344 MsG0380011697.01.T01:intron
CCATGGAAACAAGCTCACAA+AGG 0.665361 3:+3643705 None:intergenic
TCAACCACTTGAGACTCCAA+TGG 0.670774 3:+3646337 None:intergenic
GGTTAAGAGCAGTAACAGCA+GGG 0.672817 3:+3643741 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATAATTTATTTATA+TGG + Chr3:3643856-3643875 None:intergenic 0.0%
!! AATTTATAATTTATTTATAT+GGG + Chr3:3643855-3643874 None:intergenic 0.0%
!!! ATTATTATTTTAAATAAAAT+TGG - Chr3:3649334-3649353 MsG0380011697.01.T01:intron 0.0%
!!! TTATTATTTTAAATAAAATT+GGG - Chr3:3649335-3649354 MsG0380011697.01.T01:intron 0.0%
!! AAATAATATTAATGATTTAC+TGG - Chr3:3644307-3644326 MsG0380011697.01.T01:intron 10.0%
!! CTATACAAAAAATAAATAAA+AGG - Chr3:3650818-3650837 MsG0380011697.01.T01:intron 10.0%
!!! AAATCACTTATTTTAATAAA+AGG - Chr3:3652210-3652229 MsG0380011697.01.T01:intron 10.0%
!!! AATCACTTATTTTAATAAAA+GGG - Chr3:3652211-3652230 MsG0380011697.01.T01:intron 10.0%
!!! ATTTAAACCTTTTAATTTTA+AGG - Chr3:3651383-3651402 MsG0380011697.01.T01:intron 10.0%
!!! GAAATATAATTAATTTTGTA+TGG - Chr3:3644186-3644205 MsG0380011697.01.T01:intron 10.0%
!! AAAACCTGATTTAAAAAATT+AGG - Chr3:3651325-3651344 MsG0380011697.01.T01:intron 15.0%
!! AAAATTAGGGAAAAAAATTT+AGG - Chr3:3651339-3651358 MsG0380011697.01.T01:intron 15.0%
!! AAACCTGATTTAAAAAATTA+GGG - Chr3:3651326-3651345 MsG0380011697.01.T01:intron 15.0%
!! AAATACAATAATTCATGTAA+AGG + Chr3:3644480-3644499 None:intergenic 15.0%
!! AGATATCATATTATATATTG+AGG - Chr3:3650360-3650379 MsG0380011697.01.T01:intron 15.0%
!! ATTATTGAAAGTTGTAAAAT+AGG + Chr3:3651127-3651146 None:intergenic 15.0%
!! TGAAAATAATAATTGGTTAT+AGG + Chr3:3647840-3647859 None:intergenic 15.0%
!!! AGTTTTTTGATAAAAATCAA+AGG + Chr3:3647609-3647628 None:intergenic 15.0%
!!! ATGTTTTTACTTTTCTATTT+TGG - Chr3:3650391-3650410 MsG0380011697.01.T01:intron 15.0%
!!! GTAACTTGATTTAAAATAAT+TGG + Chr3:3645233-3645252 None:intergenic 15.0%
!!! TAATTTTCTATCAATCTTTT+TGG - Chr3:3645348-3645367 MsG0380011697.01.T01:intron 15.0%
!!! TCTAAAATGTCTTATAATTT+GGG + Chr3:3644149-3644168 None:intergenic 15.0%
!!! TTTCACTTTGTTTAAAATTA+GGG + Chr3:3651579-3651598 None:intergenic 15.0%
!!! TTTTTTCAAATCCTTTATTA+AGG + Chr3:3644246-3644265 None:intergenic 15.0%
!! AAACGACATATAATTTAAGA+CGG - Chr3:3644371-3644390 MsG0380011697.01.T01:intron 20.0%
!! AAAGATAGAGAGTAATAAAT+AGG - Chr3:3644267-3644286 MsG0380011697.01.T01:intron 20.0%
!! AATAATATTCATCCTTTAGA+GGG - Chr3:3644094-3644113 MsG0380011697.01.T01:intron 20.0%
!! AATGAATTGGTTATGAATTT+AGG - Chr3:3646361-3646380 MsG0380011697.01.T01:CDS 20.0%
!! ACATGACTGAAAATAATAAT+TGG + Chr3:3647847-3647866 None:intergenic 20.0%
!! ACTAAAAAAATTATCCTTCA+TGG - Chr3:3647626-3647645 MsG0380011697.01.T01:intron 20.0%
!! ATAAAGTTCCTGAATAAATA+TGG + Chr3:3646866-3646885 None:intergenic 20.0%
!! ATAAATGTCAATATAACCAT+TGG - Chr3:3650534-3650553 MsG0380011697.01.T01:intron 20.0%
!! ATATTAATGATTTACTGGTA+TGG - Chr3:3644312-3644331 MsG0380011697.01.T01:intron 20.0%
!! ATGAAACATTTCAGATTATA+AGG - Chr3:3645056-3645075 MsG0380011697.01.T01:intron 20.0%
!! ATGAATTGGTTATGAATTTA+GGG - Chr3:3646362-3646381 MsG0380011697.01.T01:CDS 20.0%
!! ATGAATTTAGTAAGAAGATT+TGG + Chr3:3647222-3647241 None:intergenic 20.0%
!! ATGGTTATATTGACATTTAT+AGG + Chr3:3650534-3650553 None:intergenic 20.0%
!! ATTTACAACATTGATCAATT+TGG - Chr3:3648449-3648468 MsG0380011697.01.T01:intron 20.0%
!! CAATATAGTTAACTATCATT+GGG + Chr3:3650329-3650348 None:intergenic 20.0%
!! CAATTATAACTAATAGTATC+AGG + Chr3:3653069-3653088 None:intergenic 20.0%
!! GATACTATTAGTTATAATTG+CGG - Chr3:3653069-3653088 MsG0380011697.01.T01:CDS 20.0%
!! GATTTAAATTGAATAGCTTA+AGG + Chr3:3645151-3645170 None:intergenic 20.0%
!! GCATTTACCTTAAAATTAAA+AGG + Chr3:3651393-3651412 None:intergenic 20.0%
!! TAATAATATTCATCCTTTAG+AGG - Chr3:3644093-3644112 MsG0380011697.01.T01:intron 20.0%
!! TCAATATAGTTAACTATCAT+TGG + Chr3:3650330-3650349 None:intergenic 20.0%
!! TCAATGTTAATAGCATAAAA+TGG - Chr3:3651965-3651984 MsG0380011697.01.T01:intron 20.0%
!! TCACATATCAAAACTTAATA+AGG + Chr3:3644691-3644710 None:intergenic 20.0%
!! TGCAAAATTATCCTTAATAA+AGG - Chr3:3644232-3644251 MsG0380011697.01.T01:intron 20.0%
!!! AAATAACAAGGTACTAAAAA+AGG + Chr3:3648129-3648148 None:intergenic 20.0%
!!! AATTTGAATTTGCTACAATT+TGG + Chr3:3645024-3645043 None:intergenic 20.0%
!!! ACAAATGAGATACAAATTTT+TGG - Chr3:3644428-3644447 MsG0380011697.01.T01:intron 20.0%
!!! ACTTGATAAGTTCTAATTAT+TGG - Chr3:3644914-3644933 MsG0380011697.01.T01:intron 20.0%
!!! ATACTCTGAAAAAATTACAT+TGG - Chr3:3645275-3645294 MsG0380011697.01.T01:intron 20.0%
!!! ATATATCAAAGCTGAAATTT+TGG - Chr3:3651098-3651117 MsG0380011697.01.T01:intron 20.0%
!!! ATCAAGGAATTTGTTTTTTA+AGG - Chr3:3644853-3644872 MsG0380011697.01.T01:intron 20.0%
!!! ATGATTTTGGTTATGAATTT+AGG - Chr3:3649010-3649029 MsG0380011697.01.T01:intron 20.0%
!!! ATTTGACAAAGAAAAGATTT+TGG + Chr3:3647433-3647452 None:intergenic 20.0%
!!! CACATTGTTTGATTTATAAT+TGG + Chr3:3644622-3644641 None:intergenic 20.0%
!!! CATACTATTAGTTTTTATTG+AGG - Chr3:3643977-3643996 MsG0380011697.01.T01:intron 20.0%
!!! CTGATAAAGGTTTTTAAAAA+AGG + Chr3:3652450-3652469 None:intergenic 20.0%
!!! CTTTTTTAAAAACCTTTATC+AGG - Chr3:3652448-3652467 MsG0380011697.01.T01:intron 20.0%
!!! GGTTAACAAAGTTTTAAATA+AGG + Chr3:3649893-3649912 None:intergenic 20.0%
!!! GTCTAAAATGTCTTATAATT+TGG + Chr3:3644150-3644169 None:intergenic 20.0%
!!! GTTTCACTTTGTTTAAAATT+AGG + Chr3:3651580-3651599 None:intergenic 20.0%
!!! GTTTTTTAAGGAATATATCA+AGG - Chr3:3644865-3644884 MsG0380011697.01.T01:intron 20.0%
!!! TAAATAGGTAAAGGTATAAT+AGG - Chr3:3644282-3644301 MsG0380011697.01.T01:intron 20.0%
!!! TGATTTTGGTTATGAATTTA+GGG - Chr3:3649011-3649030 MsG0380011697.01.T01:intron 20.0%
!!! TTAGCACTTTTTTTTTTTTC+CGG + Chr3:3651676-3651695 None:intergenic 20.0%
!!! TTATAATCTGAAATGTTTCA+TGG + Chr3:3645057-3645076 None:intergenic 20.0%
!!! TTTAAATAAAATTGGGTTGA+GGG - Chr3:3649342-3649361 MsG0380011697.01.T01:intron 20.0%
!!! TTTACTTTTCTATTTTGGTA+GGG - Chr3:3650396-3650415 MsG0380011697.01.T01:intron 20.0%
!!! TTTCCCTAATTTTTTAAATC+AGG + Chr3:3651332-3651351 None:intergenic 20.0%
!!! TTTGATTTATAATTGGTCAT+GGG + Chr3:3644615-3644634 None:intergenic 20.0%
!!! TTTTAAATAAAATTGGGTTG+AGG - Chr3:3649341-3649360 MsG0380011697.01.T01:intron 20.0%
!!! TTTTACTTTTCTATTTTGGT+AGG - Chr3:3650395-3650414 MsG0380011697.01.T01:intron 20.0%
!!! TTTTGATATGTGATGATTTT+AGG - Chr3:3644698-3644717 MsG0380011697.01.T01:intron 20.0%
!!! TTTTTTTAATTAGGATTCCT+TGG + Chr3:3652680-3652699 None:intergenic 20.0%
! AAAAAATTTCTTAAGGATGG+CGG - Chr3:3651059-3651078 MsG0380011697.01.T01:CDS 25.0%
! AAAACTCCAAAATTGAATGA+AGG - Chr3:3651269-3651288 MsG0380011697.01.T01:intron 25.0%
! AAAGGAAAGAATAACTCTAA+GGG + Chr3:3648170-3648189 None:intergenic 25.0%
! AAAGTTTGAATTGATGCAAA+TGG + Chr3:3648504-3648523 None:intergenic 25.0%
! AAGAAGCTCAAATAATAGTT+TGG + Chr3:3643691-3643710 None:intergenic 25.0%
! ACAATTGTAAACACATTACA+AGG - Chr3:3645873-3645892 MsG0380011697.01.T01:intron 25.0%
! ACAGACTCTTAAAAAATATG+AGG + Chr3:3644510-3644529 None:intergenic 25.0%
! ACATGATCACATAAGTATTT+GGG + Chr3:3650088-3650107 None:intergenic 25.0%
! AGAGAGTAATAAATAGGTAA+AGG - Chr3:3644273-3644292 MsG0380011697.01.T01:intron 25.0%
! AGGATTAATAACTAAAGTCT+TGG + Chr3:3645756-3645775 None:intergenic 25.0%
! AGTGTTTAACAAGAAATTTG+TGG - Chr3:3644983-3645002 MsG0380011697.01.T01:intron 25.0%
! ATAAAGTTGTGAGATTCATA+TGG + Chr3:3649729-3649748 None:intergenic 25.0%
! ATAATTGAATGTTGCACAAA+AGG + Chr3:3649307-3649326 None:intergenic 25.0%
! ATAGAAATTGAGAGAAGAAA+GGG - Chr3:3649044-3649063 MsG0380011697.01.T01:intron 25.0%
! ATCTTTCAATTCTACTATGA+GGG + Chr3:3651723-3651742 None:intergenic 25.0%
! ATGAATTGGAACTTGAATTA+AGG + Chr3:3646641-3646660 None:intergenic 25.0%
! ATGTATTCGGATAAATTCAA+TGG - Chr3:3650194-3650213 MsG0380011697.01.T01:intron 25.0%
! ATTAAAGCATGCTATATAAG+AGG - Chr3:3649114-3649133 MsG0380011697.01.T01:intron 25.0%
! ATTCTTATCAAAACAAGAAG+AGG + Chr3:3648086-3648105 None:intergenic 25.0%
! ATTGTAATATGAAAAACCGA+TGG + Chr3:3645858-3645877 None:intergenic 25.0%
! CAAATTCGCTAAAAACAAAA+AGG - Chr3:3651916-3651935 MsG0380011697.01.T01:intron 25.0%
! CAGACTCTTAAAAAATATGA+GGG + Chr3:3644509-3644528 None:intergenic 25.0%
! CATAAAAAAAATCACTCATC+GGG + Chr3:3651604-3651623 None:intergenic 25.0%
! CTATTATTTGAGCTTCTTAT+TGG - Chr3:3643693-3643712 MsG0380011697.01.T01:CDS 25.0%
! CTTCAAATTTAACATACTTC+CGG - Chr3:3646964-3646983 MsG0380011697.01.T01:intron 25.0%
! CTTTGTCAAATAAATGATTG+AGG - Chr3:3647442-3647461 MsG0380011697.01.T01:intron 25.0%
! GAGAAAATCAAACATTTCAA+AGG + Chr3:3643955-3643974 None:intergenic 25.0%
! GATATATCAAACATTGGAAA+TGG + Chr3:3649759-3649778 None:intergenic 25.0%
! GCATAAAAAAAATCACTCAT+CGG + Chr3:3651605-3651624 None:intergenic 25.0%
! GCATTACTACAATATGTATT+CGG - Chr3:3650181-3650200 MsG0380011697.01.T01:intron 25.0%
! GCTAAAAAATTTCTTAAGGA+TGG - Chr3:3651056-3651075 MsG0380011697.01.T01:CDS 25.0%
! GGGTAAGTTATTTAATATCA+AGG - Chr3:3644837-3644856 MsG0380011697.01.T01:intron 25.0%
! GGTATATATTATACCCTTTA+GGG + Chr3:3646571-3646590 None:intergenic 25.0%
! GGTATATATTATACCTGTTA+GGG + Chr3:3649228-3649247 None:intergenic 25.0%
! GTGTTTAACAAGAAATTTGT+GGG - Chr3:3644984-3645003 MsG0380011697.01.T01:intron 25.0%
! TAAATTGAATAGCTTAAGGA+TGG + Chr3:3645147-3645166 None:intergenic 25.0%
! TAATTGAATGTTGCACAAAA+GGG + Chr3:3649306-3649325 None:intergenic 25.0%
! TACAGTCATAGAAAAAGTTT+AGG - Chr3:3649971-3649990 MsG0380011697.01.T01:intron 25.0%
! TACTATGAAAAAAAGGTAGA+TGG + Chr3:3647506-3647525 None:intergenic 25.0%
! TATAGAAATTGAGAGAAGAA+AGG - Chr3:3649043-3649062 MsG0380011697.01.T01:intron 25.0%
! TATCTGCTACTATGAAAAAA+AGG + Chr3:3647513-3647532 None:intergenic 25.0%
! TATCTTTCAATTCTACTATG+AGG + Chr3:3651724-3651743 None:intergenic 25.0%
! TATTAGACTATATACACGTT+GGG + Chr3:3646592-3646611 None:intergenic 25.0%
! TATTAGACTATATACCTGTT+GGG + Chr3:3649250-3649269 None:intergenic 25.0%
! TCATAGAATTCTTAGCAAAA+AGG - Chr3:3649594-3649613 MsG0380011697.01.T01:intron 25.0%
! TCTACATAAGTGTTTATAAG+TGG + Chr3:3645485-3645504 None:intergenic 25.0%
! TGAATTGGAACTTGAATTAA+GGG + Chr3:3646640-3646659 None:intergenic 25.0%
! TGTTTAACAAGAAATTTGTG+GGG - Chr3:3644985-3645004 MsG0380011697.01.T01:intron 25.0%
! TTATGAGAACTTTATCTTCA+AGG + Chr3:3648378-3648397 None:intergenic 25.0%
! TTCAGATTTATGTCACAAAA+TGG - Chr3:3646159-3646178 MsG0380011697.01.T01:intron 25.0%
! TTCTAATTCAAGCAATGAAT+TGG - Chr3:3646348-3646367 MsG0380011697.01.T01:CDS 25.0%
!! AACAAACTTTTATACCCTAA+AGG - Chr3:3646554-3646573 MsG0380011697.01.T01:intron 25.0%
!! AAGCACTTCTTTCATTTTAT+TGG + Chr3:3651645-3651664 None:intergenic 25.0%
!! AATAAAAAGTGCAATCATGT+TGG - Chr3:3650769-3650788 MsG0380011697.01.T01:intron 25.0%
!! ACAAACTTTTATACCCTAAA+GGG - Chr3:3646555-3646574 MsG0380011697.01.T01:intron 25.0%
!! ATAATATTCATCCTTTAGAG+GGG - Chr3:3644095-3644114 MsG0380011697.01.T01:intron 25.0%
!! ATATCAACTTTTGTCATATG+AGG - Chr3:3646083-3646102 MsG0380011697.01.T01:intron 25.0%
!! GTTTGATTTATAATTGGTCA+TGG + Chr3:3644616-3644635 None:intergenic 25.0%
!! TTAATAGTTCTACTTACTCT+CGG - Chr3:3651027-3651046 MsG0380011697.01.T01:CDS 25.0%
!! TTTCTACCTTCATTCAATTT+TGG + Chr3:3651278-3651297 None:intergenic 25.0%
!! TTTTCACTCTATAAAATCGA+GGG - Chr3:3652369-3652388 MsG0380011697.01.T01:intron 25.0%
!! TTTTTCACTCTATAAAATCG+AGG - Chr3:3652368-3652387 MsG0380011697.01.T01:intron 25.0%
!!! AAACTGTTTTTTTCCATTCA+TGG - Chr3:3648861-3648880 MsG0380011697.01.T01:intron 25.0%
!!! AAATAGTAAACTTGCTAGAT+TGG - Chr3:3645976-3645995 MsG0380011697.01.T01:intron 25.0%
!!! AGTGATTTTTTTTATGCAGT+AGG - Chr3:3651608-3651627 MsG0380011697.01.T01:intron 25.0%
!!! ATTACATTGGTCTCATATTT+TGG - Chr3:3645288-3645307 MsG0380011697.01.T01:intron 25.0%
!!! CATATTTTTTAAGAGTCTGT+AGG - Chr3:3644510-3644529 MsG0380011697.01.T01:intron 25.0%
!!! GATTGAGGTTTCTAAAATTT+AGG - Chr3:3647457-3647476 MsG0380011697.01.T01:intron 25.0%
!!! GTTAAACACTCTAAAATTGA+AGG + Chr3:3644973-3644992 None:intergenic 25.0%
!!! TTACTTTTCTATTTTGGTAG+GGG - Chr3:3650397-3650416 MsG0380011697.01.T01:intron 25.0%
!!! TTAGTTTTGTGATTTTACCA+TGG - Chr3:3645414-3645433 MsG0380011697.01.T01:intron 25.0%
!!! TTCAAGGTTTGATTTTATTG+TGG + Chr3:3648362-3648381 None:intergenic 25.0%
!!! TTTAGCTCTTAAACATCATA+TGG + Chr3:3652475-3652494 None:intergenic 25.0%
!!! TTTCTATCAATCTTTTTGGT+TGG - Chr3:3645352-3645371 MsG0380011697.01.T01:intron 25.0%
AAAAACGGTTATGATGAGTT+GGG + Chr3:3648743-3648762 None:intergenic 30.0%
AAAAATTTCTTAAGGATGGC+GGG - Chr3:3651060-3651079 MsG0380011697.01.T01:CDS 30.0%
AAACATAATTCAAATCCGCT+CGG + Chr3:3649417-3649436 None:intergenic 30.0%
AAAGAGAAAAACGAGTTAGA+GGG - Chr3:3652234-3652253 MsG0380011697.01.T01:intron 30.0%
AAAGGTTCTATTCTTTGCAA+GGG - Chr3:3647567-3647586 MsG0380011697.01.T01:intron 30.0%
AACACTTGAAAATGGAAACT+AGG + Chr3:3648826-3648845 None:intergenic 30.0%
AACTTTCATATCAGTCTGAA+AGG - Chr3:3647549-3647568 MsG0380011697.01.T01:intron 30.0%
AAGAGATGGATATACAGAAT+GGG - Chr3:3649542-3649561 MsG0380011697.01.T01:intron 30.0%
AATATGCCAAATACTTTCTG+GGG + Chr3:3646944-3646963 None:intergenic 30.0%
AATCAATGTCTAGAAACGTT+GGG + Chr3:3648894-3648913 None:intergenic 30.0%
AATTGTCAACAAAGATCTCT+TGG - Chr3:3643822-3643841 MsG0380011697.01.T01:CDS 30.0%
ACACTTGAAAATGGAAACTA+GGG + Chr3:3648825-3648844 None:intergenic 30.0%
ACTAAGGCAATAAGATTGAA+AGG + Chr3:3646692-3646711 None:intergenic 30.0%
ACTTGATTGGAATGATGAAT+TGG + Chr3:3646655-3646674 None:intergenic 30.0%
AGAATATGCCAAATACTTTC+TGG + Chr3:3646946-3646965 None:intergenic 30.0%
AGATTATCAAGGCACAAATT+GGG - Chr3:3645821-3645840 MsG0380011697.01.T01:intron 30.0%
AGTCATAGAAAAAGTTTAGG+AGG - Chr3:3649974-3649993 MsG0380011697.01.T01:intron 30.0%
AGTCTTAGTAGAAAGAAAAG+TGG + Chr3:3647148-3647167 None:intergenic 30.0%
AGTTAGGATGATTGTATTAG+TGG + Chr3:3644055-3644074 None:intergenic 30.0%
AGTTCCTGAATAAATATGGA+TGG + Chr3:3646862-3646881 None:intergenic 30.0%
ATAATCTTCCCTTCAATCAA+TGG + Chr3:3652548-3652567 None:intergenic 30.0%
ATCCTTAACATATGCTCTTA+GGG - Chr3:3651538-3651557 MsG0380011697.01.T01:intron 30.0%
ATCTACACTTTGTTGAATGA+AGG - Chr3:3648641-3648660 MsG0380011697.01.T01:intron 30.0%
ATGAAATCGCCATAAAAAAG+CGG - Chr3:3652915-3652934 MsG0380011697.01.T01:intron 30.0%
ATGATGTTTAAGAGCTAAAC+AGG - Chr3:3652476-3652495 MsG0380011697.01.T01:intron 30.0%
ATTAGACTATATACCTGTTG+GGG + Chr3:3649249-3649268 None:intergenic 30.0%
ATTCAACAAAGTGTAGATTC+AGG + Chr3:3648639-3648658 None:intergenic 30.0%
ATTGAAAGGTTCAACAAGTT+AGG + Chr3:3646678-3646697 None:intergenic 30.0%
CAACATTCTTTACAGTAAAG+AGG - Chr3:3645518-3645537 MsG0380011697.01.T01:intron 30.0%
CAATGTTTGATATATCCACA+TGG - Chr3:3649763-3649782 MsG0380011697.01.T01:intron 30.0%
CATGTGGATATATCAAACAT+TGG + Chr3:3649765-3649784 None:intergenic 30.0%
CGGAGCTAAAAAATTTCTTA+AGG - Chr3:3651052-3651071 MsG0380011697.01.T01:CDS 30.0%
CTATAAGATTTGAGAACTGA+TGG + Chr3:3647121-3647140 None:intergenic 30.0%
CTCTTTACTGTAAAGAATGT+TGG + Chr3:3645520-3645539 None:intergenic 30.0%
GAAAGATGGTTCTTAAATAC+TGG + Chr3:3647881-3647900 None:intergenic 30.0%
GAAAGGAAAGAATAACTCTA+AGG + Chr3:3648171-3648190 None:intergenic 30.0%
GAAATAGAACATTGTTTGAC+AGG + Chr3:3646991-3647010 None:intergenic 30.0%
GAATATGCCAAATACTTTCT+GGG + Chr3:3646945-3646964 None:intergenic 30.0%
GAATTACAAACAACTCTCAA+TGG - Chr3:3652886-3652905 MsG0380011697.01.T01:intron 30.0%
GAATTGGAACTTGAATTAAG+GGG + Chr3:3646639-3646658 None:intergenic 30.0%
GACATGATCACATAAGTATT+TGG + Chr3:3650089-3650108 None:intergenic 30.0%
GATAAGAAGAACTTCAAGAA+AGG + Chr3:3648188-3648207 None:intergenic 30.0%
GGGAAAAAGATATTATGAGT+TGG - Chr3:3644207-3644226 MsG0380011697.01.T01:intron 30.0%
GGGTATATATTATACCCTTT+AGG + Chr3:3646572-3646591 None:intergenic 30.0%
GGGTATATATTATACCTGTT+AGG + Chr3:3649229-3649248 None:intergenic 30.0%
GTAGATTTCTGAATGATTTG+TGG - Chr3:3646107-3646126 MsG0380011697.01.T01:intron 30.0%
GTAGTTAGATTAGATGAGTT+AGG + Chr3:3644071-3644090 None:intergenic 30.0%
GTATTAGACTATATACACGT+TGG + Chr3:3646593-3646612 None:intergenic 30.0%
GTATTAGACTATATACCTGT+TGG + Chr3:3649251-3649270 None:intergenic 30.0%
GTGAATAAGCCTCTTATATA+AGG + Chr3:3646469-3646488 None:intergenic 30.0%
GTTCCTGAATAAATATGGAT+GGG + Chr3:3646861-3646880 None:intergenic 30.0%
GTTCTTAACATTCTGTCTAA+GGG + Chr3:3649655-3649674 None:intergenic 30.0%
TAATCAATGTCTAGAAACGT+TGG + Chr3:3648895-3648914 None:intergenic 30.0%
TAATCTTCCCTTCAATCAAT+GGG + Chr3:3652547-3652566 None:intergenic 30.0%
TACAACATGCCTTATATAAG+AGG - Chr3:3646457-3646476 MsG0380011697.01.T01:CDS 30.0%
TAGAAATTGAGAGAAGAAAG+GGG - Chr3:3649045-3649064 MsG0380011697.01.T01:intron 30.0%
TATTGTAGTAATGCACATCA+AGG + Chr3:3650175-3650194 None:intergenic 30.0%
TGAAGAATTGCAAAGTTCTT+TGG + Chr3:3648299-3648318 None:intergenic 30.0%
TGAGAGTTGTTTGTAATTCT+TGG + Chr3:3652885-3652904 None:intergenic 30.0%
TGTAAATCAGATGAATCTTG+TGG + Chr3:3648436-3648455 None:intergenic 30.0%
TGTTCTTAACATTCTGTCTA+AGG + Chr3:3649656-3649675 None:intergenic 30.0%
TGTTGGAAATTGTGCAAAAA+CGG + Chr3:3648758-3648777 None:intergenic 30.0%
TTAGATTTGAATGCAGCTTT+AGG - Chr3:3647349-3647368 MsG0380011697.01.T01:CDS 30.0%
TTGATTGAAGGGAAGATTAT+TGG - Chr3:3652548-3652567 MsG0380011697.01.T01:intron 30.0%
TTGCAATTCTTCAATCTTCA+AGG - Chr3:3648306-3648325 MsG0380011697.01.T01:intron 30.0%
TTGGATATAGTCATATGTGT+AGG + Chr3:3652004-3652023 None:intergenic 30.0%
TTTAGCGAATTTGCATTGTA+TGG + Chr3:3651909-3651928 None:intergenic 30.0%
! AATGATGAAGAACTTGTTTG+TGG + Chr3:3648790-3648809 None:intergenic 30.0%
! AATGTCTTATAATTTGGGAC+TGG + Chr3:3644144-3644163 None:intergenic 30.0%
! ACAAACTTTTATACCCTAAC+AGG - Chr3:3649212-3649231 MsG0380011697.01.T01:intron 30.0%
! ATGTCTTATAATTTGGGACT+GGG + Chr3:3644143-3644162 None:intergenic 30.0%
! ATTCGAATCAAAGCATCAAA+TGG - Chr3:3645100-3645119 MsG0380011697.01.T01:intron 30.0%
! CAACATTTGAAAGCGATTTT+GGG + Chr3:3646052-3646071 None:intergenic 30.0%
! CAATTGGTGATTGAGAAATT+AGG + Chr3:3652748-3652767 None:intergenic 30.0%
! CGAATATTTCATCAGTTTTG+TGG + Chr3:3647245-3647264 None:intergenic 30.0%
! CTAATATTCGCTCTTTTGTT+GGG + Chr3:3645669-3645688 None:intergenic 30.0%
! CTGCAACATACATTTTGAAT+AGG + Chr3:3646907-3646926 None:intergenic 30.0%
! GAAATGGATTCTACATAAAG+TGG - Chr3:3645624-3645643 MsG0380011697.01.T01:intron 30.0%
! GACATATAATTTAAGACGGA+GGG - Chr3:3644375-3644394 MsG0380011697.01.T01:intron 30.0%
! GTTGTGGTGTTTTATAGTAA+CGG + Chr3:3652626-3652645 None:intergenic 30.0%
! TAAAGAAATCAGTTTCGAGT+AGG + Chr3:3649926-3649945 None:intergenic 30.0%
! TAATAGTTCTACTTACTCTC+GGG - Chr3:3651028-3651047 MsG0380011697.01.T01:CDS 30.0%
! TCATGAACAACGTTTTCTTT+TGG - Chr3:3652299-3652318 MsG0380011697.01.T01:intron 30.0%
! TCTAATATTCGCTCTTTTGT+TGG + Chr3:3645670-3645689 None:intergenic 30.0%
! TCTAATGCAAGCAATGATTT+TGG - Chr3:3648997-3649016 MsG0380011697.01.T01:intron 30.0%
! TTATAACTTGCAGTAAGCAT+GGG - Chr3:3649454-3649473 MsG0380011697.01.T01:intron 30.0%
! TTGGTAATACTTGCTTGATA+GGG + Chr3:3647381-3647400 None:intergenic 30.0%
! TTTATAACTTGCAGTAAGCA+TGG - Chr3:3649453-3649472 MsG0380011697.01.T01:intron 30.0%
! TTTCGAGTAGGTAATTCATT+TGG + Chr3:3649914-3649933 None:intergenic 30.0%
! TTTTGCTTTCAAAAGTTGCT+TGG - Chr3:3653026-3653045 MsG0380011697.01.T01:intron 30.0%
!! AAGAGGTTTTGATAAGAAGA+AGG + Chr3:3648069-3648088 None:intergenic 30.0%
!! AAGCTCTAAAATTGAGTGAA+TGG + Chr3:3651152-3651171 None:intergenic 30.0%
!! AAGGTTTGATTTTATTGTGG+TGG + Chr3:3648359-3648378 None:intergenic 30.0%
!! AAGTTTGTTGCAAGATAGTT+AGG + Chr3:3646543-3646562 None:intergenic 30.0%
!! ACGTTTTCTTTTGGTAGTAA+CGG - Chr3:3652308-3652327 MsG0380011697.01.T01:intron 30.0%
!! ATGCTTTGATTCGAATTTTG+AGG + Chr3:3645096-3645115 None:intergenic 30.0%
!! CACATCTTTTGATTCTTGTA+TGG - Chr3:3648333-3648352 MsG0380011697.01.T01:intron 30.0%
!! GATATGTGATGATTTTAGGA+TGG - Chr3:3644702-3644721 MsG0380011697.01.T01:intron 30.0%
!! TGCTTTGATTCGAATTTTGA+GGG + Chr3:3645095-3645114 None:intergenic 30.0%
!! TTCTTCTTTTAGCTAATCCA+TGG - Chr3:3647008-3647027 MsG0380011697.01.T01:intron 30.0%
!!! AAAATGGTTTTGAGCATAGT+GGG - Chr3:3649517-3649536 MsG0380011697.01.T01:intron 30.0%
!!! TAGTTTCCATTTTCAAGTGT+TGG - Chr3:3648825-3648844 MsG0380011697.01.T01:intron 30.0%
!!! TCAAATGCTCTTAGTTTTGT+AGG - Chr3:3650287-3650306 MsG0380011697.01.T01:intron 30.0%
AAAATGGAAACTAGGGAAGA+TGG + Chr3:3648818-3648837 None:intergenic 35.0%
AAAGATCCCCCAACAAATTT+AGG + Chr3:3646237-3646256 None:intergenic 35.0%
AACAATTGTTCCTTGTTCCT+TGG - Chr3:3652716-3652735 MsG0380011697.01.T01:intron 35.0%
AACACAAAGTTGTGAAACAG+AGG - Chr3:3651297-3651316 MsG0380011697.01.T01:intron 35.0%
AACAGAAGAAGAAGAAGAGA+AGG + Chr3:3648682-3648701 None:intergenic 35.0%
AAGAGAAAAACGAGTTAGAG+GGG - Chr3:3652235-3652254 MsG0380011697.01.T01:intron 35.0%
AAGCTGTGAATTTAGGAAAC+TGG - Chr3:3643758-3643777 MsG0380011697.01.T01:CDS 35.0%
AAGTGTACTTGAGACTGTAA+TGG + Chr3:3650627-3650646 None:intergenic 35.0%
AATACACATCCATTTGTGCT+TGG + Chr3:3650482-3650501 None:intergenic 35.0%
AATCTTCCCTTCAATCAATG+GGG + Chr3:3652546-3652565 None:intergenic 35.0%
ACAGAGTTTCAGCTTCATAT+GGG + Chr3:3650976-3650995 None:intergenic 35.0%
ACATCATATGGTCCTGATAA+AGG + Chr3:3652463-3652482 None:intergenic 35.0%
ACTATCTTCTGAATGTGGTA+TGG + Chr3:3648017-3648036 None:intergenic 35.0%
AGAAGCTTTCCTTAAAGGAT+TGG - Chr3:3652945-3652964 MsG0380011697.01.T01:intron 35.0%
AGAGATGCAATTCAGAAAGA+TGG + Chr3:3647895-3647914 None:intergenic 35.0%
AGAGATGGATATACAGAATG+GGG - Chr3:3649543-3649562 MsG0380011697.01.T01:intron 35.0%
ATAGAGTGAAAAAGATCACG+AGG + Chr3:3652361-3652380 None:intergenic 35.0%
ATAGCCTGAAGAACTATTAC+AGG - Chr3:3650035-3650054 MsG0380011697.01.T01:intron 35.0%
ATGGAAACTCATGGTCAAAA+AGG - Chr3:3645433-3645452 MsG0380011697.01.T01:intron 35.0%
ATTCTCATGCAACATTGGAT+GGG - Chr3:3650499-3650518 MsG0380011697.01.T01:intron 35.0%
CAAAAACGGTTATGATGAGT+TGG + Chr3:3648744-3648763 None:intergenic 35.0%
CAAGAGATGGATATACAGAA+TGG - Chr3:3649541-3649560 MsG0380011697.01.T01:intron 35.0%
CAAGTATTACCAACCTGATT+TGG - Chr3:3647388-3647407 MsG0380011697.01.T01:CDS 35.0%
CACAAAGGAATTCCATTTGA+CGG + Chr3:3653170-3653189 None:intergenic 35.0%
CAGATTATCAAGGCACAAAT+TGG - Chr3:3645820-3645839 MsG0380011697.01.T01:intron 35.0%
CATCTTCCAACACTTGAAAA+TGG + Chr3:3648834-3648853 None:intergenic 35.0%
CCTTCACACATATATGATCA+AGG + Chr3:3645776-3645795 None:intergenic 35.0%
CCTTGATCATATATGTGTGA+AGG - Chr3:3645773-3645792 MsG0380011697.01.T01:intron 35.0%
CGTTGTTTGTCTTTCATGTT+TGG + Chr3:3652114-3652133 None:intergenic 35.0%
CTAGGGAACAAGTAAACAAA+GGG + Chr3:3646763-3646782 None:intergenic 35.0%
CTCAAAATCCACAAAGTCTA+AGG + Chr3:3648601-3648620 None:intergenic 35.0%
CTCTATAAAATCGAGGGAAA+CGG - Chr3:3652375-3652394 MsG0380011697.01.T01:intron 35.0%
CTGAATAAATATGGATGGGA+AGG + Chr3:3646857-3646876 None:intergenic 35.0%
CTGATGCTAAAAGAAAGCTA+GGG + Chr3:3646780-3646799 None:intergenic 35.0%
CTGGTCAAAAGGAAATAACA+AGG + Chr3:3648141-3648160 None:intergenic 35.0%
CTTATTGAGTGAAATCCATG+TGG + Chr3:3649781-3649800 None:intergenic 35.0%
CTTCCCATCCATATTTATTC+AGG - Chr3:3646855-3646874 MsG0380011697.01.T01:intron 35.0%
CTTCTTCTCTCATTTGTCAA+AGG - Chr3:3650134-3650153 MsG0380011697.01.T01:intron 35.0%
GAAAGAGAAAAACGAGTTAG+AGG - Chr3:3652233-3652252 MsG0380011697.01.T01:intron 35.0%
GAAAGGTTCTATTCTTTGCA+AGG - Chr3:3647566-3647585 MsG0380011697.01.T01:intron 35.0%
GAGAAATTAGGATCAAACCA+AGG + Chr3:3652736-3652755 None:intergenic 35.0%
GATAGCTATGAAGGAAAGAA+CGG + Chr3:3647746-3647765 None:intergenic 35.0%
GATCCTTAACATATGCTCTT+AGG - Chr3:3651537-3651556 MsG0380011697.01.T01:intron 35.0%
GATTATTGCACATAGCCAAT+TGG - Chr3:3645374-3645393 MsG0380011697.01.T01:intron 35.0%
GATTTCACTCAATAAGAGAG+TGG - Chr3:3649785-3649804 MsG0380011697.01.T01:intron 35.0%
GCTTACAAAGCTGTGAATTT+AGG - Chr3:3643751-3643770 MsG0380011697.01.T01:CDS 35.0%
GGGATTTGAAGATTGTTCAT+TGG + Chr3:3646742-3646761 None:intergenic 35.0%
GGTATAATATATACCCCAAC+AGG - Chr3:3649233-3649252 MsG0380011697.01.T01:intron 35.0%
GTAGTGTATTCTGATGTATG+TGG + Chr3:3647298-3647317 None:intergenic 35.0%
GTATCATGAAGGTGATGTTT+AGG + Chr3:3648558-3648577 None:intergenic 35.0%
TAAGATTTGAGAACTGATGG+TGG + Chr3:3647118-3647137 None:intergenic 35.0%
TACCAACTTACTAATGGTCA+TGG - Chr3:3645900-3645919 MsG0380011697.01.T01:intron 35.0%
TAGCCTGAAGAACTATTACA+GGG - Chr3:3650036-3650055 MsG0380011697.01.T01:intron 35.0%
TAGGACAAAAAGTTTGCCAT+GGG - Chr3:3644529-3644548 MsG0380011697.01.T01:intron 35.0%
TAGGGAACAAGTAAACAAAG+GGG + Chr3:3646762-3646781 None:intergenic 35.0%
TATTCTCATGCAACATTGGA+TGG - Chr3:3650498-3650517 MsG0380011697.01.T01:intron 35.0%
TCAACAAGTTAGGACTTGAT+TGG + Chr3:3646668-3646687 None:intergenic 35.0%
TCAGCTTCATATGGGAAATA+AGG + Chr3:3650968-3650987 None:intergenic 35.0%
TGAAATGTTTCATGGTTGCT+AGG + Chr3:3645049-3645068 None:intergenic 35.0%
TGAGTCTCACACTTAAGAAA+TGG - Chr3:3645608-3645627 MsG0380011697.01.T01:intron 35.0%
TGGTTATAGGAATTGATCCT+GGG + Chr3:3647827-3647846 None:intergenic 35.0%
TGTGATCATGTCAAATCCAT+TGG - Chr3:3650097-3650116 MsG0380011697.01.T01:intron 35.0%
TGTGTATTCTCATGCAACAT+TGG - Chr3:3650494-3650513 MsG0380011697.01.T01:intron 35.0%
TTCTGAATGTGGTATGGTAA+GGG + Chr3:3648011-3648030 None:intergenic 35.0%
TTCTGACACAGTTCAATTGA+TGG + Chr3:3647936-3647955 None:intergenic 35.0%
TTGACATTTATAGGCCCAAT+AGG + Chr3:3650525-3650544 None:intergenic 35.0%
TTGGTTATAGGAATTGATCC+TGG + Chr3:3647828-3647847 None:intergenic 35.0%
TTGTCACTATCTTCTGAATG+TGG + Chr3:3648022-3648041 None:intergenic 35.0%
TTTATAATTGGTCATGGGAC+TGG + Chr3:3644610-3644629 None:intergenic 35.0%
TTTCTTACTCGCATAACTTG+AGG + Chr3:3645936-3645955 None:intergenic 35.0%
TTTGTGATTTCGTCGTCTTA+GGG + Chr3:3652168-3652187 None:intergenic 35.0%
! AACTTGAAGTGCTTGTTGAA+TGG - Chr3:3648232-3648251 MsG0380011697.01.T01:intron 35.0%
! AAGAGTGTGTTTGGTTTCAT+AGG + Chr3:3652650-3652669 None:intergenic 35.0%
! AATTAGGATTCCTTGGTTTG+AGG + Chr3:3652673-3652692 None:intergenic 35.0%
! CAAACCCACCTAAATTTGTT+GGG - Chr3:3646226-3646245 MsG0380011697.01.T01:intron 35.0%
! CATCAAATGGTCTATTTTGC+GGG - Chr3:3645113-3645132 MsG0380011697.01.T01:intron 35.0%
! CGACATATAATTTAAGACGG+AGG - Chr3:3644374-3644393 MsG0380011697.01.T01:intron 35.0%
! GAGAAGAAGTTTAGAATCTG+TGG + Chr3:3650123-3650142 None:intergenic 35.0%
! GATTTTACCATGGAAACTCA+TGG - Chr3:3645424-3645443 MsG0380011697.01.T01:intron 35.0%
! GCAACATTTGAAAGCGATTT+TGG + Chr3:3646053-3646072 None:intergenic 35.0%
! GCAATCATGTTGGTTATGTA+AGG - Chr3:3650779-3650798 MsG0380011697.01.T01:intron 35.0%
! GCATCAAATGGTCTATTTTG+CGG - Chr3:3645112-3645131 MsG0380011697.01.T01:intron 35.0%
! TAAGTTGGATACACCAAATC+AGG + Chr3:3647404-3647423 None:intergenic 35.0%
! TGGTGGAGATTTTACTTCAA+AGG + Chr3:3647098-3647117 None:intergenic 35.0%
! TTGAACTTTGTTTGCTTTGC+AGG - Chr3:3646013-3646032 MsG0380011697.01.T01:intron 35.0%
! TTTAGGGTTTGAAATGAGAG+AGG - Chr3:3646378-3646397 MsG0380011697.01.T01:CDS 35.0%
! TTTTCTGTGCCAATCCTTTA+AGG + Chr3:3652957-3652976 None:intergenic 35.0%
! TTTTGTGATTTCGTCGTCTT+AGG + Chr3:3652169-3652188 None:intergenic 35.0%
! TTTTTGACCATGAGTTTCCA+TGG + Chr3:3645434-3645453 None:intergenic 35.0%
!! AAACCCACCTAAATTTGTTG+GGG - Chr3:3646227-3646246 MsG0380011697.01.T01:intron 35.0%
!! AAGAAGTGCTTGAAACAAAC+CGG - Chr3:3651654-3651673 MsG0380011697.01.T01:intron 35.0%
!! ACATAAAGCTCTAGATGCAA+GGG - Chr3:3650585-3650604 MsG0380011697.01.T01:intron 35.0%
!! CAAAATGGATTAGATGCTGT+CGG - Chr3:3646174-3646193 MsG0380011697.01.T01:intron 35.0%
!! GCTTTGATTCGAATTTTGAG+GGG + Chr3:3645094-3645113 None:intergenic 35.0%
!! GTTCTTGAAAGGTATCATGA+AGG + Chr3:3648569-3648588 None:intergenic 35.0%
!! GTTGGTAATACTTGCTTGAT+AGG + Chr3:3647382-3647401 None:intergenic 35.0%
!! TAAATTTGTTGGGGGATCTT+TGG - Chr3:3646236-3646255 MsG0380011697.01.T01:intron 35.0%
!! TACATAAAGCTCTAGATGCA+AGG - Chr3:3650584-3650603 MsG0380011697.01.T01:intron 35.0%
!! TGATTTGGTGTATCCAACTT+AGG - Chr3:3647403-3647422 MsG0380011697.01.T01:CDS 35.0%
!! TTTTAGCTAATCCATGGTTG+TGG - Chr3:3647014-3647033 MsG0380011697.01.T01:intron 35.0%
!!! AGATTTTGGAGTACCTAAGT+TGG + Chr3:3647419-3647438 None:intergenic 35.0%
!!! CAAAATGGTTTTGAGCATAG+TGG - Chr3:3649516-3649535 MsG0380011697.01.T01:intron 35.0%
!!! TTTTCTATTTTGGTAGGGGA+TGG - Chr3:3650401-3650420 MsG0380011697.01.T01:intron 35.0%
AAACGAGTGGAAGATGTCAA+GGG + Chr3:3650881-3650900 None:intergenic 40.0%
AACTACTTTGTCCCCTCTAA+AGG + Chr3:3644109-3644128 None:intergenic 40.0%
ACATAAGAAATGACAGAGCC+TGG - Chr3:3650243-3650262 MsG0380011697.01.T01:intron 40.0%
ACATATCTTTCCGCTGAAGA+TGG - Chr3:3644759-3644778 MsG0380011697.01.T01:intron 40.0%
ACGACGTCAAAGTCATTGAT+TGG - Chr3:3652062-3652081 MsG0380011697.01.T01:intron 40.0%
AGAAAGTTGCACGGATACTA+GGG - Chr3:3647687-3647706 MsG0380011697.01.T01:intron 40.0%
AGAACATTGTTTGACAGGAC+CGG + Chr3:3646986-3647005 None:intergenic 40.0%
AGGAATGTGCTTGTAGAACA+AGG - Chr3:3646798-3646817 MsG0380011697.01.T01:intron 40.0%
ATAACCATTGGAGTCTCAAG+TGG - Chr3:3650546-3650565 MsG0380011697.01.T01:intron 40.0%
ATATCTTTCCGCTGAAGATG+GGG - Chr3:3644761-3644780 MsG0380011697.01.T01:intron 40.0%
ATCCCCCAACAAATTTAGGT+GGG + Chr3:3646233-3646252 None:intergenic 40.0%
ATTGCACTATCGCATAGAGT+AGG + Chr3:3653111-3653130 None:intergenic 40.0%
ATTGCAGCAAATGCAAGACT+TGG - Chr3:3652764-3652783 MsG0380011697.01.T01:intron 40.0%
CATAAGAAATGACAGAGCCT+GGG - Chr3:3650244-3650263 MsG0380011697.01.T01:intron 40.0%
CATAGAACACTAGTTGCAGA+AGG + Chr3:3647778-3647797 None:intergenic 40.0%
CATATCTTTCCGCTGAAGAT+GGG - Chr3:3644760-3644779 MsG0380011697.01.T01:intron 40.0%
CATGGGAAAGATAGCTATGA+AGG + Chr3:3647755-3647774 None:intergenic 40.0%
CCAAACCCACCTAAATTTGT+TGG - Chr3:3646225-3646244 MsG0380011697.01.T01:intron 40.0%
CCAACAGTTAGAAAGTTGCA+CGG - Chr3:3647678-3647697 MsG0380011697.01.T01:intron 40.0%
CCATTGGAGGTTTCTTCTTT+CGG + Chr3:3647274-3647293 None:intergenic 40.0%
CCTGATGCTAAAAGAAAGCT+AGG + Chr3:3646781-3646800 None:intergenic 40.0%
CGAGAGTGAGTGTTAGAAAA+AGG + Chr3:3649693-3649712 None:intergenic 40.0%
CTATCTAGATTGACACCTAG+TGG + Chr3:3650019-3650038 None:intergenic 40.0%
CTTCCCTGTAATAGTTCTTC+AGG + Chr3:3650042-3650061 None:intergenic 40.0%
CTTCTGAATGTGGTATGGTA+AGG + Chr3:3648012-3648031 None:intergenic 40.0%
GAAGGAGAAGCTTTCCTTAA+AGG - Chr3:3652940-3652959 MsG0380011697.01.T01:intron 40.0%
GACAGAGTTTCAGCTTCATA+TGG + Chr3:3650977-3650996 None:intergenic 40.0%
GAGATATGTCCAAGCACAAA+TGG - Chr3:3650470-3650489 MsG0380011697.01.T01:intron 40.0%
GCAGTTGAAGGTTCTCAAAA+TGG - Chr3:3649501-3649520 MsG0380011697.01.T01:intron 40.0%
GCATTGTTGCGCTATCAAAT+CGG + Chr3:3648972-3648991 None:intergenic 40.0%
GCTAGGGAACAAGTAAACAA+AGG + Chr3:3646764-3646783 None:intergenic 40.0%
GGTCAAAAAGGTCAAACCAA+CGG - Chr3:3645445-3645464 MsG0380011697.01.T01:intron 40.0%
GTAGATGGCTATGACACTAT+AGG + Chr3:3647491-3647510 None:intergenic 40.0%
GTAGGACAAAAAGTTTGCCA+TGG - Chr3:3644528-3644547 MsG0380011697.01.T01:intron 40.0%
GTCAAAAAGGTCAAACCAAC+GGG - Chr3:3645446-3645465 MsG0380011697.01.T01:intron 40.0%
GTGATCGATTGTGTTGAGAT+TGG + Chr3:3651220-3651239 None:intergenic 40.0%
GTTGGTCAATTAGTGCAGAA+GGG + Chr3:3647663-3647682 None:intergenic 40.0%
GTTTGTGGCACAAGATTTGT+TGG + Chr3:3648775-3648794 None:intergenic 40.0%
TAACAAGAAATTTGTGGGGC+AGG - Chr3:3644989-3645008 MsG0380011697.01.T01:intron 40.0%
TAAGCAAACGAAAGAGAGTG+AGG + Chr3:3643736-3643755 None:intergenic 40.0%
TACTCTATGCGATAGTGCAA+TGG - Chr3:3653110-3653129 MsG0380011697.01.T01:CDS 40.0%
TACTGCTCTTAACCGTCAAA+TGG - Chr3:3653155-3653174 MsG0380011697.01.T01:CDS 40.0%
TAGAAAGTTGCACGGATACT+AGG - Chr3:3647686-3647705 MsG0380011697.01.T01:intron 40.0%
TAGGATCAAACCAAGGAACA+AGG + Chr3:3652729-3652748 None:intergenic 40.0%
TCAGTGACTGCAGATTATCA+AGG - Chr3:3645810-3645829 MsG0380011697.01.T01:intron 40.0%
TCTTTAACATGTGCCCTTGA+GGG + Chr3:3651425-3651444 None:intergenic 40.0%
TGCCATGACCATTAGTAAGT+TGG + Chr3:3645905-3645924 None:intergenic 40.0%
TGGCTATGACACTATAGGTT+TGG + Chr3:3647486-3647505 None:intergenic 40.0%
TGTTCCTAGCATTCTGTCTA+AGG + Chr3:3649838-3649857 None:intergenic 40.0%
TGTTGGTCAATTAGTGCAGA+AGG + Chr3:3647664-3647683 None:intergenic 40.0%
TTACTACAATAGTCACCGAG+CGG - Chr3:3649399-3649418 MsG0380011697.01.T01:intron 40.0%
TTCTGATGTATGTGGTCCAT+TGG + Chr3:3647290-3647309 None:intergenic 40.0%
TTCTTTAACATGTGCCCTTG+AGG + Chr3:3651426-3651445 None:intergenic 40.0%
TTGGAACTTGAATTAAGGGG+AGG + Chr3:3646636-3646655 None:intergenic 40.0%
TTGGATACACCAAATCAGGT+TGG + Chr3:3647400-3647419 None:intergenic 40.0%
TTGGGATGACAATGATCCAT+CGG - Chr3:3645839-3645858 MsG0380011697.01.T01:intron 40.0%
TTTGGAAGCTCATGAACTGA+TGG + Chr3:3648281-3648300 None:intergenic 40.0%
TTTGTCTCTCACTAAACCCA+TGG + Chr3:3644548-3644567 None:intergenic 40.0%
TTTGTGCTTGGACATATCTC+TGG + Chr3:3650470-3650489 None:intergenic 40.0%
! ACATGAGTATTCTGGAGACT+TGG + Chr3:3652023-3652042 None:intergenic 40.0%
! AGAACAAGCTAAACTTGCTC+AGG + Chr3:3647969-3647988 None:intergenic 40.0%
! AGTCTTGCATTTGCTGCAAT+TGG + Chr3:3652764-3652783 None:intergenic 40.0%
! AGTTTAGAATCTGTGGCCAA+TGG + Chr3:3650116-3650135 None:intergenic 40.0%
! ATAACTCTAAGGGAGGATAC+TGG + Chr3:3648160-3648179 None:intergenic 40.0%
! CATTTGAAAGCGATTTTGGG+TGG + Chr3:3646049-3646068 None:intergenic 40.0%
! CCAACAAATTTAGGTGGGTT+TGG + Chr3:3646228-3646247 None:intergenic 40.0%
! CTTAACTTTTGCATTCTCCC+AGG - Chr3:3647807-3647826 MsG0380011697.01.T01:intron 40.0%
! GGAAAGAATAACTCTAAGGG+AGG + Chr3:3648167-3648186 None:intergenic 40.0%
! GTTTGGTTTCATAGGTGTTG+TGG + Chr3:3652642-3652661 None:intergenic 40.0%
! TCTTTGCAAGGGAAGTTTTC+AGG - Chr3:3647578-3647597 MsG0380011697.01.T01:intron 40.0%
! TGCCCTAAGAGCATATGTTA+AGG + Chr3:3651543-3651562 None:intergenic 40.0%
! TTCTGGTTGGGAAACATTCA+GGG - Chr3:3644817-3644836 MsG0380011697.01.T01:intron 40.0%
!! AACCCACCTAAATTTGTTGG+GGG - Chr3:3646228-3646247 MsG0380011697.01.T01:intron 40.0%
!! CATAAAGCTCTAGATGCAAG+GGG - Chr3:3650586-3650605 MsG0380011697.01.T01:intron 40.0%
!! CCTAGCTTTCTTTTAGCATC+AGG - Chr3:3646778-3646797 MsG0380011697.01.T01:intron 40.0%
!! CTACCAATAACTTGTTGTCG+CGG - Chr3:3652407-3652426 MsG0380011697.01.T01:intron 40.0%
!! GGAGAGTACCAACTTACTAA+TGG - Chr3:3645894-3645913 MsG0380011697.01.T01:intron 40.0%
!! TAGAGTCGTTTTGATGAGCA+TGG + Chr3:3650914-3650933 None:intergenic 40.0%
!! TATTGGCTCATTTGCAGCTT+TGG - Chr3:3644931-3644950 MsG0380011697.01.T01:intron 40.0%
!! TGAGAGTTTTTGAGCAGCAA+AGG - Chr3:3650687-3650706 MsG0380011697.01.T01:intron 40.0%
!! TTTGTAATTCTTGGCTTGCG+CGG + Chr3:3652876-3652895 None:intergenic 40.0%
AAATCGGTATCCAGAGCTTC+TGG + Chr3:3648956-3648975 None:intergenic 45.0%
AACACTAGTTGCAGAAGGCA+TGG + Chr3:3647773-3647792 None:intergenic 45.0%
AAGGGAGGATACTGGTCAAA+AGG + Chr3:3648152-3648171 None:intergenic 45.0%
ACAATTCCGTCAAAGCGAGA+AGG + Chr3:3643808-3643827 None:intergenic 45.0%
ACACACTCTTCCTCAAACCA+AGG - Chr3:3652660-3652679 MsG0380011697.01.T01:intron 45.0%
ACAGCTGAATGGAGCATACA+AGG - Chr3:3650424-3650443 MsG0380011697.01.T01:intron 45.0%
ACTACTATTGTAGCCAACCG+TGG - Chr3:3644788-3644807 MsG0380011697.01.T01:intron 45.0%
AGTTCTACTTACTCTCGGGA+CGG - Chr3:3651032-3651051 MsG0380011697.01.T01:CDS 45.0%
ATCACAGCGATTGTGATGCT+TGG + Chr3:3652585-3652604 None:intergenic 45.0%
ATCCACAAAGTCTAAGGAGC+TGG + Chr3:3648595-3648614 None:intergenic 45.0%
ATCCGGAGACATGAGTATTC+TGG + Chr3:3652031-3652050 None:intergenic 45.0%
ATGGAACCTTCTCGCTTTGA+CGG - Chr3:3643799-3643818 MsG0380011697.01.T01:CDS 45.0%
CAAACGAGTGGAAGATGTCA+AGG + Chr3:3650882-3650901 None:intergenic 45.0%
CAAAGCAAAGCGTGATGCTT+TGG + Chr3:3647189-3647208 None:intergenic 45.0%
CAACAAGGTAGAATGCAGCA+AGG - Chr3:3652832-3652851 MsG0380011697.01.T01:intron 45.0%
CAACATTGGATGGGCCTATT+GGG - Chr3:3650508-3650527 MsG0380011697.01.T01:intron 45.0%
CAATTGGAGTGTGACAGTAG+TGG - Chr3:3645390-3645409 MsG0380011697.01.T01:intron 45.0%
CACTACTGTCACACTCCAAT+TGG + Chr3:3645392-3645411 None:intergenic 45.0%
CAGGGAAGCTTATGATGTTG+AGG - Chr3:3650054-3650073 MsG0380011697.01.T01:intron 45.0%
CCATGGAAACAAGCTCACAA+AGG + Chr3:3653185-3653204 None:intergenic 45.0%
CCGAAAGAAGAAACCTCCAA+TGG - Chr3:3647271-3647290 MsG0380011697.01.T01:intron 45.0%
CCGTGCAACTTTCTAACTGT+TGG + Chr3:3647681-3647700 None:intergenic 45.0%
CGATTGTGATGCTTGGGAAA+TGG + Chr3:3652578-3652597 None:intergenic 45.0%
CTACATGTACTCCACAACCA+TGG + Chr3:3647028-3647047 None:intergenic 45.0%
CTCAAGTGGTTGATCGAGAA+TGG - Chr3:3650560-3650579 MsG0380011697.01.T01:intron 45.0%
CTCCAGAATACTCATGTCTC+CGG - Chr3:3652026-3652045 MsG0380011697.01.T01:intron 45.0%
CTTCAGCGGAAAGATATGTC+TGG + Chr3:3644758-3644777 None:intergenic 45.0%
CTTGCTGCATTCTACCTTGT+TGG + Chr3:3652834-3652853 None:intergenic 45.0%
GAATGTCAGCAAGTGCAGAT+CGG - Chr3:3646712-3646731 MsG0380011697.01.T01:CDS 45.0%
GATCCCCCAACAAATTTAGG+TGG + Chr3:3646234-3646253 None:intergenic 45.0%
GCACTTGACATGCTTTCACA+TGG - Chr3:3646261-3646280 MsG0380011697.01.T01:intron 45.0%
GCATGGGATGAAAGTGATTG+TGG - Chr3:3649470-3649489 MsG0380011697.01.T01:intron 45.0%
GGGTTACTCAGTAACCATGA+AGG + Chr3:3647643-3647662 None:intergenic 45.0%
GGTTAAGAGCAGTAACAGCA+GGG + Chr3:3653149-3653168 None:intergenic 45.0%
GTACTTGAGACTGTAATGGC+TGG + Chr3:3650623-3650642 None:intergenic 45.0%
GTAGTAACGGTGTTTCGTTG+CGG - Chr3:3652321-3652340 MsG0380011697.01.T01:intron 45.0%
GTGGATTTGCATGCAGTTGA+AGG - Chr3:3649489-3649508 MsG0380011697.01.T01:intron 45.0%
TATATTGTCCGTGCGTCGAA+CGG + Chr3:3651788-3651807 None:intergenic 45.0%
TCAACCACTTGAGACTCCAA+TGG + Chr3:3650553-3650572 None:intergenic 45.0%
TCACAGCGATTGTGATGCTT+GGG + Chr3:3652584-3652603 None:intergenic 45.0%
TCCACAAAGTCTAAGGAGCT+GGG + Chr3:3648594-3648613 None:intergenic 45.0%
TCCTAGCATTCTGTCTAAGG+AGG + Chr3:3649835-3649854 None:intergenic 45.0%
TCCTCCTTAGACAGAATGCT+AGG - Chr3:3649831-3649850 MsG0380011697.01.T01:intron 45.0%
TCTATGACAGAGACTGTCTG+AGG + Chr3:3649581-3649600 None:intergenic 45.0%
TGAATCAGAACCAGAAGCTC+TGG - Chr3:3648943-3648962 MsG0380011697.01.T01:intron 45.0%
TGACCGCGACAACAAGTTAT+TGG + Chr3:3652413-3652432 None:intergenic 45.0%
TGATGTATGTGGTCCATTGG+AGG + Chr3:3647287-3647306 None:intergenic 45.0%
TGGTACTCAAGTCAAACGAG+TGG + Chr3:3650894-3650913 None:intergenic 45.0%
TGTTGTTCGTCGTCTTTGTG+CGG + Chr3:3652137-3652156 None:intergenic 45.0%
TGTTTGCTTTGCAGGACCAT+TGG - Chr3:3646021-3646040 MsG0380011697.01.T01:intron 45.0%
! AATGCTAACTTGTGCCCTCA+AGG - Chr3:3651408-3651427 MsG0380011697.01.T01:intron 45.0%
! ACACTAGTTGCAGAAGGCAT+GGG + Chr3:3647772-3647791 None:intergenic 45.0%
! AGTGAGCCCCATTGATTGAA+GGG - Chr3:3652537-3652556 MsG0380011697.01.T01:intron 45.0%
! ATGCTAACTTGTGCCCTCAA+GGG - Chr3:3651409-3651428 MsG0380011697.01.T01:intron 45.0%
! CCACTAGTTTCCGTACTTTG+CGG - Chr3:3652800-3652819 MsG0380011697.01.T01:intron 45.0%
! CCTTTGTGAGCTTGTTTCCA+TGG - Chr3:3653182-3653201 MsG0380011697.01.T01:CDS 45.0%
! CTTCTGGTTGGGAAACATTC+AGG - Chr3:3644816-3644835 MsG0380011697.01.T01:intron 45.0%
! GCACTTGCTGACATTCACTA+AGG + Chr3:3646708-3646727 None:intergenic 45.0%
! GGGTTTGAAATGAGAGAGGA+AGG - Chr3:3646382-3646401 MsG0380011697.01.T01:CDS 45.0%
! GGTTTGAGGAAGAGTGTGTT+TGG + Chr3:3652659-3652678 None:intergenic 45.0%
! GTCATTGATTGGATCTGCAC+TGG - Chr3:3652073-3652092 MsG0380011697.01.T01:intron 45.0%
! TGGTCTATTTTGCGGGTACT+TGG - Chr3:3645120-3645139 MsG0380011697.01.T01:intron 45.0%
!! AGTTGCTTGGCTTTTGCTGA+AGG - Chr3:3653039-3653058 MsG0380011697.01.T01:intron 45.0%
!! AGTTTTTGAGCAGCAAAGGC+GGG - Chr3:3650691-3650710 MsG0380011697.01.T01:intron 45.0%
!! GAGCTTCTGGTTCTGATTCA+AGG + Chr3:3648943-3648962 None:intergenic 45.0%
!! GAGTTTTTGAGCAGCAAAGG+CGG - Chr3:3650690-3650709 MsG0380011697.01.T01:intron 45.0%
!! GATTTGAGAACTGATGGTGG+TGG + Chr3:3647115-3647134 None:intergenic 45.0%
!! GCATCTCCCCAGAAAGTATT+TGG - Chr3:3646935-3646954 MsG0380011697.01.T01:intron 45.0%
!! GTTGCTTGGCTTTTGCTGAA+GGG - Chr3:3653040-3653059 MsG0380011697.01.T01:intron 45.0%
!! TTGCTTGGCTTTTGCTGAAG+GGG - Chr3:3653041-3653060 MsG0380011697.01.T01:intron 45.0%
!!! CTCCTTCGACCGCTTTTTTA+TGG + Chr3:3652927-3652946 None:intergenic 45.0%
!! TATTAATTATAGTAAATTAA+TGG - Chr3:3649371-3649390 MsG0380011697.01.T01:intron 5.0%
!!! AAATATAATTAATTTTGTAT+GGG - Chr3:3644187-3644206 MsG0380011697.01.T01:intron 5.0%
!!! TCATTTTTTTTTTTTTAATT+AGG + Chr3:3652689-3652708 None:intergenic 5.0%
AATGCAAGACTTGGAGGAGG+AGG - Chr3:3652773-3652792 MsG0380011697.01.T01:intron 50.0%
AGAGACACCACTAAGATCCC+AGG + Chr3:3650264-3650283 None:intergenic 50.0%
AGATGCTGTCGGATACCTGT+TGG - Chr3:3646185-3646204 MsG0380011697.01.T01:intron 50.0%
ATATTGTCCGTGCGTCGAAC+GGG + Chr3:3651787-3651806 None:intergenic 50.0%
CAAATGCTACTGTGCTGCAG+AGG + Chr3:3648718-3648737 None:intergenic 50.0%
CCGCAAAGTACGGAAACTAG+TGG + Chr3:3652803-3652822 None:intergenic 50.0%
CGCCATAAAAAAGCGGTCGA+AGG - Chr3:3652922-3652941 MsG0380011697.01.T01:intron 50.0%
CGGTTAAGAGCAGTAACAGC+AGG + Chr3:3653150-3653169 None:intergenic 50.0%
CTATGCGATAGTGCAATGGC+TGG - Chr3:3653114-3653133 MsG0380011697.01.T01:CDS 50.0%
CTTGCTTTCCACCATCCAAC+AGG + Chr3:3646203-3646222 None:intergenic 50.0%
GAAATTTGTGGGGCAGGAGA+AGG - Chr3:3644995-3645014 MsG0380011697.01.T01:intron 50.0%
GAGCTGATGAATGAGCCACT+AGG - Chr3:3650001-3650020 MsG0380011697.01.T01:intron 50.0%
GCAAATGCAAGACTTGGAGG+AGG - Chr3:3652770-3652789 MsG0380011697.01.T01:intron 50.0%
GCAACATTGGATGGGCCTAT+TGG - Chr3:3650507-3650526 MsG0380011697.01.T01:intron 50.0%
GCAGCAAATGCAAGACTTGG+AGG - Chr3:3652767-3652786 MsG0380011697.01.T01:intron 50.0%
GGAGCTGGGATGTTCTTGAA+AGG + Chr3:3648580-3648599 None:intergenic 50.0%
GGATGAACTGCCGCAAAGTA+CGG + Chr3:3652813-3652832 None:intergenic 50.0%
GTTGGGAGTGAAGCCATGAA+TGG + Chr3:3648877-3648896 None:intergenic 50.0%
TAGTTCCTCCCCATCTTCAG+CGG + Chr3:3644772-3644791 None:intergenic 50.0%
TCCCAGCTCCTTAGACTTTG+TGG - Chr3:3648590-3648609 MsG0380011697.01.T01:intron 50.0%
TTGCGGCAGTTCATCCAACA+AGG - Chr3:3652817-3652836 MsG0380011697.01.T01:intron 50.0%
! GAGCATAGTGGGACAAGAGA+TGG - Chr3:3649528-3649547 MsG0380011697.01.T01:intron 50.0%
! GAGTGAGCCCCATTGATTGA+AGG - Chr3:3652536-3652555 MsG0380011697.01.T01:intron 50.0%
! GCTTGTTGCTGAAGGATGGA+TGG - Chr3:3643780-3643799 MsG0380011697.01.T01:CDS 50.0%
! TCTCTGGTAGTCTTGCGCAT+AGG + Chr3:3650454-3650473 None:intergenic 50.0%
! TGGCTCATTTGCAGCTTTGG+AGG - Chr3:3644934-3644953 MsG0380011697.01.T01:intron 50.0%
!! ACTGGCTTGTTGCTGAAGGA+TGG - Chr3:3643776-3643795 MsG0380011697.01.T01:CDS 50.0%
!! CGGAAGTTGATGCATAGCCA+TGG + Chr3:3653202-3653221 None:intergenic 50.0%
!! GATGGCGGGCGAAAATAATG+AGG - Chr3:3651074-3651093 MsG0380011697.01.T01:CDS 50.0%
!! GGAAACTGGCTTGTTGCTGA+AGG - Chr3:3643772-3643791 MsG0380011697.01.T01:CDS 50.0%
!! GGCTCATTTGCAGCTTTGGA+GGG - Chr3:3644935-3644954 MsG0380011697.01.T01:intron 50.0%
!! GTTTTTGAGCAGCAAAGGCG+GGG - Chr3:3650692-3650711 MsG0380011697.01.T01:intron 50.0%
ACCAGAAGCAGAACCACGGT+TGG + Chr3:3644804-3644823 None:intergenic 55.0%
CCCAACCAGAAGCAGAACCA+CGG + Chr3:3644808-3644827 None:intergenic 55.0%
GACAGAGCCTGGGATCTTAG+TGG - Chr3:3650254-3650273 MsG0380011697.01.T01:intron 55.0%
GCTGTCGGATACCTGTTGGA+TGG - Chr3:3646189-3646208 MsG0380011697.01.T01:intron 55.0%
GTAGGGGATGGACAGCTGAA+TGG - Chr3:3650413-3650432 MsG0380011697.01.T01:intron 55.0%
GTCGGATACCTGTTGGATGG+TGG - Chr3:3646192-3646211 MsG0380011697.01.T01:intron 55.0%
GTGTTTCGTTGCGGCTGTGA+TGG - Chr3:3652330-3652349 MsG0380011697.01.T01:intron 55.0%
TCTTTCCGCTGAAGATGGGG+AGG - Chr3:3644764-3644783 MsG0380011697.01.T01:intron 55.0%
! ACCGTGGTTCTGCTTCTGGT+TGG - Chr3:3644804-3644823 MsG0380011697.01.T01:intron 55.0%
! CCGTGGTTCTGCTTCTGGTT+GGG - Chr3:3644805-3644824 MsG0380011697.01.T01:intron 55.0%
!! TCTTGGCTTGCGCGGTTTGT+GGG + Chr3:3652868-3652887 None:intergenic 55.0%
!! TTCTTGGCTTGCGCGGTTTG+TGG + Chr3:3652869-3652888 None:intergenic 55.0%
CGTCGTCAGCGTTGCAGATC+CGG + Chr3:3652048-3652067 None:intergenic 60.0%
GGTGCAGAGTTTGAGCCCGT+TGG + Chr3:3645464-3645483 None:intergenic 60.0%
GTCGCGGTCATTCTCGTCGA+GGG - Chr3:3652423-3652442 MsG0380011697.01.T01:intron 60.0%
TGTCGCGGTCATTCTCGTCG+AGG - Chr3:3652422-3652441 MsG0380011697.01.T01:intron 60.0%
! GCCAACCGTGGTTCTGCTTC+TGG - Chr3:3644800-3644819 MsG0380011697.01.T01:intron 60.0%
!! GCGATTTTGGGTGGCGCCAA+TGG + Chr3:3646040-3646059 None:intergenic 60.0%
ACCTCCACCCGTTCGACGCA+CGG - Chr3:3651777-3651796 MsG0380011697.01.T01:intron 65.0%
TTGTCCGTGCGTCGAACGGG+TGG + Chr3:3651784-3651803 None:intergenic 65.0%
TCCGTGCGTCGAACGGGTGG+AGG + Chr3:3651781-3651800 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 3643679 3653230 3643679 ID=MsG0380011697.01;Name=MsG0380011697.01
Chr3 mRNA 3643679 3653230 3643679 ID=MsG0380011697.01.T01;Parent=MsG0380011697.01;Name=MsG0380011697.01.T01;_AED=0.35;_eAED=0.36;_QI=0|0|0|1|0.6|0.66|6|0|309
Chr3 exon 3653066 3653230 3653066 ID=MsG0380011697.01.T01:exon:1846;Parent=MsG0380011697.01.T01
Chr3 exon 3650962 3651114 3650962 ID=MsG0380011697.01.T01:exon:1845;Parent=MsG0380011697.01.T01
Chr3 exon 3647345 3647438 3647345 ID=MsG0380011697.01.T01:exon:1844;Parent=MsG0380011697.01.T01
Chr3 exon 3646601 3646783 3646601 ID=MsG0380011697.01.T01:exon:1843;Parent=MsG0380011697.01.T01
Chr3 exon 3646328 3646492 3646328 ID=MsG0380011697.01.T01:exon:1842;Parent=MsG0380011697.01.T01
Chr3 exon 3643679 3643848 3643679 ID=MsG0380011697.01.T01:exon:1841;Parent=MsG0380011697.01.T01
Chr3 CDS 3653066 3653230 3653066 ID=MsG0380011697.01.T01:cds;Parent=MsG0380011697.01.T01
Chr3 CDS 3650962 3651114 3650962 ID=MsG0380011697.01.T01:cds;Parent=MsG0380011697.01.T01
Chr3 CDS 3647345 3647438 3647345 ID=MsG0380011697.01.T01:cds;Parent=MsG0380011697.01.T01
Chr3 CDS 3646601 3646783 3646601 ID=MsG0380011697.01.T01:cds;Parent=MsG0380011697.01.T01
Chr3 CDS 3646328 3646492 3646328 ID=MsG0380011697.01.T01:cds;Parent=MsG0380011697.01.T01
Chr3 CDS 3643679 3643848 3643679 ID=MsG0380011697.01.T01:cds;Parent=MsG0380011697.01.T01
Gene Sequence

>MsG0380011697.01.T01

ATGGAATATCCAAACTATTATTTGAGCTTCTTATTGGCTTTATGTCTTTCATGTCCTCACTCTCTTTCGTTTGCTTACAAAGCTGTGAATTTAGGAAACTGGCTTGTTGCTGAAGGATGGATGGAACCTTCTCGCTTTGACGGAATTGTCAACAAAGATCTCTTGGTTCAATCGAAGACATCAGTGACTGCAGATTATCAAGGCACAAATTGGGATGACAATGATCCATCGGTTTTTCATATTACAATTGTAAACACATTACAAGGAGAGTACCAACTTACTAATGGTCATGGCAATAGAGCTCCTCAAGTTATGCGACATGGGATGAAAGTGATTGTGGATTTGCATGCAGTTGAAGGTTCTCAAAATGGTTTTGAGCATAGTGGGACAAGAGATGGATATACAGAATGGGATTCTAAACTTCTTCTCTCATTTGTCAAAGGCTTTGATAAAGTAGTCCTTGATGTGCATTACTACAATATGTATTCGGATAAATTCAATGGCATGAATGTTCAACAAAATATTGACTACATAAGAAATGACAGAGCCTGGGATCTTAGTGGTGTCTCTTCATCAAATGCTCTTAGTTTTGTAGGGGATGGACAGCTGAATGGAGCATACAAGGTGCGCCTATGCGCAAGACTACCAGAGATATGTCCAAGCACAAATGGATGTGTATTCTCATGCAACATTGGATGGGCCTATTGGGCCTATAAATGTCAATATAACCATTGGAGTCTCAAGTGGTTGATCGAGAATGGGGATCCTGATACTATTAGTTATAATTGCGGACTTGCTATTGAAAAACCTACTCTATGCGATAGTGCAATGGCTGGTACTGTTAACCCTGCTGTTACTGCTCTTAACCGTCAAATGGAATTCCTTTGTGAGCTTGTTTCCATGGCTATGCATCAACTTCCGAACTATTGA
Protein sequence

>MsG0380011697.01.T01

MEYPNYYLSFLLALCLSCPHSLSFAYKAVNLGNWLVAEGWMEPSRFDGIVNKDLLVQSKTSVTADYQGTNWDDNDPSVFHITIVNTLQGEYQLTNGHGNRAPQVMRHGMKVIVDLHAVEGSQNGFEHSGTRDGYTEWDSKLLLSFVKGFDKVVLDVHYYNMYSDKFNGMNVQQNIDYIRNDRAWDLSGVSSSNALSFVGDGQLNGAYKVRLCARLPEICPSTNGCVFSCNIGWAYWAYKCQYNHWSLKWLIENGDPDTISYNCGLAIEKPTLCDSAMAGTVNPAVTALNRQMEFLCELVSMAMHQLPNY*