Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004232.01.T01 | XP_013468853.1 | 94.937 | 474 | 23 | 1 | 1 | 474 | 1 | 473 | 0 | 930 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004232.01.T01 | O23086 | 48.637 | 477 | 206 | 6 | 5 | 443 | 8 | 483 | 8.80E-159 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004232.01.T01 | A0A072VXW6 | 94.937 | 474 | 23 | 1 | 1 | 474 | 1 | 473 | 0.0 | 930 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048134.01 | MsG0180004232.01 | 0.840074 | 1.082401e-57 | 1.524640e-54 |
| MsG0180000897.01 | MsG0180004232.01 | 0.803140 | 4.017467e-49 | 2.003461e-46 |
| MsG0180001008.01 | MsG0180004232.01 | 0.829006 | 6.550754e-55 | 6.619473e-52 |
| MsG0180001029.01 | MsG0180004232.01 | 0.805426 | 1.342856e-49 | 7.102130e-47 |
| MsG0180003320.01 | MsG0180004232.01 | 0.837163 | 6.111633e-57 | 7.871923e-54 |
| MsG0180003322.01 | MsG0180004232.01 | 0.803361 | 3.616182e-49 | 1.813529e-46 |
| MsG0180003375.01 | MsG0180004232.01 | 0.800133 | 1.663022e-48 | 7.683716e-46 |
| MsG0180004232.01 | MsG0180004359.01 | 0.980929 | 2.281331e-151 | 5.578820e-145 |
| MsG0180004232.01 | MsG0280006546.01 | 0.832621 | 8.517186e-56 | 9.571731e-53 |
| MsG0180004232.01 | MsG0280006575.01 | 0.813661 | 2.286585e-51 | 1.502295e-48 |
| MsG0180004232.01 | MsG0280008226.01 | 0.805977 | 1.028520e-49 | 5.517495e-47 |
| MsG0180004232.01 | MsG0280009232.01 | 0.826980 | 2.014165e-54 | 1.918636e-51 |
| MsG0180004232.01 | MsG0280009253.01 | 0.834021 | 3.812042e-56 | 4.467603e-53 |
| MsG0180004232.01 | MsG0380011635.01 | 0.804802 | 1.813398e-49 | 9.438732e-47 |
| MsG0180004232.01 | MsG0380011697.01 | 0.805937 | 1.048542e-49 | 5.619097e-47 |
| MsG0180004232.01 | MsG0380011701.01 | 0.807141 | 5.843189e-50 | 3.229446e-47 |
| MsG0180004232.01 | MsG0380013213.01 | 0.812673 | 3.766213e-51 | 2.409497e-48 |
| MsG0180004232.01 | MsG0380014344.01 | 0.821878 | 3.194092e-53 | 2.631206e-50 |
| MsG0180004232.01 | MsG0380015659.01 | 0.819765 | 9.781715e-53 | 7.596623e-50 |
| MsG0180004232.01 | MsG0380015660.01 | 0.820411 | 6.956537e-53 | 5.500523e-50 |
| MsG0180004232.01 | MsG0380016299.01 | 0.859157 | 5.020765e-63 | 1.313198e-59 |
| MsG0180004232.01 | MsG0380016300.01 | 0.827697 | 1.355612e-54 | 1.318552e-51 |
| MsG0180004232.01 | MsG0380016301.01 | 0.820461 | 6.775572e-53 | 5.364779e-50 |
| MsG0180004232.01 | MsG0380017168.01 | 0.806135 | 9.529972e-50 | 5.132807e-47 |
| MsG0180004232.01 | MsG0380017901.01 | 0.842765 | 2.117962e-58 | 3.243919e-55 |
| MsG0180004232.01 | MsG0480018438.01 | 0.807493 | 4.919924e-50 | 2.744329e-47 |
| MsG0180004232.01 | MsG0480018439.01 | 0.800034 | 1.741219e-48 | 8.024861e-46 |
| MsG0180004232.01 | MsG0480018559.01 | 0.815035 | 1.135896e-51 | 7.745729e-49 |
| MsG0180004232.01 | MsG0480019146.01 | 0.827324 | 1.665892e-54 | 1.603059e-51 |
| MsG0180004232.01 | MsG0480019346.01 | 0.823923 | 1.066618e-53 | 9.310863e-51 |
| MsG0180004232.01 | MsG0480019842.01 | 0.802458 | 5.555867e-49 | 2.722977e-46 |
| MsG0180004232.01 | MsG0480020539.01 | 0.801423 | 9.068608e-49 | 4.329161e-46 |
| MsG0180004232.01 | MsG0480020904.01 | 0.854617 | 1.092669e-61 | 2.454789e-58 |
| MsG0180004232.01 | MsG0480021133.01 | 0.843282 | 1.542296e-58 | 2.401341e-55 |
| MsG0180004232.01 | MsG0480021360.01 | 0.805506 | 1.292054e-49 | 6.847261e-47 |
| MsG0180004232.01 | MsG0480022055.01 | 0.804808 | 1.807974e-49 | 9.412181e-47 |
| MsG0180004232.01 | MsG0480023432.01 | 0.844434 | 7.576738e-59 | 1.223030e-55 |
| MsG0180004232.01 | MsG0580024087.01 | 0.808745 | 2.662661e-50 | 1.534686e-47 |
| MsG0180004232.01 | MsG0580025961.01 | 0.815205 | 1.041650e-51 | 7.135378e-49 |
| MsG0180004232.01 | MsG0580026521.01 | 0.821589 | 3.725755e-53 | 3.043812e-50 |
| MsG0180004232.01 | MsG0580027752.01 | 0.833143 | 6.315614e-56 | 7.209798e-53 |
| MsG0180004232.01 | MsG0580027753.01 | 0.816751 | 4.705109e-52 | 3.362680e-49 |
| MsG0180004232.01 | MsG0580029240.01 | 0.803102 | 4.090930e-49 | 2.038035e-46 |
| MsG0180004232.01 | MsG0580029359.01 | 0.814574 | 1.437568e-51 | 9.681582e-49 |
| MsG0180004232.01 | MsG0580029937.01 | 0.828492 | 8.725431e-55 | 8.686644e-52 |
| MsG0180004232.01 | MsG0680030465.01 | 0.824108 | 9.652086e-54 | 8.468953e-51 |
| MsG0180004232.01 | MsG0680031200.01 | 0.839695 | 1.358812e-57 | 1.891202e-54 |
| MsG0180004232.01 | MsG0680032932.01 | 0.800176 | 1.629361e-48 | 7.536298e-46 |
| MsG0180004232.01 | MsG0680033014.01 | 0.812051 | 5.149910e-51 | 3.240183e-48 |
| MsG0180004232.01 | MsG0680034238.01 | 0.813765 | 2.168497e-51 | 1.428690e-48 |
| MsG0180004232.01 | MsG0680034348.01 | 0.808333 | 3.260451e-50 | 1.859222e-47 |
| MsG0180004232.01 | MsG0680034354.01 | 0.827240 | 1.744889e-54 | 1.674916e-51 |
| MsG0180004232.01 | MsG0680034356.01 | 0.829451 | 5.111215e-55 | 5.233057e-52 |
| MsG0180004232.01 | MsG0680034417.01 | 0.804729 | 1.878498e-49 | 9.759221e-47 |
| MsG0180004232.01 | MsG0680034418.01 | 0.803437 | 3.487971e-49 | 1.752731e-46 |
| MsG0180004232.01 | MsG0680034728.01 | 0.802248 | 6.137954e-49 | 2.992252e-46 |
| MsG0180004232.01 | MsG0680034974.01 | 0.839919 | 1.188183e-57 | 1.665459e-54 |
| MsG0180004232.01 | MsG0680034978.01 | 0.803449 | 3.468044e-49 | 1.743257e-46 |
| MsG0180004232.01 | MsG0780035930.01 | 0.806373 | 8.489374e-50 | 4.600134e-47 |
| MsG0180004232.01 | MsG0780036649.01 | 0.837025 | 6.628271e-57 | 8.502232e-54 |
| MsG0180004232.01 | MsG0780036839.01 | 0.831756 | 1.394043e-55 | 1.527286e-52 |
| MsG0180004232.01 | MsG0780038313.01 | 0.810433 | 1.155377e-50 | 6.963318e-48 |
| MsG0180004232.01 | MsG0780038519.01 | 0.852924 | 3.353732e-61 | 7.120467e-58 |
| MsG0180004232.01 | MsG0780038657.01 | 0.815966 | 7.050344e-52 | 4.931722e-49 |
| MsG0180004232.01 | MsG0780038818.01 | 0.806923 | 6.496743e-50 | 3.570468e-47 |
| MsG0180004232.01 | MsG0780039237.01 | 0.814461 | 1.522885e-51 | 1.022501e-48 |
| MsG0180004232.01 | MsG0780039373.01 | 0.810254 | 1.263021e-50 | 7.576509e-48 |
| MsG0180004232.01 | MsG0780039923.01 | 0.808024 | 3.795240e-50 | 2.146479e-47 |
| MsG0180004232.01 | MsG0780040403.01 | 0.803269 | 3.778639e-49 | 1.890601e-46 |
| MsG0180004232.01 | MsG0780040497.01 | 0.814965 | 1.177258e-51 | 8.012394e-49 |
| MsG0180004232.01 | MsG0780040498.01 | 0.847884 | 8.719595e-60 | 1.571978e-56 |
| MsG0180004232.01 | MsG0780040716.01 | 0.816400 | 5.638548e-52 | 3.991291e-49 |
| MsG0180004232.01 | MsG0780041248.01 | 0.805993 | 1.020454e-49 | 5.476569e-47 |
| MsG0180004232.01 | MsG0780041500.01 | 0.845322 | 4.365480e-59 | 7.248177e-56 |
| MsG0180004232.01 | MsG0880041977.01 | 0.829432 | 5.165610e-55 | 5.285934e-52 |
| MsG0180004232.01 | MsG0880042642.01 | 0.804586 | 2.011724e-49 | 1.041210e-46 |
| MsG0180004232.01 | MsG0880043217.01 | 0.829534 | 4.879111e-55 | 5.007433e-52 |
| MsG0180004232.01 | MsG0880043245.01 | 0.808976 | 2.376800e-50 | 1.378341e-47 |
| MsG0180004232.01 | MsG0880045854.01 | 0.821090 | 4.857332e-53 | 3.913815e-50 |
| MsG0180004232.01 | MsG0880046271.01 | 0.832663 | 8.313945e-56 | 9.355482e-53 |
| MsG0180004232.01 | MsG0880046273.01 | 0.844316 | 8.152406e-59 | 1.311050e-55 |
| MsG0180004232.01 | MsG0880046870.01 | 0.802877 | 4.554105e-49 | 2.255893e-46 |
| MsG0180004232.01 | MsG0880047383.01 | 0.848039 | 7.902435e-60 | 1.431504e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480020442.01 | MsG0180004232.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004232.01.T01 | MTR_1g077660 | 94.937 | 474 | 23 | 1 | 1 | 474 | 1 | 473 | 0.0 | 930 |
| MsG0180004232.01.T01 | MTR_1g077670 | 82.983 | 476 | 75 | 4 | 4 | 474 | 10 | 484 | 0.0 | 802 |
| MsG0180004232.01.T01 | MTR_7g106260 | 44.622 | 437 | 225 | 5 | 19 | 450 | 11 | 435 | 7.68e-115 | 347 |
| MsG0180004232.01.T01 | MTR_4g051575 | 44.527 | 402 | 198 | 5 | 37 | 435 | 35 | 414 | 3.96e-110 | 334 |
| MsG0180004232.01.T01 | MTR_2g087288 | 43.035 | 402 | 213 | 4 | 46 | 443 | 37 | 426 | 1.27e-109 | 332 |
| MsG0180004232.01.T01 | MTR_1g115140 | 41.622 | 370 | 205 | 4 | 25 | 384 | 16 | 384 | 1.19e-97 | 304 |
| MsG0180004232.01.T01 | MTR_2g087285 | 41.606 | 411 | 221 | 5 | 34 | 439 | 25 | 421 | 4.57e-97 | 300 |
| MsG0180004232.01.T01 | MTR_1g115175 | 34.615 | 520 | 254 | 8 | 23 | 458 | 10 | 527 | 1.38e-96 | 301 |
| MsG0180004232.01.T01 | MTR_1g115190 | 41.667 | 372 | 206 | 5 | 23 | 384 | 11 | 381 | 1.94e-87 | 278 |
| MsG0180004232.01.T01 | MTR_5g014310 | 40.688 | 349 | 199 | 4 | 42 | 383 | 53 | 400 | 6.02e-84 | 269 |
| MsG0180004232.01.T01 | MTR_4g098570 | 38.503 | 374 | 218 | 3 | 17 | 384 | 25 | 392 | 5.43e-82 | 263 |
| MsG0180004232.01.T01 | MTR_7g094770 | 35.878 | 393 | 236 | 4 | 50 | 438 | 60 | 440 | 1.03e-79 | 254 |
| MsG0180004232.01.T01 | MTR_4g098610 | 39.142 | 373 | 215 | 3 | 17 | 383 | 25 | 391 | 2.32e-76 | 249 |
| MsG0180004232.01.T01 | MTR_8g104110 | 36.339 | 366 | 213 | 8 | 34 | 382 | 51 | 413 | 5.14e-74 | 244 |
| MsG0180004232.01.T01 | MTR_8g104130 | 36.314 | 369 | 226 | 6 | 14 | 376 | 23 | 388 | 5.15e-72 | 238 |
| MsG0180004232.01.T01 | MTR_6g084680 | 35.676 | 370 | 220 | 6 | 24 | 377 | 59 | 426 | 5.27e-72 | 239 |
| MsG0180004232.01.T01 | MTR_8g104120 | 35.342 | 365 | 216 | 8 | 34 | 382 | 47 | 407 | 1.37e-66 | 224 |
| MsG0180004232.01.T01 | MTR_4g051575 | 41.216 | 296 | 151 | 5 | 144 | 435 | 4 | 280 | 2.35e-65 | 214 |
| MsG0180004232.01.T01 | MTR_1g111250 | 32.676 | 355 | 223 | 5 | 40 | 382 | 68 | 418 | 1.44e-63 | 215 |
| MsG0180004232.01.T01 | MTR_0710s0020 | 48.555 | 173 | 85 | 2 | 23 | 191 | 11 | 183 | 9.70e-44 | 152 |
| MsG0180004232.01.T01 | MTR_6g015325 | 36.905 | 84 | 51 | 2 | 101 | 184 | 7 | 88 | 9.05e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004232.01.T01 | AT4G00910 | 49.892 | 465 | 206 | 5 | 5 | 443 | 8 | 471 | 1.28e-163 | 471 |
| MsG0180004232.01.T01 | AT1G08440 | 43.596 | 406 | 211 | 2 | 36 | 435 | 3 | 396 | 3.33e-117 | 353 |
| MsG0180004232.01.T01 | AT2G27240 | 42.054 | 409 | 219 | 3 | 36 | 438 | 3 | 399 | 4.14e-112 | 340 |
| MsG0180004232.01.T01 | AT1G08430 | 42.410 | 415 | 218 | 3 | 36 | 441 | 3 | 405 | 7.43e-111 | 337 |
| MsG0180004232.01.T01 | AT2G27240 | 40.230 | 435 | 216 | 4 | 36 | 438 | 3 | 425 | 9.63e-109 | 332 |
| MsG0180004232.01.T01 | AT3G11680 | 43.721 | 430 | 215 | 7 | 18 | 438 | 10 | 421 | 2.78e-107 | 327 |
| MsG0180004232.01.T01 | AT3G11680 | 43.721 | 430 | 215 | 7 | 18 | 438 | 8 | 419 | 3.15e-107 | 327 |
| MsG0180004232.01.T01 | AT4G17970 | 37.978 | 366 | 222 | 3 | 21 | 383 | 15 | 378 | 5.95e-89 | 282 |
| MsG0180004232.01.T01 | AT5G46600 | 37.950 | 361 | 214 | 3 | 32 | 383 | 28 | 387 | 1.60e-87 | 278 |
| MsG0180004232.01.T01 | AT5G46610 | 36.224 | 392 | 243 | 2 | 9 | 394 | 4 | 394 | 2.18e-87 | 278 |
| MsG0180004232.01.T01 | AT1G18420 | 35.770 | 383 | 225 | 6 | 19 | 382 | 52 | 432 | 8.07e-76 | 248 |
| MsG0180004232.01.T01 | AT5G46610 | 32.908 | 392 | 232 | 3 | 9 | 394 | 4 | 370 | 9.38e-74 | 241 |
| MsG0180004232.01.T01 | AT3G18440 | 37.127 | 369 | 211 | 9 | 30 | 382 | 63 | 426 | 3.31e-73 | 242 |
| MsG0180004232.01.T01 | AT1G18420 | 36.752 | 351 | 205 | 5 | 47 | 382 | 1 | 349 | 1.71e-72 | 238 |
| MsG0180004232.01.T01 | AT5G46610 | 32.143 | 392 | 212 | 3 | 9 | 394 | 4 | 347 | 1.03e-66 | 222 |
| MsG0180004232.01.T01 | AT2G17470 | 33.613 | 357 | 219 | 8 | 34 | 376 | 18 | 370 | 6.30e-62 | 211 |
| MsG0180004232.01.T01 | AT2G17470 | 33.613 | 357 | 219 | 8 | 34 | 376 | 40 | 392 | 8.36e-62 | 211 |
| MsG0180004232.01.T01 | AT1G68600 | 34.770 | 348 | 210 | 7 | 43 | 376 | 45 | 389 | 3.07e-60 | 206 |
| MsG0180004232.01.T01 | AT1G25480 | 33.611 | 360 | 222 | 7 | 30 | 376 | 43 | 398 | 8.09e-59 | 202 |
| MsG0180004232.01.T01 | AT4G17585 | 43.956 | 91 | 47 | 3 | 21 | 108 | 15 | 104 | 8.35e-17 | 77.8 |
Find 84 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCATTGATGCTCTTAT+TGG | 0.158685 | 1:+75261510 | MsG0180004232.01.T01:CDS |
| ACTTGAATTAATTCTATTAT+TGG | 0.173844 | 1:-75261949 | None:intergenic |
| AGAATTTCCACTATTATAAT+TGG | 0.174482 | 1:+75260777 | MsG0180004232.01.T01:CDS |
| TTGTCACATTTAGACATTTC+TGG | 0.186292 | 1:-75262066 | None:intergenic |
| TGGAAGCAATATCTTAAAAT+TGG | 0.274268 | 1:+75261465 | MsG0180004232.01.T01:CDS |
| TTCAGGCTAATTTAGCTAGA+TGG | 0.290212 | 1:+75261406 | MsG0180004232.01.T01:intron |
| GCACGACTGTTCGCCCTGTT+TGG | 0.294097 | 1:+75260823 | MsG0180004232.01.T01:CDS |
| AAGATTTATACCAACTATAA+AGG | 0.295645 | 1:+75260656 | MsG0180004232.01.T01:CDS |
| CAATGATTCTTCTGTTGCTT+TGG | 0.297791 | 1:-75261253 | None:intergenic |
| CTTCCAACACCATCATATAA+AGG | 0.302727 | 1:-75259820 | None:intergenic |
| CTTGAATTAATTCTATTATT+GGG | 0.328345 | 1:-75261948 | None:intergenic |
| CACGACTGTTCGCCCTGTTT+GGG | 0.329652 | 1:+75260824 | MsG0180004232.01.T01:CDS |
| GTTAGACTCACTTGCTGCTT+GGG | 0.330664 | 1:-75261196 | None:intergenic |
| AATTGATGAATTGTTTGATT+TGG | 0.335580 | 1:+75260746 | MsG0180004232.01.T01:CDS |
| AGTGAGGCTCCAACAATTAC+AGG | 0.347390 | 1:-75260182 | None:intergenic |
| TTCAGTTTGGTTTCAATATC+CGG | 0.352067 | 1:+75260717 | MsG0180004232.01.T01:CDS |
| ATTTATCCTCACTTTCAGTT+TGG | 0.369853 | 1:+75260704 | MsG0180004232.01.T01:CDS |
| TTCTAGCCTTTGGTGTACAT+TGG | 0.372115 | 1:+75260129 | MsG0180004232.01.T01:CDS |
| GTTGTCTGCTGAATGATGTT+TGG | 0.372763 | 1:-75262091 | None:intergenic |
| TCTAGCCTTTGGTGTACATT+GGG | 0.373912 | 1:+75260130 | MsG0180004232.01.T01:CDS |
| CTTGCCGGGCTTCTAGCCTT+TGG | 0.375772 | 1:+75260119 | MsG0180004232.01.T01:CDS |
| ATATGTGGAACTACCCTTGC+CGG | 0.376919 | 1:+75260104 | MsG0180004232.01.T01:CDS |
| TCCTCATCATTCTGTTGGTC+TGG | 0.378128 | 1:-75262123 | None:intergenic |
| TGGTCTAGAACTCTATGTTT+TGG | 0.392947 | 1:+75260848 | MsG0180004232.01.T01:CDS |
| TTGCCTCCTCATCATTCTGT+TGG | 0.396110 | 1:-75262128 | None:intergenic |
| TGTTAGACTCACTTGCTGCT+TGG | 0.402132 | 1:-75261197 | None:intergenic |
| TCCTCATTATTCAAACCATC+TGG | 0.403183 | 1:-75262164 | None:intergenic |
| TTAATAAATTCTGAAGCTCT+AGG | 0.407771 | 1:-75261867 | None:intergenic |
| CAATTCATCAATTCTATAAC+CGG | 0.413490 | 1:-75260736 | None:intergenic |
| AGTTCTAGACCAGCCCAAAC+AGG | 0.414800 | 1:-75260837 | None:intergenic |
| ACTGTTCGCCCTGTTTGGGC+TGG | 0.434664 | 1:+75260828 | MsG0180004232.01.T01:CDS |
| TGAAGTTCCAATTATAATAG+TGG | 0.434981 | 1:-75260784 | None:intergenic |
| CAAAGCAACAGAAGAATCAT+TGG | 0.439510 | 1:+75261254 | MsG0180004232.01.T01:CDS |
| TTTCACAAATTTGCACAACT+TGG | 0.440882 | 1:-75259698 | None:intergenic |
| TTCATCCATTGTTTGAAAGT+AGG | 0.446047 | 1:+75259757 | MsG0180004232.01.T01:CDS |
| TACTTGAAACCTTTATATGA+TGG | 0.450489 | 1:+75259811 | MsG0180004232.01.T01:CDS |
| TCAGGCTAATTTAGCTAGAT+GGG | 0.451798 | 1:+75261407 | MsG0180004232.01.T01:intron |
| TCAAAACGAGCCTTTATAGT+TGG | 0.456472 | 1:-75260666 | None:intergenic |
| GCTAGATGGGAGCCTGCTCA+TGG | 0.466832 | 1:+75261420 | MsG0180004232.01.T01:CDS |
| GAAATTCCAGCTCTCTTCCA+TGG | 0.473583 | 1:-75259640 | None:intergenic |
| CAATGGGAACCTGTAATTGT+TGG | 0.475128 | 1:+75260173 | MsG0180004232.01.T01:CDS |
| TGACTAATGAAAAGGTAGAA+TGG | 0.476764 | 1:+75259596 | MsG0180004232.01.T01:CDS |
| AAGCTGACCTTGCAAAGAGT+TGG | 0.485113 | 1:-75260895 | None:intergenic |
| CATTGGGTTGCTAGTAAAGC+AGG | 0.488274 | 1:+75260146 | MsG0180004232.01.T01:CDS |
| ATTAAAGATGACTAATGAAA+AGG | 0.488687 | 1:+75259588 | None:intergenic |
| AAATTGAAACGCCCATGAGC+AGG | 0.504173 | 1:-75261432 | None:intergenic |
| TCCATGGACCATCTTCTACC+TGG | 0.506733 | 1:-75259624 | None:intergenic |
| CTGGAATTTCTTGCAGCATG+TGG | 0.508092 | 1:+75259653 | MsG0180004232.01.T01:CDS |
| CTAGTAAAGCAGGAGATCAA+TGG | 0.509667 | 1:+75260156 | MsG0180004232.01.T01:CDS |
| GAAAGTAGGAATAGCACTTA+CGG | 0.516631 | 1:+75259771 | MsG0180004232.01.T01:CDS |
| TAGTAAAGCAGGAGATCAAT+GGG | 0.520063 | 1:+75260157 | MsG0180004232.01.T01:CDS |
| GATGGTCCATGGAAGAGAGC+TGG | 0.527590 | 1:+75259634 | MsG0180004232.01.T01:CDS |
| AAAAGTGTAAACAGAATATG+TGG | 0.528989 | 1:+75260089 | MsG0180004232.01.T01:CDS |
| TAATAAATTCTGAAGCTCTA+GGG | 0.530295 | 1:-75261866 | None:intergenic |
| TACACCAAAGGCTAGAAGCC+CGG | 0.532274 | 1:-75260123 | None:intergenic |
| AAACCTTTATATGATGGTGT+TGG | 0.534000 | 1:+75259817 | MsG0180004232.01.T01:CDS |
| TGGAGAATCCAGGTAGAAGA+TGG | 0.550522 | 1:+75259616 | MsG0180004232.01.T01:CDS |
| CTATTCCTACTTTCAAACAA+TGG | 0.556799 | 1:-75259762 | None:intergenic |
| TATGTGGAACTACCCTTGCC+GGG | 0.557506 | 1:+75260105 | MsG0180004232.01.T01:CDS |
| TGGTATAAATCTTGAAAATG+TGG | 0.560638 | 1:-75260646 | None:intergenic |
| TGGAATTTCTTGCAGCATGT+GGG | 0.565529 | 1:+75259654 | MsG0180004232.01.T01:CDS |
| AATAATAGAATTAATTCAAG+TGG | 0.567797 | 1:+75261951 | MsG0180004232.01.T01:CDS |
| AAAGGCTAGAAGCCCGGCAA+GGG | 0.569854 | 1:-75260117 | None:intergenic |
| CTAGATGGGAGCCTGCTCAT+GGG | 0.572292 | 1:+75261421 | MsG0180004232.01.T01:CDS |
| GTAGTCTTTGAGTACACTGC+GGG | 0.575767 | 1:+75259874 | MsG0180004232.01.T01:CDS |
| TCCAGGTAGAAGATGGTCCA+TGG | 0.576984 | 1:+75259623 | MsG0180004232.01.T01:CDS |
| AAAGGTAGAATGGAGAATCC+AGG | 0.582137 | 1:+75259606 | MsG0180004232.01.T01:CDS |
| GTTCTAGACCAGCCCAAACA+GGG | 0.583021 | 1:-75260836 | None:intergenic |
| GTTGTCACCTACTTTCATAG+AGG | 0.589780 | 1:-75261749 | None:intergenic |
| TACTGAAATTGTAGCTCGTG+TGG | 0.591275 | 1:+75261993 | MsG0180004232.01.T01:CDS |
| AAACTCGCCAACTCTTTGCA+AGG | 0.594774 | 1:+75260888 | MsG0180004232.01.T01:CDS |
| AGCAGAACCTCTATGAAAGT+AGG | 0.598229 | 1:+75261742 | MsG0180004232.01.T01:CDS |
| CAAAGGCTAGAAGCCCGGCA+AGG | 0.602133 | 1:-75260118 | None:intergenic |
| TTGAAACCAAACTGAAAGTG+AGG | 0.606576 | 1:-75260710 | None:intergenic |
| TTGCATAAATTCAGAAAACA+AGG | 0.607863 | 1:+75261533 | MsG0180004232.01.T01:CDS |
| AAGAGTTGGCGAGTTTGTCG+AGG | 0.617634 | 1:-75260881 | None:intergenic |
| AATCTTCATGATGTCATCTG+AGG | 0.633279 | 1:-75261716 | None:intergenic |
| GTACTCAAAGACTACAATCA+CGG | 0.651714 | 1:-75259866 | None:intergenic |
| AGCAACCCAATGTACACCAA+AGG | 0.653502 | 1:-75260135 | None:intergenic |
| GTGTTGGAAGAAATGCTATG+TGG | 0.665026 | 1:+75259833 | MsG0180004232.01.T01:CDS |
| TGTTGGAAGAAATGCTATGT+GGG | 0.671135 | 1:+75259834 | MsG0180004232.01.T01:CDS |
| AGACCAACAGAATGATGAGG+AGG | 0.675708 | 1:+75262125 | MsG0180004232.01.T01:CDS |
| ACCAGACCAACAGAATGATG+AGG | 0.692301 | 1:+75262122 | MsG0180004232.01.T01:CDS |
| TGTAGTCTTTGAGTACACTG+CGG | 0.756186 | 1:+75259873 | MsG0180004232.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAATTAATTAATTA+AGG | - | Chr1:75261592-75261573 | None:intergenic | 0.0% |
| !! | TAATTATAATTTATAATTAT+TGG | + | Chr1:75261133-75261152 | MsG0180004232.01.T01:intron | 0.0% |
| !!! | AAATATTTGATTAGTTTTTA+GGG | - | Chr1:75261046-75261065 | None:intergenic | 10.0% |
| !! | AATAATAGAATTAATTCAAG+TGG | + | Chr1:75261951-75261970 | MsG0180004232.01.T01:CDS | 15.0% |
| !! | ACTTGAATTAATTCTATTAT+TGG | - | Chr1:75261952-75261971 | None:intergenic | 15.0% |
| !! | CCCTTAAATTAATTTATAAT+CGG | + | Chr1:75261314-75261333 | MsG0180004232.01.T01:intron | 15.0% |
| !! | CCGATTATAAATTAATTTAA+GGG | - | Chr1:75261317-75261336 | None:intergenic | 15.0% |
| !! | CTTGAATTAATTCTATTATT+GGG | - | Chr1:75261951-75261970 | None:intergenic | 15.0% |
| !! | TAGTATATATAAATATCACA+AGG | - | Chr1:75260040-75260059 | None:intergenic | 15.0% |
| !! | TAGTCATGTTATATAAATTA+GGG | - | Chr1:75261368-75261387 | None:intergenic | 15.0% |
| !! | TCCGATTATAAATTAATTTA+AGG | - | Chr1:75261318-75261337 | None:intergenic | 15.0% |
| !! | TTAGTCATGTTATATAAATT+AGG | - | Chr1:75261369-75261388 | None:intergenic | 15.0% |
| !!! | ATTAATATTTTGTTGATTTC+AGG | + | Chr1:75261389-75261408 | MsG0180004232.01.T01:intron | 15.0% |
| !!! | CAAATATTTGATTAGTTTTT+AGG | - | Chr1:75261047-75261066 | None:intergenic | 15.0% |
| !!! | TAAGTCATTACTATTATTTT+TGG | + | Chr1:75261597-75261616 | MsG0180004232.01.T01:intron | 15.0% |
| !! | AAGATTTATACCAACTATAA+AGG | + | Chr1:75260656-75260675 | MsG0180004232.01.T01:CDS | 20.0% |
| !! | AATTGATGAATTGTTTGATT+TGG | + | Chr1:75260746-75260765 | MsG0180004232.01.T01:CDS | 20.0% |
| !! | AGAATTTCCACTATTATAAT+TGG | + | Chr1:75260777-75260796 | MsG0180004232.01.T01:CDS | 20.0% |
| !! | GATGTATCTAGTTAAAAATT+TGG | + | Chr1:75260382-75260401 | MsG0180004232.01.T01:intron | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | + | Chr1:75260346-75260365 | MsG0180004232.01.T01:intron | 20.0% |
| !!! | ATTAGGGTTAAATATGTTTT+TGG | - | Chr1:75261352-75261371 | None:intergenic | 20.0% |
| !!! | TAAATTAATTTAAGGGTGTA+TGG | - | Chr1:75261310-75261329 | None:intergenic | 20.0% |
| !!! | TATACTATATGTTAATTTGC+AGG | + | Chr1:75260053-75260072 | MsG0180004232.01.T01:intron | 20.0% |
| ! | ACACAAAAAAATGCAAAAGA+AGG | + | Chr1:75261904-75261923 | MsG0180004232.01.T01:CDS | 25.0% |
| ! | ACATGTTAAGCAATTAAAAG+TGG | - | Chr1:75260999-75261018 | None:intergenic | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | - | Chr1:75260345-75260364 | None:intergenic | 25.0% |
| ! | CAAATTTGTGAAAAAAGCTT+GGG | + | Chr1:75259708-75259727 | MsG0180004232.01.T01:CDS | 25.0% |
| ! | CAATTCATCAATTCTATAAC+CGG | - | Chr1:75260739-75260758 | None:intergenic | 25.0% |
| ! | CCTAAATTTCTCTTGTAAAT+AGG | + | Chr1:75260429-75260448 | MsG0180004232.01.T01:intron | 25.0% |
| ! | CCTATTTACAAGAGAAATTT+AGG | - | Chr1:75260432-75260451 | None:intergenic | 25.0% |
| ! | GAGTCTAACAAAAATTTGAT+GGG | + | Chr1:75261210-75261229 | MsG0180004232.01.T01:CDS | 25.0% |
| ! | GCCAAATTTCTCTTATAAAT+AGG | - | Chr1:75260350-75260369 | None:intergenic | 25.0% |
| ! | GTATGGTAATTAAAATCTCT+AGG | - | Chr1:75261293-75261312 | None:intergenic | 25.0% |
| ! | TACCTATATACTTAATCTTG+AGG | + | Chr1:75261654-75261673 | MsG0180004232.01.T01:intron | 25.0% |
| ! | TACTTGAAACCTTTATATGA+TGG | + | Chr1:75259811-75259830 | MsG0180004232.01.T01:CDS | 25.0% |
| ! | TATAATTATTGGTACGTATG+TGG | + | Chr1:75261144-75261163 | MsG0180004232.01.T01:intron | 25.0% |
| ! | TCAACAAAAGTGAATGTATT+TGG | - | Chr1:75260409-75260428 | None:intergenic | 25.0% |
| ! | TGAAGTTCCAATTATAATAG+TGG | - | Chr1:75260787-75260806 | None:intergenic | 25.0% |
| ! | TGAGTCTAACAAAAATTTGA+TGG | + | Chr1:75261209-75261228 | MsG0180004232.01.T01:CDS | 25.0% |
| ! | TGGAAGCAATATCTTAAAAT+TGG | + | Chr1:75261465-75261484 | MsG0180004232.01.T01:CDS | 25.0% |
| ! | TGGTATAAATCTTGAAAATG+TGG | - | Chr1:75260649-75260668 | None:intergenic | 25.0% |
| ! | TTGCATAAATTCAGAAAACA+AGG | + | Chr1:75261533-75261552 | MsG0180004232.01.T01:CDS | 25.0% |
| !! | AAAAGTGTAAACAGAATATG+TGG | + | Chr1:75260089-75260108 | MsG0180004232.01.T01:CDS | 25.0% |
| !! | AAACAATGGATGAATTTTCT+AGG | - | Chr1:75259751-75259770 | None:intergenic | 25.0% |
| !! | AACAATGGATGAATTTTCTA+GGG | - | Chr1:75259750-75259769 | None:intergenic | 25.0% |
| !!! | ATTCACATTTTAACGAACTA+TGG | - | Chr1:75259913-75259932 | None:intergenic | 25.0% |
| !!! | ATTTTAAGATATTGCTTCCA+TGG | - | Chr1:75261465-75261484 | None:intergenic | 25.0% |
| !!! | ATTTTATTTAATACTCCCTC+CGG | + | Chr1:75260323-75260342 | MsG0180004232.01.T01:intron | 25.0% |
| !!! | TAATAAATTCTGAAGCTCTA+GGG | - | Chr1:75261869-75261888 | None:intergenic | 25.0% |
| !!! | TTAATAAATTCTGAAGCTCT+AGG | - | Chr1:75261870-75261889 | None:intergenic | 25.0% |
| !!! | TTTGCATTTTTTTGTGTGTT+TGG | - | Chr1:75261901-75261920 | None:intergenic | 25.0% |
| !!! | TTTTAAGATATTGCTTCCAT+GGG | - | Chr1:75261464-75261483 | None:intergenic | 25.0% |
| ATATTCAATGCACAAGTCTT+CGG | - | Chr1:75260926-75260945 | None:intergenic | 30.0% | |
| ATTTATCCTCACTTTCAGTT+TGG | + | Chr1:75260704-75260723 | MsG0180004232.01.T01:CDS | 30.0% | |
| ATTTCTCTTGTAAATAGGAC+CGG | + | Chr1:75260434-75260453 | MsG0180004232.01.T01:intron | 30.0% | |
| CAAAAAAATGCAAAAGAAGG+TGG | + | Chr1:75261907-75261926 | MsG0180004232.01.T01:CDS | 30.0% | |
| CTATTCCTACTTTCAAACAA+TGG | - | Chr1:75259765-75259784 | None:intergenic | 30.0% | |
| GCAAATTTGTGAAAAAAGCT+TGG | + | Chr1:75259707-75259726 | MsG0180004232.01.T01:CDS | 30.0% | |
| TGACTAATGAAAAGGTAGAA+TGG | + | Chr1:75259596-75259615 | MsG0180004232.01.T01:CDS | 30.0% | |
| TGCCTCAAGATTAAGTATAT+AGG | - | Chr1:75261659-75261678 | None:intergenic | 30.0% | |
| TTCATCCATTGTTTGAAAGT+AGG | + | Chr1:75259757-75259776 | MsG0180004232.01.T01:CDS | 30.0% | |
| TTGTCACATTTAGACATTTC+TGG | - | Chr1:75262069-75262088 | None:intergenic | 30.0% | |
| TTTACCTAGTAGAAAAAGTG+AGG | - | Chr1:75260201-75260220 | None:intergenic | 30.0% | |
| TTTCACAAATTTGCACAACT+TGG | - | Chr1:75259701-75259720 | None:intergenic | 30.0% | |
| ! | AAACCTTTATATGATGGTGT+TGG | + | Chr1:75259817-75259836 | MsG0180004232.01.T01:CDS | 30.0% |
| ! | GGTAATTAAAATCTCTAGGA+AGG | - | Chr1:75261289-75261308 | None:intergenic | 30.0% |
| ! | TTCAGTTTGGTTTCAATATC+CGG | + | Chr1:75260717-75260736 | MsG0180004232.01.T01:CDS | 30.0% |
| !! | TATTTCTGGTATTTACGTGT+CGG | + | Chr1:75260467-75260486 | MsG0180004232.01.T01:intron | 30.0% |
| !! | TCAAATTTTAACGTCTGCAA+GGG | - | Chr1:75259948-75259967 | None:intergenic | 30.0% |
| !!! | ATAAAGGCTCGTTTTGATTA+TGG | + | Chr1:75260672-75260691 | MsG0180004232.01.T01:CDS | 30.0% |
| AAAAATCAAGACACTCCAGA+TGG | + | Chr1:75262149-75262168 | MsG0180004232.01.T01:CDS | 35.0% | |
| AATCTTCATGATGTCATCTG+AGG | - | Chr1:75261719-75261738 | None:intergenic | 35.0% | |
| CAAAGCAACAGAAGAATCAT+TGG | + | Chr1:75261254-75261273 | MsG0180004232.01.T01:CDS | 35.0% | |
| CTTCCAACACCATCATATAA+AGG | - | Chr1:75259823-75259842 | None:intergenic | 35.0% | |
| GAAAGTAGGAATAGCACTTA+CGG | + | Chr1:75259771-75259790 | MsG0180004232.01.T01:CDS | 35.0% | |
| GTACTCAAAGACTACAATCA+CGG | - | Chr1:75259869-75259888 | None:intergenic | 35.0% | |
| TACACACTAGTTATCGATCT+TGG | + | Chr1:75260571-75260590 | MsG0180004232.01.T01:intron | 35.0% | |
| TAGTAAAGCAGGAGATCAAT+GGG | + | Chr1:75260157-75260176 | MsG0180004232.01.T01:CDS | 35.0% | |
| TCAAAACGAGCCTTTATAGT+TGG | - | Chr1:75260669-75260688 | None:intergenic | 35.0% | |
| TCAGGCTAATTTAGCTAGAT+GGG | + | Chr1:75261407-75261426 | MsG0180004232.01.T01:intron | 35.0% | |
| TGTTGGAAGAAATGCTATGT+GGG | + | Chr1:75259834-75259853 | MsG0180004232.01.T01:CDS | 35.0% | |
| TTCAGGCTAATTTAGCTAGA+TGG | + | Chr1:75261406-75261425 | MsG0180004232.01.T01:intron | 35.0% | |
| TTGAAACCAAACTGAAAGTG+AGG | - | Chr1:75260713-75260732 | None:intergenic | 35.0% | |
| ! | CAATGATTCTTCTGTTGCTT+TGG | - | Chr1:75261256-75261275 | None:intergenic | 35.0% |
| ! | TCTTGCATTGATGCTCTTAT+TGG | + | Chr1:75261510-75261529 | MsG0180004232.01.T01:CDS | 35.0% |
| !! | CTCAAATTTTAACGTCTGCA+AGG | - | Chr1:75259949-75259968 | None:intergenic | 35.0% |
| !! | TGGTCTAGAACTCTATGTTT+TGG | + | Chr1:75260848-75260867 | MsG0180004232.01.T01:CDS | 35.0% |
| !!! | AGAACTCTATGTTTTGGTCA+CGG | + | Chr1:75260854-75260873 | MsG0180004232.01.T01:CDS | 35.0% |
| AAAGGTAGAATGGAGAATCC+AGG | + | Chr1:75259606-75259625 | MsG0180004232.01.T01:CDS | 40.0% | |
| AGCAGAACCTCTATGAAAGT+AGG | + | Chr1:75261742-75261761 | MsG0180004232.01.T01:CDS | 40.0% | |
| CAATGGGAACCTGTAATTGT+TGG | + | Chr1:75260173-75260192 | MsG0180004232.01.T01:CDS | 40.0% | |
| CTAGTAAAGCAGGAGATCAA+TGG | + | Chr1:75260156-75260175 | MsG0180004232.01.T01:CDS | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | Chr1:75260341-75260360 | None:intergenic | 40.0% | |
| GTGAAAAAAGCTTGGGAGAT+TGG | + | Chr1:75259715-75259734 | MsG0180004232.01.T01:CDS | 40.0% | |
| GTGTTGGAAGAAATGCTATG+TGG | + | Chr1:75259833-75259852 | MsG0180004232.01.T01:CDS | 40.0% | |
| GTTGTCACCTACTTTCATAG+AGG | - | Chr1:75261752-75261771 | None:intergenic | 40.0% | |
| GTTGTCTGCTGAATGATGTT+TGG | - | Chr1:75262094-75262113 | None:intergenic | 40.0% | |
| TACTGAAATTGTAGCTCGTG+TGG | + | Chr1:75261993-75262012 | MsG0180004232.01.T01:CDS | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | Chr1:75260342-75260361 | None:intergenic | 40.0% | |
| TGGAATTTCTTGCAGCATGT+GGG | + | Chr1:75259654-75259673 | MsG0180004232.01.T01:CDS | 40.0% | |
| TGTAGTCTTTGAGTACACTG+CGG | + | Chr1:75259873-75259892 | MsG0180004232.01.T01:CDS | 40.0% | |
| ! | GTTTCAATTTTCGTCACCCA+TGG | + | Chr1:75261445-75261464 | MsG0180004232.01.T01:CDS | 40.0% |
| ! | TCTAGCCTTTGGTGTACATT+GGG | + | Chr1:75260130-75260149 | MsG0180004232.01.T01:CDS | 40.0% |
| ! | TTCTAGCCTTTGGTGTACAT+TGG | + | Chr1:75260129-75260148 | MsG0180004232.01.T01:CDS | 40.0% |
| !!! | AACGTCTGCAAGGGTATTTT+AGG | - | Chr1:75259939-75259958 | None:intergenic | 40.0% |
| !!! | GAACTCTATGTTTTGGTCAC+GGG | + | Chr1:75260855-75260874 | MsG0180004232.01.T01:CDS | 40.0% |
| AAACTCGCCAACTCTTTGCA+AGG | + | Chr1:75260888-75260907 | MsG0180004232.01.T01:CDS | 45.0% | |
| AAATTGAAACGCCCATGAGC+AGG | - | Chr1:75261435-75261454 | None:intergenic | 45.0% | |
| AAGCTGACCTTGCAAAGAGT+TGG | - | Chr1:75260898-75260917 | None:intergenic | 45.0% | |
| ACCAGACCAACAGAATGATG+AGG | + | Chr1:75262122-75262141 | MsG0180004232.01.T01:CDS | 45.0% | |
| AGACCAACAGAATGATGAGG+AGG | + | Chr1:75262125-75262144 | MsG0180004232.01.T01:CDS | 45.0% | |
| AGCAACCCAATGTACACCAA+AGG | - | Chr1:75260138-75260157 | None:intergenic | 45.0% | |
| AGTGAGGCTCCAACAATTAC+AGG | - | Chr1:75260185-75260204 | None:intergenic | 45.0% | |
| ATATGTGGAACTACCCTTGC+CGG | + | Chr1:75260104-75260123 | MsG0180004232.01.T01:CDS | 45.0% | |
| CCAGAAATAACTACTCCCTC+CGG | - | Chr1:75260456-75260475 | None:intergenic | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | + | Chr1:75260438-75260457 | MsG0180004232.01.T01:intron | 45.0% | |
| CTGGAATTTCTTGCAGCATG+TGG | + | Chr1:75259653-75259672 | MsG0180004232.01.T01:CDS | 45.0% | |
| GAAATTCCAGCTCTCTTCCA+TGG | - | Chr1:75259643-75259662 | None:intergenic | 45.0% | |
| GTAGTCTTTGAGTACACTGC+GGG | + | Chr1:75259874-75259893 | MsG0180004232.01.T01:CDS | 45.0% | |
| TATTGGTACGTATGTGGTGC+AGG | + | Chr1:75261150-75261169 | MsG0180004232.01.T01:intron | 45.0% | |
| TCCTCATCATTCTGTTGGTC+TGG | - | Chr1:75262126-75262145 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | + | Chr1:75260437-75260456 | MsG0180004232.01.T01:intron | 45.0% | |
| TGGAGAATCCAGGTAGAAGA+TGG | + | Chr1:75259616-75259635 | MsG0180004232.01.T01:CDS | 45.0% | |
| TTGCCTCCTCATCATTCTGT+TGG | - | Chr1:75262131-75262150 | None:intergenic | 45.0% | |
| ! | CATTGGGTTGCTAGTAAAGC+AGG | + | Chr1:75260146-75260165 | MsG0180004232.01.T01:CDS | 45.0% |
| ! | GTTAGACTCACTTGCTGCTT+GGG | - | Chr1:75261199-75261218 | None:intergenic | 45.0% |
| ! | TGTTAGACTCACTTGCTGCT+TGG | - | Chr1:75261200-75261219 | None:intergenic | 45.0% |
| !! | GTATTTACGTGTCGGTGTCA+TGG | + | Chr1:75260475-75260494 | MsG0180004232.01.T01:intron | 45.0% |
| !!! | GGAGCCTCACTTTTTCTACT+AGG | + | Chr1:75260194-75260213 | MsG0180004232.01.T01:CDS | 45.0% |
| !!! | TGTAAAATTAATAAATTTTT+AGG | - | Chr1:75261624-75261643 | None:intergenic | 5.0% |
| AAGAGTTGGCGAGTTTGTCG+AGG | - | Chr1:75260884-75260903 | None:intergenic | 50.0% | |
| TACACCAAAGGCTAGAAGCC+CGG | - | Chr1:75260126-75260145 | None:intergenic | 50.0% | |
| TATGTGGAACTACCCTTGCC+GGG | + | Chr1:75260105-75260124 | MsG0180004232.01.T01:CDS | 50.0% | |
| TCCAGGTAGAAGATGGTCCA+TGG | + | Chr1:75259623-75259642 | MsG0180004232.01.T01:CDS | 50.0% | |
| TCCATGGACCATCTTCTACC+TGG | - | Chr1:75259627-75259646 | None:intergenic | 50.0% | |
| ! | CCGGAGGGAGTAGTTATTTC+TGG | + | Chr1:75260453-75260472 | MsG0180004232.01.T01:intron | 50.0% |
| ! | GTTCTAGACCAGCCCAAACA+GGG | - | Chr1:75260839-75260858 | None:intergenic | 50.0% |
| !! | AGTTCTAGACCAGCCCAAAC+AGG | - | Chr1:75260840-75260859 | None:intergenic | 50.0% |
| !! | TTACGTGTCGGTGTCATGGT+TGG | + | Chr1:75260479-75260498 | MsG0180004232.01.T01:intron | 50.0% |
| AAAGGCTAGAAGCCCGGCAA+GGG | - | Chr1:75260120-75260139 | None:intergenic | 55.0% | |
| CACGACTGTTCGCCCTGTTT+GGG | + | Chr1:75260824-75260843 | MsG0180004232.01.T01:CDS | 55.0% | |
| CTAGATGGGAGCCTGCTCAT+GGG | + | Chr1:75261421-75261440 | MsG0180004232.01.T01:CDS | 55.0% | |
| GATGGTCCATGGAAGAGAGC+TGG | + | Chr1:75259634-75259653 | MsG0180004232.01.T01:CDS | 55.0% | |
| ACTGTTCGCCCTGTTTGGGC+TGG | + | Chr1:75260828-75260847 | MsG0180004232.01.T01:CDS | 60.0% | |
| CAAAGGCTAGAAGCCCGGCA+AGG | - | Chr1:75260121-75260140 | None:intergenic | 60.0% | |
| GCACGACTGTTCGCCCTGTT+TGG | + | Chr1:75260823-75260842 | MsG0180004232.01.T01:CDS | 60.0% | |
| GCTAGATGGGAGCCTGCTCA+TGG | + | Chr1:75261420-75261439 | MsG0180004232.01.T01:CDS | 60.0% | |
| ! | CTTGCCGGGCTTCTAGCCTT+TGG | + | Chr1:75260119-75260138 | MsG0180004232.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 75259595 | 75262176 | 75259595 | ID=MsG0180004232.01;Name=MsG0180004232.01 |
| Chr1 | mRNA | 75259595 | 75262176 | 75259595 | ID=MsG0180004232.01.T01;Parent=MsG0180004232.01;Name=MsG0180004232.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|6|0|474 |
| Chr1 | exon | 75259595 | 75259895 | 75259595 | ID=MsG0180004232.01.T01:exon:31776;Parent=MsG0180004232.01.T01 |
| Chr1 | exon | 75260075 | 75260215 | 75260075 | ID=MsG0180004232.01.T01:exon:31777;Parent=MsG0180004232.01.T01 |
| Chr1 | exon | 75260637 | 75260909 | 75260637 | ID=MsG0180004232.01.T01:exon:31778;Parent=MsG0180004232.01.T01 |
| Chr1 | exon | 75261172 | 75261275 | 75261172 | ID=MsG0180004232.01.T01:exon:31779;Parent=MsG0180004232.01.T01 |
| Chr1 | exon | 75261411 | 75261554 | 75261411 | ID=MsG0180004232.01.T01:exon:31780;Parent=MsG0180004232.01.T01 |
| Chr1 | exon | 75261715 | 75262176 | 75261715 | ID=MsG0180004232.01.T01:exon:31781;Parent=MsG0180004232.01.T01 |
| Chr1 | CDS | 75259595 | 75259895 | 75259595 | ID=MsG0180004232.01.T01:cds;Parent=MsG0180004232.01.T01 |
| Chr1 | CDS | 75260075 | 75260215 | 75260075 | ID=MsG0180004232.01.T01:cds;Parent=MsG0180004232.01.T01 |
| Chr1 | CDS | 75260637 | 75260909 | 75260637 | ID=MsG0180004232.01.T01:cds;Parent=MsG0180004232.01.T01 |
| Chr1 | CDS | 75261172 | 75261275 | 75261172 | ID=MsG0180004232.01.T01:cds;Parent=MsG0180004232.01.T01 |
| Chr1 | CDS | 75261411 | 75261554 | 75261411 | ID=MsG0180004232.01.T01:cds;Parent=MsG0180004232.01.T01 |
| Chr1 | CDS | 75261715 | 75262176 | 75261715 | ID=MsG0180004232.01.T01:cds;Parent=MsG0180004232.01.T01 |
| Gene Sequence |
| Protein sequence |
